chr1	Wallace_2014	SNP	46862	46961	.	+	.	Name=Nitrate;B73v2_pos=1:10510;1allele=A/T;version=Hapmap2;RS=rs131190528;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	664484	664583	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:629517;1allele=C/A;version=Hapmap2;RS=rs727480858;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	1810885	1810984	.	+	.	Name=Starch;B73v2_pos=1:1766195;1allele=C/T;version=Hapmap2;RS=rs806795305;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	1858021	1858120	.	+	.	Name=Starch;B73v2_pos=1:1813332;1allele=G/A;version=Hapmap2;RS=rs803487476;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	1948632	1948731	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:1894116;1allele=C/T;version=Hapmap2;RS=rs808152960;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	2014208	2014307	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:1959512;1allele=G/A;version=Hapmap2;RS=rs837855500;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	2036375	2036474	.	+	.	Name=Tassel_length;B73v2_pos=1:1997271;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	2073244	2073343	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:2019379;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	2108697	2108796	.	+	.	Name=Starch;B73v2_pos=1:2051426;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	2491552	2491651	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:2405011;1allele=C/T;version=Hapmap2;RS=rs814248216;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	2555501	2555600	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:2468975;1allele=T/A;version=Hapmap1;RS=rs131191779;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	2627451	2627550	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:2545300;1allele=G/A;version=Hapmap2;RS=rs842512623;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	2735811	2735910	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:2656017;1allele=C/T;version=Hapmap2;RS=rs835808324;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	2736850	2736949	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:2657056;1allele=G/C;version=Hapmap2;RS=rs726444484;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	2808696	2808795	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:2791846;1allele=T/C;version=Hapmap2;RS=rs817829784;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	2816287	2816386	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:2799428;1allele=T/C;version=Hapmap2;RS=rs805133054;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	2828440	2828539	.	+	.	Name=Starch;B73v2_pos=1:2813372;1allele=A/C;version=Hapmap2;RS=rs819016747;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	2963870	2963969	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:2872090;1allele=C/T;version=Hapmap2;RS=rs276178948;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	3028237	3028336	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:2942391;1allele=T/A;version=Hapmap1;RS=rs55622499;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	3028510	3028609	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:2942664;1allele=G/A;version=Hapmap2;RS=rs128359695;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	3089697	3089796	.	+	.	Name=Tassel_length;B73v2_pos=1:3003858;1allele=T/C;version=Hapmap2;RS=rs838489997;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	3163169	3163268	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:3077574;1allele=A/G;version=Hapmap2;RS=rs815608433;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	3264877	3264976	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:3180246;1allele=T/C;version=Hapmap2;RS=rs801846652;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	3474376	3474475	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:3368555;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	3478924	3479023	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:3364007;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	3490196	3490295	.	+	.	Name=Leaf_width;B73v2_pos=1:3352785;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	3516004	3516103	.	+	.	Name=Starch;B73v2_pos=1:3431982;1allele=C/T;version=Hapmap2;RS=rs840359822;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	3521758	3521857	.	+	.	Name=Starch;B73v2_pos=1:3437736;1allele=T/C;version=Hapmap2;RS=rs131193554;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	3530617	3530716	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:3446595;1allele=-/+;version=Hapmap2;RS=rs276180194;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	3734810	3734909	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:3665353;1allele=/ACC;version=Hapmap1;RS=rs831357096;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	3789638	3789737	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:3701524;1allele=G/A;version=Hapmap2;RS=rs815476254;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	3797400	3797499	.	+	.	Name=Starch;B73v2_pos=1:3709286;1allele=G/A;version=Hapmap2;RS=rs276180548;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	3894734	3894833	.	+	.	Name=Starch;B73v2_pos=1:3821438;1allele=A/C;version=Hapmap2;RS=rs826424474;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	3910871	3910970	.	+	.	Name=Starch;B73v2_pos=1:3837575;1allele=T/C;version=Hapmap2;RS=rs128361291;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	4010035	4010134	.	+	.	Name=Starch;B73v2_pos=1:3938170;1allele=A/G;version=Hapmap2;RS=rs807504025;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	4033768	4033867	.	+	.	Name=Starch;B73v2_pos=1:3963827;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	4105228	4105327	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:4056076;1allele=C/G;version=Hapmap1;RS=rs131194658;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	4105253	4105352	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:4056101;1allele=G/C;version=Hapmap1;RS=rs131194661;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	4105302	4105401	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:4056150;1allele=CT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	4105397	4105496	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:4056245;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	4112393	4112492	.	+	.	Name=Starch;B73v2_pos=1:4063239;1allele=T/C;version=Hapmap2;RS=rs812091580;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	4133793	4133892	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:4084638;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	4182054	4182153	.	+	.	Name=Starch;B73v2_pos=1:4127749;1allele=C/T;version=Hapmap2;RS=rs726576786;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	4301302	4301401	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:4249227;1allele=A/G;version=Hapmap2;RS=rs804240144;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	4446832	4446931	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:4352849;1allele=+/-;version=Hapmap2;RS=rs826443340;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	4450543	4450642	.	+	.	Name=Cob_diameter;B73v2_pos=1:4356560;1allele=C/T;version=Hapmap2;RS=rs128362583;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	4487806	4487905	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:4443604;1allele=C/T;version=Hapmap2;RS=rs831229343;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	4611052	4611151	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:4544207;1allele=C/G;version=Hapmap2;RS=rs276182185;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	4618433	4618532	.	+	.	Name=Starch;B73v2_pos=1:4551678;1allele=G/T;version=Hapmap2;RS=rs276182197;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	4619937	4620036	.	+	.	Name=Starch;B73v2_pos=1:4553182;1allele=G/A;version=Hapmap2;RS=rs276182217;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	4620965	4621064	.	+	.	Name=Starch;B73v2_pos=1:4554210;1allele=G/C;version=Hapmap2;RS=rs276182225;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	4673068	4673167	.	+	.	Name=Starch;B73v2_pos=1:4602061;1allele=C/G;version=Hapmap2;RS=rs839206021;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	4675655	4675754	.	+	.	Name=Cob_diameter;B73v2_pos=1:4604648;1allele=C/T;version=Hapmap2;RS=rs128362674;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	4798853	4798952	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:4728190;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	4848617	4848716	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:4752894;1allele=C/G;version=Hapmap1;RS=rs841408809;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	4851277	4851376	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:4755554;1allele=A/G;version=Hapmap2;RS=rs809581514;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	4851483	4851582	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:4755760;1allele=T/C;version=Hapmap2;RS=rs131196375;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	4860412	4860511	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:4764689;1allele=C/T;version=Hapmap2;RS=rs276182594;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	4861070	4861169	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:4765347;1allele=G/T;version=Hapmap2;RS=rs821558745;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	4877202	4877301	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:4804299;1allele=A/T;version=Hapmap2;RS=rs131196517;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	5062124	5062223	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:4995092;1allele=T/C;version=Hapmap2;RS=rs128363523;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5063405	5063504	.	+	.	Name=Ear_height;B73v2_pos=1:4996373;1allele=/GCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5068906	5069005	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:5001874;1allele=T/C;version=Hapmap2;RS=rs276182880;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5069509	5069608	.	+	.	Name=Ear_height;B73v2_pos=1:5002477;1allele=T/C;version=Hapmap2;RS=rs276182890;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5069509	5069608	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:5002477;1allele=T/C;version=Hapmap2;RS=rs276182890;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5069509	5069608	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5002477;1allele=T/C;version=Hapmap2;RS=rs276182890;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5070062	5070161	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:5003030;1allele=C/A;version=Hapmap2;RS=rs276182895;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	5073167	5073266	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5006135;1allele=TGGC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5073239	5073338	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:5006207;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5073239	5073338	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5006207;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5075326	5075425	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:5008294;1allele=T/G;version=Hapmap1;RS=rs131196808;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	5075944	5076043	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:5008912;1allele=C/T;version=Hapmap1;RS=rs131196825;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5076954	5077053	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:5009918;1allele=G/A;version=Hapmap1;RS=rs131196856;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	5089531	5089630	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:5022499;1allele=T/G;version=Hapmap2;RS=rs131196946;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	5090158	5090257	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:5023126;1allele=/AGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5124749	5124848	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:5057718;1allele=T/C;version=Hapmap1;RS=rs131197159;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5156208	5156307	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:5087303;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5159729	5159828	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5090824;1allele=T/C;version=Hapmap2;RS=rs802412086;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5280713	5280812	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5243722;1allele=C/T;version=Hapmap2;RS=rs834485616;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5285362	5285461	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5248371;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5285362	5285461	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:5248371;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5292278	5292377	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:5255287;1allele=A/G;version=Hapmap2;RS=rs276183342;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	5341637	5341736	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:5302266;1allele=C/G;version=Hapmap2;RS=rs808068992;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	5353672	5353771	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5314302;1allele=A/G;version=Hapmap2;RS=rs845752993;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	5383539	5383638	.	+	.	Name=Tassel_length;B73v2_pos=1:5344126;1allele=/CCTCGA;version=Hapmap1;RS=rs131197582;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	5418849	5418948	.	+	.	Name=Ear_height;B73v2_pos=1:5381695;1allele=C/T;version=Hapmap2;RS=rs817256242;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5419874	5419973	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:5382719;1allele=T/C;version=Hapmap2;RS=rs276183695;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5420693	5420792	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:5383538;1allele=G/A;version=Hapmap1;RS=rs131197762;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	5420693	5420792	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:5383538;1allele=G/C;version=Hapmap2;RS=rs131197762;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	5420695	5420794	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:5383540;1allele=A/T;version=Hapmap1;RS=rs131197763;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	5421313	5421412	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5384158;1allele=A/C;version=Hapmap2;RS=rs276183700;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	5422389	5422488	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:5385234;1allele=C/A;version=Hapmap2;RS=rs128364146;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	5422905	5423004	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5385750;1allele=G/A;version=Hapmap1;RS=rs131197772;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	5425223	5425322	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5388068;1allele=T/A;version=Hapmap2;RS=rs276183727;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5475675	5475774	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:5438519;1allele=G/A;version=Hapmap2;RS=rs847446931;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	5476827	5476926	.	+	.	Name=Cob_diameter;B73v2_pos=1:5439671;1allele=C/A;version=Hapmap2;RS=rs836537064;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	5479424	5479523	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5442268;1allele=T/C;version=Hapmap2;RS=rs128364374;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5544424	5544523	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5518930;1allele=T/G;version=Hapmap2;RS=rs131198010;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5553283	5553382	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5527785;1allele=C/G;version=Hapmap2;RS=rs850457119;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	5554340	5554439	.	+	.	Name=Leaf_width;B73v2_pos=1:5528842;1allele=C/T;version=Hapmap1;RS=rs131198075;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5555622	5555721	.	+	.	Name=Leaf_width;B73v2_pos=1:5530124;1allele=T/G;version=Hapmap2;RS=rs131198086;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	5563616	5563715	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5538118;1allele=C/T;version=Hapmap2;RS=rs828207491;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5566707	5566806	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5541209;1allele=T/C;version=Hapmap2;RS=rs845986319;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5567687	5567786	.	+	.	Name=Nitrate;B73v2_pos=1:5542187;1allele=T/G;version=Hapmap2;RS=rs839539419;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	5592041	5592140	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5566139;1allele=C/T;version=Hapmap2;RS=rs809105840;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5596384	5596483	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5570482;1allele=A/T;version=Hapmap2;RS=rs810491239;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	5596427	5596526	.	+	.	Name=Plant_height;B73v2_pos=1:5570525;1allele=G/C;version=Hapmap2;RS=rs836935882;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	5596440	5596539	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5570538;1allele=G/A;version=Hapmap2;RS=rs848212882;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	5605674	5605773	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5579776;1allele=G/A;version=Hapmap2;RS=rs840149881;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	5606428	5606527	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:5580530;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5606976	5607075	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5581078;1allele=A/G;version=Hapmap2;RS=rs805623401;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	5608977	5609076	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5583079;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5610762	5610861	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:5584864;1allele=C/A;version=Hapmap2;RS=rs811013492;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	5610781	5610880	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5584883;1allele=G/A;version=Hapmap2;RS=rs808633431;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	5610898	5610997	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5585000;1allele=C/T;version=Hapmap2;RS=rs829795269;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5614869	5614968	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:5588971;1allele=A/T;version=Hapmap2;RS=rs817626590;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	5615576	5615675	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5589678;1allele=A/G;version=Hapmap2;RS=rs131198260;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	5634290	5634389	.	+	.	Name=Cob_diameter;B73v2_pos=1:5611010;1allele=C/T;version=Hapmap2;RS=rs128364639;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	5646188	5646287	.	+	.	Name=Cob_diameter;B73v2_pos=1:5622919;1allele=A/C;version=Hapmap2;RS=rs276184088;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	5652077	5652176	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5628808;1allele=A/G;version=Hapmap1;RS=rs131198383;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	5652111	5652210	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5628842;1allele=C/-;version=Hapmap1;RS=rs131198386;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5654073	5654172	.	+	.	Name=Plant_height;B73v2_pos=1:5630804;1allele=A/G;version=Hapmap2;RS=rs802437485;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	5656055	5656154	.	+	.	Name=Starch;B73v2_pos=1:5632786;1allele=A/G;version=Hapmap2;RS=rs844508536;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	5692617	5692716	.	+	.	Name=Cob_diameter;B73v2_pos=1:5669347;1allele=T/G;version=Hapmap2;RS=rs1061945022;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	5750243	5750342	.	+	.	Name=Nitrate;B73v2_pos=1:5726183;1allele=C/T;version=Hapmap2;RS=rs726459910;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	5754004	5754103	.	+	.	Name=Nitrate;B73v2_pos=1:5728606;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5760141	5760240	.	+	.	Name=Nitrate;B73v2_pos=1:5734743;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5768863	5768962	.	+	.	Name=Starch;B73v2_pos=1:5743466;1allele=C/T;version=Hapmap1;RS=rs131198923;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	5777681	5777780	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:5752284;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5835169	5835268	.	+	.	Name=Starch;B73v2_pos=1:5808142;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	5837552	5837651	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:5810525;1allele=C/A;version=Hapmap1;RS=rs131198753;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	5841557	5841656	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:5814530;1allele=T/G;version=Hapmap2;RS=rs276184764;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	5841854	5841953	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:5814827;1allele=A/T;version=Hapmap2;RS=rs128364837;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	5902631	5902730	.	+	.	Name=Nitrate;B73v2_pos=1:5879056;1allele=C/T;version=Hapmap2;RS=rs841009679;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	6116960	6117059	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:6086990;1allele=C/T;version=Hapmap2;RS=rs831942196;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	6126316	6126415	.	+	.	Name=Nitrate;B73v2_pos=1:6164159;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	6192961	6193060	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:6157253;1allele=C/G;version=Hapmap2;RS=rs131199316;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	6194423	6194522	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:6158715;1allele=C/A;version=Hapmap2;RS=rs833254928;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	6205196	6205295	.	+	.	Name=Nitrate;B73v2_pos=1:6175756;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	6205349	6205448	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:6175909;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	6213428	6213527	.	+	.	Name=Leaf_width;B73v2_pos=1:276291549;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	6228296	6228395	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:6198856;1allele=C/T;version=Hapmap2;RS=rs131185987;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	6242581	6242680	.	+	.	Name=Starch;B73v2_pos=1:6213144;1allele=C/A;version=Hapmap2;RS=rs846450868;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	6264574	6264673	.	+	.	Name=Cob_diameter;B73v2_pos=1:6235137;1allele=G/T;version=Hapmap2;RS=rs128365897;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	6264827	6264926	.	+	.	Name=Plant_height;B73v2_pos=1:6235390;1allele=C/G;version=Hapmap2;RS=rs726219657;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	6267717	6267816	.	+	.	Name=Cob_diameter;B73v2_pos=1:6238280;1allele=G/C;version=Hapmap2;RS=rs817425260;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	6269754	6269853	.	+	.	Name=Starch;B73v2_pos=1:6240317;1allele=C/T;version=Hapmap2;RS=rs835863154;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	6270848	6270947	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:6241411;1allele=C/T;version=Hapmap2;RS=rs131199904;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	6272459	6272558	.	+	.	Name=Cob_diameter;B73v2_pos=1:6243022;1allele=C/T;version=Hapmap2;RS=rs835780027;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	6272875	6272974	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:6243438;1allele=G/T;version=Hapmap2;RS=rs131199944;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	6374137	6374236	.	+	.	Name=Ear_height;B73v2_pos=1:6424418;1allele=C/A;version=Hapmap2;RS=rs833387252;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	6377276	6377375	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:6427557;1allele=G/A;version=Hapmap2;RS=rs819701662;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	6377276	6377375	.	+	.	Name=Ear_height;B73v2_pos=1:6427557;1allele=G/A;version=Hapmap2;RS=rs819701662;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	6481625	6481724	.	+	.	Name=Starch;B73v2_pos=1:6535941;1allele=G/T;version=Hapmap2;RS=rs813404156;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	6606450	6606549	.	+	.	Name=Plant_height;B73v2_pos=1:6635128;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	6741913	6742012	.	+	.	Name=Ear_height;B73v2_pos=1:6800177;1allele=G/A;version=Hapmap2;RS=rs835561304;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	6741984	6742083	.	+	.	Name=Ear_height;B73v2_pos=1:6800248;1allele=T/C;version=Hapmap2;RS=rs814998289;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	6742503	6742602	.	+	.	Name=Ear_height;B73v2_pos=1:6800767;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	6856689	6856788	.	+	.	Name=Ear_height;B73v2_pos=1:6917072;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	6892585	6892684	.	+	.	Name=Ear_height;B73v2_pos=1:6987726;1allele=A/G;version=Hapmap2;RS=rs818297790;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	6892585	6892684	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:6987726;1allele=A/G;version=Hapmap2;RS=rs818297790;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	6979532	6979631	.	+	.	Name=Cob_diameter;B73v2_pos=1:7038945;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	7018360	7018459	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:7077505;1allele=A/C;version=Hapmap2;RS=rs805066373;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	7098709	7098808	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:7161616;1allele=G/A;version=Hapmap1;RS=rs131201422;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	7100083	7100182	.	+	.	Name=Starch;B73v2_pos=1:7162990;1allele=C/T;version=Hapmap2;RS=rs839426462;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7102647	7102746	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:7165554;1allele=T/G;version=Hapmap2;RS=rs128367128;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	7102776	7102875	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:7165683;1allele=G/A;version=Hapmap2;RS=rs128367131;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	7105849	7105948	.	+	.	Name=Plant_height;B73v2_pos=1:7168756;1allele=C/T;version=Hapmap2;RS=rs839313338;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7178260	7178359	.	+	.	Name=Leaf_length;B73v2_pos=1:7240780;1allele=A/G;version=Hapmap2;RS=rs1061627861;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	7227826	7227925	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:7290355;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	7338663	7338762	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:7398092;1allele=C/T;version=Hapmap2;RS=rs131201989;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7339982	7340081	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:7399411;1allele=G/A;version=Hapmap2;RS=rs128367918;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	7344816	7344915	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:7404245;1allele=A/G;version=Hapmap1;RS=rs128367881;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	7345190	7345289	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:7404619;1allele=C/T;version=Hapmap1;RS=rs131201908;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	7345432	7345531	.	+	.	Name=Plant_height;B73v2_pos=1:7404861;1allele=T/C;version=Hapmap2;RS=rs832703128;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	7346369	7346468	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:7405798;1allele=C/T;version=Hapmap2;RS=rs805143448;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7360633	7360732	.	+	.	Name=Ear_height;B73v2_pos=1:7429386;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	7369965	7370064	.	+	.	Name=Plant_height;B73v2_pos=1:7420053;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	7433683	7433782	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:7489552;1allele=C/T;version=Hapmap2;RS=rs833436500;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7434023	7434122	.	+	.	Name=Cob_diameter;B73v2_pos=1:7489892;1allele=G/A;version=Hapmap2;RS=rs820344010;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	7434164	7434263	.	+	.	Name=Cob_diameter;B73v2_pos=1:7490033;1allele=A/G;version=Hapmap1;RS=rs131202341;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	7434497	7434596	.	+	.	Name=Ear_height;B73v2_pos=1:7490366;1allele=/GCGCAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	7438143	7438242	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:7494012;1allele=CTT/;version=Hapmap1;RS=rs826232135;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	7461307	7461406	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:7520819;1allele=C/T;version=Hapmap2;RS=rs846776569;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7489322	7489421	.	+	.	Name=Cob_diameter;B73v2_pos=1:7549060;1allele=C/G;version=Hapmap2;RS=rs837417267;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	7506411	7506510	.	+	.	Name=Ear_height;B73v2_pos=1:7565570;1allele=T/G;version=Hapmap2;RS=rs846047708;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	7508766	7508865	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:7567925;1allele=G/A;version=Hapmap2;RS=rs131202468;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	7510404	7510503	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:7569563;1allele=G/T;version=Hapmap2;RS=rs276188608;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	7640256	7640355	.	+	.	Name=Tassel_length;B73v2_pos=1:7688352;1allele=C/A;version=Hapmap2;RS=rs276189085;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	7647674	7647773	.	+	.	Name=Tassel_length;B73v2_pos=1:7695770;1allele=T/C;version=Hapmap2;RS=rs276189123;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	7669997	7670096	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:7718125;1allele=G/A;version=Hapmap2;RS=rs131202703;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	7815181	7815280	.	+	.	Name=Plant_height;B73v2_pos=1:7861245;1allele=T/C;version=Hapmap2;RS=rs830578798;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	7886389	7886488	.	+	.	Name=Ear_height;B73v2_pos=1:7929326;1allele=G/C;version=Hapmap2;RS=rs826751437;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	7893884	7893983	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:7936821;1allele=G/A;version=Hapmap2;RS=rs848903393;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	7915022	7915121	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:7957959;1allele=T/G;version=Hapmap2;RS=rs276189638;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	7915379	7915478	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:7958316;1allele=A/G;version=Hapmap2;RS=rs836529960;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	7915562	7915661	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:7958499;1allele=A/G;version=Hapmap2;RS=rs811328848;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	7916335	7916434	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:7959272;1allele=G/A;version=Hapmap2;RS=rs276189657;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	7919101	7919200	.	+	.	Name=Leaf_length;B73v2_pos=1:7962038;1allele=C/T;version=Hapmap2;RS=rs816219822;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7920789	7920888	.	+	.	Name=Ear_height;B73v2_pos=1:7963726;1allele=G/C;version=Hapmap2;RS=rs832431594;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	7920789	7920888	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:7963726;1allele=G/C;version=Hapmap2;RS=rs832431594;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	7921357	7921456	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:7964294;1allele=C/T;version=Hapmap2;RS=rs811422127;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7921357	7921456	.	+	.	Name=Ear_height;B73v2_pos=1:7964294;1allele=C/T;version=Hapmap2;RS=rs811422127;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	7975657	7975756	.	+	.	Name=Ear_height;B73v2_pos=1:8024345;1allele=T/G;version=Hapmap2;RS=rs726339840;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	7977594	7977693	.	+	.	Name=Cob_diameter;B73v2_pos=1:8026282;1allele=G/A;version=Hapmap2;RS=rs276189867;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	7980937	7981036	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:8029625;1allele=G/C;version=Hapmap2;RS=rs276189890;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	7981508	7981607	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:8030196;1allele=G/T;version=Hapmap1;RS=rs131203102;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	7981508	7981607	.	+	.	Name=Ear_height;B73v2_pos=1:8030196;1allele=G/T;version=Hapmap2;RS=rs131203102;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	7990748	7990847	.	+	.	Name=Cob_diameter;B73v2_pos=1:8039436;1allele=/GGGCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8090099	8090198	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:8138409;1allele=A/G;version=Hapmap2;RS=rs727050890;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	8220804	8220903	.	+	.	Name=Cob_diameter;B73v2_pos=1:8269525;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8223476	8223575	.	+	.	Name=Cob_diameter;B73v2_pos=1:8272199;1allele=G/A;version=Hapmap2;RS=rs128369265;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	8226454	8226553	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:8275177;1allele=C/G;version=Hapmap2;RS=rs131203440;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	8226454	8226553	.	+	.	Name=Ear_height;B73v2_pos=1:8275177;1allele=C/G;version=Hapmap2;RS=rs131203440;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	8325062	8325161	.	+	.	Name=Cob_diameter;B73v2_pos=1:8369625;1allele=T/C;version=Hapmap2;RS=rs276190388;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	8356168	8356267	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:8401259;1allele=/TTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8373760	8373859	.	+	.	Name=Plant_height;B73v2_pos=1:8383656;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8428839	8428938	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:8455238;1allele=A/C;version=Hapmap2;RS=rs131203728;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	8435337	8435436	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:8461736;1allele=A/C;version=Hapmap2;RS=rs844309067;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	8452287	8452386	.	+	.	Name=Cob_diameter;B73v2_pos=1:8479131;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8487306	8487405	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:8514168;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8547751	8547850	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:8573395;1allele=A/T;version=Hapmap2;RS=rs128369767;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	8547849	8547948	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:8573493;1allele=T/G;version=Hapmap2;RS=rs844453523;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	8597560	8597659	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:8617044;1allele=C/A;version=Hapmap2;RS=rs844883419;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	8600318	8600417	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:8619802;1allele=C/G;version=Hapmap2;RS=rs131204040;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	8616397	8616496	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:8635881;1allele=T/C;version=Hapmap1;RS=rs131204395;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	8620677	8620776	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:8640160;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8621205	8621304	.	+	.	Name=Cob_diameter;B73v2_pos=1:8640688;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8635652	8635751	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:8655135;1allele=A/G;version=Hapmap2;RS=rs1062722353;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	8708698	8708797	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:8740024;1allele=C/T;version=Hapmap2;RS=rs833680145;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	8710743	8710842	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:8742069;1allele=G/T;version=Hapmap2;RS=rs276191110;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	8712907	8713006	.	+	.	Name=Ear_height;B73v2_pos=1:8744233;1allele=A/T;version=Hapmap2;RS=rs276191124;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	8729677	8729776	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:8762871;1allele=C/T;version=Hapmap2;RS=rs726954656;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	8729677	8729776	.	+	.	Name=Plant_height;B73v2_pos=1:8762871;1allele=C/T;version=Hapmap2;RS=rs726954656;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	8734750	8734849	.	+	.	Name=Cob_diameter;B73v2_pos=1:8767844;1allele=G/T;version=Hapmap2;RS=rs276191309;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	8771816	8771915	.	+	.	Name=Cob_diameter;B73v2_pos=1:8804914;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8838047	8838146	.	+	.	Name=Cob_diameter;B73v2_pos=1:8854888;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	8857188	8857287	.	+	.	Name=Plant_height;B73v2_pos=1:8885055;1allele=T/C;version=Hapmap2;RS=rs818941154;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	8857955	8858054	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:8885822;1allele=A/G;version=Hapmap2;RS=rs276191472;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	8876134	8876233	.	+	.	Name=Cob_diameter;B73v2_pos=1:8903983;1allele=G/A;version=Hapmap2;RS=rs1061530837;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	8876889	8876988	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:8904738;1allele=C/T;version=Hapmap2;RS=rs843051757;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	8903846	8903945	.	+	.	Name=Ear_height;B73v2_pos=1:8931698;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	9064722	9064821	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:9096785;1allele=/CG;version=Hapmap1;RS=rs807015463;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	9069051	9069150	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:9092233;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	9071244	9071343	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9100199;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	9097265	9097364	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:9123909;1allele=G/T;version=Hapmap2;RS=rs131205114;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	9191926	9192025	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:9215580;1allele=A/G;version=Hapmap2;RS=rs849400797;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	9260494	9260593	.	+	.	Name=Tassel_length;B73v2_pos=1:9282179;1allele=C/T;version=Hapmap2;RS=rs839319958;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	9360978	9361077	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:9379253;1allele=C/T;version=Hapmap2;RS=rs824049296;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	9366235	9366334	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:9384684;1allele=G/A;version=Hapmap2;RS=rs844720893;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	9383413	9383512	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9392814;1allele=G/T;version=Hapmap2;RS=rs802128109;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	9384738	9384837	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9394139;1allele=T/C;version=Hapmap2;RS=rs276192164;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	9387133	9387232	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9396534;1allele=G/A;version=Hapmap2;RS=rs131205527;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	9404630	9404729	.	+	.	Name=Plant_height;B73v2_pos=1:9414034;1allele=A/G;version=Hapmap2;RS=rs834090641;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	9410497	9410596	.	+	.	Name=Plant_height;B73v2_pos=1:9419903;1allele=C/T;version=Hapmap2;RS=rs805538619;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	9413236	9413335	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:9422642;1allele=G/T;version=Hapmap2;RS=rs815948013;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	9416698	9416797	.	+	.	Name=Plant_height;B73v2_pos=1:9426104;1allele=T/G;version=Hapmap2;RS=rs823560692;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	9419988	9420087	.	+	.	Name=Ear_height;B73v2_pos=1:9429394;1allele=C/A;version=Hapmap2;RS=rs830616276;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	9420317	9420416	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9429723;1allele=C/A;version=Hapmap2;RS=rs276192277;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	9442310	9442409	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:9451816;1allele=G/A;version=Hapmap2;RS=rs808364149;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	9443611	9443710	.	+	.	Name=Plant_height;B73v2_pos=1:9453117;1allele=G/A;version=Hapmap2;RS=rs823199248;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	9476775	9476874	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9484404;1allele=G/A;version=Hapmap2;RS=rs849428364;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	9501732	9501831	.	+	.	Name=Plant_height;B73v2_pos=1:9509365;1allele=A/G;version=Hapmap2;RS=rs820604484;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	9526210	9526309	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:9533841;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	9562236	9562336	.	+	.	Name=Plant_height;B73v2_pos=1:9569416;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	9576814	9576913	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:9583993;1allele=T/C;version=Hapmap1;RS=rs276192681;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	9816594	9816693	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:9806852;1allele=T/G;version=Hapmap2;RS=rs128371788;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	9861995	9862094	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9852155;1allele=A/G;version=Hapmap2;RS=rs817287435;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	9879473	9879572	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:9869188;1allele=G/C;version=Hapmap2;RS=rs821621362;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	9925539	9925638	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:9915450;1allele=C/T;version=Hapmap2;RS=rs724234547;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	10040718	10040817	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:10032896;1allele=T/G;version=Hapmap2;RS=rs128372151;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	10041711	10041810	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:10033889;1allele=G/C;version=Hapmap2;RS=rs811456066;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	10045512	10045611	.	+	.	Name=Plant_height;B73v2_pos=1:10037690;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10153095	10153194	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10122974;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10181068	10181167	.	+	.	Name=Ear_height;B73v2_pos=1:10076296;1allele=C/A;version=Hapmap2;RS=rs827120279;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	10200708	10200807	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10095933;1allele=A/G;version=Hapmap2;RS=rs828188067;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	10223726	10223825	.	+	.	Name=Plant_height;B73v2_pos=1:10159643;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10478898	10478997	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:10403459;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10478898	10478997	.	+	.	Name=Ear_height;B73v2_pos=1:10403459;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10556066	10556165	.	+	.	Name=Ear_height;B73v2_pos=1:10540136;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10559073	10559172	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:10537126;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10615229	10615328	.	+	.	Name=Ear_height;B73v2_pos=1:10511590;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10672625	10672724	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:10584069;1allele=C/T;version=Hapmap2;RS=rs276193715;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	10674587	10674686	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10586031;1allele=A/G;version=Hapmap1;RS=rs131206867;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	10680064	10680163	.	+	.	Name=Ear_height;B73v2_pos=1:10591508;1allele=A/G;version=Hapmap2;RS=rs276193756;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	10688486	10688585	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:10599998;1allele=A/C;version=Hapmap2;RS=rs828960461;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	10708285	10708384	.	+	.	Name=Plant_height;B73v2_pos=1:10620841;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10737594	10737693	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:10648641;1allele=T/C;version=Hapmap2;RS=rs844564765;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	10738028	10738127	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:10649075;1allele=G/T;version=Hapmap2;RS=rs837935429;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	10855083	10855182	.	+	.	Name=Ear_height;B73v2_pos=1:10774535;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10878388	10878487	.	+	.	Name=Plant_height;B73v2_pos=1:10754141;1allele=C/T;version=Hapmap2;RS=rs840805879;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	10937655	10937754	.	+	.	Name=Ear_height;B73v2_pos=1:10850783;1allele=G/A;version=Hapmap2;RS=rs128373112;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	10938391	10938490	.	+	.	Name=Plant_height;B73v2_pos=1:10851519;1allele=A/G;version=Hapmap2;RS=rs845665456;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	10953950	10954049	.	+	.	Name=Plant_height;B73v2_pos=1:10867143;1allele=G/A;version=Hapmap2;RS=rs827032277;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	10954460	10954559	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:10867653;1allele=G/A;version=Hapmap2;RS=rs128373134;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	10954460	10954559	.	+	.	Name=Plant_height;B73v2_pos=1:10867653;1allele=G/A;version=Hapmap2;RS=rs128373134;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	10960084	10960183	.	+	.	Name=Ear_height;B73v2_pos=1:10873277;1allele=A/G;version=Hapmap2;RS=rs1064741948;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	10963868	10963967	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:10877061;1allele=A/G;version=Hapmap2;RS=rs131207219;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	10965171	10965270	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:10878364;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	10968082	10968181	.	+	.	Name=Plant_height;B73v2_pos=1:10881275;1allele=C/A;version=Hapmap2;RS=rs811889160;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	10982291	10982390	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:10895491;1allele=C/T;version=Hapmap2;RS=rs805011432;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	10984743	10984842	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10897943;1allele=A/G;version=Hapmap2;RS=rs822064016;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	10987245	10987344	.	+	.	Name=Plant_height;B73v2_pos=1:10900433;1allele=C/A;version=Hapmap2;RS=rs131207264;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	10987245	10987344	.	+	.	Name=Ear_height;B73v2_pos=1:10900433;1allele=C/A;version=Hapmap2;RS=rs131207264;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	10987259	10987358	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:10900447;1allele=A/G;version=Hapmap2;RS=rs128373259;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	10988665	10988764	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10901853;1allele=G/C;version=Hapmap2;RS=rs817879817;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	10988937	10989036	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:10902125;1allele=G/A;version=Hapmap2;RS=rs838660176;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	10990661	10990760	.	+	.	Name=Plant_height;B73v2_pos=1:10903849;1allele=A/C;version=Hapmap2;RS=rs1062849270;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	11020414	11020513	.	+	.	Name=Plant_height;B73v2_pos=1:10933925;1allele=T/C;version=Hapmap2;RS=rs276194236;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11049060	11049159	.	+	.	Name=Ear_height;B73v2_pos=1:10962571;1allele=C/T;version=Hapmap2;RS=rs128373379;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11054839	11054938	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:10968350;1allele=G/A;version=Hapmap2;RS=rs842364029;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11054844	11054943	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:10968355;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11055440	11055539	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10968951;1allele=G/T;version=Hapmap2;RS=rs131207417;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	11057493	11057592	.	+	.	Name=Plant_height;B73v2_pos=1:10971004;1allele=G/C;version=Hapmap2;RS=rs131207484;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	11063708	11063807	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10977219;1allele=T/A;version=Hapmap2;RS=rs131207561;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11063912	11064011	.	+	.	Name=Ear_height;B73v2_pos=1:10977423;1allele=A/G;version=Hapmap2;RS=rs131207568;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11067035	11067134	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:10980546;1allele=G/A;version=Hapmap2;RS=rs819732168;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11068053	11068152	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:10981564;1allele=G/A;version=Hapmap2;RS=rs128373486;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11076442	11076541	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:10989953;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11077234	11077333	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:10990745;1allele=G/A;version=Hapmap2;RS=rs128373515;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11077477	11077576	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:10990988;1allele=G/C;version=Hapmap2;RS=rs128373518;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	11078233	11078332	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:10991744;1allele=C/G;version=Hapmap1;RS=rs131207732;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	11125309	11125408	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:11038820;1allele=G/T;version=Hapmap2;RS=rs849708561;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	11247084	11247183	.	+	.	Name=Tassel_length;B73v2_pos=1:11161907;1allele=T/G;version=Hapmap2;RS=rs824439192;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11247087	11247186	.	+	.	Name=Tassel_length;B73v2_pos=1:11161910;1allele=A/G;version=Hapmap2;RS=rs1062693103;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11254881	11254980	.	+	.	Name=Days_to_silk;B73v2_pos=1:11169704;1allele=G/A;version=Hapmap2;RS=rs276194537;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11254881	11254980	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:11169704;1allele=G/A;version=Hapmap2;RS=rs276194537;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11255678	11255777	.	+	.	Name=Ear_height;B73v2_pos=1:11170501;1allele=T/A;version=Hapmap1;RS=rs131207819;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11259531	11259630	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:11174351;1allele=C/G;version=Hapmap1;RS=rs724808273;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	11259531	11259630	.	+	.	Name=Plant_height;B73v2_pos=1:11174351;1allele=C/G;version=Hapmap1;RS=rs724808273;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	11260415	11260514	.	+	.	Name=Plant_height;B73v2_pos=1:11175235;1allele=C/A;version=Hapmap2;RS=rs276194563;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	11261060	11261159	.	+	.	Name=Tassel_length;B73v2_pos=1:11175880;1allele=A/C;version=Hapmap2;RS=rs842955683;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	11261891	11261990	.	+	.	Name=Plant_height;B73v2_pos=1:11176711;1allele=C/G;version=Hapmap2;RS=rs833364744;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	11262773	11262872	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11177593;1allele=G/T;version=Hapmap2;RS=rs128373962;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	11303348	11303447	.	+	.	Name=Plant_height;B73v2_pos=1:11210161;1allele=A/G;version=Hapmap2;RS=rs841871717;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11304718	11304817	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:11211531;1allele=G/T;version=Hapmap2;RS=rs131207863;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	11311986	11312085	.	+	.	Name=Ear_height;B73v2_pos=1:11218801;1allele=A/G;version=Hapmap2;RS=rs128374007;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11328251	11328350	.	+	.	Name=Plant_height;B73v2_pos=1:11239866;1allele=G/A;version=Hapmap2;RS=rs128374184;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11334304	11334403	.	+	.	Name=Plant_height;B73v2_pos=1:11245919;1allele=T/C;version=Hapmap2;RS=rs814804293;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11334304	11334403	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11245919;1allele=T/C;version=Hapmap2;RS=rs814804293;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11365564	11365663	.	+	.	Name=Plant_height;B73v2_pos=1:11277185;1allele=A/G;version=Hapmap2;RS=rs838536325;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11367829	11367928	.	+	.	Name=Ear_height;B73v2_pos=1:11279450;1allele=T/C;version=Hapmap2;RS=rs276194831;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11367829	11367928	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11279450;1allele=T/C;version=Hapmap2;RS=rs276194831;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11367829	11367928	.	+	.	Name=Plant_height;B73v2_pos=1:11279450;1allele=T/C;version=Hapmap2;RS=rs276194831;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11367876	11367975	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:11279497;1allele=T/C;version=Hapmap2;RS=rs276194832;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11368442	11368541	.	+	.	Name=Ear_height;B73v2_pos=1:11280063;1allele=A/G;version=Hapmap2;RS=rs818992785;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11369687	11369786	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11281308;1allele=T/G;version=Hapmap2;RS=rs276194836;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11369687	11369786	.	+	.	Name=Plant_height;B73v2_pos=1:11281308;1allele=T/G;version=Hapmap2;RS=rs276194836;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11385234	11385333	.	+	.	Name=Plant_height;B73v2_pos=1:11296856;1allele=C/A;version=Hapmap2;RS=rs128374303;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	11385234	11385333	.	+	.	Name=Ear_height;B73v2_pos=1:11296856;1allele=C/A;version=Hapmap2;RS=rs128374303;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	11390525	11390624	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11302147;1allele=A/T;version=Hapmap2;RS=rs128374342;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	11391220	11391319	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11302842;1allele=T/C;version=Hapmap2;RS=rs128374344;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11392456	11392555	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:11304078;1allele=T/A;version=Hapmap2;RS=rs808299776;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	11409755	11409854	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:11321496;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11467225	11467324	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:11379149;1allele=A/G;version=Hapmap2;RS=rs809816331;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11487953	11488052	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:11399877;1allele=A/C;version=Hapmap2;RS=rs128374480;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	11557708	11557807	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:11472522;1allele=C/A;version=Hapmap2;RS=rs822038217;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	11558961	11559060	.	+	.	Name=Plant_height;B73v2_pos=1:11473775;1allele=G/C;version=Hapmap2;RS=rs276195036;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	11558961	11559060	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11473775;1allele=G/C;version=Hapmap2;RS=rs276195036;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	11559556	11559655	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:11474370;1allele=C/T;version=Hapmap2;RS=rs276195041;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11607899	11607998	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:11521448;1allele=G/A;version=Hapmap2;RS=rs128374664;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11608052	11608151	.	+	.	Name=Starch;B73v2_pos=1:11521601;1allele=C/G;version=Hapmap2;RS=rs276195202;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	11610732	11610831	.	+	.	Name=Tassel_length;B73v2_pos=1:11524281;1allele=A/C;version=Hapmap2;RS=rs803050132;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	11611148	11611247	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:11524697;1allele=/TGGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11611149	11611248	.	+	.	Name=Plant_height;B73v2_pos=1:11524698;1allele=G/A;version=Hapmap1;RS=rs128374711;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	11724638	11724737	.	+	.	Name=Plant_height;B73v2_pos=1:11637855;1allele=C/T;version=Hapmap2;RS=rs1063421127;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11733757	11733856	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:11646974;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11759837	11759936	.	+	.	Name=Plant_height;B73v2_pos=1:11672592;1allele=G/A;version=Hapmap2;RS=rs849045828;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11832841	11832940	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11745593;1allele=C/T;version=Hapmap1;RS=rs131208202;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11848054	11848153	.	+	.	Name=Ear_height;B73v2_pos=1:11760806;1allele=T/C;version=Hapmap2;RS=rs802591175;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11849399	11849498	.	+	.	Name=Ear_height;B73v2_pos=1:11762151;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11856130	11856229	.	+	.	Name=Ear_height;B73v2_pos=1:11768882;1allele=C/T;version=Hapmap2;RS=rs812056490;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11877176	11877275	.	+	.	Name=Plant_height;B73v2_pos=1:11790798;1allele=T/G;version=Hapmap2;RS=rs128375526;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11880661	11880760	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11794283;1allele=T/C;version=Hapmap2;RS=rs276195683;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	11880661	11880760	.	+	.	Name=Plant_height;B73v2_pos=1:11794283;1allele=T/C;version=Hapmap2;RS=rs276195683;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	11880892	11880991	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11794514;1allele=T/C;version=Hapmap2;RS=rs845760680;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	11886876	11886975	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:11799449;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11891122	11891221	.	+	.	Name=Ear_height;B73v2_pos=1:11803695;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11891443	11891542	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11804016;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11891876	11891975	.	+	.	Name=Ear_height;B73v2_pos=1:11804449;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	11898288	11898387	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11811138;1allele=G/A;version=Hapmap2;RS=rs811256654;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11901568	11901667	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11814418;1allele=C/T;version=Hapmap2;RS=rs807042292;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11901568	11901667	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:11814418;1allele=C/T;version=Hapmap2;RS=rs807042292;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11903745	11903844	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11816595;1allele=C/A;version=Hapmap2;RS=rs848796113;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	11913184	11913283	.	+	.	Name=Ear_row_number;B73v2_pos=1:11826034;1allele=G/A;version=Hapmap2;RS=rs831085688;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11914390	11914489	.	+	.	Name=Ear_height;B73v2_pos=1:11827240;1allele=A/G;version=Hapmap2;RS=rs276195722;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11914390	11914489	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11827240;1allele=A/G;version=Hapmap2;RS=rs276195722;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	11914395	11914494	.	+	.	Name=Plant_height;B73v2_pos=1:11827245;1allele=T/G;version=Hapmap2;RS=rs128375640;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11914395	11914494	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:11827245;1allele=T/G;version=Hapmap2;RS=rs128375640;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11914395	11914494	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:11827245;1allele=T/G;version=Hapmap2;RS=rs128375640;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11914395	11914494	.	+	.	Name=Ear_height;B73v2_pos=1:11827245;1allele=T/G;version=Hapmap2;RS=rs128375640;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	11914423	11914522	.	+	.	Name=Ear_height;B73v2_pos=1:11827273;1allele=G/A;version=Hapmap2;RS=rs844037933;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11933701	11933800	.	+	.	Name=Ear_height;B73v2_pos=1:11846553;1allele=G/T;version=Hapmap2;RS=rs726341881;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	11939445	11939544	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:11852299;1allele=G/A;version=Hapmap2;RS=rs826850715;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	11939462	11939561	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:11852316;1allele=C/T;version=Hapmap2;RS=rs276195782;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	11969784	11969883	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11882645;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	12028925	12029024	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11938825;1allele=A/G;version=Hapmap2;RS=rs830705094;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12030517	12030616	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:11940417;1allele=C/T;version=Hapmap2;RS=rs814639375;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	12030517	12030616	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11940417;1allele=C/T;version=Hapmap2;RS=rs814639375;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	12040345	12040444	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11950435;1allele=T/G;version=Hapmap2;RS=rs816203182;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	12041274	12041373	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11951364;1allele=C/T;version=Hapmap2;RS=rs810192228;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	12042481	12042580	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:11952571;1allele=G/C;version=Hapmap1;RS=rs131208462;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	12076136	12076235	.	+	.	Name=Plant_height;B73v2_pos=1:11991918;1allele=C/T;version=Hapmap2;RS=rs836721833;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	12092650	12092749	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:12008435;1allele=G/C;version=Hapmap2;RS=rs839227423;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	12124200	12124299	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:12040187;1allele=G/A;version=Hapmap2;RS=rs840211893;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12151906	12152005	.	+	.	Name=Tassel_length;B73v2_pos=1:12066705;1allele=A/C;version=Hapmap2;RS=rs840353344;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	12191711	12191810	.	+	.	Name=Starch;B73v2_pos=1:12106563;1allele=A/G;version=Hapmap2;RS=rs128376159;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12249508	12249607	.	+	.	Name=Plant_height;B73v2_pos=1:12164663;1allele=A/G;version=Hapmap2;RS=rs802396625;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12250965	12251064	.	+	.	Name=Ear_height;B73v2_pos=1:12166120;1allele=G/A;version=Hapmap2;RS=rs128376288;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12254349	12254448	.	+	.	Name=Plant_height;B73v2_pos=1:12169503;1allele=/GGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	12255760	12255859	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:12170914;1allele=C/T;version=Hapmap1;RS=rs131208880;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	12256775	12256874	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:12171929;1allele=C/T;version=Hapmap1;RS=rs131208906;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	12260100	12260199	.	+	.	Name=Tassel_length;B73v2_pos=1:12175254;1allele=A/G;version=Hapmap2;RS=rs727045303;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12260316	12260415	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:12175470;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	12261855	12261954	.	+	.	Name=Plant_height;B73v2_pos=1:12177009;1allele=G/C;version=Hapmap1;RS=rs128376345;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	12261855	12261954	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:12177009;1allele=G/C;version=Hapmap1;RS=rs128376345;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	12261855	12261954	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:12177009;1allele=G/C;version=Hapmap1;RS=rs128376345;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	12263399	12263498	.	+	.	Name=Plant_height;B73v2_pos=1:12178553;1allele=G/A;version=Hapmap2;RS=rs276196474;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12263399	12263498	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:12178553;1allele=G/A;version=Hapmap2;RS=rs276196474;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12269641	12269740	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:12184795;1allele=G/A;version=Hapmap2;RS=rs727230433;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12277119	12277218	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:12192273;1allele=G/C;version=Hapmap2;RS=rs843055864;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	12280102	12280201	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:12195851;1allele=G/A;version=Hapmap2;RS=rs834435317;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12289390	12289489	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:12204405;1allele=G/T;version=Hapmap2;RS=rs803200795;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	12291123	12291222	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:12206139;1allele=G/T;version=Hapmap2;RS=rs832540775;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	12295221	12295320	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:12210237;1allele=G/C;version=Hapmap2;RS=rs726199480;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	12295498	12295597	.	+	.	Name=Ear_height;B73v2_pos=1:12210514;1allele=G/T;version=Hapmap2;RS=rs725099969;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	12336002	12336101	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:12246504;1allele=G/A;version=Hapmap2;RS=rs815493471;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	12338651	12338750	.	+	.	Name=Ear_row_number;B73v2_pos=1:12249153;1allele=GATA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	12340996	12341095	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:12251498;1allele=A/G;version=Hapmap2;RS=rs725420159;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12363249	12363348	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:12273415;1allele=G/A;version=Hapmap2;RS=rs833419093;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12364336	12364435	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:12274502;1allele=G/A;version=Hapmap2;RS=rs806228177;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12386492	12386591	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:12297323;1allele=G/A;version=Hapmap2;RS=rs828942793;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12409273	12409372	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:12319026;1allele=G/A;version=Hapmap2;RS=rs725744606;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12429185	12429284	.	+	.	Name=Tassel_length;B73v2_pos=1:12338938;1allele=A/G;version=Hapmap2;RS=rs131209385;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	12441414	12441513	.	+	.	Name=Tassel_length;B73v2_pos=1:12351242;1allele=T/C;version=Hapmap2;RS=rs844104961;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	12441511	12441610	.	+	.	Name=Ear_row_number;B73v2_pos=1:12351339;1allele=A/G;version=Hapmap2;RS=rs848126005;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12488776	12488875	.	+	.	Name=Tassel_length;B73v2_pos=1:12398607;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	12490231	12490330	.	+	.	Name=Starch;B73v2_pos=1:12400062;1allele=A/C;version=Hapmap2;RS=rs1062097591;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	12490943	12491042	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:12400774;1allele=G/A;version=Hapmap2;RS=rs837455443;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12507808	12507907	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:12417639;1allele=G/A;version=Hapmap2;RS=rs805804140;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12552718	12552817	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:12462550;1allele=G/A;version=Hapmap2;RS=rs835301778;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12576442	12576541	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:12486273;1allele=G/C;version=Hapmap2;RS=rs725004884;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	12610077	12610176	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:12508078;1allele=A/G;version=Hapmap2;RS=rs829501406;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12610635	12610734	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:12508636;1allele=T/C;version=Hapmap2;RS=rs726864421;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	12616008	12616107	.	+	.	Name=Plant_height;B73v2_pos=1:12514009;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	12617792	12617891	.	+	.	Name=Height_above_ear;B73v2_pos=1:12515793;1allele=A/T;version=Hapmap2;RS=rs128377398;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	12617842	12617941	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:12515843;1allele=G/A;version=Hapmap1;RS=rs726908213;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12619677	12619776	.	+	.	Name=Plant_height;B73v2_pos=1:12517678;1allele=T/G;version=Hapmap2;RS=rs842781863;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	12623306	12623405	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:12521307;1allele=A/G;version=Hapmap1;RS=rs128377459;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12623345	12623444	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:12521346;1allele=A/G;version=Hapmap2;RS=rs276197048;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12624882	12624981	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:12522883;1allele=A/G;version=Hapmap2;RS=rs128377482;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12879195	12879294	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:12791288;1allele=G/A;version=Hapmap2;RS=rs844366079;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	12881156	12881255	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:12793245;1allele=A/G;version=Hapmap2;RS=rs131210296;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12946474	12946573	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:12851905;1allele=G/A;version=Hapmap2;RS=rs821285056;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	12971735	12971834	.	+	.	Name=Height_above_ear;B73v2_pos=1:12876749;1allele=G/T;version=Hapmap2;RS=rs848636049;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	12971737	12971836	.	+	.	Name=Height_above_ear;B73v2_pos=1:12876751;1allele=A/T;version=Hapmap2;RS=rs805554002;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	13031727	13031826	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:12944262;1allele=A/G;version=Hapmap2;RS=rs131210827;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	13057236	13057335	.	+	.	Name=Malate;B73v2_pos=1:12972459;1allele=T/A;version=Hapmap2;RS=rs831464395;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	13057457	13057556	.	+	.	Name=Malate;B73v2_pos=1:12972680;1allele=T/G;version=Hapmap2;RS=rs817891458;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	13061217	13061316	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:12976440;1allele=C/G;version=Hapmap2;RS=rs128378386;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	13061619	13061718	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:12976842;1allele=T/C;version=Hapmap2;RS=rs128378380;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	13104214	13104313	.	+	.	Name=Sucrose;B73v2_pos=1:13005796;1allele=T/C;version=Hapmap2;RS=rs803478916;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	13132803	13132902	.	+	.	Name=Malate;B73v2_pos=1:13033890;1allele=G/A;version=Hapmap2;RS=rs807965874;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	13143126	13143225	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:13096362;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	13143986	13144085	.	+	.	Name=Leaf_width;B73v2_pos=1:13095502;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	13166564	13166663	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:13072924;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	13215318	13215417	.	+	.	Name=Cob_diameter;B73v2_pos=1:13115324;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	13722366	13722465	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:13605399;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	13755161	13755260	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:13638681;1allele=G/A;version=Hapmap2;RS=rs276198105;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	13755828	13755927	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:13639348;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	13796536	13796635	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:13680083;1allele=T/A;version=Hapmap2;RS=rs807654507;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	13796552	13796651	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:13680099;1allele=A/G;version=Hapmap2;RS=rs830175415;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	13802769	13802868	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:13686316;1allele=G/A;version=Hapmap2;RS=rs128379808;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	13915971	13916070	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:13796082;1allele=T/C;version=Hapmap2;RS=rs1063226303;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	13920471	13920570	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:13800583;1allele=C/T;version=Hapmap2;RS=rs726164350;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	13926435	13926534	.	+	.	Name=Ear_height;B73v2_pos=1:13806548;1allele=A/G;version=Hapmap2;RS=rs814674537;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	13927750	13927849	.	+	.	Name=Malate;B73v2_pos=1:13807863;1allele=C/T;version=Hapmap2;RS=rs724375094;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14146416	14146515	.	+	.	Name=Leaf_width;B73v2_pos=1:14035140;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	14215691	14215790	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:14104411;1allele=G/A;version=Hapmap2;RS=rs276198468;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	14216211	14216310	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:14104931;1allele=C/G;version=Hapmap1;RS=rs131211861;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14216494	14216593	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:14105214;1allele=G/A;version=Hapmap2;RS=rs128380534;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	14224539	14224638	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14113259;1allele=C/T;version=Hapmap2;RS=rs1063044747;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	14229853	14229952	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14118573;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	14253836	14253935	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14163556;1allele=A/G;version=Hapmap2;RS=rs803106116;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	14256901	14257000	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:14166621;1allele=C/A;version=Hapmap1;RS=rs131211953;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	14492875	14492974	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:14397399;1allele=T/C;version=Hapmap2;RS=rs1062710636;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14546431	14546530	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14449040;1allele=C/T;version=Hapmap1;RS=rs131212157;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14599293	14599392	.	+	.	Name=Tassel_length;B73v2_pos=1:14508583;1allele=C/T;version=Hapmap2;RS=rs724737857;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14602591	14602690	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:14511881;1allele=T/C;version=Hapmap2;RS=rs128380972;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	14603091	14603190	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:14512381;1allele=G/T;version=Hapmap2;RS=rs128380973;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	14647278	14647377	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:14546509;1allele=G/A;version=Hapmap2;RS=rs820941571;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	14650157	14650256	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:14549388;1allele=G/A;version=Hapmap2;RS=rs826743432;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	14650220	14650319	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:14549451;1allele=C/T;version=Hapmap2;RS=rs806768962;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14652131	14652230	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14551362;1allele=G/T;version=Hapmap2;RS=rs128381003;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	14653365	14653464	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:14552596;1allele=C/T;version=Hapmap2;RS=rs836231144;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14681285	14681384	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:14582645;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	14682929	14683028	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:14581001;1allele=T/C;version=Hapmap2;RS=rs815277447;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	14683876	14683975	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:14580054;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	14684431	14684530	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:14579499;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	14685989	14686088	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:14577941;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	14728623	14728722	.	+	.	Name=Plant_height;B73v2_pos=1:14626450;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	14739710	14739809	.	+	.	Name=Plant_height;B73v2_pos=1:14637543;1allele=C/T;version=Hapmap2;RS=rs814313598;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14739710	14739809	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:14637543;1allele=C/T;version=Hapmap2;RS=rs814313598;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14739710	14739809	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:14637543;1allele=C/T;version=Hapmap2;RS=rs814313598;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14740261	14740360	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:14638094;1allele=G/A;version=Hapmap1;RS=rs128381174;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	14745439	14745538	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:14643273;1allele=C/T;version=Hapmap2;RS=rs812064493;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14893706	14893805	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14789548;1allele=C/T;version=Hapmap2;RS=rs128381848;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14907382	14907481	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:14803264;1allele=G/A;version=Hapmap2;RS=rs802086440;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	14907826	14907925	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:14803708;1allele=C/T;version=Hapmap1;RS=rs131212391;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	14920320	14920419	.	+	.	Name=Sucrose;B73v2_pos=1:14816202;1allele=T/C;version=Hapmap2;RS=rs814284528;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	15049266	15049365	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:14919863;1allele=G/A;version=Hapmap2;RS=rs128382303;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	15071910	15072009	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:14942506;1allele=T/A;version=Hapmap1;RS=rs128382374;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	15072770	15072869	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14943366;1allele=A/C;version=Hapmap2;RS=rs128382382;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	15074074	15074173	.	+	.	Name=Leaf_width;B73v2_pos=1:14944670;1allele=T/C;version=Hapmap2;RS=rs128382391;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	15085429	15085528	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14956025;1allele=T/C;version=Hapmap1;RS=rs131212697;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	15090737	15090836	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:14961331;1allele=G/A;version=Hapmap2;RS=rs725307760;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	15135225	15135324	.	+	.	Name=Plant_height;B73v2_pos=1:15006947;1allele=T/C;version=Hapmap2;RS=rs823192794;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	15135760	15135859	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:15007482;1allele=G/C;version=Hapmap1;RS=rs131212772;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	15204085	15204184	.	+	.	Name=Malate;B73v2_pos=1:15077454;1allele=C/A;version=Hapmap2;RS=rs815338489;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	15218301	15218400	.	+	.	Name=Tassel_length;B73v2_pos=1:15091670;1allele=G/T;version=Hapmap2;RS=rs827190875;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	15218654	15218753	.	+	.	Name=Tassel_length;B73v2_pos=1:15092023;1allele=G/A;version=Hapmap2;RS=rs808135463;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	15230679	15230778	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:15104048;1allele=C/T;version=Hapmap2;RS=rs844793971;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	15233631	15233730	.	+	.	Name=Days_to_silk;B73v2_pos=1:15107000;1allele=A/G;version=Hapmap2;RS=rs810559133;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	15270936	15271035	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:15144305;1allele=T/C;version=Hapmap2;RS=rs844792210;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	15299701	15299800	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:15173064;1allele=G/-;version=Hapmap1;RS=rs131213333;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	15364645	15364744	.	+	.	Name=Plant_height;B73v2_pos=1:78502572;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	15409184	15409283	.	+	.	Name=Starch;B73v2_pos=1:15317823;1allele=C/T;version=Hapmap2;RS=rs727385905;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	15409493	15409592	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:15318132;1allele=C/A;version=Hapmap2;RS=rs808152699;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	15678756	15678855	.	+	.	Name=Leaf_length;B73v2_pos=1:15578466;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	15683340	15683439	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:15573883;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	15832066	15832165	.	+	.	Name=Leaf_width;B73v2_pos=1:15702282;1allele=G/C;version=Hapmap2;RS=rs827891821;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	15833036	15833135	.	+	.	Name=Leaf_width;B73v2_pos=1:15703252;1allele=A/G;version=Hapmap2;RS=rs821235447;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	15855050	15855149	.	+	.	Name=Tassel_length;B73v2_pos=1:15725494;1allele=A/T;version=Hapmap2;RS=rs818235977;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	15856037	15856136	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:15726481;1allele=A/G;version=Hapmap2;RS=rs819813051;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	15865347	15865446	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:15735792;1allele=A/G;version=Hapmap1;RS=rs131213710;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	15866009	15866108	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:15736454;1allele=T/A;version=Hapmap2;RS=rs128383435;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	15896538	15896637	.	+	.	Name=Cob_diameter;B73v2_pos=1:15769789;1allele=A/G;version=Hapmap2;RS=rs819263137;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	15896694	15896793	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:15769945;1allele=A/G;version=Hapmap2;RS=rs128383523;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	15896799	15896898	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:15770050;1allele=A/G;version=Hapmap2;RS=rs811788015;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	15896807	15896906	.	+	.	Name=Leaf_width;B73v2_pos=1:15770058;1allele=C/T;version=Hapmap2;RS=rs817820902;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	15900336	15900435	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:15773453;1allele=G/T;version=Hapmap2;RS=rs835223808;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	16034506	16034605	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:15906701;1allele=G/A;version=Hapmap2;RS=rs831846285;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16037016	16037115	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:15909211;1allele=G/-;version=Hapmap1;RS=rs128383829;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16041727	16041826	.	+	.	Name=Leaf_width;B73v2_pos=1:15913922;1allele=C/T;version=Hapmap2;RS=rs837728374;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16132256	16132355	.	+	.	Name=Tassel_length;B73v2_pos=1:16000209;1allele=/GTCTCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	16133209	16133308	.	+	.	Name=Tassel_length;B73v2_pos=1:16001162;1allele=A/T;version=Hapmap2;RS=rs822687683;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	16177584	16177683	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:16045278;1allele=C/T;version=Hapmap2;RS=rs131214165;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16177585	16177684	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:16045279;1allele=C/T;version=Hapmap2;RS=rs131214166;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16177585	16177684	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:16045279;1allele=C/T;version=Hapmap2;RS=rs131214166;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16177588	16177687	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:16045282;1allele=T/C;version=Hapmap2;RS=rs824390806;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16177588	16177687	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:16045282;1allele=T/C;version=Hapmap2;RS=rs824390806;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16177810	16177909	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:16045504;1allele=A/C;version=Hapmap2;RS=rs131214176;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	16196789	16196888	.	+	.	Name=Leaf_width;B73v2_pos=1:16064481;1allele=C/T;version=Hapmap2;RS=rs820450170;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16198345	16198444	.	+	.	Name=Sucrose;B73v2_pos=1:16066037;1allele=G/A;version=Hapmap2;RS=rs837437789;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	16200355	16200454	.	+	.	Name=Tassel_length;B73v2_pos=1:16068047;1allele=T/G;version=Hapmap1;RS=rs128384244;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	16205273	16205372	.	+	.	Name=Leaf_width;B73v2_pos=1:16072966;1allele=C/T;version=Hapmap2;RS=rs804424300;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16230746	16230845	.	+	.	Name=Leaf_width;B73v2_pos=1:16098439;1allele=G/A;version=Hapmap2;RS=rs808539325;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16261035	16261134	.	+	.	Name=Cob_diameter;B73v2_pos=1:16128729;1allele=G/A;version=Hapmap2;RS=rs128384280;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	16262937	16263036	.	+	.	Name=Days_to_silk;B73v2_pos=1:16130631;1allele=T/C;version=Hapmap1;RS=rs131214562;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16266111	16266210	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:16133806;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	16271606	16271705	.	+	.	Name=Leaf_width;B73v2_pos=1:16139610;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	16271744	16271841	.	+	.	Name=Leaf_width;B73v2_pos=1:16139747;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	16280956	16281055	.	+	.	Name=Ear_row_number;B73v2_pos=1:16149036;1allele=T/C;version=Hapmap2;RS=rs804951255;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16289678	16289777	.	+	.	Name=Tassel_length;B73v2_pos=1:16157759;1allele=G/A;version=Hapmap2;RS=rs817099691;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16311292	16311391	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16179283;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	16329928	16330027	.	+	.	Name=Leaf_width;B73v2_pos=1:16197916;1allele=A/G;version=Hapmap2;RS=rs128384419;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16331547	16331646	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:16199535;1allele=T/C;version=Hapmap2;RS=rs813605774;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16343858	16343957	.	+	.	Name=Leaf_width;B73v2_pos=1:16211846;1allele=C/T;version=Hapmap2;RS=rs276200673;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16616011	16616110	.	+	.	Name=Ear_row_number;B73v2_pos=1:16347353;1allele=C/T;version=Hapmap2;RS=rs804787645;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16640184	16640283	.	+	.	Name=Ear_row_number;B73v2_pos=1:16371192;1allele=C/G;version=Hapmap2;RS=rs850095639;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	16645316	16645415	.	+	.	Name=Fructose;B73v2_pos=1:16376324;1allele=/GCCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	16704619	16704718	.	+	.	Name=Leaf_width;B73v2_pos=1:16435516;1allele=T/G;version=Hapmap2;RS=rs811428105;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	16706452	16706551	.	+	.	Name=Fructose;B73v2_pos=1:16437348;1allele=A/G;version=Hapmap1;RS=rs131214882;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	16706761	16706860	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:16437657;1allele=A/T;version=Hapmap2;RS=rs128384771;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	16707936	16708035	.	+	.	Name=Leaf_width;B73v2_pos=1:16438832;1allele=C/G;version=Hapmap2;RS=rs815011889;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	16709916	16710015	.	+	.	Name=Ear_height;B73v2_pos=1:16440812;1allele=C/G;version=Hapmap1;RS=rs131214928;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16738106	16738205	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:16468651;1allele=A/G;version=Hapmap2;RS=rs131215008;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	16740276	16740375	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16470821;1allele=A/G;version=Hapmap2;RS=rs815603300;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16850150	16850249	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:16581583;1allele=T/C;version=Hapmap2;RS=rs276201121;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	16851619	16851718	.	+	.	Name=Sucrose;B73v2_pos=1:16583052;1allele=C/T;version=Hapmap2;RS=rs820218513;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	16853336	16853435	.	+	.	Name=Sucrose;B73v2_pos=1:16584769;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	16855960	16856059	.	+	.	Name=Tassel_length;B73v2_pos=1:16587393;1allele=T/G;version=Hapmap2;RS=rs842358777;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	16859059	16859158	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:16590492;1allele=A/T;version=Hapmap2;RS=rs809333919;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	16873859	16873958	.	+	.	Name=Height_above_ear;B73v2_pos=1:16605292;1allele=A/G;version=Hapmap2;RS=rs827677604;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16895682	16895781	.	+	.	Name=Tassel_length;B73v2_pos=1:16627194;1allele=G/A;version=Hapmap1;RS=rs131215224;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16895682	16895781	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16627194;1allele=G/A;version=Hapmap1;RS=rs131215224;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	16898631	16898730	.	+	.	Name=Leaf_length;B73v2_pos=1:16630009;1allele=C/G;version=Hapmap2;RS=rs810842226;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	17034713	17034812	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16775895;1allele=G/T;version=Hapmap2;RS=rs128385417;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	17034746	17034845	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16775928;1allele=/ATGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17034878	17034977	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16776060;1allele=C/T;version=Hapmap2;RS=rs131215281;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	17035732	17035831	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:16776914;1allele=G/C;version=Hapmap2;RS=rs846863785;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	17038945	17039044	.	+	.	Name=Tassel_length;B73v2_pos=1:16780125;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17053992	17054091	.	+	.	Name=Cob_diameter;B73v2_pos=1:16795172;1allele=T/C;version=Hapmap2;RS=rs847885613;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	17056486	17056585	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16797666;1allele=T/A;version=Hapmap2;RS=rs828052590;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	17057499	17057598	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16798679;1allele=C/T;version=Hapmap2;RS=rs128385520;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	17057505	17057604	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:16798685;1allele=C/T;version=Hapmap2;RS=rs849854839;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	17060786	17060885	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:16801966;1allele=C/T;version=Hapmap2;RS=rs276201506;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	17080648	17080747	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:16821824;1allele=A/G;version=Hapmap2;RS=rs128385567;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	17085083	17085182	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:16826259;1allele=G/C;version=Hapmap2;RS=rs807923705;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	17092276	17092375	.	+	.	Name=Sucrose;B73v2_pos=1:16833452;1allele=G/A;version=Hapmap2;RS=rs1062388463;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	17093939	17094038	.	+	.	Name=Fructose;B73v2_pos=1:16835115;1allele=T/A;version=Hapmap2;RS=rs825363108;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	17096343	17096442	.	+	.	Name=Ear_row_number;B73v2_pos=1:16837519;1allele=T/C;version=Hapmap2;RS=rs825206395;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	17107069	17107168	.	+	.	Name=Leaf_length;B73v2_pos=1:16848245;1allele=G/A;version=Hapmap2;RS=rs844150264;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	17136445	17136544	.	+	.	Name=Tassel_length;B73v2_pos=1:16877619;1allele=C/T;version=Hapmap2;RS=rs1062361551;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	17209622	17209721	.	+	.	Name=Cob_diameter;B73v2_pos=1:16950928;1allele=/GGCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17241419	17241518	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:16999738;1allele=A/T;version=Hapmap2;RS=rs806832914;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	17244399	17244498	.	+	.	Name=Ear_row_number;B73v2_pos=1:17002719;1allele=C/T;version=Hapmap2;RS=rs276201668;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	17244695	17244794	.	+	.	Name=Sucrose;B73v2_pos=1:17003015;1allele=A/G;version=Hapmap2;RS=rs128385883;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	17328410	17328509	.	+	.	Name=Days_to_silk;B73v2_pos=1:17086734;1allele=/CA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17504702	17504801	.	+	.	Name=Leaf_length;B73v2_pos=1:17319399;1allele=A/G;version=Hapmap2;RS=rs131216012;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	17510355	17510454	.	+	.	Name=Cob_diameter;B73v2_pos=1:17325052;1allele=C/T;version=Hapmap2;RS=rs1060558016;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	17537215	17537314	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:17351806;1allele=T/C;version=Hapmap2;RS=rs816584629;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	17633277	17633376	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:17424492;1allele=C/T;version=Hapmap2;RS=rs841075155;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	17701284	17701383	.	+	.	Name=Fructose;B73v2_pos=1:17492719;1allele=C/T;version=Hapmap2;RS=rs131216186;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	17702860	17702959	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:17494295;1allele=T/A;version=Hapmap2;RS=rs131216224;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	17718881	17718980	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:17510316;1allele=A/T;version=Hapmap2;RS=rs837242698;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	17728043	17728142	.	+	.	Name=Ear_row_number;B73v2_pos=1:17519482;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17728108	17728207	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:17519547;1allele=T/G;version=Hapmap2;RS=rs816241030;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	17728108	17728207	.	+	.	Name=Leaf_width;B73v2_pos=1:17519547;1allele=T/G;version=Hapmap2;RS=rs816241030;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	17728246	17728345	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:17519685;1allele=G/A;version=Hapmap2;RS=rs131216280;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	17729041	17729140	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:17520480;1allele=A/G;version=Hapmap1;RS=rs276201976;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	17729041	17729140	.	+	.	Name=Leaf_width;B73v2_pos=1:17520480;1allele=A/G;version=Hapmap1;RS=rs276201976;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	17731511	17731610	.	+	.	Name=Leaf_width;B73v2_pos=1:17522950;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17731837	17731936	.	+	.	Name=Leaf_width;B73v2_pos=1:17523276;1allele=C/T;version=Hapmap2;RS=rs131216321;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	17733466	17733565	.	+	.	Name=Cob_diameter;B73v2_pos=1:17524905;1allele=G/C;version=Hapmap2;RS=rs276201994;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	17735773	17735872	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:17527212;1allele=T/C;version=Hapmap1;RS=rs131216355;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	17736591	17736690	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:17528030;1allele=C/A;version=Hapmap2;RS=rs829906721;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	17835591	17835656	.	+	.	Name=Ear_row_number;B73v2_pos=1:17635196;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17854595	17854694	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:17654358;1allele=A/G;version=Hapmap2;RS=rs846704487;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	17868937	17869036	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:17668700;1allele=G/A;version=Hapmap1;RS=rs128386756;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	17871204	17871303	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:17670967;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17880351	17880450	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:17680114;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	17880681	17880780	.	+	.	Name=Days_to_silk;B73v2_pos=1:17680444;1allele=C/G;version=Hapmap2;RS=rs802980459;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	17913363	17913462	.	+	.	Name=Ear_row_number;B73v2_pos=1:17713127;1allele=A/G;version=Hapmap2;RS=rs814623088;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	17946735	17946834	.	+	.	Name=Height_above_ear;B73v2_pos=1:17747364;1allele=C/T;version=Hapmap2;RS=rs276202307;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	18029482	18029581	.	+	.	Name=Malate;B73v2_pos=1:17830979;1allele=A/G;version=Hapmap2;RS=rs825031860;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	18032261	18032360	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:17833758;1allele=C/T;version=Hapmap2;RS=rs131216925;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	18040685	18040784	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:17841814;1allele=G/A;version=Hapmap2;RS=rs128387333;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	18044576	18044675	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:17845705;1allele=A/G;version=Hapmap2;RS=rs809734823;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	18046766	18046865	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:17847895;1allele=A/G;version=Hapmap2;RS=rs803772471;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	18047976	18048075	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:17849105;1allele=A/G;version=Hapmap2;RS=rs817133617;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	18082239	18082336	.	+	.	Name=Ear_row_number;B73v2_pos=1:17883144;1allele=A/G;version=Hapmap2;RS=rs1061085111;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	18083554	18083653	.	+	.	Name=Ear_row_number;B73v2_pos=1:17884035;1allele=G/A;version=Hapmap2;RS=rs128387481;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	18084072	18084171	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:17884553;1allele=T/C;version=Hapmap2;RS=rs128387484;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	18084332	18084431	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:17884813;1allele=C/G;version=Hapmap2;RS=rs724202365;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	18084545	18084644	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:17885026;1allele=G/A;version=Hapmap1;RS=rs128387491;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	18086707	18086806	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:17887188;1allele=T/C;version=Hapmap2;RS=rs848263510;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	18089639	18089738	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:17890120;1allele=C/T;version=Hapmap2;RS=rs829819366;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	18165856	18165955	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:17955223;1allele=G/C;version=Hapmap2;RS=rs827338956;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	18172632	18172731	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:17961999;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	18203268	18203367	.	+	.	Name=Ear_row_number;B73v2_pos=1:17993124;1allele=C/T;version=Hapmap2;RS=rs802918727;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	18375825	18375924	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:18176578;1allele=C/T;version=Hapmap2;RS=rs820424367;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	18544627	18544726	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:18344900;1allele=C/A;version=Hapmap2;RS=rs836672536;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	18816010	18816109	.	+	.	Name=Height_above_ear;B73v2_pos=1:18615139;1allele=T/C;version=Hapmap2;RS=rs825762357;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	18824055	18824154	.	+	.	Name=Tassel_length;B73v2_pos=1:18623186;1allele=AGC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	18824055	18824154	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:18623186;1allele=AGC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	18851062	18851161	.	+	.	Name=Leaf_width;B73v2_pos=1:18648638;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	18880823	18880922	.	+	.	Name=Leaf_length;B73v2_pos=1:18677644;1allele=G/A;version=Hapmap2;RS=rs849614241;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	18881176	18881275	.	+	.	Name=Height_above_ear;B73v2_pos=1:18677997;1allele=C/T;version=Hapmap2;RS=rs725325573;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	18882503	18882602	.	+	.	Name=Height_above_ear;B73v2_pos=1:18679324;1allele=C/T;version=Hapmap2;RS=rs276203697;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	18897343	18897442	.	+	.	Name=Height_above_ear;B73v2_pos=1:18695219;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19106516	19106615	.	+	.	Name=Ear_row_number;B73v2_pos=1:18892323;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19169910	19170009	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:18954936;1allele=C/T;version=Hapmap2;RS=rs812700834;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19192873	19192972	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:18977914;1allele=C/G;version=Hapmap1;RS=rs131217843;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	19202745	19202844	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:18987794;1allele=C/T;version=Hapmap2;RS=rs815992545;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19207575	19207674	.	+	.	Name=Leaf_width;B73v2_pos=1:18992625;1allele=G/A;version=Hapmap2;RS=rs128389107;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	19278065	19278164	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:19069494;1allele=T/C;version=Hapmap1;RS=rs131218041;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	19317203	19317302	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:19107736;1allele=G/A;version=Hapmap2;RS=rs825938990;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	19340520	19340619	.	+	.	Name=Leaf_width;B73v2_pos=1:19131054;1allele=A/C;version=Hapmap2;RS=rs276204048;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	19366471	19366570	.	+	.	Name=Leaf_width;B73v2_pos=1:19157005;1allele=C/T;version=Hapmap2;RS=rs1063373571;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	19535211	19535310	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:19349558;1allele=T/C;version=Hapmap2;RS=rs848709817;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	19535428	19535527	.	+	.	Name=Height_above_ear;B73v2_pos=1:19349775;1allele=G/A;version=Hapmap2;RS=rs828535855;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	19536179	19536278	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:19350526;1allele=T/C;version=Hapmap2;RS=rs276204279;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19536179	19536278	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:19350526;1allele=T/C;version=Hapmap2;RS=rs276204279;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19536935	19537034	.	+	.	Name=Ear_height;B73v2_pos=1:19351282;1allele=C/T;version=Hapmap2;RS=rs824758456;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19538099	19538198	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19352446;1allele=A/T;version=Hapmap2;RS=rs830436313;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	19538562	19538661	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19352909;1allele=C/T;version=Hapmap2;RS=rs276204301;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	19539034	19539133	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19353381;1allele=A/G;version=Hapmap2;RS=rs131218601;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	19539034	19539133	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:19353381;1allele=A/G;version=Hapmap2;RS=rs131218601;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	19539971	19540070	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:19354318;1allele=A/G;version=Hapmap2;RS=rs276204317;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	19541745	19541844	.	+	.	Name=Height_above_ear;B73v2_pos=1:19356092;1allele=T/C;version=Hapmap1;RS=rs131218571;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	19541950	19542049	.	+	.	Name=Height_above_ear;B73v2_pos=1:19356297;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19543905	19544004	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19358252;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19543906	19544005	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19358253;1allele=C/T;version=Hapmap2;RS=rs847596583;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19547512	19547611	.	+	.	Name=Height_above_ear;B73v2_pos=1:19361864;1allele=T/A;version=Hapmap2;RS=rs276204358;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	19566546	19566645	.	+	.	Name=Height_above_ear;B73v2_pos=1:19317737;1allele=G/A;version=Hapmap2;RS=rs1062329778;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	19570329	19570428	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19321520;1allele=G/A;version=Hapmap2;RS=rs128389617;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	19571149	19571248	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:19322340;1allele=C/T;version=Hapmap2;RS=rs844400249;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19574201	19574300	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19325392;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19577340	19577439	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:19328531;1allele=A/C;version=Hapmap1;RS=rs131218677;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	19755093	19755192	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:19559968;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19755166	19755265	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:19559895;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19788204	19788303	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:19526852;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19793318	19793417	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19521738;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19811449	19811548	.	+	.	Name=Height_above_ear;B73v2_pos=1:19636557;1allele=C/T;version=Hapmap2;RS=rs725438510;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	19858340	19858439	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:19680168;1allele=CCA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	19858379	19858478	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:19680207;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	20077932	20078031	.	+	.	Name=Height_above_ear;B73v2_pos=1:19910486;1allele=A/G;version=Hapmap2;RS=rs821751112;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	20078419	20078518	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19910973;1allele=C/T;version=Hapmap2;RS=rs128390516;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	20078447	20078546	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:19911001;1allele=A/T;version=Hapmap2;RS=rs128390517;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	20078745	20078844	.	+	.	Name=Days_to_silk;B73v2_pos=1:19911299;1allele=G/T;version=Hapmap2;RS=rs128390524;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	20141091	20141190	.	+	.	Name=Tassel_length;B73v2_pos=1:19972713;1allele=C/T;version=Hapmap1;RS=rs128390609;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	20161152	20161251	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:19992764;1allele=A/C;version=Hapmap2;RS=rs801501645;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	20256049	20256148	.	+	.	Name=Height_above_ear;B73v2_pos=1:20091707;1allele=T/A;version=Hapmap2;RS=rs128390756;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	20256750	20256849	.	+	.	Name=Ear_row_number;B73v2_pos=1:20092408;1allele=A/G;version=Hapmap2;RS=rs838206121;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	20257300	20257399	.	+	.	Name=Height_above_ear;B73v2_pos=1:20092958;1allele=G/A;version=Hapmap2;RS=rs814491444;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	20258607	20258706	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:20094265;1allele=G/A;version=Hapmap2;RS=rs838619996;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	20363245	20363344	.	+	.	Name=Height_above_ear;B73v2_pos=1:20190983;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21053120	21053219	.	+	.	Name=Sucrose;B73v2_pos=1:20917398;1allele=C/T;version=Hapmap2;RS=rs830875292;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21155545	21155644	.	+	.	Name=Sucrose;B73v2_pos=1:21007785;1allele=G/A;version=Hapmap2;RS=rs1063766105;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	21242916	21243015	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21087011;1allele=G/A;version=Hapmap2;RS=rs828909233;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21247828	21247927	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21091926;1allele=C/T;version=Hapmap2;RS=rs832401379;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21256163	21256262	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:21100260;1allele=G/A;version=Hapmap2;RS=rs841429911;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21260223	21260322	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21104320;1allele=C/T;version=Hapmap2;RS=rs812376655;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21292662	21292761	.	+	.	Name=Tassel_length;B73v2_pos=1:21136767;1allele=C/A;version=Hapmap2;RS=rs802221603;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	21332509	21332608	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21176615;1allele=A/G;version=Hapmap2;RS=rs808502689;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21342561	21342660	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21186681;1allele=C/T;version=Hapmap2;RS=rs841644535;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21351870	21351969	.	+	.	Name=Sucrose;B73v2_pos=1:21195991;1allele=G/A;version=Hapmap2;RS=rs1061668001;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	21414921	21415020	.	+	.	Name=Days_to_silk;B73v2_pos=1:21261300;1allele=A/T;version=Hapmap2;RS=rs848840225;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	21440609	21440708	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21274925;1allele=C/T;version=Hapmap2;RS=rs844794132;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21440951	21441050	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:21274583;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21440951	21441050	.	+	.	Name=Height_above_ear;B73v2_pos=1:21274583;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21445534	21445632	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21269998;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21460131	21460230	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21300816;1allele=G/A;version=Hapmap2;RS=rs725337278;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21460707	21460806	.	+	.	Name=Plant_height;B73v2_pos=1:21301392;1allele=C/T;version=Hapmap2;RS=rs822592259;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21545832	21545931	.	+	.	Name=Days_to_silk;B73v2_pos=1:21392043;1allele=C/A;version=Hapmap2;RS=rs834041716;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	21546807	21546906	.	+	.	Name=Days_to_silk;B73v2_pos=1:21393018;1allele=A/C;version=Hapmap2;RS=rs726647248;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	21549304	21549403	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21395515;1allele=T/C;version=Hapmap2;RS=rs276206580;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21556555	21556654	.	+	.	Name=Ear_height;B73v2_pos=1:21402767;1allele=A/G;version=Hapmap2;RS=rs128392926;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	21557016	21557115	.	+	.	Name=Days_to_silk;B73v2_pos=1:21403228;1allele=G/A;version=Hapmap2;RS=rs276206597;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21569603	21569702	.	+	.	Name=Sucrose;B73v2_pos=1:21415815;1allele=C/G;version=Hapmap2;RS=rs276206626;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	21592911	21593010	.	+	.	Name=Sucrose;B73v2_pos=1:21438099;1allele=C/T;version=Hapmap2;RS=rs128393023;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	21594531	21594629	.	+	.	Name=Sucrose;B73v2_pos=1:21439719;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21597981	21598080	.	+	.	Name=Sucrose;B73v2_pos=1:21443170;1allele=A/G;version=Hapmap2;RS=rs1060607208;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21600009	21600108	.	+	.	Name=Sucrose;B73v2_pos=1:21445198;1allele=G/A;version=Hapmap2;RS=rs821550793;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21611735	21611834	.	+	.	Name=Sucrose;B73v2_pos=1:21455910;1allele=C/T;version=Hapmap2;RS=rs128393114;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	21614807	21614906	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21458982;1allele=T/C;version=Hapmap2;RS=rs128393122;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	21619697	21619796	.	+	.	Name=Days_to_silk;B73v2_pos=1:21463872;1allele=T/C;version=Hapmap2;RS=rs128393146;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	21620651	21620750	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21464826;1allele=T/C;version=Hapmap2;RS=rs839548093;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	21696382	21696481	.	+	.	Name=Ear_height;B73v2_pos=1:21528659;1allele=C/T;version=Hapmap2;RS=rs276206786;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	21737837	21737936	.	+	.	Name=Sucrose;B73v2_pos=1:21571263;1allele=C/A;version=Hapmap1;RS=rs131220278;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	21737899	21737998	.	+	.	Name=Tassel_length;B73v2_pos=1:21571325;1allele=C/G;version=Hapmap2;RS=rs816048797;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	21740165	21740264	.	+	.	Name=Plant_height;B73v2_pos=1:21573591;1allele=G/T;version=Hapmap2;RS=rs824302254;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	21750330	21750429	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21599482;1allele=A/C;version=Hapmap2;RS=rs276206880;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	21752960	21753059	.	+	.	Name=Tassel_length;B73v2_pos=1:21602112;1allele=A/C;version=Hapmap2;RS=rs131220296;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	21752994	21753093	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21602146;1allele=C/T;version=Hapmap2;RS=rs725227068;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	21753050	21753149	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21602202;1allele=C/G;version=Hapmap2;RS=rs276206901;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	21763103	21763202	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21612257;1allele=T/A;version=Hapmap2;RS=rs831460129;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	21790344	21790443	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21638800;1allele=G/A;version=Hapmap2;RS=rs803579984;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	21790344	21790443	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21638800;1allele=G/A;version=Hapmap2;RS=rs803579984;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	21795607	21795706	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21644063;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21829177	21829276	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:21682106;1allele=A/G;version=Hapmap2;RS=rs828513467;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	21829273	21829372	.	+	.	Name=Sucrose;B73v2_pos=1:21682202;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21829282	21829381	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21682211;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	21829341	21829440	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21682270;1allele=T/G;version=Hapmap2;RS=rs128393487;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	21831729	21831828	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:21684658;1allele=C/A;version=Hapmap2;RS=rs276206936;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	21835107	21835206	.	+	.	Name=Sucrose;B73v2_pos=1:21688036;1allele=T/G;version=Hapmap2;RS=rs128393525;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	21837338	21837437	.	+	.	Name=Height_above_ear;B73v2_pos=1:21690267;1allele=A/T;version=Hapmap2;RS=rs128393539;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	21837477	21837576	.	+	.	Name=Height_above_ear;B73v2_pos=1:21690406;1allele=A/C;version=Hapmap2;RS=rs830277149;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	21839482	21839581	.	+	.	Name=Height_above_ear;B73v2_pos=1:21692411;1allele=C/G;version=Hapmap2;RS=rs128393562;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	21843161	21843260	.	+	.	Name=Ear_height;B73v2_pos=1:21696090;1allele=T/C;version=Hapmap2;RS=rs128393584;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21845976	21846075	.	+	.	Name=Days_to_silk;B73v2_pos=1:21698905;1allele=C/A;version=Hapmap2;RS=rs276207005;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21846500	21846599	.	+	.	Name=Days_to_silk;B73v2_pos=1:21699429;1allele=G/A;version=Hapmap2;RS=rs276207007;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21847831	21847930	.	+	.	Name=Plant_height;B73v2_pos=1:21700760;1allele=A/C;version=Hapmap2;RS=rs826095895;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	21849625	21849724	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:21702554;1allele=G/A;version=Hapmap1;RS=rs131220466;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	21859937	21860036	.	+	.	Name=Sucrose;B73v2_pos=1:21712865;1allele=T/C;version=Hapmap2;RS=rs815241008;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21863362	21863461	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:21716290;1allele=C/T;version=Hapmap2;RS=rs830959173;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	21869437	21869536	.	+	.	Name=Stalk_strength;B73v2_pos=1:21722365;1allele=T/C;version=Hapmap2;RS=rs838748171;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	21871330	21871429	.	+	.	Name=Days_to_silk;B73v2_pos=1:21724258;1allele=G/C;version=Hapmap2;RS=rs128393732;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	21885273	21885372	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:21738206;1allele=G/C;version=Hapmap2;RS=rs276207094;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	21903378	21903477	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:21756319;1allele=A/G;version=Hapmap2;RS=rs128393757;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22018944	22019043	.	+	.	Name=Days_to_silk;B73v2_pos=1:21886967;1allele=C/T;version=Hapmap2;RS=rs808812650;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	22125738	22125837	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:21994993;1allele=C/T;version=Hapmap2;RS=rs724850013;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	22125738	22125837	.	+	.	Name=Sucrose;B73v2_pos=1:21994993;1allele=C/T;version=Hapmap2;RS=rs724850013;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	22202588	22202687	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:22007087;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	22204852	22204943	.	+	.	Name=Days_to_silk;B73v2_pos=1:22009569;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	22209534	22209633	.	+	.	Name=Sucrose;B73v2_pos=1:22014259;1allele=A/G;version=Hapmap2;RS=rs849990363;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22256825	22256924	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:22067246;1allele=A/G;version=Hapmap2;RS=rs805682634;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22256825	22256924	.	+	.	Name=Sucrose;B73v2_pos=1:22067246;1allele=A/G;version=Hapmap2;RS=rs805682634;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22261590	22261689	.	+	.	Name=Days_to_silk;B73v2_pos=1:22072011;1allele=C/T;version=Hapmap2;RS=rs837029871;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	22338407	22338506	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:22180636;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	22435557	22435656	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:22247033;1allele=A/G;version=Hapmap1;RS=rs128394562;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	22442288	22442387	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:22253764;1allele=A/G;version=Hapmap2;RS=rs1061509959;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22499568	22499667	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:22312762;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	22505172	22505271	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:22318366;1allele=G/C;version=Hapmap2;RS=rs276207669;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	22548946	22549045	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:22362971;1allele=G/A;version=Hapmap2;RS=rs841233093;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	22558770	22558869	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:22372796;1allele=C/T;version=Hapmap2;RS=rs1061156971;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	22572587	22572686	.	+	.	Name=Ear_height;B73v2_pos=1:22386613;1allele=G/A;version=Hapmap2;RS=rs1060627950;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	22621080	22621179	.	+	.	Name=Days_to_silk;B73v2_pos=1:22463173;1allele=A/T;version=Hapmap2;RS=rs846296310;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	22622029	22622128	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:22464122;1allele=T/C;version=Hapmap2;RS=rs829434150;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	22623066	22623165	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:22465159;1allele=T/G;version=Hapmap2;RS=rs726389767;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	22624371	22624471	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:22466464;1allele=G/A;version=Hapmap2;RS=rs725556913;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22626692	22626791	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:22468784;1allele=C/A;version=Hapmap2;RS=rs848827371;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	22643256	22643355	.	+	.	Name=Ear_row_number;B73v2_pos=1:22431930;1allele=C/G;version=Hapmap2;RS=rs128394741;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	22643829	22643928	.	+	.	Name=Leaf_length;B73v2_pos=1:22432503;1allele=G/A;version=Hapmap2;RS=rs809774968;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22651031	22651130	.	+	.	Name=Height_above_ear;B73v2_pos=1:22439705;1allele=G/A;version=Hapmap2;RS=rs131221101;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22651090	22651189	.	+	.	Name=Height_above_ear;B73v2_pos=1:22439764;1allele=G/A;version=Hapmap1;RS=rs131221108;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22680919	22681018	.	+	.	Name=Stalk_strength;B73v2_pos=1:22491882;1allele=C/T;version=Hapmap2;RS=rs805829033;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	22691040	22691139	.	+	.	Name=Stalk_strength;B73v2_pos=1:22502003;1allele=C/T;version=Hapmap2;RS=rs804587303;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	22700970	22701069	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:22511933;1allele=T/C;version=Hapmap2;RS=rs842713012;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	22816273	22816372	.	+	.	Name=Tassel_length;B73v2_pos=1:22633504;1allele=G/A;version=Hapmap2;RS=rs832956572;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	22817081	22817180	.	+	.	Name=Ear_height;B73v2_pos=1:22634312;1allele=C/T;version=Hapmap2;RS=rs128395319;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	22819333	22819432	.	+	.	Name=Ear_height;B73v2_pos=1:22636564;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	22821552	22821651	.	+	.	Name=Starch;B73v2_pos=1:22638783;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	22823699	22823798	.	+	.	Name=Height_above_ear;B73v2_pos=1:22640930;1allele=G/A;version=Hapmap2;RS=rs128395346;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	22824865	22824964	.	+	.	Name=Ear_row_number;B73v2_pos=1:22642096;1allele=A/C;version=Hapmap2;RS=rs131221513;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	22826581	22826680	.	+	.	Name=Stalk_strength;B73v2_pos=1:22643812;1allele=T/C;version=Hapmap2;RS=rs813511550;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	22826924	22827023	.	+	.	Name=Stalk_strength;B73v2_pos=1:22644155;1allele=G/T;version=Hapmap2;RS=rs830772688;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	22826939	22827038	.	+	.	Name=Stalk_strength;B73v2_pos=1:22644170;1allele=C/T;version=Hapmap2;RS=rs276208045;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	22889380	22889479	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:22707316;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	22926944	22927043	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:22744948;1allele=C/T;version=Hapmap2;RS=rs128395515;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	22989384	22989483	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:22805304;1allele=C/G;version=Hapmap2;RS=rs838940485;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	23033572	23033671	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:22849491;1allele=C/T;version=Hapmap2;RS=rs1064141504;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23037744	23037843	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:22853664;1allele=C/T;version=Hapmap2;RS=rs1063417877;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23041700	23041799	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:22857620;1allele=G/A;version=Hapmap2;RS=rs1063951247;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23072387	23072486	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:22888251;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23179915	23180014	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:22987420;1allele=C/T;version=Hapmap2;RS=rs726170731;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	23242648	23242747	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23048709;1allele=C/T;version=Hapmap2;RS=rs131221874;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23249130	23249229	.	+	.	Name=Ear_row_number;B73v2_pos=1:23055191;1allele=G/A;version=Hapmap2;RS=rs128395769;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23249769	23249868	.	+	.	Name=Tassel_length;B73v2_pos=1:23055830;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23250270	23250369	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23056331;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23250422	23250521	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23056483;1allele=C/G;version=Hapmap2;RS=rs807375417;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	23259500	23259599	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23065562;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23260037	23260136	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23066099;1allele=A/G;version=Hapmap2;RS=rs837961261;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23260437	23260536	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23066499;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23260586	23260685	.	+	.	Name=Ear_height;B73v2_pos=1:23066648;1allele=T/G;version=Hapmap2;RS=rs804374844;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	23260586	23260685	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23066648;1allele=T/G;version=Hapmap2;RS=rs804374844;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	23260667	23260766	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23066729;1allele=A/G;version=Hapmap2;RS=rs825790623;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	23260732	23260831	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23066794;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23276765	23276864	.	+	.	Name=Leaf_width;B73v2_pos=1:23082827;1allele=C/T;version=Hapmap2;RS=rs826873458;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	23276809	23276908	.	+	.	Name=Leaf_width;B73v2_pos=1:23082871;1allele=A/T;version=Hapmap2;RS=rs813205876;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	23292392	23292491	.	+	.	Name=Ear_height;B73v2_pos=1:23097946;1allele=C/G;version=Hapmap2;RS=rs128395790;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	23292425	23292524	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23097979;1allele=T/C;version=Hapmap2;RS=rs1063371482;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	23293459	23293558	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23099013;1allele=C/A;version=Hapmap2;RS=rs276208380;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	23293459	23293558	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23099013;1allele=C/A;version=Hapmap2;RS=rs276208380;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	23293473	23293572	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23099027;1allele=A/G;version=Hapmap2;RS=rs842083349;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	23294267	23294366	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23099821;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23296192	23296291	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23101746;1allele=G/A;version=Hapmap2;RS=rs837497872;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23297651	23297750	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23103205;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23303511	23303610	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23109066;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23303673	23303772	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23109228;1allele=A/G;version=Hapmap1;RS=rs128395826;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23311919	23312018	.	+	.	Name=Height_above_ear;B73v2_pos=1:23117474;1allele=C/G;version=Hapmap2;RS=rs848512057;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	23369721	23369820	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:23192791;1allele=A/T;version=Hapmap2;RS=rs128395863;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	23378467	23378566	.	+	.	Name=Ear_height;B73v2_pos=1:23201538;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23378468	23378567	.	+	.	Name=Ear_height;B73v2_pos=1:23201539;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23417365	23417464	.	+	.	Name=Ear_height;B73v2_pos=1:23224995;1allele=T/C;version=Hapmap2;RS=rs128396005;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23426817	23426916	.	+	.	Name=Tassel_length;B73v2_pos=1:23234447;1allele=A/G;version=Hapmap2;RS=rs131222222;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23427999	23428098	.	+	.	Name=Tassel_length;B73v2_pos=1:23235629;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23428136	23428235	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23235766;1allele=/GT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23428180	23428279	.	+	.	Name=Tassel_length;B73v2_pos=1:23235810;1allele=/CG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23428857	23428956	.	+	.	Name=Stalk_strength;B73v2_pos=1:23236487;1allele=C/T;version=Hapmap2;RS=rs1064011509;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23430393	23430492	.	+	.	Name=Ear_height;B73v2_pos=1:23237973;1allele=C/A;version=Hapmap2;RS=rs841470390;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	23430666	23430765	.	+	.	Name=Ear_height;B73v2_pos=1:23238246;1allele=T/A;version=Hapmap2;RS=rs128396055;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	23430786	23430885	.	+	.	Name=Ear_height;B73v2_pos=1:23238366;1allele=A/G;version=Hapmap2;RS=rs276208555;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23434631	23434730	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23242205;1allele=C/G;version=Hapmap1;RS=rs128396075;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	23435074	23435173	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23242648;1allele=T/A;version=Hapmap2;RS=rs128396078;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	23435283	23435382	.	+	.	Name=Ear_height;B73v2_pos=1:23242857;1allele=T/C;version=Hapmap2;RS=rs128396081;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	23435354	23435453	.	+	.	Name=Stalk_strength;B73v2_pos=1:23242928;1allele=C/T;version=Hapmap2;RS=rs1063641239;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23442489	23442588	.	+	.	Name=Tassel_length;B73v2_pos=1:23250063;1allele=G/C;version=Hapmap1;RS=rs131222327;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	23508904	23509003	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:23316483;1allele=A/C;version=Hapmap2;RS=rs810611663;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	23540342	23540441	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:76548268;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23597747	23597846	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23401419;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23643951	23644050	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:23448174;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23764828	23764927	.	+	.	Name=Stalk_strength;B73v2_pos=1:23560466;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23765878	23765977	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:23561516;1allele=T/C;version=Hapmap2;RS=rs128396344;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23765900	23765999	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:23561538;1allele=A/G;version=Hapmap2;RS=rs128396342;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23767960	23768059	.	+	.	Name=Leaf_width;B73v2_pos=1:23563598;1allele=T/C;version=Hapmap2;RS=rs725546630;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23768633	23768732	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23564271;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23768903	23769002	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:23564541;1allele=C/G;version=Hapmap1;RS=rs131222585;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	23769268	23769367	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:23564906;1allele=G/A;version=Hapmap1;RS=rs131222574;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	23769403	23769502	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:23565041;1allele=T/G;version=Hapmap2;RS=rs128396334;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	23771070	23771169	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23566708;1allele=G/A;version=Hapmap2;RS=rs128396332;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	23783559	23783658	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23579197;1allele=T/C;version=Hapmap2;RS=rs128396309;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	23793019	23793118	.	+	.	Name=Height_above_ear;B73v2_pos=1:23588660;1allele=G/T;version=Hapmap2;RS=rs844397235;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	23793378	23793477	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23589019;1allele=C/A;version=Hapmap1;RS=rs131222442;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	23793400	23793499	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23589041;1allele=T/C;version=Hapmap2;RS=rs131222441;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	23800028	23800127	.	+	.	Name=Leaf_length;B73v2_pos=1:23595669;1allele=A/T;version=Hapmap2;RS=rs841741861;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	23800030	23800129	.	+	.	Name=Leaf_length;B73v2_pos=1:23595671;1allele=A/G;version=Hapmap2;RS=rs834191743;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23814370	23814469	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23610010;1allele=C/T;version=Hapmap2;RS=rs128396435;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23831112	23831211	.	+	.	Name=Ear_height;B73v2_pos=1:23626752;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23838190	23838289	.	+	.	Name=Fructose;B73v2_pos=1:23633831;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23848118	23848217	.	+	.	Name=Height_above_ear;B73v2_pos=1:23643759;1allele=T/C;version=Hapmap2;RS=rs276208751;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	23858205	23858304	.	+	.	Name=Height_above_ear;B73v2_pos=1:23653846;1allele=A/G;version=Hapmap2;RS=rs128396581;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23858926	23859025	.	+	.	Name=Height_above_ear;B73v2_pos=1:23654567;1allele=A/G;version=Hapmap2;RS=rs839085594;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	23875826	23875925	.	+	.	Name=Height_above_ear;B73v2_pos=1:23671467;1allele=A/G;version=Hapmap2;RS=rs276208895;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	23876371	23876470	.	+	.	Name=Height_above_ear;B73v2_pos=1:23672012;1allele=T/A;version=Hapmap2;RS=rs1061985855;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	23918612	23918711	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:23731538;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23925925	23926024	.	+	.	Name=Ear_height;B73v2_pos=1:23724225;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23937351	23937450	.	+	.	Name=Ear_row_number;B73v2_pos=1:23712797;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23938428	23938527	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:23711720;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23938983	23939082	.	+	.	Name=Days_to_silk;B73v2_pos=1:23711165;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23940955	23941054	.	+	.	Name=Cob_diameter;B73v2_pos=1:23709193;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	23978803	23978902	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:23766458;1allele=G/A;version=Hapmap2;RS=rs839136572;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24033006	24033105	.	+	.	Name=Days_to_silk;B73v2_pos=1:23877900;1allele=G/A;version=Hapmap2;RS=rs802917870;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	24076850	24076949	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:23921757;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24077646	24077745	.	+	.	Name=Sucrose;B73v2_pos=1:23922553;1allele=T/A;version=Hapmap2;RS=rs838127473;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	24079887	24079986	.	+	.	Name=Cob_diameter;B73v2_pos=1:23924794;1allele=C/A;version=Hapmap1;RS=rs724456573;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24082988	24083087	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:23927895;1allele=C/T;version=Hapmap2;RS=rs806924462;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24090474	24090573	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:23935382;1allele=G/A;version=Hapmap2;RS=rs128397031;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24092592	24092691	.	+	.	Name=Leaf_length;B73v2_pos=1:23937500;1allele=C/G;version=Hapmap2;RS=rs131222817;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	24092742	24092841	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:23937650;1allele=G/A;version=Hapmap2;RS=rs131222814;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	24113945	24114044	.	+	.	Name=Sucrose;B73v2_pos=1:23966317;1allele=C/T;version=Hapmap2;RS=rs128397142;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	24114503	24114602	.	+	.	Name=Sucrose;B73v2_pos=1:23966875;1allele=T/C;version=Hapmap2;RS=rs128397146;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24118937	24119036	.	+	.	Name=Ear_height;B73v2_pos=1:23971309;1allele=G/A;version=Hapmap2;RS=rs276209157;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24155114	24155213	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:24007498;1allele=G/A;version=Hapmap2;RS=rs806289536;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24155529	24155628	.	+	.	Name=Days_to_silk;B73v2_pos=1:24007913;1allele=C/T;version=Hapmap2;RS=rs276209174;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24166824	24166923	.	+	.	Name=Ear_height;B73v2_pos=1:24019209;1allele=C/T;version=Hapmap2;RS=rs1061531877;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	24167074	24167173	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:24019459;1allele=T/A;version=Hapmap2;RS=rs276209185;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	24167436	24167535	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:24019821;1allele=C/T;version=Hapmap2;RS=rs843436428;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24170791	24170890	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:24023176;1allele=C/T;version=Hapmap2;RS=rs1063769159;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	24170791	24170890	.	+	.	Name=Ear_height;B73v2_pos=1:24023176;1allele=C/T;version=Hapmap2;RS=rs1063769159;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	24171456	24171555	.	+	.	Name=Sucrose;B73v2_pos=1:24023841;1allele=A/G;version=Hapmap2;RS=rs827475102;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24171456	24171555	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:24023841;1allele=A/G;version=Hapmap2;RS=rs827475102;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24172334	24172433	.	+	.	Name=Sucrose;B73v2_pos=1:24024719;1allele=G/A;version=Hapmap2;RS=rs276209199;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24180814	24180913	.	+	.	Name=Ear_height;B73v2_pos=1:24033197;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24183805	24183904	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:24036188;1allele=T/C;version=Hapmap2;RS=rs804704524;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	24192933	24193032	.	+	.	Name=Days_to_silk;B73v2_pos=1:24045317;1allele=G/A;version=Hapmap2;RS=rs828942221;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24193348	24193447	.	+	.	Name=Ear_height;B73v2_pos=1:24045732;1allele=G/A;version=Hapmap2;RS=rs128397237;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24203042	24203141	.	+	.	Name=Ear_row_number;B73v2_pos=1:24055427;1allele=T/C;version=Hapmap2;RS=rs276209236;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24257261	24257360	.	+	.	Name=Ear_height;B73v2_pos=1:24110986;1allele=T/C;version=Hapmap2;RS=rs815481764;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24260883	24260982	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:24114608;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24264176	24264275	.	+	.	Name=Leaf_width;B73v2_pos=1:24117901;1allele=G/A;version=Hapmap2;RS=rs805878787;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24336871	24336970	.	+	.	Name=Tassel_length;B73v2_pos=1:24190594;1allele=G/A;version=Hapmap2;RS=rs839175679;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24337187	24337286	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:24190910;1allele=T/G;version=Hapmap1;RS=rs131223085;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	24350256	24350355	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:24203823;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24350960	24351059	.	+	.	Name=Leaf_length;B73v2_pos=1:24204527;1allele=T/C;version=Hapmap2;RS=rs843448402;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	24352863	24352962	.	+	.	Name=Sucrose;B73v2_pos=1:24206430;1allele=T/A;version=Hapmap2;RS=rs128397363;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	24353024	24353123	.	+	.	Name=Sucrose;B73v2_pos=1:24206591;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24356146	24356245	.	+	.	Name=Tassel_length;B73v2_pos=1:24209713;1allele=A/C;version=Hapmap2;RS=rs128397386;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	24371944	24372043	.	+	.	Name=Ear_height;B73v2_pos=1:24225511;1allele=T/C;version=Hapmap2;RS=rs276209409;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24404922	24405021	.	+	.	Name=Leaf_width;B73v2_pos=1:24258972;1allele=A/G;version=Hapmap2;RS=rs824345804;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24449818	24449917	.	+	.	Name=Ear_height;B73v2_pos=1:24303592;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24449939	24450038	.	+	.	Name=Ear_height;B73v2_pos=1:24303713;1allele=A/G;version=Hapmap2;RS=rs276209456;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24452925	24453024	.	+	.	Name=Leaf_length;B73v2_pos=1:24306696;1allele=A/G;version=Hapmap2;RS=rs276209465;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24453527	24453626	.	+	.	Name=Ear_height;B73v2_pos=1:24307298;1allele=G/C;version=Hapmap1;RS=rs131223403;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	24453527	24453626	.	+	.	Name=Cob_diameter;B73v2_pos=1:24307298;1allele=G/C;version=Hapmap1;RS=rs131223403;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	24654693	24654792	.	+	.	Name=Tassel_length;B73v2_pos=1:24508945;1allele=A/G;version=Hapmap2;RS=rs840817010;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24731026	24731125	.	+	.	Name=Ear_height;B73v2_pos=1:24585280;1allele=T/C;version=Hapmap2;RS=rs128397744;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	24749675	24749774	.	+	.	Name=Ear_height;B73v2_pos=1:24603706;1allele=A/G;version=Hapmap2;RS=rs131223662;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24825523	24825622	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:24670736;1allele=G/A;version=Hapmap2;RS=rs131223678;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24826583	24826682	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:24671796;1allele=G/T;version=Hapmap1;RS=rs844570900;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	24827990	24828089	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:24673203;1allele=G/A;version=Hapmap1;RS=rs1063510616;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	24833373	24833472	.	+	.	Name=Plant_height;B73v2_pos=1:24678586;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24833373	24833472	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:24678586;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24834690	24834789	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:24679903;1allele=G/A;version=Hapmap2;RS=rs808290530;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	24838465	24838564	.	+	.	Name=Stalk_strength;B73v2_pos=1:24683677;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24901540	24901639	.	+	.	Name=Height_above_ear;B73v2_pos=1:24746284;1allele=A/G;version=Hapmap2;RS=rs128397987;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	24933924	24934023	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:24778052;1allele=T/G;version=Hapmap2;RS=rs276209976;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	24952242	24952341	.	+	.	Name=Ear_height;B73v2_pos=1:24796071;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	24987913	24988012	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:24832388;1allele=T/A;version=Hapmap2;RS=rs850141723;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	24988438	24988537	.	+	.	Name=Ear_height;B73v2_pos=1:24832914;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25060523	25060622	.	+	.	Name=Height_above_ear;B73v2_pos=1:24904073;1allele=C/T;version=Hapmap2;RS=rs812631241;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	25088076	25088175	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:24931627;1allele=A/T;version=Hapmap1;RS=rs128398662;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	25094234	25094332	.	+	.	Name=Tassel_length;B73v2_pos=1:24937786;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25094248	25094345	.	+	.	Name=Tassel_length;B73v2_pos=1:24937799;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25099490	25099589	.	+	.	Name=Stalk_strength;B73v2_pos=1:24943051;1allele=A/C;version=Hapmap2;RS=rs128398734;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	25103386	25103485	.	+	.	Name=Stalk_strength;B73v2_pos=1:24947541;1allele=G/A;version=Hapmap2;RS=rs836358114;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25232718	25232817	.	+	.	Name=Stalk_strength;B73v2_pos=1:25072561;1allele=A/C;version=Hapmap2;RS=rs807212750;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	25258017	25258116	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:25097860;1allele=T/C;version=Hapmap2;RS=rs827740593;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	25261760	25261859	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:25101603;1allele=A/C;version=Hapmap2;RS=rs131224087;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	25264443	25264542	.	+	.	Name=Tassel_length;B73v2_pos=1:25104286;1allele=G/A;version=Hapmap2;RS=rs128398882;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25264464	25264563	.	+	.	Name=Tassel_length;B73v2_pos=1:25104307;1allele=T/G;version=Hapmap2;RS=rs128398881;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	25265244	25265343	.	+	.	Name=Tassel_length;B73v2_pos=1:25105087;1allele=ATTCG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25368940	25369039	.	+	.	Name=Ear_height;B73v2_pos=1:25209652;1allele=A/G;version=Hapmap2;RS=rs128399332;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25393866	25393965	.	+	.	Name=Ear_height;B73v2_pos=1:25281403;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25400608	25400707	.	+	.	Name=Stalk_strength;B73v2_pos=1:25288145;1allele=G/A;version=Hapmap2;RS=rs818996823;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25403238	25403337	.	+	.	Name=Plant_height;B73v2_pos=1:25290775;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25418251	25418350	.	+	.	Name=Plant_height;B73v2_pos=1:25305798;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25427838	25427937	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:25315385;1allele=A/G;version=Hapmap2;RS=rs806506564;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	25430555	25430654	.	+	.	Name=Ear_height;B73v2_pos=1:25318102;1allele=C/T;version=Hapmap2;RS=rs128399623;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	25478940	25479039	.	+	.	Name=Height_above_ear;B73v2_pos=1:25370403;1allele=A/G;version=Hapmap2;RS=rs128399663;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	25482671	25482770	.	+	.	Name=Stalk_strength;B73v2_pos=1:25374134;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25483031	25483130	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:25374494;1allele=C/T;version=Hapmap2;RS=rs131224267;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	25483080	25483179	.	+	.	Name=Ear_height;B73v2_pos=1:25374543;1allele=T/C;version=Hapmap2;RS=rs131224271;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	25483088	25483187	.	+	.	Name=Leaf_width;B73v2_pos=1:25374551;1allele=C/G;version=Hapmap2;RS=rs131224272;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	25483861	25483960	.	+	.	Name=Tassel_length;B73v2_pos=1:25375324;1allele=G/C;version=Hapmap2;RS=rs810610464;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	25485501	25485600	.	+	.	Name=Tassel_length;B73v2_pos=1:25376964;1allele=A/G;version=Hapmap1;RS=rs128399715;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	25488760	25488859	.	+	.	Name=Tassel_length;B73v2_pos=1:25380223;1allele=G/T;version=Hapmap2;RS=rs819128474;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	25489014	25489113	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:25380477;1allele=A/T;version=Hapmap2;RS=rs823515116;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	25503427	25503526	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:25394485;1allele=A/C;version=Hapmap2;RS=rs128399751;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	25510299	25510398	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:25401357;1allele=A/G;version=Hapmap2;RS=rs817421785;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25518773	25518872	.	+	.	Name=Tassel_length;B73v2_pos=1:25409831;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25522374	25522473	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:25413432;1allele=G/C;version=Hapmap2;RS=rs828284688;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	25531440	25531539	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:25422498;1allele=G/C;version=Hapmap2;RS=rs128399928;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	25533875	25533974	.	+	.	Name=Tassel_length;B73v2_pos=1:25424933;1allele=A/T;version=Hapmap2;RS=rs835790927;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	25534602	25534701	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:25425660;1allele=G/A;version=Hapmap2;RS=rs131224583;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25569782	25569881	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:25452752;1allele=A/G;version=Hapmap2;RS=rs276210773;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25608896	25608995	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:25545281;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	25777427	25777526	.	+	.	Name=Leaf_width;B73v2_pos=1:25716064;1allele=C/G;version=Hapmap2;RS=rs839612836;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	25803457	25803556	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:25739863;1allele=C/T;version=Hapmap2;RS=rs128400416;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	25805009	25805108	.	+	.	Name=Glutamate;B73v2_pos=1:25741415;1allele=G/A;version=Hapmap2;RS=rs813878183;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	25827524	25827623	.	+	.	Name=Ear_height;B73v2_pos=1:25765677;1allele=G/A;version=Hapmap2;RS=rs128400497;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	25894398	25894497	.	+	.	Name=Leaf_length;B73v2_pos=1:25818019;1allele=A/C;version=Hapmap2;RS=rs820447571;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	25905440	25905539	.	+	.	Name=Starch;B73v2_pos=1:25829061;1allele=C/A;version=Hapmap2;RS=rs821693305;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	25944165	25944264	.	+	.	Name=Tassel_length;B73v2_pos=1:25882289;1allele=C/T;version=Hapmap2;RS=rs821770000;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	25997889	25997988	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:25936906;1allele=G/A;version=Hapmap2;RS=rs812738502;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	26127124	26127223	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:26166924;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	26127260	26127359	.	+	.	Name=Leaf_width;B73v2_pos=1:26167060;1allele=T/G;version=Hapmap2;RS=rs850296804;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	26131003	26131102	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:26170803;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	26131686	26131785	.	+	.	Name=Leaf_width;B73v2_pos=1:26171486;1allele=A/T;version=Hapmap2;RS=rs836003520;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	26154422	26154521	.	+	.	Name=Leaf_width;B73v2_pos=1:26212995;1allele=A/T;version=Hapmap2;RS=rs835729423;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	26155601	26155700	.	+	.	Name=Ear_row_number;B73v2_pos=1:26214174;1allele=T/C;version=Hapmap2;RS=rs128401475;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26167170	26167269	.	+	.	Name=Leaf_width;B73v2_pos=1:26225743;1allele=C/T;version=Hapmap2;RS=rs824193096;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26186803	26186902	.	+	.	Name=Leaf_width;B73v2_pos=1:26237401;1allele=T/G;version=Hapmap2;RS=rs819390832;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	26188118	26188217	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:26193039;1allele=C/T;version=Hapmap2;RS=rs822205306;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	26192147	26192246	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:26197068;1allele=T/C;version=Hapmap2;RS=rs813276628;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	26199132	26199231	.	+	.	Name=Leaf_width;B73v2_pos=1:26204053;1allele=A/G;version=Hapmap2;RS=rs276211695;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	26200545	26200644	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:26205466;1allele=A/G;version=Hapmap2;RS=rs833125456;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	26213777	26213876	.	+	.	Name=Leaf_width;B73v2_pos=1:26259911;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	26215686	26215785	.	+	.	Name=Plant_height;B73v2_pos=1:26258002;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	26215686	26215785	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:26258002;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	26277184	26277283	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:26321814;1allele=T/C;version=Hapmap2;RS=rs846931697;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26284982	26285081	.	+	.	Name=Plant_height;B73v2_pos=1:26329612;1allele=C/T;version=Hapmap2;RS=rs276211966;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	26358009	26358108	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:26370180;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	26377289	26377388	.	+	.	Name=Tassel_length;B73v2_pos=1:26436841;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	26493478	26493577	.	+	.	Name=Plant_height;B73v2_pos=1:26534674;1allele=G/A;version=Hapmap1;RS=rs131225269;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	26529258	26529357	.	+	.	Name=Tassel_length;B73v2_pos=1:26570083;1allele=G/A;version=Hapmap2;RS=rs839976418;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	26530863	26530962	.	+	.	Name=Tassel_length;B73v2_pos=1:26571688;1allele=A/C;version=Hapmap2;RS=rs725715891;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	26532637	26532736	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:26573462;1allele=C/G;version=Hapmap2;RS=rs128402020;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	26533309	26533408	.	+	.	Name=Tassel_length;B73v2_pos=1:26574134;1allele=A/G;version=Hapmap2;RS=rs837704076;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	26533891	26533990	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:26574712;1allele=C/A;version=Hapmap1;RS=rs131225323;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26533891	26533990	.	+	.	Name=Ear_height;B73v2_pos=1:26574712;1allele=C/A;version=Hapmap1;RS=rs131225323;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26538231	26538330	.	+	.	Name=Leaf_width;B73v2_pos=1:26579052;1allele=C/T;version=Hapmap2;RS=rs837966378;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26538241	26538340	.	+	.	Name=Leaf_width;B73v2_pos=1:26579062;1allele=G/C;version=Hapmap2;RS=rs845049943;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	26540966	26541065	.	+	.	Name=Tassel_length;B73v2_pos=1:26581787;1allele=C/T;version=Hapmap2;RS=rs818191536;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26641856	26641955	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:26674613;1allele=T/C;version=Hapmap2;RS=rs128402091;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26649227	26649326	.	+	.	Name=Leaf_width;B73v2_pos=1:26681984;1allele=G/A;version=Hapmap2;RS=rs849425410;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	26668044	26668143	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:26700799;1allele=C/T;version=Hapmap2;RS=rs821487072;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26676888	26676987	.	+	.	Name=Tassel_length;B73v2_pos=1:26709643;1allele=G/A;version=Hapmap2;RS=rs840935858;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	26779664	26779763	.	+	.	Name=Leaf_width;B73v2_pos=1:26792950;1allele=C/T;version=Hapmap2;RS=rs840815656;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26877142	26877241	.	+	.	Name=Plant_height;B73v2_pos=1:26939287;1allele=T/C;version=Hapmap2;RS=rs1064444394;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26881482	26881581	.	+	.	Name=Plant_height;B73v2_pos=1:26943627;1allele=G/T;version=Hapmap2;RS=rs1062086185;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	26990267	26990366	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:27052046;1allele=C/T;version=Hapmap2;RS=rs838936781;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	26991534	26991633	.	+	.	Name=Plant_height;B73v2_pos=1:27053313;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27026335	27026434	.	+	.	Name=Plant_height;B73v2_pos=1:27088114;1allele=T/G;version=Hapmap2;RS=rs1061336192;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	27036384	27036483	.	+	.	Name=Plant_height;B73v2_pos=1:27098163;1allele=T/C;version=Hapmap2;RS=rs276212677;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	27039684	27039783	.	+	.	Name=Plant_height;B73v2_pos=1:27101463;1allele=G/T;version=Hapmap1;RS=rs131225757;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27046104	27046203	.	+	.	Name=Leaf_length;B73v2_pos=1:27107883;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27052754	27052853	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:27114529;1allele=A/G;version=Hapmap2;RS=rs1063882930;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27054411	27054510	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:27116186;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27054411	27054510	.	+	.	Name=Starch;B73v2_pos=1:27116186;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27061040	27061139	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:27122815;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27061783	27061882	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:27123558;1allele=A/G;version=Hapmap1;RS=rs131225989;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	27069649	27069748	.	+	.	Name=Leaf_length;B73v2_pos=1:27131424;1allele=G/C;version=Hapmap2;RS=rs830567039;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	27071244	27071343	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:27133019;1allele=G/A;version=Hapmap2;RS=rs816186254;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27076134	27076233	.	+	.	Name=Starch;B73v2_pos=1:27137909;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27077188	27077287	.	+	.	Name=Plant_height;B73v2_pos=1:27138963;1allele=/GTCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27094890	27094989	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:27156666;1allele=T/C;version=Hapmap2;RS=rs809944532;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	27127850	27127949	.	+	.	Name=Plant_height;B73v2_pos=1:27246223;1allele=T/C;version=Hapmap2;RS=rs819755287;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	27203545	27203644	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:27216835;1allele=G/A;version=Hapmap2;RS=rs726208365;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27256402	27256501	.	+	.	Name=Plant_height;B73v2_pos=1:27307013;1allele=G/A;version=Hapmap2;RS=rs128403420;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27270796	27270895	.	+	.	Name=Plant_height;B73v2_pos=1:27321893;1allele=C/T;version=Hapmap2;RS=rs276213017;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	27318249	27318349	.	+	.	Name=Leaf_width;B73v2_pos=1:27372955;1allele=C/T;version=Hapmap2;RS=rs1061039956;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	27321221	27321320	.	+	.	Name=Plant_height;B73v2_pos=1:27375926;1allele=C/T;version=Hapmap2;RS=rs128403588;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	27321221	27321320	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:27375926;1allele=C/T;version=Hapmap2;RS=rs128403588;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	27322579	27322678	.	+	.	Name=Plant_height;B73v2_pos=1:27377284;1allele=G/C;version=Hapmap2;RS=rs128403566;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	27322970	27323069	.	+	.	Name=Plant_height;B73v2_pos=1:27377675;1allele=A/G;version=Hapmap2;RS=rs276213099;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27329344	27329443	.	+	.	Name=Plant_height;B73v2_pos=1:27384049;1allele=G/C;version=Hapmap2;RS=rs128403499;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	27343700	27343799	.	+	.	Name=Plant_height;B73v2_pos=1:27397473;1allele=C/T;version=Hapmap2;RS=rs276213170;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	27347779	27347878	.	+	.	Name=Plant_height;B73v2_pos=1:27401552;1allele=T/C;version=Hapmap2;RS=rs827376410;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	27369299	27369398	.	+	.	Name=Leaf_width;B73v2_pos=1:27423072;1allele=T/C;version=Hapmap2;RS=rs128403858;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	27386069	27386168	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:27439907;1allele=T/A;version=Hapmap2;RS=rs821379603;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	27450994	27451093	.	+	.	Name=Plant_height;B73v2_pos=1:27503981;1allele=+/-;version=Hapmap2;RS=rs811651386;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	27570420	27570519	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:27626717;1allele=A/G;version=Hapmap1;RS=rs131226673;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	27574344	27574443	.	+	.	Name=Plant_height;B73v2_pos=1:27630641;1allele=G/A;version=Hapmap2;RS=rs815897032;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27578817	27578916	.	+	.	Name=Cob_diameter;B73v2_pos=1:27635114;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27580728	27580827	.	+	.	Name=Cob_diameter;B73v2_pos=1:27637025;1allele=T/C;version=Hapmap2;RS=rs827781289;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	27701285	27701384	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:27757575;1allele=C/T;version=Hapmap2;RS=rs839064298;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	27789857	27789956	.	+	.	Name=Leaf_length;B73v2_pos=1:27846162;1allele=A/G;version=Hapmap2;RS=rs832361713;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	27790008	27790107	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:27846313;1allele=T/C;version=Hapmap2;RS=rs821079861;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	27836339	27836439	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:27892369;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27858944	27859043	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:27914973;1allele=A/G;version=Hapmap2;RS=rs821217016;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	27861201	27861300	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:27917230;1allele=G/T;version=Hapmap1;RS=rs131227039;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	27895035	27895134	.	+	.	Name=Plant_height;B73v2_pos=1:27951149;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	27925654	27925753	.	+	.	Name=Fructose;B73v2_pos=1:27981769;1allele=G/A;version=Hapmap2;RS=rs128405045;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	28158396	28158495	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:28214088;1allele=T/C;version=Hapmap2;RS=rs833115986;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	28227359	28227458	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:28282802;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	28238249	28238348	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:28293598;1allele=A/G;version=Hapmap2;RS=rs128405844;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	28269631	28269730	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:28325311;1allele=C/T;version=Hapmap2;RS=rs814098796;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	28272390	28272489	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:28328070;1allele=C/T;version=Hapmap2;RS=rs276214335;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	28292877	28292976	.	+	.	Name=Plant_height;B73v2_pos=1:28348368;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	28323883	28323982	.	+	.	Name=Leaf_width;B73v2_pos=1:28378805;1allele=T/C;version=Hapmap2;RS=rs128406024;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	28363296	28363395	.	+	.	Name=Leaf_width;B73v2_pos=1:28418343;1allele=G/C;version=Hapmap2;RS=rs128406148;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	28396983	28397082	.	+	.	Name=Cob_diameter;B73v2_pos=1:28452029;1allele=G/C;version=Hapmap2;RS=rs815232878;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	28405633	28405732	.	+	.	Name=Tassel_length;B73v2_pos=1:28460680;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	28406885	28406984	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:28461932;1allele=C/G;version=Hapmap2;RS=rs816561199;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	28420129	28420228	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:28475175;1allele=T/C;version=Hapmap2;RS=rs820931993;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	28420375	28420474	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:28475421;1allele=T/C;version=Hapmap2;RS=rs848210589;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	28420823	28420922	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:28475869;1allele=A/T;version=Hapmap2;RS=rs837579459;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	28423217	28423316	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:28478393;1allele=G/A;version=Hapmap2;RS=rs1063471818;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	28480189	28480288	.	+	.	Name=Ear_row_number;B73v2_pos=1:278440618;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	28548714	28548813	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:28602687;1allele=T/G;version=Hapmap2;RS=rs811468808;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	28563197	28563296	.	+	.	Name=Plant_height;B73v2_pos=1:28617170;1allele=G/A;version=Hapmap2;RS=rs843905497;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	28587391	28587490	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:28641366;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	28613878	28613977	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:28681818;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	28617774	28617873	.	+	.	Name=Cob_diameter;B73v2_pos=1:28685714;1allele=T/C;version=Hapmap2;RS=rs834081667;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	28622790	28622889	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:28690730;1allele=G/A;version=Hapmap2;RS=rs832932966;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	28749249	28749348	.	+	.	Name=Fructose;B73v2_pos=1:28793360;1allele=+/-;version=Hapmap2;RS=rs846477164;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	28879041	28879140	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:28943477;1allele=A/G;version=Hapmap2;RS=rs819150550;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	28899288	28899387	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:28960950;1allele=A/G;version=Hapmap2;RS=rs830278083;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	28970183	28970282	.	+	.	Name=Plant_height;B73v2_pos=1:29030351;1allele=T/A;version=Hapmap2;RS=rs128406769;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	28973577	28973676	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29033745;1allele=T/A;version=Hapmap2;RS=rs824960016;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	29060543	29060642	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29090821;1allele=C/T;version=Hapmap2;RS=rs128406817;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29061601	29061700	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29091879;1allele=G/A;version=Hapmap2;RS=rs128406823;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	29081843	29081942	.	+	.	Name=Cob_diameter;B73v2_pos=1:29105174;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	29130169	29130268	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:29152481;1allele=T/C;version=Hapmap2;RS=rs832151909;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	29130169	29130268	.	+	.	Name=Plant_height;B73v2_pos=1:29152481;1allele=T/C;version=Hapmap2;RS=rs832151909;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	29130181	29130280	.	+	.	Name=Plant_height;B73v2_pos=1:29152493;1allele=C/T;version=Hapmap2;RS=rs840169741;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29130812	29130911	.	+	.	Name=Cob_diameter;B73v2_pos=1:29153124;1allele=T/C;version=Hapmap2;RS=rs724600225;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29134991	29135090	.	+	.	Name=Cob_diameter;B73v2_pos=1:29157303;1allele=A/T;version=Hapmap2;RS=rs131228320;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29135645	29135744	.	+	.	Name=Cob_diameter;B73v2_pos=1:29157957;1allele=G/A;version=Hapmap2;RS=rs838771903;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	29135669	29135768	.	+	.	Name=Cob_diameter;B73v2_pos=1:29157981;1allele=A/G;version=Hapmap2;RS=rs840198181;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	29136203	29136302	.	+	.	Name=Cob_diameter;B73v2_pos=1:29158515;1allele=C/A;version=Hapmap2;RS=rs844378885;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	29149611	29149710	.	+	.	Name=Cob_diameter;B73v2_pos=1:29171923;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	29150948	29151047	.	+	.	Name=Cob_diameter;B73v2_pos=1:29173260;1allele=G/A;version=Hapmap2;RS=rs1063233208;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	29152102	29152201	.	+	.	Name=Plant_height;B73v2_pos=1:29174414;1allele=G/A;version=Hapmap2;RS=rs806918208;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	29152102	29152201	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:29174414;1allele=G/A;version=Hapmap2;RS=rs806918208;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	29152128	29152227	.	+	.	Name=Cob_diameter;B73v2_pos=1:29174440;1allele=C/T;version=Hapmap2;RS=rs826342524;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	29172462	29172561	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29195915;1allele=G/T;version=Hapmap2;RS=rs815524637;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29209098	29209197	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29232165;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	29265417	29265516	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:29288591;1allele=C/T;version=Hapmap2;RS=rs822341474;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	29393714	29393813	.	+	.	Name=Cob_diameter;B73v2_pos=1:29399745;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	29803727	29803826	.	+	.	Name=Tassel_length;B73v2_pos=1:29777947;1allele=T/C;version=Hapmap2;RS=rs806631613;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29816206	29816305	.	+	.	Name=Plant_height;B73v2_pos=1:29790426;1allele=T/-;version=Hapmap1;RS=rs131229236;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29850142	29850241	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:29824217;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	29865404	29865503	.	+	.	Name=Tassel_length;B73v2_pos=1:29839482;1allele=A/C;version=Hapmap2;RS=rs815841627;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	29931401	29931500	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:29929429;1allele=A/G;version=Hapmap2;RS=rs828566946;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	29933661	29933760	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29931689;1allele=C/T;version=Hapmap2;RS=rs128407673;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	29934428	29934527	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:29932456;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	29934428	29934527	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:29932456;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	29945360	29945459	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29942401;1allele=G/A;version=Hapmap2;RS=rs1063036212;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	29945367	29945466	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29942408;1allele=T/A;version=Hapmap2;RS=rs815736187;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	29957742	29957841	.	+	.	Name=Leaf_width;B73v2_pos=1:29954785;1allele=G/C;version=Hapmap2;RS=rs810784080;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	29964602	29964701	.	+	.	Name=Leaf_length;B73v2_pos=1:29961645;1allele=G/T;version=Hapmap2;RS=rs727101243;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	29965354	29965453	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:29962397;1allele=A/C;version=Hapmap2;RS=rs846860988;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	30054645	30054744	.	+	.	Name=Tassel_length;B73v2_pos=1:30024597;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30060053	30060152	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:30030005;1allele=G/A;version=Hapmap2;RS=rs1061956385;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	30087828	30087927	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:30057832;1allele=A/G;version=Hapmap2;RS=rs808050048;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	30198921	30199020	.	+	.	Name=Tassel_length;B73v2_pos=1:30217360;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30199830	30199929	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:30216451;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30200325	30200424	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:30215956;1allele=/AGCGGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30206280	30206379	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:30222112;1allele=C/T;version=Hapmap2;RS=rs822709109;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	30216271	30216370	.	+	.	Name=Tassel_length;B73v2_pos=1:30232103;1allele=C/T;version=Hapmap2;RS=rs820196935;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	30221048	30221147	.	+	.	Name=Tassel_length;B73v2_pos=1:30236880;1allele=C/A;version=Hapmap2;RS=rs824462503;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	30221963	30222062	.	+	.	Name=Tassel_length;B73v2_pos=1:30237795;1allele=A/G;version=Hapmap2;RS=rs848265015;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	30222798	30222897	.	+	.	Name=Tassel_length;B73v2_pos=1:30238630;1allele=A/T;version=Hapmap2;RS=rs848069934;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	30246016	30246115	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:30261852;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30246294	30246393	.	+	.	Name=Ear_row_number;B73v2_pos=1:30262130;1allele=C/T;version=Hapmap2;RS=rs806359840;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	30263329	30263428	.	+	.	Name=Leaf_width;B73v2_pos=1:30279164;1allele=/TGGCAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30276373	30276472	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:30292208;1allele=C/T;version=Hapmap2;RS=rs843985471;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	30367158	30367257	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:30373214;1allele=G/T;version=Hapmap2;RS=rs839850120;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	30407139	30407238	.	+	.	Name=Tassel_length;B73v2_pos=1:30445695;1allele=T/A;version=Hapmap2;RS=rs829737310;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	30415072	30415171	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:30453631;1allele=G/A;version=Hapmap2;RS=rs810557929;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	30456138	30456237	.	+	.	Name=Tassel_length;B73v2_pos=1:30494789;1allele=G/A;version=Hapmap2;RS=rs803335198;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	30520595	30520694	.	+	.	Name=Tassel_length;B73v2_pos=1:30538607;1allele=C/G;version=Hapmap2;RS=rs804414762;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	30521436	30521535	.	+	.	Name=Tassel_length;B73v2_pos=1:30539448;1allele=G/C;version=Hapmap1;RS=rs131230066;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	30569953	30570052	.	+	.	Name=Tassel_length;B73v2_pos=1:30595272;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30573635	30573734	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:30598285;1allele=G/T;version=Hapmap2;RS=rs847606164;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	30632231	30632330	.	+	.	Name=Tassel_length;B73v2_pos=1:30655395;1allele=T/C;version=Hapmap2;RS=rs827482479;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	30642695	30642794	.	+	.	Name=Tassel_length;B73v2_pos=1:30617361;1allele=A/C;version=Hapmap2;RS=rs802491123;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	30702298	30702397	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:30716990;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	30904083	30904182	.	+	.	Name=Leaf_width;B73v2_pos=1:30907673;1allele=C/T;version=Hapmap2;RS=rs276216255;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	30935222	30935321	.	+	.	Name=Leaf_width;B73v2_pos=1:30939496;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	31053509	31053608	.	+	.	Name=Leaf_width;B73v2_pos=1:31064736;1allele=C/A;version=Hapmap2;RS=rs131230494;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	31059228	31059327	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:31070455;1allele=A/G;version=Hapmap2;RS=rs812326707;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	31064169	31064267	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:31075396;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	31205027	31205126	.	+	.	Name=Leaf_width;B73v2_pos=1:31205758;1allele=A/T;version=Hapmap2;RS=rs128409125;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	31437713	31437812	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:31426972;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	31742704	31742803	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:31745286;1allele=A/T;version=Hapmap2;RS=rs128409582;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	31774160	31774259	.	+	.	Name=Tassel_length;B73v2_pos=1:31777201;1allele=C/A;version=Hapmap2;RS=rs276217069;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	31774235	31774334	.	+	.	Name=Tassel_length;B73v2_pos=1:31777276;1allele=T/C;version=Hapmap2;RS=rs802391170;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	31786066	31786165	.	+	.	Name=Tassel_length;B73v2_pos=1:31789107;1allele=T/G;version=Hapmap2;RS=rs817665743;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	31799381	31799480	.	+	.	Name=Tassel_length;B73v2_pos=1:31834044;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	31802960	31803059	.	+	.	Name=Tassel_length;B73v2_pos=1:31830465;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	31841190	31841289	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:31859612;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	31903456	31903555	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:31938068;1allele=T/C;version=Hapmap2;RS=rs845475286;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	31974308	31974407	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32008929;1allele=A/G;version=Hapmap2;RS=rs131231518;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	31986479	31986578	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32021100;1allele=T/C;version=Hapmap2;RS=rs276217367;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	31986483	31986582	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32021104;1allele=A/G;version=Hapmap2;RS=rs276217368;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	31987593	31987692	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:32022214;1allele=T/A;version=Hapmap2;RS=rs128410050;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	31988708	31988807	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:32023329;1allele=G/T;version=Hapmap2;RS=rs276217385;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	32016322	32016421	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:32050943;1allele=TT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	32018346	32018445	.	+	.	Name=Plant_height;B73v2_pos=1:32052967;1allele=G/C;version=Hapmap2;RS=rs128410089;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	32018346	32018445	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32052967;1allele=G/C;version=Hapmap2;RS=rs128410089;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	32018489	32018588	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32053110;1allele=C/T;version=Hapmap1;RS=rs131231683;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	32022373	32022472	.	+	.	Name=Leaf_width;B73v2_pos=1:32056994;1allele=T/C;version=Hapmap2;RS=rs810183932;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	32054932	32055031	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:32089554;1allele=G/A;version=Hapmap2;RS=rs834039694;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	32123863	32123962	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:32156590;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	32127416	32127515	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32160143;1allele=C/G;version=Hapmap2;RS=rs131231977;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	32194339	32194438	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:32226913;1allele=C/T;version=Hapmap2;RS=rs805404164;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	32201940	32202039	.	+	.	Name=Plant_height;B73v2_pos=1:32234514;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	32219037	32219136	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:32251611;1allele=C/A;version=Hapmap2;RS=rs815610852;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	32285597	32285696	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32309289;1allele=A/G;version=Hapmap2;RS=rs812020935;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	32295202	32295301	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32317962;1allele=C/A;version=Hapmap2;RS=rs818195788;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	32550753	32550852	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:32578607;1allele=A/G;version=Hapmap1;RS=rs131232238;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	32585937	32586036	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:32601068;1allele=G/T;version=Hapmap2;RS=rs131232337;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	32625734	32625833	.	+	.	Name=Plant_height;B73v2_pos=1:32652087;1allele=C/G;version=Hapmap2;RS=rs840446762;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	32732333	32732432	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:32760587;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	32812248	32812347	.	+	.	Name=Leaf_width;B73v2_pos=1:32840610;1allele=T/G;version=Hapmap2;RS=rs823796395;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	32843765	32843864	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:32872125;1allele=A/G;version=Hapmap2;RS=rs802278294;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	32973074	32973173	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:32984563;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	33108888	33108987	.	+	.	Name=Leaf_width;B73v2_pos=1:33117787;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	33114797	33114896	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:33123696;1allele=T/A;version=Hapmap1;RS=rs131232966;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	33151719	33151818	.	+	.	Name=Leaf_width;B73v2_pos=1:33159198;1allele=T/A;version=Hapmap2;RS=rs821883916;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	33204962	33205061	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:33214249;1allele=C/T;version=Hapmap2;RS=rs809034470;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	33209095	33209194	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:33218382;1allele=C/G;version=Hapmap2;RS=rs847371198;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	33209100	33209199	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:33218387;1allele=T/A;version=Hapmap2;RS=rs821664580;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	33210491	33210590	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:33219778;1allele=C/A;version=Hapmap2;RS=rs844049926;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	33261216	33261315	.	+	.	Name=Ear_row_number;B73v2_pos=1:33270008;1allele=T/C;version=Hapmap2;RS=rs804281037;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	33442421	33442520	.	+	.	Name=Leaf_length;B73v2_pos=1:33451290;1allele=G/A;version=Hapmap2;RS=rs806880180;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	33659766	33659865	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:33674473;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	33803660	33803759	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:33829428;1allele=A/G;version=Hapmap2;RS=rs276219535;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	33813904	33814003	.	+	.	Name=Tassel_length;B73v2_pos=1:33839672;1allele=-/+;version=Hapmap2;RS=rs846890493;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	33813906	33814005	.	+	.	Name=Tassel_length;B73v2_pos=1:33839674;1allele=G/A;version=Hapmap2;RS=rs837135081;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	33903794	33903893	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:34021674;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	33973654	33973753	.	+	.	Name=Stalk_strength;B73v2_pos=1:33957641;1allele=+/-;version=Hapmap2;RS=rs827260793;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	34390791	34390890	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:34462296;1allele=C/T;version=Hapmap2;RS=rs128413480;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	34526874	34526973	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:34596696;1allele=C/G;version=Hapmap2;RS=rs131234647;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	34534084	34534183	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:34603906;1allele=C/T;version=Hapmap2;RS=rs276220937;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	34535972	34536071	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:34605794;1allele=C/T;version=Hapmap2;RS=rs830349248;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	34582024	34582123	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:34650131;1allele=G/A;version=Hapmap2;RS=rs1061326271;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	34663197	34663296	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:34732584;1allele=C/T;version=Hapmap2;RS=rs276221254;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	34703971	34704070	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:34770024;1allele=A/G;version=Hapmap2;RS=rs809989873;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	34740867	34740966	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:34808807;1allele=T/C;version=Hapmap2;RS=rs1064590130;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	34879088	34879187	.	+	.	Name=Ear_row_number;B73v2_pos=1:34946368;1allele=G/A;version=Hapmap2;RS=rs848653727;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	34883516	34883615	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:34950796;1allele=A/G;version=Hapmap2;RS=rs276221715;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	34923604	34923703	.	+	.	Name=Plant_height;B73v2_pos=1:34992099;1allele=G/A;version=Hapmap2;RS=rs822773414;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	34923604	34923703	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:34992099;1allele=G/A;version=Hapmap2;RS=rs822773414;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	34974809	34974908	.	+	.	Name=Cob_diameter;B73v2_pos=1:35045277;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35063869	35063968	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:35132556;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35148224	35148323	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:35216795;1allele=C/T;version=Hapmap2;RS=rs850111038;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	35517431	35517530	.	+	.	Name=Days_to_silk;B73v2_pos=1:35585666;1allele=G/A;version=Hapmap2;RS=rs824910523;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	35606906	35607005	.	+	.	Name=Leaf_width;B73v2_pos=1:35652180;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35676076	35676175	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:35723741;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35695618	35695717	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:35743420;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35695664	35695763	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:35743466;1allele=GGT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35699835	35699934	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:35747637;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35722261	35722360	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:35770817;1allele=C/A;version=Hapmap2;RS=rs131236354;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	35751980	35752079	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:35800536;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35786003	35786102	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:35834465;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35839287	35839386	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:35887751;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35921231	35921330	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:35969694;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35924816	35924915	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:35973279;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35926643	35926742	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:35975106;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	35936773	35936872	.	+	.	Name=Leaf_width;B73v2_pos=1:35985236;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	36134223	36134322	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:36202856;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	36147998	36148097	.	+	.	Name=Cob_diameter;B73v2_pos=1:36216631;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	36535002	36535101	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:36603442;1allele=C/T;version=Hapmap2;RS=rs832575390;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	36644192	36644291	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:36711758;1allele=G/A;version=Hapmap2;RS=rs816820501;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	36858364	36858463	.	+	.	Name=Days_to_silk;B73v2_pos=1:36913850;1allele=C/T;version=Hapmap2;RS=rs131237267;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	36863855	36863954	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:36919341;1allele=A/C;version=Hapmap2;RS=rs814772326;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	37081551	37081650	.	+	.	Name=Plant_height;B73v2_pos=1:37135859;1allele=C/G;version=Hapmap2;RS=rs810652715;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	37330989	37331088	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:37398639;1allele=C/T;version=Hapmap2;RS=rs817107244;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	37963216	37963315	.	+	.	Name=Cob_diameter;B73v2_pos=1:37990336;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	38013808	38013907	.	+	.	Name=Leaf_width;B73v2_pos=1:38040928;1allele=G/A;version=Hapmap2;RS=rs816172560;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38068505	38068604	.	+	.	Name=Leaf_width;B73v2_pos=1:38095625;1allele=C/G;version=Hapmap2;RS=rs128418209;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	38083868	38083967	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:38110988;1allele=G/A;version=Hapmap2;RS=rs815957809;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38090478	38090577	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38117601;1allele=C/A;version=Hapmap1;RS=rs131238145;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	38093019	38093118	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:38120142;1allele=T/A;version=Hapmap1;RS=rs807684995;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	38216751	38216850	.	+	.	Name=Leaf_width;B73v2_pos=1:38244999;1allele=G/A;version=Hapmap2;RS=rs820349637;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38222107	38222206	.	+	.	Name=Plant_height;B73v2_pos=1:38250355;1allele=A/G;version=Hapmap2;RS=rs128418742;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	38243477	38243576	.	+	.	Name=Plant_height;B73v2_pos=1:38292572;1allele=T/C;version=Hapmap1;RS=rs131238381;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	38278651	38278750	.	+	.	Name=Malate;B73v2_pos=1:38327599;1allele=G/T;version=Hapmap2;RS=rs276227135;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	38282015	38282114	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:38330963;1allele=C/T;version=Hapmap2;RS=rs276227150;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	38314211	38314310	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38446684;1allele=T/C;version=Hapmap2;RS=rs823743342;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	38397124	38397223	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38386281;1allele=G/A;version=Hapmap2;RS=rs813246902;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38462154	38462253	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:38512334;1allele=G/A;version=Hapmap2;RS=rs820644061;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38462175	38462274	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:38512355;1allele=T/C;version=Hapmap2;RS=rs809596321;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	38470267	38470366	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:38520453;1allele=G/A;version=Hapmap2;RS=rs825648135;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38473014	38473113	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38523200;1allele=C/T;version=Hapmap2;RS=rs830550356;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	38473408	38473507	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38523595;1allele=C/T;version=Hapmap2;RS=rs846398271;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	38473580	38473679	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38523767;1allele=G/A;version=Hapmap2;RS=rs809511954;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38544251	38544350	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:38608036;1allele=A/G;version=Hapmap2;RS=rs1062162830;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	38683156	38683255	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:38740551;1allele=G/T;version=Hapmap2;RS=rs131238790;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	38729898	38729997	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:38784452;1allele=T/G;version=Hapmap2;RS=rs128419323;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	38790558	38790657	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:38846469;1allele=G/A;version=Hapmap2;RS=rs825438137;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	38792152	38792251	.	+	.	Name=Cob_diameter;B73v2_pos=1:38848063;1allele=T/C;version=Hapmap2;RS=rs836946862;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	38795054	38795153	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38850965;1allele=G/T;version=Hapmap2;RS=rs131238903;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	38795086	38795185	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:38850997;1allele=T/A;version=Hapmap2;RS=rs822635489;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	38795086	38795185	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:38850997;1allele=T/A;version=Hapmap2;RS=rs822635489;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	38808431	38808530	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:38864343;1allele=A/G;version=Hapmap2;RS=rs276228143;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	38812135	38812234	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:38868047;1allele=T/A;version=Hapmap1;RS=rs131239032;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	38986708	38986807	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:39058988;1allele=C/T;version=Hapmap2;RS=rs276228410;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	38995476	38995575	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:39067756;1allele=T/C;version=Hapmap2;RS=rs128419831;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	39029594	39029693	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:39101874;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	39039348	39039447	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:39111628;1allele=G/A;version=Hapmap2;RS=rs128419984;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	39175840	39175939	.	+	.	Name=Malate;B73v2_pos=1:39254187;1allele=/CGCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	39281165	39281264	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:39359448;1allele=A/G;version=Hapmap2;RS=rs276228791;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	39317903	39318002	.	+	.	Name=Ear_row_number;B73v2_pos=1:39395158;1allele=C/T;version=Hapmap2;RS=rs846575462;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	39441060	39441159	.	+	.	Name=Ear_row_number;B73v2_pos=1:39512684;1allele=A/G;version=Hapmap2;RS=rs838284499;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	39483278	39483377	.	+	.	Name=Ear_row_number;B73v2_pos=1:39554839;1allele=C/T;version=Hapmap2;RS=rs276229091;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	39686847	39686946	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:39749182;1allele=G/A;version=Hapmap2;RS=rs131239910;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	39687688	39687787	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:39750023;1allele=C/T;version=Hapmap2;RS=rs802561324;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	39688070	39688169	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:39750405;1allele=C/A;version=Hapmap2;RS=rs832835968;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	39693564	39693663	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:39755899;1allele=C/T;version=Hapmap2;RS=rs806851406;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	39858045	39858144	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:39925106;1allele=G/A;version=Hapmap2;RS=rs812404317;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	39863397	39863496	.	+	.	Name=Days_to_silk;B73v2_pos=1:39930458;1allele=T/C;version=Hapmap2;RS=rs131240232;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	39931393	39931492	.	+	.	Name=Malate;B73v2_pos=1:39988791;1allele=A/G;version=Hapmap2;RS=rs131240300;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	40182391	40182490	.	+	.	Name=Malate;B73v2_pos=1:40232327;1allele=G/T;version=Hapmap2;RS=rs847782317;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	40227245	40227344	.	+	.	Name=Malate;B73v2_pos=1:40275655;1allele=C/T;version=Hapmap2;RS=rs128422365;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	40287720	40287819	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:40349314;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	40342690	40342789	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:40399345;1allele=/CCAGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	40359955	40360054	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:40416611;1allele=G/A;version=Hapmap2;RS=rs128422794;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	40361654	40361753	.	+	.	Name=Malate;B73v2_pos=1:40418310;1allele=C/T;version=Hapmap2;RS=rs128422779;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	40362180	40362279	.	+	.	Name=Malate;B73v2_pos=1:40418836;1allele=T/C;version=Hapmap2;RS=rs128422769;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	40362893	40362992	.	+	.	Name=Malate;B73v2_pos=1:40419549;1allele=-/+;version=Hapmap2;RS=rs840273082;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	40365010	40365109	.	+	.	Name=Ear_row_number;B73v2_pos=1:40421666;1allele=A/C;version=Hapmap2;RS=rs128422752;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	40379595	40379694	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:40436251;1allele=T/C;version=Hapmap2;RS=rs725325360;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	40403068	40403167	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:40444470;1allele=C/A;version=Hapmap2;RS=rs276231473;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	40693016	40693115	.	+	.	Name=Starch;B73v2_pos=1:40754473;1allele=C/T;version=Hapmap2;RS=rs128423231;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	40851486	40851585	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:40917393;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	40927827	40927926	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:40993749;1allele=T/G;version=Hapmap2;RS=rs844322329;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	41165614	41165713	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:41238952;1allele=T/C;version=Hapmap1;RS=rs849035570;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	41167132	41167231	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:41240470;1allele=C/T;version=Hapmap2;RS=rs844066699;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	41300632	41300731	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:41377875;1allele=/ATTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	41300669	41300768	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:41377912;1allele=/TTTTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	41300669	41300768	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:41377912;1allele=/TTTTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	41301174	41301273	.	+	.	Name=Malate;B73v2_pos=1:41378417;1allele=G/A;version=Hapmap2;RS=rs822240801;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	41302658	41302757	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:41379901;1allele=C/A;version=Hapmap2;RS=rs810466288;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	41371463	41371562	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:41431823;1allele=C/A;version=Hapmap2;RS=rs833429018;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	41371463	41371562	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:41431823;1allele=C/A;version=Hapmap2;RS=rs833429018;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	41513572	41513671	.	+	.	Name=Days_to_silk;B73v2_pos=1:41577055;1allele=T/C;version=Hapmap2;RS=rs833529186;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	41651447	41651546	.	+	.	Name=Malate;B73v2_pos=1:41783934;1allele=A/G;version=Hapmap2;RS=rs847474026;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	41748785	41748884	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:41898250;1allele=G/A;version=Hapmap2;RS=rs826058871;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	41798688	41798787	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:41950183;1allele=G/A;version=Hapmap2;RS=rs727052358;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	41801068	41801167	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:41952563;1allele=C/G;version=Hapmap2;RS=rs727099194;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	42007736	42007835	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:42160978;1allele=A/G;version=Hapmap2;RS=rs726145815;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	42009739	42009838	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:42162981;1allele=C/T;version=Hapmap2;RS=rs827920491;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42325072	42325171	.	+	.	Name=Leaf_length;B73v2_pos=1:42479369;1allele=T/A;version=Hapmap2;RS=rs128425462;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	42359817	42359916	.	+	.	Name=Days_to_silk;B73v2_pos=1:42515124;1allele=T/C;version=Hapmap1;RS=rs131242310;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	42602291	42602390	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:42748759;1allele=G/A;version=Hapmap2;RS=rs809782730;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	42602291	42602390	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:42748759;1allele=G/A;version=Hapmap2;RS=rs809782730;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	42716112	42716211	.	+	.	Name=Days_to_silk;B73v2_pos=1:42855150;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	42716131	42716230	.	+	.	Name=Days_to_silk;B73v2_pos=1:42855169;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	42716296	42716395	.	+	.	Name=Days_to_silk;B73v2_pos=1:42855334;1allele=G/T;version=Hapmap2;RS=rs276234710;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	42716299	42716398	.	+	.	Name=Days_to_silk;B73v2_pos=1:42855337;1allele=G/A;version=Hapmap2;RS=rs276234711;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	42716729	42716828	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42855767;1allele=A/T;version=Hapmap2;RS=rs276234715;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	42716968	42717067	.	+	.	Name=Leaf_width;B73v2_pos=1:42856006;1allele=C/T;version=Hapmap2;RS=rs843480480;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42717121	42717220	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:42856159;1allele=A/G;version=Hapmap2;RS=rs805254305;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	42727956	42728055	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42865052;1allele=T/C;version=Hapmap2;RS=rs128425791;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	42727956	42728055	.	+	.	Name=Days_to_silk;B73v2_pos=1:42865052;1allele=T/C;version=Hapmap2;RS=rs128425791;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	42727968	42728067	.	+	.	Name=Days_to_silk;B73v2_pos=1:42865064;1allele=C/T;version=Hapmap2;RS=rs276234722;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42727994	42728093	.	+	.	Name=Days_to_silk;B73v2_pos=1:42865090;1allele=T/C;version=Hapmap2;RS=rs276234723;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	42728730	42728829	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42865826;1allele=C/T;version=Hapmap2;RS=rs833756852;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42728808	42728907	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42865904;1allele=C/T;version=Hapmap2;RS=rs823082814;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42729193	42729292	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42866289;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	42730012	42730111	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:42867108;1allele=A/G;version=Hapmap1;RS=rs131242653;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	42730044	42730143	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:42867140;1allele=C/T;version=Hapmap2;RS=rs131242656;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42730044	42730143	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42867140;1allele=C/T;version=Hapmap2;RS=rs131242656;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42731456	42731555	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42868552;1allele=A/G;version=Hapmap2;RS=rs276234748;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	42732954	42733053	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42870050;1allele=G/A;version=Hapmap2;RS=rs841474482;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	42734022	42734121	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:42871118;1allele=T/C;version=Hapmap2;RS=rs276234793;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	42910649	42910748	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:43059811;1allele=C/T;version=Hapmap1;RS=rs131242794;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	42928948	42929047	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:43078111;1allele=T/C;version=Hapmap2;RS=rs814430119;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	42954981	42955080	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:43108794;1allele=A/G;version=Hapmap2;RS=rs128426134;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	42957255	42957354	.	+	.	Name=Days_to_silk;B73v2_pos=1:43111068;1allele=C/G;version=Hapmap2;RS=rs128426117;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	42957255	42957354	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:43111068;1allele=C/G;version=Hapmap2;RS=rs128426117;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	42957370	42957469	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:43111183;1allele=A/G;version=Hapmap2;RS=rs128426116;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	42957382	42957481	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:43111195;1allele=T/A;version=Hapmap2;RS=rs128426115;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	42959175	42959274	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:43112988;1allele=C/A;version=Hapmap2;RS=rs1060641544;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	42964214	42964313	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:43118027;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	42983360	42983459	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:43137171;1allele=G/C;version=Hapmap2;RS=rs128425992;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	43270486	43270585	.	+	.	Name=Days_to_silk;B73v2_pos=1:43421780;1allele=A/G;version=Hapmap2;RS=rs276235966;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	43368471	43368570	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:43522449;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	43517317	43517416	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:43670988;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	43602922	43603021	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:43809734;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	43639059	43639158	.	+	.	Name=Fructose;B73v2_pos=1:43766879;1allele=T/G;version=Hapmap2;RS=rs131243565;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	43640294	43640393	.	+	.	Name=Fructose;B73v2_pos=1:43768114;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	43640328	43640427	.	+	.	Name=Fructose;B73v2_pos=1:43768148;1allele=G/C;version=Hapmap2;RS=rs810669533;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	43808629	43808728	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:43987482;1allele=T/C;version=Hapmap2;RS=rs832213560;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	44004191	44004290	.	+	.	Name=Leaf_length;B73v2_pos=1:44192028;1allele=A/G;version=Hapmap2;RS=rs276237064;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44138132	44138231	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:44328549;1allele=A/G;version=Hapmap2;RS=rs128427520;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44138132	44138231	.	+	.	Name=Days_to_silk;B73v2_pos=1:44328549;1allele=A/G;version=Hapmap2;RS=rs128427520;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44138881	44138980	.	+	.	Name=Fructose;B73v2_pos=1:44329298;1allele=A/G;version=Hapmap2;RS=rs818303332;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44183764	44183863	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:44373349;1allele=A/G;version=Hapmap2;RS=rs810124917;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44194159	44194258	.	+	.	Name=Days_to_silk;B73v2_pos=1:44383744;1allele=T/A;version=Hapmap2;RS=rs832189891;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	44228491	44228590	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:44418078;1allele=G/A;version=Hapmap2;RS=rs843441069;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	44352673	44352771	.	+	.	Name=Leaf_width;B73v2_pos=1:44539247;1allele=A/G;version=Hapmap2;RS=rs840695298;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44465249	44465348	.	+	.	Name=Fructose;B73v2_pos=1:44650286;1allele=A/G;version=Hapmap2;RS=rs1063015246;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44595193	44595292	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:44806367;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	44640163	44640262	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:44841309;1allele=A/G;version=Hapmap2;RS=rs725623102;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44738072	44738171	.	+	.	Name=Starch;B73v2_pos=1:44952144;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	44772947	44773046	.	+	.	Name=Malate;B73v2_pos=1:44988165;1allele=A/G;version=Hapmap2;RS=rs128429201;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	44907183	44907282	.	+	.	Name=Malate;B73v2_pos=1:45112765;1allele=T/C;version=Hapmap2;RS=rs846717985;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	44915218	44915317	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:45120796;1allele=G/C;version=Hapmap2;RS=rs813387961;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	44980853	44980952	.	+	.	Name=Days_to_silk;B73v2_pos=1:45206069;1allele=T/C;version=Hapmap2;RS=rs276238841;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	44980932	44981031	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:45206148;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	44981328	44981427	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:45206544;1allele=A/T;version=Hapmap2;RS=rs276238849;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	44982252	44982351	.	+	.	Name=Days_to_silk;B73v2_pos=1:45207468;1allele=C/T;version=Hapmap2;RS=rs276238870;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	44996762	44996861	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:45221978;1allele=C/A;version=Hapmap2;RS=rs276238970;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	45069179	45069278	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:45276646;1allele=T/C;version=Hapmap2;RS=rs818843385;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45069179	45069278	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:45276646;1allele=T/C;version=Hapmap2;RS=rs818843385;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45069179	45069278	.	+	.	Name=Days_to_silk;B73v2_pos=1:45276646;1allele=T/C;version=Hapmap2;RS=rs818843385;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45070418	45070517	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:45277885;1allele=A/G;version=Hapmap2;RS=rs276239044;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45070449	45070548	.	+	.	Name=Days_to_silk;B73v2_pos=1:45277916;1allele=G/C;version=Hapmap2;RS=rs276239045;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	45070449	45070548	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:45277916;1allele=G/C;version=Hapmap2;RS=rs276239045;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	45071561	45071660	.	+	.	Name=Days_to_silk;B73v2_pos=1:45279028;1allele=T/A;version=Hapmap2;RS=rs812984837;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	45072506	45072605	.	+	.	Name=Days_to_silk;B73v2_pos=1:45279973;1allele=C/T;version=Hapmap2;RS=rs276239058;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45160579	45160678	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:45366181;1allele=T/C;version=Hapmap1;RS=rs131244938;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45160579	45160678	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:45366181;1allele=T/C;version=Hapmap1;RS=rs131244938;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45161623	45161722	.	+	.	Name=Days_to_silk;B73v2_pos=1:45367225;1allele=T/G;version=Hapmap2;RS=rs276239108;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	45162391	45162490	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45367993;1allele=G/T;version=Hapmap2;RS=rs825452195;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	45200203	45200302	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45405810;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45227985	45228084	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:45441981;1allele=T/G;version=Hapmap2;RS=rs131245178;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	45228448	45228547	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:45442444;1allele=T/C;version=Hapmap2;RS=rs808839889;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45228464	45228563	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:45442460;1allele=T/C;version=Hapmap2;RS=rs1062968430;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	45228649	45228748	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:45442645;1allele=C/T;version=Hapmap2;RS=rs846989230;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	45229805	45229904	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45443801;1allele=G/A;version=Hapmap2;RS=rs827855108;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45257894	45257993	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45451463;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45268903	45269002	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45470234;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45316318	45316417	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:45517416;1allele=A/G;version=Hapmap2;RS=rs1064344863;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45321301	45321400	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:45522400;1allele=G/A;version=Hapmap2;RS=rs840431896;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45376528	45376627	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45570474;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45495970	45496069	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45678406;1allele=G/C;version=Hapmap2;RS=rs844574367;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	45561500	45561599	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:45736041;1allele=C/T;version=Hapmap2;RS=rs815185185;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	45603162	45603261	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45778081;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45605567	45605666	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45780485;1allele=G/C;version=Hapmap2;RS=rs822591793;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	45608202	45608301	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45783120;1allele=G/A;version=Hapmap2;RS=rs276239765;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45612694	45612793	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45787612;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45706265	45706364	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45871894;1allele=A/T;version=Hapmap2;RS=rs835817665;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	45709342	45709441	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:45874971;1allele=G/A;version=Hapmap2;RS=rs276239993;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45742233	45742332	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45905296;1allele=T/C;version=Hapmap2;RS=rs276240093;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	45753578	45753677	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45916241;1allele=A/G;version=Hapmap2;RS=rs276240096;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45760113	45760212	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45922776;1allele=G/A;version=Hapmap1;RS=rs726987798;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45760485	45760584	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45923148;1allele=G/A;version=Hapmap1;RS=rs128430728;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	45760783	45760882	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45923446;1allele=A/G;version=Hapmap2;RS=rs131245639;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45761433	45761532	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45924096;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45766107	45766206	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45928770;1allele=A/G;version=Hapmap2;RS=rs818919116;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45771909	45772008	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:45934572;1allele=T/A;version=Hapmap2;RS=rs806957668;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	45775101	45775200	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45937760;1allele=C/G;version=Hapmap1;RS=rs131245748;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	45777221	45777320	.	+	.	Name=Leaf_width;B73v2_pos=1:45939880;1allele=G/A;version=Hapmap2;RS=rs131245801;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45788106	45788205	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45950765;1allele=C/T;version=Hapmap2;RS=rs832179907;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45824290	45824389	.	+	.	Name=Days_to_silk;B73v2_pos=1:45987186;1allele=A/G;version=Hapmap2;RS=rs809360126;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	45863367	45863466	.	+	.	Name=Days_to_silk;B73v2_pos=1:46008290;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	45912434	45912533	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:46072047;1allele=A/G;version=Hapmap2;RS=rs1063326705;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45915560	45915659	.	+	.	Name=Starch;B73v2_pos=1:46075169;1allele=T/C;version=Hapmap2;RS=rs276240452;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	45957371	45957470	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:46116811;1allele=G/A;version=Hapmap2;RS=rs845699759;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	45959636	45959735	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:46119082;1allele=G/A;version=Hapmap2;RS=rs824101126;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	45968892	45968991	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:46128338;1allele=C/T;version=Hapmap2;RS=rs276240590;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	46022451	46022550	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:46183689;1allele=C/A;version=Hapmap2;RS=rs808112659;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	46372175	46372274	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:46539406;1allele=A/G;version=Hapmap2;RS=rs276241117;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	46380684	46380783	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:46547915;1allele=T/C;version=Hapmap2;RS=rs836783240;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	46413400	46413499	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:46580621;1allele=C/G;version=Hapmap2;RS=rs276241284;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	46419535	46419634	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:46586756;1allele=G/A;version=Hapmap2;RS=rs726525302;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	46454277	46454376	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:46621528;1allele=C/A;version=Hapmap2;RS=rs128431642;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	46460022	46460121	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:46627273;1allele=C/T;version=Hapmap2;RS=rs846312368;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	46479183	46479282	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:46646435;1allele=T/C;version=Hapmap2;RS=rs816975466;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	46484234	46484333	.	+	.	Name=Tassel_length;B73v2_pos=1:46651486;1allele=A/C;version=Hapmap2;RS=rs840318084;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	46490161	46490260	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:46657413;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	46517123	46517222	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:46684376;1allele=C/T;version=Hapmap2;RS=rs839284788;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	46519079	46519178	.	+	.	Name=Tassel_length;B73v2_pos=1:46686332;1allele=A/G;version=Hapmap2;RS=rs824074525;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	46519079	46519178	.	+	.	Name=Leaf_length;B73v2_pos=1:46686332;1allele=A/G;version=Hapmap2;RS=rs824074525;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	46520053	46520152	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:46687306;1allele=A/T;version=Hapmap1;RS=rs131246674;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	46627396	46627495	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:46814824;1allele=C/T;version=Hapmap2;RS=rs828307527;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	46674096	46674195	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:46840586;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	46675908	46676007	.	+	.	Name=Tassel_length;B73v2_pos=1:46842398;1allele=C/A;version=Hapmap1;RS=rs131246790;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	46681203	46681302	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:46847693;1allele=G/A;version=Hapmap2;RS=rs276241711;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	46682327	46682426	.	+	.	Name=Leaf_width;B73v2_pos=1:46848817;1allele=A/G;version=Hapmap2;RS=rs842758157;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	46698060	46698159	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:46864550;1allele=A/T;version=Hapmap2;RS=rs276241850;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	46942722	46942821	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:47130298;1allele=T/C;version=Hapmap2;RS=rs822451987;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	46964278	46964377	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:47151935;1allele=T/C;version=Hapmap2;RS=rs813663572;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	46964278	46964377	.	+	.	Name=Tassel_length;B73v2_pos=1:47151935;1allele=T/C;version=Hapmap2;RS=rs813663572;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	46990374	46990473	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:47178031;1allele=G/C;version=Hapmap2;RS=rs802387202;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	47020826	47020925	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:47208484;1allele=A/G;version=Hapmap2;RS=rs849436533;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	47027269	47027368	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:47214930;1allele=C/T;version=Hapmap2;RS=rs839831914;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	47137207	47137306	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:47324391;1allele=C/A;version=Hapmap2;RS=rs276242493;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	47225890	47225989	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:47407271;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	47226339	47226438	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:47406822;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	47226339	47226438	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:47406822;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	47227732	47227831	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:47405429;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	47286799	47286898	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:47468396;1allele=A/G;version=Hapmap2;RS=rs128433039;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	47424960	47425059	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:47597588;1allele=/TCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	47425247	47425346	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:47597875;1allele=T/C;version=Hapmap2;RS=rs809716131;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	47426185	47426284	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:47598813;1allele=G/C;version=Hapmap1;RS=rs131247538;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	47595606	47595705	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:47769784;1allele=C/A;version=Hapmap2;RS=rs827849777;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	47601171	47601270	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:47775349;1allele=C/G;version=Hapmap2;RS=rs276242912;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	47601753	47601852	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:47775931;1allele=G/C;version=Hapmap2;RS=rs1062271083;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	47635130	47635229	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:47805912;1allele=T/C;version=Hapmap2;RS=rs1061041237;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	47786489	47786588	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:47905780;1allele=A/C;version=Hapmap2;RS=rs1064269122;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	47890385	47890468	.	+	.	Name=Tassel_length;B73v2_pos=1:48058858;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	48338691	48338790	.	+	.	Name=Tassel_length;B73v2_pos=1:48468644;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	48349922	48350021	.	+	.	Name=Tassel_length;B73v2_pos=1:48480058;1allele=T/C;version=Hapmap2;RS=rs807530476;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	48391890	48391989	.	+	.	Name=Starch;B73v2_pos=1:48552592;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	48480092	48480191	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:48641286;1allele=T/C;version=Hapmap1;RS=rs131248306;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	48481162	48481261	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:48642356;1allele=G/C;version=Hapmap1;RS=rs808472048;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	48481244	48481343	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:48642438;1allele=/TCGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	48495642	48495741	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:48656836;1allele=G/T;version=Hapmap2;RS=rs813651313;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	48496057	48496156	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:48657251;1allele=C/A;version=Hapmap2;RS=rs724742847;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	48496662	48496761	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:48657856;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	48519641	48519740	.	+	.	Name=Tassel_length;B73v2_pos=1:48680837;1allele=C/T;version=Hapmap2;RS=rs817276253;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	48557584	48557683	.	+	.	Name=Tassel_length;B73v2_pos=1:48710596;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	48608544	48608643	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:48759746;1allele=C/T;version=Hapmap2;RS=rs826742274;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	48627221	48627320	.	+	.	Name=Starch;B73v2_pos=1:48778428;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	48977497	48977596	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:49137086;1allele=A/G;version=Hapmap2;RS=rs725808120;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	49007199	49007298	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:49166736;1allele=A/C;version=Hapmap2;RS=rs725820753;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	49049132	49049231	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:49208670;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	49240168	49240267	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:49393512;1allele=T/A;version=Hapmap2;RS=rs131249072;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	49352004	49352103	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:49509057;1allele=T/C;version=Hapmap2;RS=rs276244825;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	49466908	49467007	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:49656097;1allele=G/A;version=Hapmap2;RS=rs818391898;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	49553121	49553220	.	+	.	Name=Starch;B73v2_pos=1:49698491;1allele=T/C;version=Hapmap2;RS=rs826811854;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	49808258	49808357	.	+	.	Name=Tassel_length;B73v2_pos=1:49948258;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50119277	50119376	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:50233732;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50161897	50161996	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:50300274;1allele=A/G;version=Hapmap2;RS=rs842722626;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	50231819	50231918	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:50370488;1allele=A/G;version=Hapmap1;RS=rs276245711;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	50300637	50300736	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:50439310;1allele=A/G;version=Hapmap1;RS=rs131249631;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	50322207	50322306	.	+	.	Name=Starch;B73v2_pos=1:50470160;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50325203	50325302	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:50467164;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50325203	50325302	.	+	.	Name=Tassel_length;B73v2_pos=1:50467164;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50472400	50472499	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:50604958;1allele=T/C;version=Hapmap2;RS=rs128437288;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	50480965	50481064	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:50613533;1allele=A/C;version=Hapmap2;RS=rs128437296;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	50492702	50492801	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:50625271;1allele=A/C;version=Hapmap2;RS=rs276245921;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	50506497	50506596	.	+	.	Name=Starch;B73v2_pos=1:50639066;1allele=C/T;version=Hapmap2;RS=rs131249684;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	50594818	50594917	.	+	.	Name=Starch;B73v2_pos=1:50688405;1allele=C/T;version=Hapmap2;RS=rs814125674;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	50617286	50617385	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:50710873;1allele=A/G;version=Hapmap2;RS=rs128437708;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	50620132	50620231	.	+	.	Name=Tassel_length;B73v2_pos=1:50713719;1allele=G/A;version=Hapmap2;RS=rs128437729;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	50633102	50633201	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:50726689;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50635279	50635378	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:50728866;1allele=T/C;version=Hapmap2;RS=rs834668414;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	50668889	50668988	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:50762379;1allele=T/C;version=Hapmap2;RS=rs276246117;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	50732246	50732345	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:50827890;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50813818	50813917	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:50857963;1allele=G/A;version=Hapmap2;RS=rs845831739;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	50817728	50817827	.	+	.	Name=Leaf_width;B73v2_pos=1:50861873;1allele=G/C;version=Hapmap2;RS=rs726705691;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	50820155	50820254	.	+	.	Name=Plant_height;B73v2_pos=1:50864300;1allele=A/G;version=Hapmap2;RS=rs131249954;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	50856173	50856272	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:50948549;1allele=G/A;version=Hapmap2;RS=rs837265385;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	50858181	50858280	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:50952716;1allele=G/C;version=Hapmap2;RS=rs128438019;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	50861691	50861790	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:50956259;1allele=C/T;version=Hapmap2;RS=rs809627705;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	50864355	50864454	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:50958923;1allele=T/G;version=Hapmap1;RS=rs131250040;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	50865376	50865475	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:50959944;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	50866345	50866444	.	+	.	Name=Starch;B73v2_pos=1:50960913;1allele=C/A;version=Hapmap2;RS=rs131250076;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	50866760	50866859	.	+	.	Name=Starch;B73v2_pos=1:50961328;1allele=G/A;version=Hapmap2;RS=rs131250087;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	50901994	50902093	.	+	.	Name=Starch;B73v2_pos=1:50996112;1allele=C/G;version=Hapmap2;RS=rs819638735;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	50902116	50902215	.	+	.	Name=Starch;B73v2_pos=1:50996234;1allele=G/A;version=Hapmap2;RS=rs808089956;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	50923122	50923221	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:51016426;1allele=A/C;version=Hapmap2;RS=rs128438150;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	50926773	50926872	.	+	.	Name=Height_above_ear;B73v2_pos=1:51020077;1allele=T/A;version=Hapmap2;RS=rs810078604;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	50928453	50928552	.	+	.	Name=Starch;B73v2_pos=1:51021757;1allele=T/C;version=Hapmap2;RS=rs128438189;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	50945520	50945619	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51038828;1allele=C/T;version=Hapmap2;RS=rs128438199;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	51090277	51090376	.	+	.	Name=Ear_row_number;B73v2_pos=1:51197893;1allele=G/A;version=Hapmap2;RS=rs276246677;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	51095778	51095877	.	+	.	Name=Tassel_length;B73v2_pos=1:51202530;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	51112000	51112099	.	+	.	Name=Ear_row_number;B73v2_pos=1:51218748;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	51164181	51164280	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51270852;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	51192064	51192163	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51298401;1allele=C/G;version=Hapmap2;RS=rs128438531;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	51192143	51192242	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51298480;1allele=G/A;version=Hapmap2;RS=rs276246785;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51194230	51194329	.	+	.	Name=Leaf_length;B73v2_pos=1:51300567;1allele=A/G;version=Hapmap2;RS=rs276246798;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	51215525	51215624	.	+	.	Name=Starch;B73v2_pos=1:51321862;1allele=A/C;version=Hapmap2;RS=rs128438608;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	51218751	51218850	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:51325088;1allele=G/A;version=Hapmap2;RS=rs128438626;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51287178	51287277	.	+	.	Name=Starch;B73v2_pos=1:51387283;1allele=A/C;version=Hapmap2;RS=rs836168771;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	51287762	51287861	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51387867;1allele=T/C;version=Hapmap2;RS=rs825541753;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	51291039	51291138	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51391144;1allele=T/A;version=Hapmap1;RS=rs128438767;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	51308194	51308293	.	+	.	Name=Starch;B73v2_pos=1:51407328;1allele=A/G;version=Hapmap2;RS=rs817179318;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51308507	51308606	.	+	.	Name=Starch;B73v2_pos=1:51407641;1allele=T/G;version=Hapmap2;RS=rs846685381;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	51313725	51313824	.	+	.	Name=Starch;B73v2_pos=1:51412859;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	51313968	51314067	.	+	.	Name=Starch;B73v2_pos=1:51413102;1allele=T/A;version=Hapmap2;RS=rs276247024;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	51362592	51362691	.	+	.	Name=Leaf_length;B73v2_pos=1:51460246;1allele=C/T;version=Hapmap1;RS=rs131250801;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	51365665	51365764	.	+	.	Name=Ear_row_number;B73v2_pos=1:51464344;1allele=G/C;version=Hapmap2;RS=rs823929795;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	51370738	51370837	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:51469417;1allele=G/A;version=Hapmap2;RS=rs1063774886;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51384643	51384742	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51483322;1allele=A/G;version=Hapmap2;RS=rs821848147;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51419063	51419162	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:51516936;1allele=T/C;version=Hapmap2;RS=rs1062767111;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	51434492	51434591	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:51532366;1allele=A/G;version=Hapmap2;RS=rs817399756;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51472692	51472791	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:51571165;1allele=C/T;version=Hapmap2;RS=rs276247377;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	51635151	51635250	.	+	.	Name=Leaf_width;B73v2_pos=1:51765203;1allele=G/A;version=Hapmap2;RS=rs844791071;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	51921875	51921974	.	+	.	Name=Leaf_length;B73v2_pos=1:52048750;1allele=T/A;version=Hapmap2;RS=rs825975154;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	51937832	51937931	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:52064707;1allele=C/T;version=Hapmap2;RS=rs821912303;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	51954111	51954210	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:52071552;1allele=A/G;version=Hapmap2;RS=rs276247843;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51958383	51958482	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:52075825;1allele=G/A;version=Hapmap2;RS=rs131251181;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	51967017	51967116	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:52084459;1allele=C/T;version=Hapmap2;RS=rs128439624;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	51968272	51968371	.	+	.	Name=Leaf_length;B73v2_pos=1:52085714;1allele=C/T;version=Hapmap2;RS=rs276247910;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	51968674	51968773	.	+	.	Name=Tassel_length;B73v2_pos=1:52086116;1allele=A/G;version=Hapmap2;RS=rs128439644;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	51969681	51969780	.	+	.	Name=Tassel_length;B73v2_pos=1:52087122;1allele=G/C;version=Hapmap2;RS=rs128439657;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	51969681	51969780	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:52087122;1allele=G/C;version=Hapmap2;RS=rs128439657;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	51969699	51969798	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:52087140;1allele=C/A;version=Hapmap2;RS=rs1064278317;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	51974539	51974638	.	+	.	Name=Tassel_length;B73v2_pos=1:52091521;1allele=T/G;version=Hapmap1;RS=rs131251291;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	51982454	51982553	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:52099436;1allele=T/G;version=Hapmap2;RS=rs827218865;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	52045453	52045552	.	+	.	Name=Leaf_length;B73v2_pos=1:52154733;1allele=C/G;version=Hapmap2;RS=rs830732495;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	52047261	52047360	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:52156541;1allele=A/G;version=Hapmap2;RS=rs821229980;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	52047964	52048063	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:52157244;1allele=C/T;version=Hapmap2;RS=rs1064530430;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	52049380	52049479	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:52158660;1allele=A/G;version=Hapmap2;RS=rs842998033;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	52050608	52050707	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:52159888;1allele=C/A;version=Hapmap2;RS=rs131251482;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	52129249	52129348	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52219474;1allele=A/G;version=Hapmap2;RS=rs808664559;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	52132745	52132844	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52222970;1allele=T/A;version=Hapmap2;RS=rs845560846;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	52134870	52134969	.	+	.	Name=Tassel_length;B73v2_pos=1:52225095;1allele=A/G;version=Hapmap2;RS=rs276248131;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	52136847	52136946	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52226047;1allele=C/T;version=Hapmap2;RS=rs845527078;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	52138426	52138525	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:52227626;1allele=G/A;version=Hapmap2;RS=rs128439959;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	52140860	52140959	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:52230060;1allele=A/T;version=Hapmap2;RS=rs128439985;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	52140899	52140998	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52230099;1allele=T/A;version=Hapmap2;RS=rs816843808;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	52140980	52141079	.	+	.	Name=Starch;B73v2_pos=1:52230180;1allele=A/T;version=Hapmap2;RS=rs840597813;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	52186113	52186212	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52306720;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52205284	52205383	.	+	.	Name=Tassel_length;B73v2_pos=1:52250524;1allele=A/G;version=Hapmap2;RS=rs128440009;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	52205916	52206015	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:52251156;1allele=G/T;version=Hapmap2;RS=rs276248177;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	52208143	52208242	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:52253383;1allele=T/C;version=Hapmap1;RS=rs131251579;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	52235576	52235675	.	+	.	Name=Ear_row_number;B73v2_pos=1:52320819;1allele=C/T;version=Hapmap2;RS=rs809764590;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	52236110	52236209	.	+	.	Name=Ear_row_number;B73v2_pos=1:52321353;1allele=T/C;version=Hapmap2;RS=rs815305513;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	52236400	52236499	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:52321643;1allele=G/A;version=Hapmap1;RS=rs843197545;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	52241404	52241503	.	+	.	Name=Ear_row_number;B73v2_pos=1:52326651;1allele=G/A;version=Hapmap2;RS=rs817558290;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	52241424	52241523	.	+	.	Name=Ear_row_number;B73v2_pos=1:52326671;1allele=G/C;version=Hapmap2;RS=rs128440102;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	52241891	52241990	.	+	.	Name=Ear_row_number;B73v2_pos=1:52327138;1allele=C/G;version=Hapmap2;RS=rs128440111;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	52375464	52375563	.	+	.	Name=Tassel_length;B73v2_pos=1:53037698;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52384354	52384453	.	+	.	Name=Tassel_length;B73v2_pos=1:53028808;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52457339	52457438	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:52955825;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52458131	52458230	.	+	.	Name=Ear_row_number;B73v2_pos=1:52955033;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52466200	52466299	.	+	.	Name=Tassel_length;B73v2_pos=1:52946964;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52485434	52485533	.	+	.	Name=Leaf_length;B73v2_pos=1:52925363;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52485818	52485917	.	+	.	Name=Glutamate;B73v2_pos=1:52924979;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52485818	52485917	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:52924979;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52486134	52486233	.	+	.	Name=Tassel_length;B73v2_pos=1:52924663;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52486290	52486389	.	+	.	Name=Ear_row_number;B73v2_pos=1:52924507;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52486335	52486434	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:52924462;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52486837	52486936	.	+	.	Name=Tassel_length;B73v2_pos=1:52923960;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52487740	52487839	.	+	.	Name=Cob_diameter;B73v2_pos=1:52923057;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52487740	52487839	.	+	.	Name=Ear_row_number;B73v2_pos=1:52923057;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52487913	52488012	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:52922884;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52489048	52489147	.	+	.	Name=Tassel_length;B73v2_pos=1:52921749;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52507267	52507366	.	+	.	Name=Leaf_length;B73v2_pos=1:52907401;1allele=T/C;version=Hapmap2;RS=rs804474704;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	52507267	52507366	.	+	.	Name=Tassel_length;B73v2_pos=1:52907401;1allele=T/C;version=Hapmap2;RS=rs804474704;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	52507283	52507382	.	+	.	Name=Tassel_length;B73v2_pos=1:52907385;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52507287	52507386	.	+	.	Name=Tassel_length;B73v2_pos=1:52907381;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52507288	52507387	.	+	.	Name=Tassel_length;B73v2_pos=1:52907380;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52546588	52546687	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52857501;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52565413	52565512	.	+	.	Name=Tassel_length;B73v2_pos=1:52837324;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52566375	52566474	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52836362;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52570860	52570959	.	+	.	Name=Tassel_length;B73v2_pos=1:52831872;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52600376	52600475	.	+	.	Name=Ear_row_number;B73v2_pos=1:52810949;1allele=G/A;version=Hapmap2;RS=rs1061930898;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	52758712	52758811	.	+	.	Name=Ear_row_number;B73v2_pos=1:52636073;1allele=A/G;version=Hapmap2;RS=rs821244272;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	52762269	52762368	.	+	.	Name=Tassel_length;B73v2_pos=1:52632516;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52766895	52766994	.	+	.	Name=Protein;B73v2_pos=1:52627890;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52785682	52785781	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:52609103;1allele=G/A;version=Hapmap1;RS=rs727128354;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	52785913	52786012	.	+	.	Name=Ear_row_number;B73v2_pos=1:52608872;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52792277	52792376	.	+	.	Name=Glutamate;B73v2_pos=1:52602508;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52823859	52823958	.	+	.	Name=Ear_row_number;B73v2_pos=1:52569820;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52824829	52824928	.	+	.	Name=Leaf_length;B73v2_pos=1:52568850;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52826391	52826490	.	+	.	Name=Ear_row_number;B73v2_pos=1:52567288;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52851350	52851449	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52542316;1allele=C/T;version=Hapmap2;RS=rs821814580;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	52852360	52852459	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:52541306;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52909752	52909851	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:52468348;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	52914306	52914405	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:52463794;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	53039332	53039431	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:52348981;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	53042207	53042306	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:52346106;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	53042316	53042415	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:52345997;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	53150650	53150749	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:53070497;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	53182372	53182471	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:53125670;1allele=C/A;version=Hapmap2;RS=rs725893079;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	53187082	53187181	.	+	.	Name=Ear_row_number;B73v2_pos=1:53130380;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	53188320	53188419	.	+	.	Name=Ear_row_number;B73v2_pos=1:53131618;1allele=C/G;version=Hapmap2;RS=rs837409614;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	53188353	53188452	.	+	.	Name=Ear_row_number;B73v2_pos=1:53131651;1allele=T/C;version=Hapmap2;RS=rs832174363;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	53217927	53218026	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:53161225;1allele=T/A;version=Hapmap2;RS=rs840535741;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	53219800	53219899	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:53163098;1allele=A/G;version=Hapmap2;RS=rs869450474;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	53222126	53222225	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:53165424;1allele=A/G;version=Hapmap2;RS=rs827056928;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	53222155	53222254	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:53165453;1allele=A/C;version=Hapmap2;RS=rs847991411;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	53222155	53222254	.	+	.	Name=Glutamate;B73v2_pos=1:53165453;1allele=A/C;version=Hapmap2;RS=rs847991411;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	53405845	53405944	.	+	.	Name=Leaf_length;B73v2_pos=1:53347330;1allele=A/G;version=Hapmap2;RS=rs816782929;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	53406094	53406193	.	+	.	Name=Leaf_length;B73v2_pos=1:53347579;1allele=A/G;version=Hapmap2;RS=rs845962796;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	53463921	53464020	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:53405958;1allele=T/C;version=Hapmap2;RS=rs128441660;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	53475878	53475977	.	+	.	Name=Tassel_length;B73v2_pos=1:53417916;1allele=C/T;version=Hapmap1;RS=rs131253131;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	53476442	53476541	.	+	.	Name=Cob_diameter;B73v2_pos=1:53418480;1allele=T/A;version=Hapmap2;RS=rs727479534;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	53476503	53476602	.	+	.	Name=Cob_diameter;B73v2_pos=1:53418541;1allele=G/C;version=Hapmap2;RS=rs821077081;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	53476695	53476794	.	+	.	Name=Cob_diameter;B73v2_pos=1:53418733;1allele=/ATTAGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	53476716	53476815	.	+	.	Name=Ear_row_number;B73v2_pos=1:53418754;1allele=A/C;version=Hapmap1;RS=rs842079606;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	53534705	53534804	.	+	.	Name=Glutamate;B73v2_pos=1:53467847;1allele=G/C;version=Hapmap2;RS=rs825151313;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	53596491	53596590	.	+	.	Name=Malate;B73v2_pos=1:53529435;1allele=A/G;version=Hapmap2;RS=rs824158075;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	53677742	53677841	.	+	.	Name=Glutamate;B73v2_pos=1:53601971;1allele=C/T;version=Hapmap1;RS=rs131253337;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	53912854	53912953	.	+	.	Name=Tassel_length;B73v2_pos=1:53837911;1allele=A/G;version=Hapmap2;RS=rs128441969;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	54146277	54146376	.	+	.	Name=Starch;B73v2_pos=1:54070483;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	54225871	54225970	.	+	.	Name=Tassel_length;B73v2_pos=1:54151845;1allele=G/A;version=Hapmap2;RS=rs837239876;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	54273259	54273358	.	+	.	Name=Tassel_length;B73v2_pos=1:54191534;1allele=C/A;version=Hapmap2;RS=rs823048922;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	54445090	54445189	.	+	.	Name=Cob_diameter;B73v2_pos=1:54393023;1allele=A/G;version=Hapmap2;RS=rs801658172;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	54465590	54465689	.	+	.	Name=Cob_diameter;B73v2_pos=1:54412089;1allele=A/C;version=Hapmap2;RS=rs814207836;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	54478656	54478755	.	+	.	Name=Cob_diameter;B73v2_pos=1:54323326;1allele=C/T;version=Hapmap2;RS=rs128442567;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	54479117	54479216	.	+	.	Name=Leaf_width;B73v2_pos=1:54323787;1allele=C/A;version=Hapmap2;RS=rs823765541;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	54502340	54502439	.	+	.	Name=Cob_diameter;B73v2_pos=1:54347006;1allele=G/A;version=Hapmap2;RS=rs830414108;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	55154338	55154437	.	+	.	Name=Leaf_width;B73v2_pos=1:55079276;1allele=T/C;version=Hapmap2;RS=rs842055995;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	55413991	55414090	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:55324748;1allele=A/T;version=Hapmap2;RS=rs276252713;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	55451476	55451575	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:55354059;1allele=A/G;version=Hapmap2;RS=rs1060807170;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	55594928	55595027	.	+	.	Name=Tassel_length;B73v2_pos=1:55506797;1allele=C/T;version=Hapmap2;RS=rs802608944;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	56086932	56087031	.	+	.	Name=Leaf_width;B73v2_pos=1:55971341;1allele=A/G;version=Hapmap2;RS=rs128444587;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	56188287	56188386	.	+	.	Name=Cob_diameter;B73v2_pos=1:56072483;1allele=T/G;version=Hapmap2;RS=rs817578284;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	56188412	56188511	.	+	.	Name=Cob_diameter;B73v2_pos=1:56072608;1allele=G/T;version=Hapmap2;RS=rs832590895;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	56281739	56281838	.	+	.	Name=Leaf_length;B73v2_pos=1:56159484;1allele=G/C;version=Hapmap1;RS=rs128444757;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	56329663	56329762	.	+	.	Name=Tassel_length;B73v2_pos=1:56206985;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	56342852	56342951	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:56220485;1allele=T/C;version=Hapmap2;RS=rs276254436;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	56441874	56441973	.	+	.	Name=Cob_diameter;B73v2_pos=1:56323822;1allele=G/A;version=Hapmap2;RS=rs837431479;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	56477563	56477662	.	+	.	Name=Leaf_width;B73v2_pos=1:56356994;1allele=T/C;version=Hapmap1;RS=rs131255622;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	56683470	56683569	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:56563944;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	56684177	56684276	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:56564651;1allele=C/T;version=Hapmap2;RS=rs276254626;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	56686161	56686260	.	+	.	Name=Leaf_width;B73v2_pos=1:56566635;1allele=A/C;version=Hapmap2;RS=rs822330437;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	56697404	56697503	.	+	.	Name=Protein;B73v2_pos=1:56577878;1allele=G/A;version=Hapmap2;RS=rs276254678;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	56699206	56699305	.	+	.	Name=Protein;B73v2_pos=1:56579681;1allele=C/G;version=Hapmap2;RS=rs802432191;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	56835789	56835888	.	+	.	Name=Cob_diameter;B73v2_pos=1:56688045;1allele=C/A;version=Hapmap2;RS=rs833390889;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	56887873	56887972	.	+	.	Name=Starch;B73v2_pos=1:56760768;1allele=A/G;version=Hapmap2;RS=rs834805300;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	56995567	56995666	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:56866612;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	57195376	57195475	.	+	.	Name=Tassel_length;B73v2_pos=1:57064575;1allele=T/C;version=Hapmap2;RS=rs276255354;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	57239193	57239292	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:57103789;1allele=T/C;version=Hapmap2;RS=rs128446149;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	57357210	57357309	.	+	.	Name=Leaf_width;B73v2_pos=1:57211218;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	57420407	57420506	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:57347519;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	57447468	57447567	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:57288923;1allele=T/C;version=Hapmap2;RS=rs726661007;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	57919980	57920079	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:57821065;1allele=G/A;version=Hapmap2;RS=rs833145379;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	58117272	58117371	.	+	.	Name=Leaf_length;B73v2_pos=1:58022454;1allele=A/G;version=Hapmap2;RS=rs815636090;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	58120429	58120528	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:58025611;1allele=G/A;version=Hapmap2;RS=rs128446661;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	58403779	58403878	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:58343235;1allele=C/T;version=Hapmap2;RS=rs825770106;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	58520904	58521003	.	+	.	Name=Leaf_length;B73v2_pos=1:58460930;1allele=C/G;version=Hapmap2;RS=rs810224578;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	58533777	58533876	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:58473801;1allele=C/G;version=Hapmap2;RS=rs276256675;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	58536011	58536110	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:58476035;1allele=G/A;version=Hapmap2;RS=rs811144899;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	58536310	58536409	.	+	.	Name=Tassel_length;B73v2_pos=1:58476334;1allele=T/A;version=Hapmap2;RS=rs813395816;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	58536311	58536410	.	+	.	Name=Tassel_length;B73v2_pos=1:58476335;1allele=G/A;version=Hapmap2;RS=rs816589613;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	58602778	58602877	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:58542723;1allele=C/G;version=Hapmap2;RS=rs128447099;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	58611786	58611885	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:58552353;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	58718239	58718338	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:58639184;1allele=A/G;version=Hapmap2;RS=rs846746386;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	58726547	58726646	.	+	.	Name=Cob_diameter;B73v2_pos=1:58647494;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	58733227	58733326	.	+	.	Name=Cob_diameter;B73v2_pos=1:58654174;1allele=G/A;version=Hapmap2;RS=rs276256987;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	58801588	58801687	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:58717380;1allele=A/G;version=Hapmap2;RS=rs128447236;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	58814930	58815029	.	+	.	Name=Leaf_width;B73v2_pos=1:58727756;1allele=G/A;version=Hapmap2;RS=rs843681940;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	58870082	58870181	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:58788530;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	58881753	58881852	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:58800204;1allele=C/T;version=Hapmap2;RS=rs128447472;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	59014697	59014796	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:58932206;1allele=A/G;version=Hapmap2;RS=rs819254927;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	59028790	59028889	.	+	.	Name=Stalk_strength;B73v2_pos=1:58946299;1allele=G/A;version=Hapmap2;RS=rs836567886;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	59084291	59084390	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:59001803;1allele=A/G;version=Hapmap2;RS=rs826234362;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	59112340	59112439	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:59029382;1allele=T/C;version=Hapmap2;RS=rs803664223;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	59245928	59246027	.	+	.	Name=Protein;B73v2_pos=1:59136744;1allele=C/T;version=Hapmap2;RS=rs276258130;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	59383813	59383912	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:59279957;1allele=T/G;version=Hapmap2;RS=rs1063109544;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	59395472	59395571	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:59291622;1allele=T/G;version=Hapmap2;RS=rs128448416;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	59468930	59469029	.	+	.	Name=Plant_height;B73v2_pos=1:59359188;1allele=A/G;version=Hapmap1;RS=rs131257489;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	59568986	59569085	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:59464659;1allele=C/A;version=Hapmap2;RS=rs829935992;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	59608757	59608856	.	+	.	Name=Leaf_width;B73v2_pos=1:59504538;1allele=C/T;version=Hapmap2;RS=rs824372342;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	59612671	59612770	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:59508452;1allele=C/A;version=Hapmap2;RS=rs131257575;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	59676490	59676589	.	+	.	Name=Tassel_length;B73v2_pos=1:59547641;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	59727366	59727465	.	+	.	Name=Cob_diameter;B73v2_pos=1:59597069;1allele=C/T;version=Hapmap2;RS=rs839194393;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	59809042	59809141	.	+	.	Name=Leaf_length;B73v2_pos=1:59669052;1allele=C/T;version=Hapmap2;RS=rs808096596;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	59922431	59922530	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:59783596;1allele=C/T;version=Hapmap2;RS=rs128448892;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	59932520	59932619	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:59793685;1allele=A/G;version=Hapmap2;RS=rs128448911;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	59938733	59938832	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:59799898;1allele=A/G;version=Hapmap2;RS=rs806221406;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	59972392	59972491	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:59833561;1allele=G/A;version=Hapmap2;RS=rs836041015;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	60000989	60001088	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:59860035;1allele=T/A;version=Hapmap2;RS=rs276258805;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	60005506	60005605	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:59864552;1allele=G/T;version=Hapmap1;RS=rs131257812;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	60155223	60155322	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:60006195;1allele=C/T;version=Hapmap2;RS=rs128449223;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	60155383	60155482	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:60006355;1allele=G/A;version=Hapmap2;RS=rs802057541;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	60250099	60250198	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:60103248;1allele=A/G;version=Hapmap2;RS=rs1063002184;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	60264081	60264180	.	+	.	Name=Cob_diameter;B73v2_pos=1:60117232;1allele=G/C;version=Hapmap2;RS=rs843020772;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	60264130	60264229	.	+	.	Name=Cob_diameter;B73v2_pos=1:60117281;1allele=G/A;version=Hapmap2;RS=rs821018225;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	60272144	60272243	.	+	.	Name=Tassel_length;B73v2_pos=1:60126270;1allele=C/T;version=Hapmap2;RS=rs805731659;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	60276414	60276513	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:60130541;1allele=A/T;version=Hapmap2;RS=rs850128498;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	60402070	60402169	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:60261364;1allele=C/T;version=Hapmap2;RS=rs128449727;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	60497483	60497582	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:60448843;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	60866370	60866469	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:60729575;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	60869709	60869808	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:60726236;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	60873620	60873719	.	+	.	Name=Leaf_width;B73v2_pos=1:60722325;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	60893484	60893583	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:60754675;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	60903717	60903816	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:60744442;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	60932362	60932461	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:60867330;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	60936152	60936251	.	+	.	Name=Plant_height;B73v2_pos=1:60871120;1allele=T/G;version=Hapmap2;RS=rs814990155;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	60938714	60938813	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:60873682;1allele=A/G;version=Hapmap2;RS=rs726633728;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	60938968	60939067	.	+	.	Name=Tassel_length;B73v2_pos=1:60873936;1allele=C/A;version=Hapmap2;RS=rs727085158;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	60939653	60939752	.	+	.	Name=Tassel_length;B73v2_pos=1:60874621;1allele=T/C;version=Hapmap2;RS=rs820011789;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	60940325	60940424	.	+	.	Name=Tassel_length;B73v2_pos=1:60875293;1allele=A/G;version=Hapmap2;RS=rs817800565;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	60941016	60941115	.	+	.	Name=Tassel_length;B73v2_pos=1:60875984;1allele=C/G;version=Hapmap2;RS=rs805683266;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	60984979	60985078	.	+	.	Name=Tassel_length;B73v2_pos=1:60920470;1allele=T/C;version=Hapmap2;RS=rs824259054;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	60986417	60986516	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:60921908;1allele=C/A;version=Hapmap2;RS=rs1063963866;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	60996983	60997082	.	+	.	Name=Plant_height;B73v2_pos=1:60803374;1allele=G/A;version=Hapmap2;RS=rs725186147;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	61002299	61002398	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:60808690;1allele=C/A;version=Hapmap2;RS=rs128450399;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	61262802	61262901	.	+	.	Name=Leaf_width;B73v2_pos=1:61140881;1allele=A/T;version=Hapmap2;RS=rs128451224;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	61756649	61756748	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:61623408;1allele=G/A;version=Hapmap2;RS=rs128451772;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	61858189	61858288	.	+	.	Name=Protein;B73v2_pos=1:61724703;1allele=A/C;version=Hapmap2;RS=rs1063381789;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	61888884	61888983	.	+	.	Name=Protein;B73v2_pos=1:61753404;1allele=G/A;version=Hapmap2;RS=rs128452268;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	61892448	61892547	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:61756969;1allele=G/A;version=Hapmap2;RS=rs128452327;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	61954587	61954685	.	+	.	Name=Cob_diameter;B73v2_pos=1:61818543;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	62083393	62083492	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:61946757;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	62159071	62159170	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:62022142;1allele=C/T;version=Hapmap2;RS=rs836927331;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	62298892	62298991	.	+	.	Name=Protein;B73v2_pos=1:62164062;1allele=T/C;version=Hapmap2;RS=rs276261859;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	62308595	62308694	.	+	.	Name=Protein;B73v2_pos=1:62173765;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	62493865	62493964	.	+	.	Name=Cob_diameter;B73v2_pos=1:62358054;1allele=G/T;version=Hapmap2;RS=rs841002187;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	62496482	62496581	.	+	.	Name=Ear_row_number;B73v2_pos=1:62360671;1allele=A/G;version=Hapmap2;RS=rs726524888;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	62552636	62552735	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:62432431;1allele=C/A;version=Hapmap2;RS=rs822858634;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	62553449	62553548	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:62433244;1allele=G/A;version=Hapmap2;RS=rs820276603;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	62578782	62578881	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:62458579;1allele=G/A;version=Hapmap2;RS=rs838476068;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	62619651	62619750	.	+	.	Name=Leaf_width;B73v2_pos=1:62499450;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	62620014	62620113	.	+	.	Name=Leaf_width;B73v2_pos=1:62499813;1allele=A/G;version=Hapmap2;RS=rs727303270;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	62664673	62664772	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:62532187;1allele=G/A;version=Hapmap2;RS=rs841182392;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	62896609	62896708	.	+	.	Name=Height_above_ear;B73v2_pos=1:62698402;1allele=G/A;version=Hapmap2;RS=rs802009081;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	62903320	62903419	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:62705113;1allele=T/C;version=Hapmap2;RS=rs1061303001;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	62904704	62904803	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:62706497;1allele=C/G;version=Hapmap2;RS=rs1060815313;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	63032820	63032919	.	+	.	Name=Ear_height;B73v2_pos=1:62899777;1allele=C/T;version=Hapmap2;RS=rs276262623;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	63145399	63145498	.	+	.	Name=Ear_row_number;B73v2_pos=1:63007189;1allele=C/A;version=Hapmap2;RS=rs809875552;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	63170276	63170375	.	+	.	Name=Plant_height;B73v2_pos=1:63032067;1allele=C/T;version=Hapmap2;RS=rs276262801;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63173028	63173127	.	+	.	Name=Leaf_width;B73v2_pos=1:63034819;1allele=C/G;version=Hapmap2;RS=rs131260002;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63180054	63180153	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:63041845;1allele=G/A;version=Hapmap2;RS=rs727423965;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	63250171	63250270	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:63108146;1allele=C/T;version=Hapmap2;RS=rs131260111;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63310095	63310194	.	+	.	Name=Leaf_length;B73v2_pos=1:63167994;1allele=T/C;version=Hapmap2;RS=rs819206793;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	63354605	63354704	.	+	.	Name=Cob_diameter;B73v2_pos=1:63207974;1allele=C/T;version=Hapmap2;RS=rs838789388;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63362181	63362280	.	+	.	Name=Leaf_length;B73v2_pos=1:63215549;1allele=G/A;version=Hapmap2;RS=rs830465642;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	63413328	63413427	.	+	.	Name=Tassel_length;B73v2_pos=1:63290716;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	63476896	63476995	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:63328432;1allele=A/G;version=Hapmap2;RS=rs808952224;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	63481157	63481256	.	+	.	Name=Leaf_length;B73v2_pos=1:63332693;1allele=C/T;version=Hapmap2;RS=rs276263539;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63484067	63484166	.	+	.	Name=Tassel_length;B73v2_pos=1:63335603;1allele=G/C;version=Hapmap2;RS=rs276263548;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	63506584	63506683	.	+	.	Name=Tassel_length;B73v2_pos=1:63358124;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	63610557	63610656	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:63461095;1allele=C/T;version=Hapmap2;RS=rs802118857;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63650532	63650631	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:63501072;1allele=A/G;version=Hapmap2;RS=rs836388985;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	63743230	63743329	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:63585160;1allele=C/T;version=Hapmap2;RS=rs814867028;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63743230	63743329	.	+	.	Name=Leaf_width;B73v2_pos=1:63585160;1allele=C/T;version=Hapmap2;RS=rs814867028;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	63748229	63748328	.	+	.	Name=Leaf_width;B73v2_pos=1:63590159;1allele=A/G;version=Hapmap2;RS=rs831149883;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	63797760	63797859	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:63639118;1allele=G/T;version=Hapmap2;RS=rs128456068;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	63828023	63828122	.	+	.	Name=Cob_diameter;B73v2_pos=1:63663318;1allele=C/T;version=Hapmap2;RS=rs848416442;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	64022164	64022263	.	+	.	Name=Ear_row_number;B73v2_pos=1:63891317;1allele=T/C;version=Hapmap2;RS=rs812591694;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	64024539	64024638	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:63893692;1allele=A/T;version=Hapmap2;RS=rs824851666;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	64037011	64037110	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:63906511;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	64141949	64142048	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:64011655;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	64214249	64214348	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:64083671;1allele=G/A;version=Hapmap2;RS=rs826637676;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	64228470	64228569	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:64097890;1allele=C/A;version=Hapmap2;RS=rs128456860;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	64230543	64230642	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:64099963;1allele=G/T;version=Hapmap2;RS=rs276264430;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	64254524	64254623	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:64123183;1allele=C/A;version=Hapmap2;RS=rs276264581;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	64256501	64256600	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:64125160;1allele=A/C;version=Hapmap2;RS=rs128457019;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	64256533	64256632	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:64125192;1allele=G/T;version=Hapmap2;RS=rs276264609;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	64258687	64258786	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:64127346;1allele=T/C;version=Hapmap2;RS=rs128457039;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	64524122	64524221	.	+	.	Name=Ear_row_number;B73v2_pos=1:64414526;1allele=G/A;version=Hapmap2;RS=rs824378654;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	64524946	64525045	.	+	.	Name=Cob_diameter;B73v2_pos=1:64413702;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	64524958	64525057	.	+	.	Name=Cob_diameter;B73v2_pos=1:64413690;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	64697596	64697695	.	+	.	Name=Protein;B73v2_pos=1:64539685;1allele=C/A;version=Hapmap2;RS=rs824258276;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	64702928	64703027	.	+	.	Name=Ear_row_number;B73v2_pos=1:64545236;1allele=T/C;version=Hapmap2;RS=rs128457662;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	64709100	64709199	.	+	.	Name=Cob_diameter;B73v2_pos=1:64551408;1allele=C/T;version=Hapmap2;RS=rs818838160;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	64764381	64764480	.	+	.	Name=Protein;B73v2_pos=1:64606690;1allele=G/A;version=Hapmap2;RS=rs829793873;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	64778468	64778567	.	+	.	Name=Cob_diameter;B73v2_pos=1:64620777;1allele=G/A;version=Hapmap2;RS=rs128457742;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	64933821	64933920	.	+	.	Name=Protein;B73v2_pos=1:64775188;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	65044937	65045036	.	+	.	Name=Protein;B73v2_pos=1:64889351;1allele=A/C;version=Hapmap1;RS=rs131261357;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	65054248	65054347	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:64898189;1allele=A/G;version=Hapmap2;RS=rs1062482549;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	65097300	65097399	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:64941241;1allele=C/T;version=Hapmap2;RS=rs128458394;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	65113125	65113224	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:64968418;1allele=T/C;version=Hapmap1;RS=rs131261409;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	65114205	65114304	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:64969498;1allele=C/G;version=Hapmap2;RS=rs128458439;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	65116518	65116617	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:64971811;1allele=C/A;version=Hapmap2;RS=rs276265491;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	65119119	65119218	.	+	.	Name=Protein;B73v2_pos=1:64974412;1allele=C/A;version=Hapmap2;RS=rs847379280;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	65123497	65123596	.	+	.	Name=Cob_diameter;B73v2_pos=1:64978790;1allele=C/G;version=Hapmap2;RS=rs842480968;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	65124819	65124918	.	+	.	Name=Cob_diameter;B73v2_pos=1:64980112;1allele=C/A;version=Hapmap2;RS=rs843280160;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	65202725	65202824	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:65038712;1allele=T/C;version=Hapmap2;RS=rs128458544;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	65205278	65205377	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:65041191;1allele=G/A;version=Hapmap2;RS=rs128458558;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	65206813	65206912	.	+	.	Name=Protein;B73v2_pos=1:65042726;1allele=G/A;version=Hapmap2;RS=rs820114833;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	65211909	65212008	.	+	.	Name=Protein;B73v2_pos=1:65047822;1allele=C/T;version=Hapmap2;RS=rs833377486;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	65212105	65212204	.	+	.	Name=Protein;B73v2_pos=1:65048018;1allele=T/C;version=Hapmap2;RS=rs819830775;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	65212248	65212347	.	+	.	Name=Protein;B73v2_pos=1:65048161;1allele=C/T;version=Hapmap2;RS=rs814345577;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	65229335	65229434	.	+	.	Name=Protein;B73v2_pos=1:65065253;1allele=C/T;version=Hapmap2;RS=rs845383145;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	65229843	65229942	.	+	.	Name=Protein;B73v2_pos=1:65065761;1allele=C/T;version=Hapmap2;RS=rs827020966;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	65249524	65249623	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:65085442;1allele=A/T;version=Hapmap2;RS=rs820846214;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	65249730	65249829	.	+	.	Name=Protein;B73v2_pos=1:65085648;1allele=A/C;version=Hapmap2;RS=rs817310485;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	65251189	65251288	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:65087107;1allele=T/G;version=Hapmap2;RS=rs726119661;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	65252179	65252278	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:65088097;1allele=C/G;version=Hapmap2;RS=rs131261495;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	65254227	65254326	.	+	.	Name=Protein;B73v2_pos=1:65090145;1allele=C/T;version=Hapmap2;RS=rs128458745;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	65256784	65256883	.	+	.	Name=Protein;B73v2_pos=1:65092702;1allele=A/T;version=Hapmap2;RS=rs128458758;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	65352702	65352801	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:65188075;1allele=G/A;version=Hapmap2;RS=rs810826952;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	65466196	65466295	.	+	.	Name=Protein;B73v2_pos=1:65306354;1allele=A/T;version=Hapmap2;RS=rs843058538;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	65643049	65643148	.	+	.	Name=Ear_row_number;B73v2_pos=1:65480242;1allele=G/A;version=Hapmap2;RS=rs276266266;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	65647875	65647974	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:65485062;1allele=T/C;version=Hapmap1;RS=rs131261641;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	65911793	65911892	.	+	.	Name=Cob_diameter;B73v2_pos=1:65619023;1allele=G/T;version=Hapmap2;RS=rs128459685;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	66871412	66871511	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:66013631;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67447426	67447525	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:67471037;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67488126	67488225	.	+	.	Name=Protein;B73v2_pos=1:67433067;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67553912	67554011	.	+	.	Name=Ear_row_number;B73v2_pos=1:67360614;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67764555	67764654	.	+	.	Name=Protein;B73v2_pos=1:67158082;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67826044	67826143	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:67082522;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67831859	67831958	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:67076707;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67854725	67854824	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:67053855;1allele=/TGGAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	67928755	67928854	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:66975853;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	68371106	68371205	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:67940466;1allele=T/C;version=Hapmap2;RS=rs830922407;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	68425772	68425871	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:67985094;1allele=C/A;version=Hapmap2;RS=rs131262086;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	68464408	68464507	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:68030338;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	68560638	68560737	.	+	.	Name=Ear_row_number;B73v2_pos=1:68108863;1allele=T/C;version=Hapmap2;RS=rs829761154;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	68561499	68561598	.	+	.	Name=Ear_row_number;B73v2_pos=1:68109724;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	68564117	68564216	.	+	.	Name=Ear_row_number;B73v2_pos=1:68112342;1allele=T/C;version=Hapmap2;RS=rs804330724;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	68582309	68582408	.	+	.	Name=Ear_row_number;B73v2_pos=1:68130996;1allele=T/G;version=Hapmap2;RS=rs847342361;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	68692502	68692601	.	+	.	Name=Protein;B73v2_pos=1:68240862;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	68860265	68860364	.	+	.	Name=Stalk_strength;B73v2_pos=1:68408693;1allele=+/-;version=Hapmap2;RS=rs834584018;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	68896329	68896428	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:68444178;1allele=C/G;version=Hapmap1;RS=rs131262357;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	69016364	69016463	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:68564217;1allele=C/T;version=Hapmap2;RS=rs128461458;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	69095920	69096019	.	+	.	Name=Ear_row_number;B73v2_pos=1:68648303;1allele=G/A;version=Hapmap2;RS=rs836603525;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	69131549	69131648	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:68683577;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	69307164	69307263	.	+	.	Name=Height_above_ear;B73v2_pos=1:68856368;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	69383692	69383791	.	+	.	Name=Plant_height;B73v2_pos=1:68930554;1allele=C/T;version=Hapmap2;RS=rs276269671;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	69477131	69477230	.	+	.	Name=Plant_height;B73v2_pos=1:69007083;1allele=A/G;version=Hapmap2;RS=rs128462245;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	69480547	69480646	.	+	.	Name=Plant_height;B73v2_pos=1:69010499;1allele=C/T;version=Hapmap2;RS=rs128462259;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	69753077	69753176	.	+	.	Name=Leaf_width;B73v2_pos=1:69275659;1allele=T/C;version=Hapmap2;RS=rs724435946;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	69765594	69765693	.	+	.	Name=Cob_diameter;B73v2_pos=1:69288176;1allele=G/C;version=Hapmap2;RS=rs131262673;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	69889393	69889492	.	+	.	Name=Protein;B73v2_pos=1:69406603;1allele=C/G;version=Hapmap2;RS=rs128462703;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	70205940	70206039	.	+	.	Name=Nitrate;B73v2_pos=1:69668473;1allele=G/A;version=Hapmap2;RS=rs810508574;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	70372842	70372941	.	+	.	Name=Nitrate;B73v2_pos=1:69834900;1allele=C/A;version=Hapmap2;RS=rs813878686;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	70378112	70378211	.	+	.	Name=Nitrate;B73v2_pos=1:69840170;1allele=C/A;version=Hapmap2;RS=rs822984783;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	70403832	70403931	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:69865267;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	70403832	70403931	.	+	.	Name=Height_above_ear;B73v2_pos=1:69865267;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	70404223	70404322	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:69865658;1allele=/GGCAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	70404509	70404608	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:69865944;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	70502323	70502422	.	+	.	Name=Leaf_width;B73v2_pos=1:69963609;1allele=T/G;version=Hapmap2;RS=rs128464638;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	70599839	70599938	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:70068822;1allele=C/T;version=Hapmap2;RS=rs836546104;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	70697977	70698076	.	+	.	Name=Protein;B73v2_pos=1:70161068;1allele=A/G;version=Hapmap2;RS=rs128465096;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	70783395	70783494	.	+	.	Name=Protein;B73v2_pos=1:70247906;1allele=G/A;version=Hapmap2;RS=rs128465275;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	70783420	70783519	.	+	.	Name=Protein;B73v2_pos=1:70247931;1allele=G/T;version=Hapmap2;RS=rs128465276;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	70785140	70785239	.	+	.	Name=Protein;B73v2_pos=1:70249651;1allele=C/T;version=Hapmap2;RS=rs128465282;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	70823711	70823810	.	+	.	Name=Protein;B73v2_pos=1:70286214;1allele=C/T;version=Hapmap2;RS=rs822261009;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	71080938	71081037	.	+	.	Name=Cob_diameter;B73v2_pos=1:70561402;1allele=C/A;version=Hapmap2;RS=rs848009039;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	71102463	71102562	.	+	.	Name=Protein;B73v2_pos=1:70582933;1allele=C/A;version=Hapmap2;RS=rs850196013;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	71140446	71140545	.	+	.	Name=Nitrate;B73v2_pos=1:70620713;1allele=T/C;version=Hapmap2;RS=rs802586467;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	71199480	71199579	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:70679662;1allele=G/A;version=Hapmap2;RS=rs823463116;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	71219631	71219730	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:70700730;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	71238851	71238950	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:70715084;1allele=A/G;version=Hapmap2;RS=rs806879161;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	71249386	71249485	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:70725620;1allele=C/T;version=Hapmap2;RS=rs830004634;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	71274105	71274204	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:70749962;1allele=G/A;version=Hapmap2;RS=rs843448052;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	71293693	71293792	.	+	.	Name=Protein;B73v2_pos=1:70769555;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	71293750	71293849	.	+	.	Name=Protein;B73v2_pos=1:70769612;1allele=G/T;version=Hapmap2;RS=rs846814156;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	71567452	71567551	.	+	.	Name=Plant_height;B73v2_pos=1:71024383;1allele=C/G;version=Hapmap2;RS=rs131264013;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	71645940	71646039	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71102888;1allele=A/G;version=Hapmap2;RS=rs831683202;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	71660765	71660864	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71117787;1allele=C/A;version=Hapmap2;RS=rs835560743;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	71660773	71660872	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71117795;1allele=A/G;version=Hapmap2;RS=rs840967057;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	71688990	71689089	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71146201;1allele=C/T;version=Hapmap2;RS=rs727397344;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	71700294	71700393	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71157505;1allele=A/T;version=Hapmap2;RS=rs845333709;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	71721200	71721299	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71180521;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	71722892	71722991	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71182213;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	72145883	72145982	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:71583598;1allele=G/T;version=Hapmap2;RS=rs726740061;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	72149889	72149988	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:71587604;1allele=T/A;version=Hapmap2;RS=rs811138593;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	72153984	72154083	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:71591699;1allele=A/G;version=Hapmap2;RS=rs833976566;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	72155572	72155671	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:71593286;1allele=A/T;version=Hapmap2;RS=rs821340289;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	72155732	72155831	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:71593446;1allele=A/C;version=Hapmap2;RS=rs276272559;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	72159767	72159866	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:71597481;1allele=G/A;version=Hapmap2;RS=rs128467242;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	72165511	72165610	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:71603225;1allele=G/A;version=Hapmap2;RS=rs128467307;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	72165522	72165621	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:71603236;1allele=C/T;version=Hapmap2;RS=rs804807216;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	72165575	72165674	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:71603289;1allele=A/T;version=Hapmap2;RS=rs276272596;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	72165867	72165966	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:71603581;1allele=C/T;version=Hapmap2;RS=rs818973419;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	72169130	72169229	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:71606844;1allele=A/G;version=Hapmap2;RS=rs128467343;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	72169983	72170082	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:71607697;1allele=C/G;version=Hapmap2;RS=rs128467355;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	72342791	72342890	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:71794881;1allele=G/C;version=Hapmap2;RS=rs815148585;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	72343683	72343782	.	+	.	Name=Protein;B73v2_pos=1:71795773;1allele=T/C;version=Hapmap2;RS=rs825005580;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	72625841	72625940	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:71998214;1allele=T/C;version=Hapmap2;RS=rs276272710;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	72635887	72635986	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:72014110;1allele=T/C;version=Hapmap1;RS=rs128467770;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	72717948	72718047	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:72114247;1allele=C/T;version=Hapmap2;RS=rs844783277;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	72799928	72800027	.	+	.	Name=Starch;B73v2_pos=1:72195806;1allele=T/C;version=Hapmap2;RS=rs846368106;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	72808118	72808217	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:72203997;1allele=T/C;version=Hapmap2;RS=rs276273039;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	72852619	72852718	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:72248639;1allele=C/T;version=Hapmap2;RS=rs848787068;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	72969054	72969153	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:72351810;1allele=T/A;version=Hapmap1;RS=rs835868186;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	73102486	73102585	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:72481782;1allele=C/G;version=Hapmap2;RS=rs128468414;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	73102486	73102585	.	+	.	Name=Ear_height;B73v2_pos=1:72481782;1allele=C/G;version=Hapmap2;RS=rs128468414;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	73241772	73241871	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:72624264;1allele=A/G;version=Hapmap2;RS=rs802538571;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	73274830	73274929	.	+	.	Name=Plant_height;B73v2_pos=1:72657324;1allele=C/A;version=Hapmap2;RS=rs836392098;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	73361016	73361115	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:72701421;1allele=C/G;version=Hapmap2;RS=rs824414634;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	73361654	73361753	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:72702059;1allele=A/G;version=Hapmap2;RS=rs128468786;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	73365295	73365394	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:72705695;1allele=G/A;version=Hapmap2;RS=rs128468758;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	73411465	73411564	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:72790158;1allele=C/T;version=Hapmap2;RS=rs829576562;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	73440679	73440778	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:72819374;1allele=C/T;version=Hapmap2;RS=rs825340944;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	73440853	73440952	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:72819548;1allele=T/C;version=Hapmap2;RS=rs839329919;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	73441175	73441274	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:72819870;1allele=G/A;version=Hapmap2;RS=rs817578900;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	73441350	73441449	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:72820045;1allele=C/T;version=Hapmap2;RS=rs128469067;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	73569707	73569806	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:72952459;1allele=A/T;version=Hapmap2;RS=rs830990099;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	73592247	73592346	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:72966705;1allele=C/T;version=Hapmap2;RS=rs814395774;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	73610808	73610907	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:72985267;1allele=C/G;version=Hapmap2;RS=rs807656501;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	73678976	73679075	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:73042343;1allele=T/G;version=Hapmap2;RS=rs841006653;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	73879511	73879610	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:73232272;1allele=G/A;version=Hapmap1;RS=rs131264937;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	73987179	73987278	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:73338877;1allele=C/T;version=Hapmap2;RS=rs822354071;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	73990681	73990780	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:73342378;1allele=C/G;version=Hapmap2;RS=rs128469998;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	73996830	73996929	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:73348527;1allele=T/C;version=Hapmap2;RS=rs840132596;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	74021219	74021318	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:73373228;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	74025616	74025715	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:73377625;1allele=T/C;version=Hapmap2;RS=rs822741045;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	74075860	74075959	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:73428146;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	74087528	74087627	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:73439816;1allele=G/C;version=Hapmap2;RS=rs128470186;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	74088361	74088460	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:73440649;1allele=G/A;version=Hapmap2;RS=rs833749205;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	74162765	74162864	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:73514737;1allele=C/T;version=Hapmap2;RS=rs814370703;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	74280597	74280696	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:73634467;1allele=G/A;version=Hapmap2;RS=rs812423442;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	74379886	74379985	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:73733234;1allele=A/G;version=Hapmap2;RS=rs128470484;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	74379886	74379985	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:73733234;1allele=A/G;version=Hapmap2;RS=rs128470484;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	74570132	74570231	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:73922096;1allele=C/T;version=Hapmap2;RS=rs1062842812;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	74585352	74585451	.	+	.	Name=Stalk_strength;B73v2_pos=1:73937316;1allele=G/T;version=Hapmap1;RS=rs131265219;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	74646567	74646666	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:74045179;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	74678104	74678203	.	+	.	Name=Stalk_strength;B73v2_pos=1:73994049;1allele=T/C;version=Hapmap2;RS=rs724432388;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	74702133	74702232	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:74017992;1allele=C/T;version=Hapmap2;RS=rs843745605;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	74782192	74782291	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:74122381;1allele=C/T;version=Hapmap2;RS=rs806660105;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	74923362	74923461	.	+	.	Name=Plant_height;B73v2_pos=1:74265006;1allele=T/C;version=Hapmap2;RS=rs845219369;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	74939377	74939476	.	+	.	Name=Height_above_ear;B73v2_pos=1:74280837;1allele=G/A;version=Hapmap2;RS=rs824913439;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	75031612	75031711	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:74416479;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	75033587	75033686	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:74418454;1allele=G/T;version=Hapmap2;RS=rs1060692924;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	75122765	75122864	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:74483000;1allele=A/G;version=Hapmap2;RS=rs837995590;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	75238732	75238831	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:74548053;1allele=A/G;version=Hapmap2;RS=rs824655849;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	75240526	75240625	.	+	.	Name=Ear_height;B73v2_pos=1:74549847;1allele=G/C;version=Hapmap2;RS=rs827166914;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	75344893	75344992	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281893354;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	75418757	75418856	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:74767069;1allele=T/G;version=Hapmap2;RS=rs128471864;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	75419610	75419709	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:74767922;1allele=G/C;version=Hapmap2;RS=rs803714232;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	75420350	75420449	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:74768662;1allele=A/G;version=Hapmap2;RS=rs276275227;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	75420350	75420449	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:74768662;1allele=A/G;version=Hapmap2;RS=rs276275227;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	75675399	75675498	.	+	.	Name=Plant_height;B73v2_pos=1:75006146;1allele=G/T;version=Hapmap2;RS=rs1064148198;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	75825193	75825292	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75146719;1allele=G/T;version=Hapmap2;RS=rs811551705;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	75830588	75830687	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:75141324;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	75868254	75868353	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75200560;1allele=G/T;version=Hapmap2;RS=rs128473010;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	75987357	75987456	.	+	.	Name=Leaf_length;B73v2_pos=1:75320431;1allele=A/G;version=Hapmap2;RS=rs808465904;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	75987687	75987786	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:75320761;1allele=C/T;version=Hapmap2;RS=rs128473168;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76055393	76055492	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:75391286;1allele=+/-;version=Hapmap2;RS=rs847562552;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	76063076	76063175	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75398973;1allele=G/A;version=Hapmap2;RS=rs276275994;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	76079055	76079154	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:75414953;1allele=A/G;version=Hapmap2;RS=rs813074405;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	76089734	76089833	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:75425633;1allele=C/A;version=Hapmap2;RS=rs128473345;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	76089871	76089970	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:75425770;1allele=G/A;version=Hapmap2;RS=rs128473348;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	76118075	76118174	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75453989;1allele=T/C;version=Hapmap2;RS=rs128473371;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	76119039	76119138	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75454953;1allele=G/C;version=Hapmap2;RS=rs128473378;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	76119303	76119402	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75455217;1allele=A/G;version=Hapmap2;RS=rs128473384;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	76121108	76121207	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:75457022;1allele=C/T;version=Hapmap2;RS=rs725348242;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76122068	76122167	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:75457982;1allele=T/C;version=Hapmap2;RS=rs276276095;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	76280649	76280748	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75630779;1allele=G/A;version=Hapmap2;RS=rs131265966;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	76291929	76292028	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:75642199;1allele=G/C;version=Hapmap2;RS=rs834661978;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	76295389	76295488	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:75646050;1allele=C/T;version=Hapmap2;RS=rs832365711;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76301965	76302064	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:75652625;1allele=C/T;version=Hapmap2;RS=rs726990966;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76301965	76302064	.	+	.	Name=Height_above_ear;B73v2_pos=1:75652625;1allele=C/T;version=Hapmap2;RS=rs726990966;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76303273	76303372	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:75653933;1allele=G/A;version=Hapmap2;RS=rs813477500;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	76337496	76337595	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:75691184;1allele=A/C;version=Hapmap2;RS=rs128473669;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	76472655	76472754	.	+	.	Name=Ear_height;B73v2_pos=1:75822520;1allele=A/G;version=Hapmap2;RS=rs1061825564;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	76487015	76487114	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:75836880;1allele=C/T;version=Hapmap2;RS=rs829715466;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76509859	76509958	.	+	.	Name=Plant_height;B73v2_pos=1:75860160;1allele=C/T;version=Hapmap2;RS=rs805264738;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76509859	76509958	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:75860160;1allele=C/T;version=Hapmap2;RS=rs805264738;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76593923	76594022	.	+	.	Name=Ear_height;B73v2_pos=1:75941534;1allele=C/T;version=Hapmap2;RS=rs128473997;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76593923	76594022	.	+	.	Name=Plant_height;B73v2_pos=1:75941534;1allele=C/T;version=Hapmap2;RS=rs128473997;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76593923	76594022	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:75941534;1allele=C/T;version=Hapmap2;RS=rs128473997;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76593923	76594022	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:75941534;1allele=C/T;version=Hapmap2;RS=rs128473997;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76609893	76609992	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:75957632;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	76833740	76833839	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:76115499;1allele=G/A;version=Hapmap2;RS=rs842841683;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	76839406	76839505	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:76121165;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	76921809	76921908	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:76201014;1allele=G/T;version=Hapmap2;RS=rs845962140;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	76921809	76921908	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:76201014;1allele=G/T;version=Hapmap2;RS=rs845962140;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	76957877	76957976	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:76237557;1allele=A/C;version=Hapmap2;RS=rs276277154;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	76957886	76957985	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:76237566;1allele=G/A;version=Hapmap2;RS=rs276277155;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	77025642	77025741	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:76313631;1allele=G/A;version=Hapmap2;RS=rs128474896;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	77201390	77201489	.	+	.	Name=Plant_height;B73v2_pos=1:76498755;1allele=G/A;version=Hapmap1;RS=rs128475223;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	77204704	77204803	.	+	.	Name=Plant_height;B73v2_pos=1:76502069;1allele=T/C;version=Hapmap2;RS=rs835195607;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	77395190	77395289	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:76678422;1allele=A/G;version=Hapmap2;RS=rs831248979;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	77568397	77568496	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:76847074;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	77591662	77591761	.	+	.	Name=Leaf_length;B73v2_pos=1:76870229;1allele=C/T;version=Hapmap2;RS=rs806203469;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	77741697	77741796	.	+	.	Name=Protein;B73v2_pos=1:77022592;1allele=T/A;version=Hapmap2;RS=rs841385636;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	77841804	77841903	.	+	.	Name=Leaf_length;B73v2_pos=1:77119039;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	77973957	77974056	.	+	.	Name=Height_above_ear;B73v2_pos=1:77250254;1allele=A/G;version=Hapmap1;RS=rs128476664;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	77976529	77976628	.	+	.	Name=Total_amino_acids;B73v2_pos=1:77252324;1allele=A/T;version=Hapmap2;RS=rs802734522;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	78062325	78062424	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:77262448;1allele=T/C;version=Hapmap2;RS=rs849346767;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78062574	78062673	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77262697;1allele=T/C;version=Hapmap2;RS=rs807529719;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78151175	78151274	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:77405632;1allele=G/A;version=Hapmap2;RS=rs1060946560;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78186670	78186769	.	+	.	Name=Plant_height;B73v2_pos=1:77441128;1allele=T/C;version=Hapmap2;RS=rs809408077;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78332008	78332107	.	+	.	Name=Plant_height;B73v2_pos=1:77584763;1allele=G/A;version=Hapmap2;RS=rs812380213;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78417800	78417899	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77670689;1allele=A/G;version=Hapmap2;RS=rs827182322;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78429329	78429428	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:77682217;1allele=C/T;version=Hapmap2;RS=rs276278865;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	78453782	78453881	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:77706668;1allele=A/G;version=Hapmap2;RS=rs832171447;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78455320	78455419	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77708206;1allele=A/G;version=Hapmap2;RS=rs815262423;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78455320	78455419	.	+	.	Name=Plant_height;B73v2_pos=1:77708206;1allele=A/G;version=Hapmap2;RS=rs815262423;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78460047	78460146	.	+	.	Name=Plant_height;B73v2_pos=1:77712933;1allele=T/C;version=Hapmap2;RS=rs808028557;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78531624	78531723	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:77783731;1allele=G/C;version=Hapmap2;RS=rs727198395;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	78543989	78544088	.	+	.	Name=Ear_height;B73v2_pos=1:77796096;1allele=G/T;version=Hapmap2;RS=rs812663591;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	78556307	78556406	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77808414;1allele=A/G;version=Hapmap2;RS=rs822081626;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78562064	78562163	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77814172;1allele=T/A;version=Hapmap2;RS=rs834317028;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	78595451	78595550	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:77847561;1allele=T/C;version=Hapmap2;RS=rs831730029;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78597170	78597269	.	+	.	Name=Plant_height;B73v2_pos=1:77849280;1allele=T/C;version=Hapmap2;RS=rs276279088;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	78598675	78598774	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77850785;1allele=T/C;version=Hapmap2;RS=rs810189107;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78598675	78598774	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:77850785;1allele=T/C;version=Hapmap2;RS=rs810189107;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78598675	78598774	.	+	.	Name=Plant_height;B73v2_pos=1:77850785;1allele=T/C;version=Hapmap2;RS=rs810189107;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78599149	78599248	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:77851259;1allele=C/A;version=Hapmap2;RS=rs804802933;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	78599980	78600079	.	+	.	Name=Ear_height;B73v2_pos=1:77852090;1allele=C/T;version=Hapmap2;RS=rs276279105;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	78632458	78632557	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77884856;1allele=G/A;version=Hapmap1;RS=rs131267393;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	78632458	78632557	.	+	.	Name=Plant_height;B73v2_pos=1:77884856;1allele=G/A;version=Hapmap1;RS=rs131267393;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	78633779	78633878	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:77886177;1allele=C/T;version=Hapmap2;RS=rs1063726032;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78639177	78639276	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:77891575;1allele=C/T;version=Hapmap2;RS=rs128478051;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78675345	78675444	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:77927744;1allele=A/G;version=Hapmap2;RS=rs842376642;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	78719153	78719252	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:77967225;1allele=T/C;version=Hapmap1;RS=rs128478153;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78801008	78801107	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:78091953;1allele=T/C;version=Hapmap2;RS=rs846437388;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	78905107	78905206	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:78024172;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	78905145	78905244	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:78024134;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	78952880	78952979	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:78199803;1allele=C/T;version=Hapmap2;RS=rs128478411;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	79052184	79052280	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:78299124;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	79537164	79537263	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:78813410;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	79871817	79871916	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:79130236;1allele=A/G;version=Hapmap2;RS=rs128648365;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	79966140	79966239	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:79232571;1allele=G/T;version=Hapmap2;RS=rs816567533;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	79995942	79996041	.	+	.	Name=Ear_row_number;B73v2_pos=1:79262373;1allele=C/G;version=Hapmap2;RS=rs817226867;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	80057487	80057586	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:79320703;1allele=G/A;version=Hapmap2;RS=rs849943291;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	80068685	80068784	.	+	.	Name=Leaf_width;B73v2_pos=1:79331901;1allele=G/T;version=Hapmap2;RS=rs815502824;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	80086290	80086389	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:79349652;1allele=+/-;version=Hapmap2;RS=rs813186249;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	80200037	80200136	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:79553122;1allele=G/T;version=Hapmap2;RS=rs837258059;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	80517335	80517434	.	+	.	Name=Plant_height;B73v2_pos=1:79703890;1allele=/CTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	80518623	80518722	.	+	.	Name=Plant_height;B73v2_pos=1:79705178;1allele=C/G;version=Hapmap2;RS=rs131268013;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	80518623	80518722	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:79705178;1allele=C/G;version=Hapmap2;RS=rs131268013;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	80582768	80582867	.	+	.	Name=Cob_diameter;B73v2_pos=1:79769258;1allele=C/T;version=Hapmap2;RS=rs846461174;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	80619739	80619838	.	+	.	Name=Tassel_length;B73v2_pos=1:184371295;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	80740774	80740873	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:79915135;1allele=C/A;version=Hapmap2;RS=rs128649911;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	80858512	80858611	.	+	.	Name=Plant_height;B73v2_pos=1:80032153;1allele=C/T;version=Hapmap2;RS=rs128650116;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	80882415	80882514	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:80055879;1allele=C/T;version=Hapmap2;RS=rs276281613;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	81155517	81155616	.	+	.	Name=Cob_diameter;B73v2_pos=1:80372409;1allele=C/T;version=Hapmap2;RS=rs830830903;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	81155529	81155628	.	+	.	Name=Cob_diameter;B73v2_pos=1:80372421;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	81756407	81756506	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:80963918;1allele=T/G;version=Hapmap2;RS=rs128651656;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	81814203	81814302	.	+	.	Name=Cob_diameter;B73v2_pos=1:81009236;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	81932268	81932367	.	+	.	Name=Protein;B73v2_pos=1:81135303;1allele=G/A;version=Hapmap2;RS=rs820760004;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	82007149	82007248	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:81211404;1allele=T/G;version=Hapmap1;RS=rs131269328;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	82007345	82007444	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:81211600;1allele=A/C;version=Hapmap1;RS=rs276282781;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	82007862	82007961	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:81212117;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	82008186	82008285	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:81212441;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	82301550	82301649	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:81507136;1allele=T/A;version=Hapmap2;RS=rs843860249;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	82342142	82342241	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:81547107;1allele=A/G;version=Hapmap2;RS=rs128652753;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	82371045	82371144	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:81574036;1allele=C/T;version=Hapmap2;RS=rs837448908;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	82755700	82755799	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:81942892;1allele=A/G;version=Hapmap2;RS=rs832553470;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	82837460	82837559	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:82023513;1allele=G/T;version=Hapmap2;RS=rs803792323;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	82851776	82851875	.	+	.	Name=Plant_height;B73v2_pos=1:82038248;1allele=A/G;version=Hapmap2;RS=rs804064380;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	82856589	82856688	.	+	.	Name=Height_above_ear;B73v2_pos=1:82043061;1allele=G/A;version=Hapmap2;RS=rs840600400;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	82869290	82869389	.	+	.	Name=Plant_height;B73v2_pos=1:82055762;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	82869290	82869389	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:82055762;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	82870642	82870741	.	+	.	Name=Plant_height;B73v2_pos=1:82057114;1allele=A/C;version=Hapmap2;RS=rs820048851;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	82971194	82971293	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:82155641;1allele=G/T;version=Hapmap2;RS=rs804089520;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	82997036	82997135	.	+	.	Name=Leaf_width;B73v2_pos=1:82185026;1allele=T/G;version=Hapmap2;RS=rs823740960;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	83337566	83337665	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:82510711;1allele=C/T;version=Hapmap2;RS=rs276283690;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	83697607	83697706	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:82861677;1allele=C/G;version=Hapmap2;RS=rs811102357;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	84214429	84214528	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:83369938;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	84223035	84223134	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:83377542;1allele=T/C;version=Hapmap2;RS=rs1062267336;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	84253241	84253340	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:83415030;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	84381918	84382017	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:83547727;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	84409313	84409412	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:83567446;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	84409366	84409465	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:83567393;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	84412003	84412102	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:83564756;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	84511430	84511529	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:83656848;1allele=A/G;version=Hapmap1;RS=rs131271026;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	84642214	84642313	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:83779603;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	84649201	84649300	.	+	.	Name=Leaf_length;B73v2_pos=1:83786590;1allele=C/T;version=Hapmap2;RS=rs276285330;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	84650108	84650207	.	+	.	Name=Leaf_length;B73v2_pos=1:83787495;1allele=T/G;version=Hapmap1;RS=rs131271076;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	84652279	84652378	.	+	.	Name=Plant_height;B73v2_pos=1:83789666;1allele=A/G;version=Hapmap2;RS=rs804706077;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	84687083	84687182	.	+	.	Name=Days_to_silk;B73v2_pos=1:83828527;1allele=T/C;version=Hapmap2;RS=rs801543259;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	84716482	84716581	.	+	.	Name=Days_to_silk;B73v2_pos=1:83857919;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85254097	85254196	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84359605;1allele=G/A;version=Hapmap2;RS=rs276286365;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85254097	85254196	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:84359605;1allele=G/A;version=Hapmap2;RS=rs276286365;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85273550	85273649	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:84379058;1allele=G/T;version=Hapmap2;RS=rs276286378;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	85280586	85280685	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:84386094;1allele=G/T;version=Hapmap2;RS=rs276286399;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	85308006	85308105	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84413515;1allele=G/T;version=Hapmap2;RS=rs128656854;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	85325874	85325973	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84431383;1allele=C/T;version=Hapmap2;RS=rs821224724;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85326495	85326594	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84432004;1allele=G/C;version=Hapmap2;RS=rs827513810;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	85327101	85327200	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84432610;1allele=C/T;version=Hapmap2;RS=rs819695950;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85329198	85329297	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84434707;1allele=C/T;version=Hapmap2;RS=rs128656946;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85384737	85384836	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:84483582;1allele=G/A;version=Hapmap2;RS=rs276286567;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	85406849	85406948	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84505695;1allele=G/A;version=Hapmap2;RS=rs1062452648;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	85407664	85407763	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:84506510;1allele=G/C;version=Hapmap2;RS=rs128657200;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	85418846	85418945	.	+	.	Name=Ear_height;B73v2_pos=1:84517692;1allele=A/G;version=Hapmap2;RS=rs276286686;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85419117	85419216	.	+	.	Name=Ear_height;B73v2_pos=1:84517963;1allele=T/C;version=Hapmap2;RS=rs849435784;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85445519	85445618	.	+	.	Name=Ear_height;B73v2_pos=1:84544366;1allele=A/G;version=Hapmap2;RS=rs801856742;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85504512	85504611	.	+	.	Name=Days_to_silk;B73v2_pos=1:84604253;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85529384	85529483	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:84676010;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85530102	85530201	.	+	.	Name=Days_to_silk;B73v2_pos=1:84675292;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85564390	85564489	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:84638189;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85568779	85568878	.	+	.	Name=Ear_height;B73v2_pos=1:84633800;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85569418	85569517	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84633161;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85569569	85569668	.	+	.	Name=Ear_height;B73v2_pos=1:84633010;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85569569	85569668	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:84633010;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85569569	85569668	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84633010;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85570850	85570949	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:84631729;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85580829	85580928	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84684969;1allele=G/A;version=Hapmap2;RS=rs832660730;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85580843	85580942	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84684983;1allele=G/A;version=Hapmap2;RS=rs810524315;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85580957	85581056	.	+	.	Name=Ear_height;B73v2_pos=1:84685097;1allele=T/G;version=Hapmap2;RS=rs810559377;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	85631670	85631769	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84736804;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85631670	85631769	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:84736804;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85631754	85631853	.	+	.	Name=Ear_height;B73v2_pos=1:84736888;1allele=C/G;version=Hapmap2;RS=rs810267743;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	85634768	85634867	.	+	.	Name=Protein;B73v2_pos=1:84739902;1allele=G/A;version=Hapmap2;RS=rs840787004;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85634936	85635035	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:84740070;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85636215	85636314	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:84741349;1allele=T/C;version=Hapmap1;RS=rs128657701;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	85636337	85636436	.	+	.	Name=Days_to_silk;B73v2_pos=1:84741471;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85636622	85636721	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:84741756;1allele=A/G;version=Hapmap2;RS=rs832325627;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85636622	85636721	.	+	.	Name=Days_to_silk;B73v2_pos=1:84741756;1allele=A/G;version=Hapmap2;RS=rs832325627;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85636761	85636860	.	+	.	Name=Days_to_silk;B73v2_pos=1:84741895;1allele=G/A;version=Hapmap2;RS=rs128657707;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	85637507	85637606	.	+	.	Name=Ear_height;B73v2_pos=1:84742641;1allele=A/T;version=Hapmap2;RS=rs843920748;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	85637507	85637606	.	+	.	Name=Days_to_silk;B73v2_pos=1:84742641;1allele=A/T;version=Hapmap2;RS=rs843920748;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	85638327	85638426	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:84743461;1allele=A/C;version=Hapmap2;RS=rs817636817;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85638820	85638919	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:84743954;1allele=C/T;version=Hapmap1;RS=rs128657730;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85639496	85639595	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:84744631;1allele=G/C;version=Hapmap1;RS=rs131271660;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	85639496	85639595	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84744631;1allele=G/C;version=Hapmap1;RS=rs131271660;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	85800771	85800870	.	+	.	Name=Days_to_silk;B73v2_pos=1:84905970;1allele=C/T;version=Hapmap2;RS=rs128658227;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	85817647	85817746	.	+	.	Name=Malate;B73v2_pos=1:84922899;1allele=G/A;version=Hapmap2;RS=rs128658303;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85879487	85879586	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:84985230;1allele=T/G;version=Hapmap2;RS=rs1063105030;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	85911283	85911382	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85017026;1allele=A/T;version=Hapmap1;RS=rs131271852;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	85911283	85911382	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:85017026;1allele=A/T;version=Hapmap1;RS=rs131271852;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	85911914	85912013	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85017657;1allele=T/C;version=Hapmap2;RS=rs128658533;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85912280	85912379	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:85017969;1allele=T/C;version=Hapmap1;RS=rs128658537;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	85912485	85912584	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85018174;1allele=T/C;version=Hapmap2;RS=rs840725339;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85912914	85913013	.	+	.	Name=Days_to_silk;B73v2_pos=1:85018603;1allele=C/T;version=Hapmap1;RS=rs131271887;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85914444	85914543	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85020133;1allele=G/C;version=Hapmap1;RS=rs131271901;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	85914444	85914543	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:85020133;1allele=G/C;version=Hapmap1;RS=rs131271901;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	85914892	85914991	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:85020581;1allele=C/T;version=Hapmap2;RS=rs824522709;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	85915679	85915778	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85021368;1allele=G/A;version=Hapmap2;RS=rs131271930;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	85916006	85916105	.	+	.	Name=Days_to_silk;B73v2_pos=1:85021695;1allele=G/A;version=Hapmap2;RS=rs831115924;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	85921648	85921747	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85027337;1allele=A/G;version=Hapmap2;RS=rs128658609;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	85925717	85925816	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85031406;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	85946835	85946934	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85052531;1allele=C/T;version=Hapmap2;RS=rs128658641;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	86118147	86118246	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85186835;1allele=G/A;version=Hapmap2;RS=rs834960320;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	86227909	86228008	.	+	.	Name=Protein;B73v2_pos=1:85291311;1allele=A/G;version=Hapmap2;RS=rs848600547;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	86238762	86238861	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85302167;1allele=A/G;version=Hapmap2;RS=rs725735157;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	86273027	86273126	.	+	.	Name=Protein;B73v2_pos=1:85335769;1allele=A/C;version=Hapmap2;RS=rs823228061;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	86279381	86279480	.	+	.	Name=Days_to_silk;B73v2_pos=1:85342125;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86335137	86335236	.	+	.	Name=Leaf_width;B73v2_pos=1:85393957;1allele=T/A;version=Hapmap2;RS=rs843396881;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	86494434	86494533	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85547169;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86494863	86494962	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:85547598;1allele=G/A;version=Hapmap2;RS=rs276288017;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	86496598	86496697	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85549333;1allele=G/A;version=Hapmap2;RS=rs128659403;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	86511105	86511204	.	+	.	Name=Ear_height;B73v2_pos=1:85563606;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86511105	86511204	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:85563606;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86546333	86546432	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85597105;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86592714	86592813	.	+	.	Name=Ear_height;B73v2_pos=1:85702431;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86633834	86633933	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:85690918;1allele=T/C;version=Hapmap2;RS=rs276288080;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	86641156	86641255	.	+	.	Name=Ear_height;B73v2_pos=1:85698240;1allele=T/A;version=Hapmap2;RS=rs806096532;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	86645581	86645680	.	+	.	Name=Ear_height;B73v2_pos=1:85702734;1allele=C/T;version=Hapmap2;RS=rs128659561;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	86660656	86660755	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85718505;1allele=G/A;version=Hapmap2;RS=rs128659625;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	86662671	86662770	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85720520;1allele=A/G;version=Hapmap2;RS=rs276288137;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	86718786	86718885	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85773941;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86775616	86775715	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85830968;1allele=G/A;version=Hapmap2;RS=rs276288283;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	86777557	86777656	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:85832909;1allele=C/G;version=Hapmap2;RS=rs131272394;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	86780093	86780192	.	+	.	Name=Ear_height;B73v2_pos=1:85835447;1allele=G/C;version=Hapmap2;RS=rs827692397;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	86795778	86795877	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:85849992;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	86978860	86978959	.	+	.	Name=Starch;B73v2_pos=1:85943238;1allele=C/T;version=Hapmap2;RS=rs128660158;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87211488	87211587	.	+	.	Name=Protein;B73v2_pos=1:86167014;1allele=C/T;version=Hapmap2;RS=rs843603667;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87212598	87212697	.	+	.	Name=Leaf_width;B73v2_pos=1:86168124;1allele=G/A;version=Hapmap2;RS=rs849960990;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87213330	87213429	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86168856;1allele=G/A;version=Hapmap2;RS=rs128660283;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	87213330	87213429	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:86168856;1allele=G/A;version=Hapmap2;RS=rs128660283;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	87213462	87213561	.	+	.	Name=Ear_height;B73v2_pos=1:86168988;1allele=G/A;version=Hapmap2;RS=rs128660284;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87213691	87213790	.	+	.	Name=Plant_height;B73v2_pos=1:86169217;1allele=T/C;version=Hapmap2;RS=rs276288558;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87213691	87213790	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:86169217;1allele=T/C;version=Hapmap2;RS=rs276288558;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87213692	87213791	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86169218;1allele=G/A;version=Hapmap2;RS=rs276288559;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	87214401	87214500	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86169927;1allele=C/A;version=Hapmap2;RS=rs128660301;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	87215630	87215729	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86171156;1allele=G/T;version=Hapmap2;RS=rs843523447;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	87215630	87215729	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:86171156;1allele=G/T;version=Hapmap2;RS=rs843523447;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	87215630	87215729	.	+	.	Name=Plant_height;B73v2_pos=1:86171156;1allele=G/T;version=Hapmap2;RS=rs843523447;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	87215669	87215768	.	+	.	Name=Ear_height;B73v2_pos=1:86171195;1allele=G/C;version=Hapmap2;RS=rs128660311;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	87215669	87215768	.	+	.	Name=Plant_height;B73v2_pos=1:86171195;1allele=G/C;version=Hapmap2;RS=rs128660311;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	87215998	87216097	.	+	.	Name=Ear_height;B73v2_pos=1:86171524;1allele=C/T;version=Hapmap2;RS=rs725348638;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87216605	87216704	.	+	.	Name=Plant_height;B73v2_pos=1:86172131;1allele=T/C;version=Hapmap2;RS=rs128660326;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87216803	87216902	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:86172329;1allele=G/A;version=Hapmap2;RS=rs276288588;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	87220923	87221022	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:86176449;1allele=A/G;version=Hapmap2;RS=rs1063236160;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87221398	87221497	.	+	.	Name=Plant_height;B73v2_pos=1:86176924;1allele=G/C;version=Hapmap2;RS=rs128660380;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	87283958	87284057	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86252023;1allele=C/T;version=Hapmap2;RS=rs128660458;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	87316769	87316868	.	+	.	Name=Ear_height;B73v2_pos=1:86276997;1allele=A/G;version=Hapmap1;RS=rs131272687;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	87316769	87316868	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:86276997;1allele=A/G;version=Hapmap1;RS=rs131272687;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	87339609	87339708	.	+	.	Name=Plant_height;B73v2_pos=1:86299836;1allele=C/T;version=Hapmap2;RS=rs128660577;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87339609	87339708	.	+	.	Name=Leaf_length;B73v2_pos=1:86299836;1allele=C/T;version=Hapmap2;RS=rs128660577;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87340532	87340631	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:86300756;1allele=T/C;version=Hapmap2;RS=rs838800989;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87340532	87340631	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:86300756;1allele=T/C;version=Hapmap2;RS=rs838800989;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87340532	87340631	.	+	.	Name=Ear_height;B73v2_pos=1:86300756;1allele=T/C;version=Hapmap2;RS=rs838800989;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87341680	87341778	.	+	.	Name=Leaf_length;B73v2_pos=1:86301905;1allele=A/G;version=Hapmap2;RS=rs276288874;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87373062	87373161	.	+	.	Name=Plant_height;B73v2_pos=1:86347659;1allele=T/C;version=Hapmap2;RS=rs276288894;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87373062	87373161	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86347659;1allele=T/C;version=Hapmap2;RS=rs276288894;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	87373418	87373517	.	+	.	Name=Days_to_silk;B73v2_pos=1:86348015;1allele=G/A;version=Hapmap2;RS=rs128660604;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	87384133	87384232	.	+	.	Name=Leaf_length;B73v2_pos=1:86358730;1allele=C/A;version=Hapmap2;RS=rs817429055;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	87384554	87384653	.	+	.	Name=Ear_height;B73v2_pos=1:86359151;1allele=C/T;version=Hapmap2;RS=rs128660618;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	87384861	87384960	.	+	.	Name=Leaf_length;B73v2_pos=1:86359458;1allele=C/G;version=Hapmap2;RS=rs128660621;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	87384900	87384999	.	+	.	Name=Leaf_length;B73v2_pos=1:86359497;1allele=A/C;version=Hapmap2;RS=rs826626227;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	87385606	87385705	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:86360203;1allele=T/A;version=Hapmap1;RS=rs131272703;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	87387021	87387120	.	+	.	Name=Days_to_silk;B73v2_pos=1:86361618;1allele=A/G;version=Hapmap2;RS=rs276288906;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87420447	87420546	.	+	.	Name=Days_to_silk;B73v2_pos=1:86390919;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	87484128	87484227	.	+	.	Name=Days_to_silk;B73v2_pos=1:86471189;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	87621731	87621830	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:86578893;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	87624223	87624322	.	+	.	Name=Starch;B73v2_pos=1:86581385;1allele=G/A;version=Hapmap2;RS=rs824562848;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87655545	87655644	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:86612614;1allele=T/C;version=Hapmap1;RS=rs131272844;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	87666256	87666355	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86623326;1allele=G/A;version=Hapmap2;RS=rs832596499;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87666354	87666453	.	+	.	Name=Leaf_length;B73v2_pos=1:86623424;1allele=T/C;version=Hapmap2;RS=rs845349785;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	87671407	87671506	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:86628477;1allele=C/T;version=Hapmap2;RS=rs128661174;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	87676087	87676186	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:86633159;1allele=C/T;version=Hapmap2;RS=rs1062050709;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	87723354	87723453	.	+	.	Name=Starch;B73v2_pos=1:86680433;1allele=A/G;version=Hapmap2;RS=rs813566527;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	87759589	87759688	.	+	.	Name=Starch;B73v2_pos=1:86716954;1allele=T/G;version=Hapmap2;RS=rs847694651;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	87813129	87813228	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:86770413;1allele=G/A;version=Hapmap2;RS=rs848705031;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87885738	87885837	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:86843038;1allele=A/G;version=Hapmap2;RS=rs276289478;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	87894995	87895094	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:86852194;1allele=G/T;version=Hapmap2;RS=rs276289544;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	87895017	87895116	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:86852216;1allele=G/T;version=Hapmap2;RS=rs128661449;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	88017436	88017535	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:86979786;1allele=G/A;version=Hapmap2;RS=rs1061190908;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	88044727	88044826	.	+	.	Name=Leaf_length;B73v2_pos=1:87007089;1allele=G/A;version=Hapmap2;RS=rs128661661;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	88080452	88080551	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:87088690;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	88186412	88186511	.	+	.	Name=Protein;B73v2_pos=1:87152178;1allele=G/A;version=Hapmap2;RS=rs846437536;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	88200620	88200719	.	+	.	Name=Protein;B73v2_pos=1:87166388;1allele=T/C;version=Hapmap2;RS=rs841622377;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	88201345	88201444	.	+	.	Name=Protein;B73v2_pos=1:87167113;1allele=G/A;version=Hapmap2;RS=rs844082132;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	88203549	88203648	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:87169317;1allele=G/A;version=Hapmap2;RS=rs823646658;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	88209786	88209885	.	+	.	Name=Ear_height;B73v2_pos=1:87175554;1allele=A/G;version=Hapmap2;RS=rs725871187;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	88345896	88345995	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:87296298;1allele=G/A;version=Hapmap2;RS=rs835427951;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	88346135	88346234	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:87296537;1allele=A/G;version=Hapmap2;RS=rs128661862;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	88350737	88350836	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:87301139;1allele=C/A;version=Hapmap2;RS=rs131273070;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	88554707	88554806	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87472756;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	88593264	88593363	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:87510806;1allele=C/G;version=Hapmap2;RS=rs276290223;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	88663351	88663450	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:87563854;1allele=A/G;version=Hapmap2;RS=rs128662192;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	88674661	88674760	.	+	.	Name=Days_to_silk;B73v2_pos=1:87575164;1allele=T/C;version=Hapmap2;RS=rs128662225;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	88674661	88674760	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:87575164;1allele=T/C;version=Hapmap2;RS=rs128662225;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	88742523	88742622	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87634438;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	88782394	88782493	.	+	.	Name=Leaf_length;B73v2_pos=1:87595430;1allele=T/C;version=Hapmap2;RS=rs806412826;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	88782439	88782538	.	+	.	Name=Leaf_length;B73v2_pos=1:87595385;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	88787549	88787648	.	+	.	Name=Days_to_silk;B73v2_pos=1:87728173;1allele=G/T;version=Hapmap2;RS=rs819826812;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	88831888	88831987	.	+	.	Name=Plant_height;B73v2_pos=1:87765347;1allele=C/T;version=Hapmap2;RS=rs803810255;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	88832718	88832817	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:87766177;1allele=G/T;version=Hapmap2;RS=rs128662434;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	88832960	88833059	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:87766419;1allele=T/C;version=Hapmap1;RS=rs128662435;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	89014784	89014883	.	+	.	Name=Protein;B73v2_pos=1:87879584;1allele=T/C;version=Hapmap2;RS=rs276290404;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	89115965	89116064	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87981400;1allele=C/T;version=Hapmap1;RS=rs128668809;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	89115998	89116097	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87981433;1allele=T/G;version=Hapmap2;RS=rs128668810;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	89116441	89116540	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87981876;1allele=G/A;version=Hapmap2;RS=rs128668815;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	89116441	89116540	.	+	.	Name=Ear_height;B73v2_pos=1:87981876;1allele=G/A;version=Hapmap2;RS=rs128668815;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	89116441	89116540	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:87981876;1allele=G/A;version=Hapmap2;RS=rs128668815;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	89116441	89116540	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:87981876;1allele=G/A;version=Hapmap2;RS=rs128668815;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	89116774	89116873	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:87982209;1allele=T/C;version=Hapmap2;RS=rs276290550;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	89116774	89116873	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:87982209;1allele=T/C;version=Hapmap2;RS=rs276290550;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	89116774	89116873	.	+	.	Name=Ear_height;B73v2_pos=1:87982209;1allele=T/C;version=Hapmap2;RS=rs276290550;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	89117111	89117210	.	+	.	Name=Ear_height;B73v2_pos=1:87982546;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	89117111	89117210	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87982546;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	89117251	89117350	.	+	.	Name=Ear_height;B73v2_pos=1:87982686;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	89117554	89117653	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87982989;1allele=T/C;version=Hapmap2;RS=rs276290554;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	89117762	89117861	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87983197;1allele=C/A;version=Hapmap1;RS=rs128668821;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	89117813	89117912	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:87983248;1allele=T/C;version=Hapmap1;RS=rs131275889;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	89117813	89117912	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:87983248;1allele=T/C;version=Hapmap1;RS=rs131275889;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	89333066	89333165	.	+	.	Name=Days_to_silk;B73v2_pos=1:88165677;1allele=A/T;version=Hapmap2;RS=rs845064102;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	89412354	89412453	.	+	.	Name=Height_above_ear;B73v2_pos=1:88241058;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	89443934	89444033	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:88281085;1allele=T/A;version=Hapmap2;RS=rs1063951560;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	89488852	89488951	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:88326006;1allele=C/T;version=Hapmap2;RS=rs807220891;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	89662727	89662826	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:88531586;1allele=A/G;version=Hapmap2;RS=rs841787430;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	89674676	89674775	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:88543535;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	89687882	89687981	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:88560345;1allele=G/A;version=Hapmap2;RS=rs837351483;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	89688350	89688449	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:88560813;1allele=T/C;version=Hapmap2;RS=rs128669708;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	89763532	89763631	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:88577571;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	89811638	89811737	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:88674233;1allele=C/A;version=Hapmap2;RS=rs830669786;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	89851544	89851643	.	+	.	Name=Starch;B73v2_pos=1:88711682;1allele=T/G;version=Hapmap2;RS=rs829759804;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	89886195	89886294	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:88748835;1allele=A/G;version=Hapmap2;RS=rs830486721;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	89961403	89961502	.	+	.	Name=Plant_height;B73v2_pos=1:88823465;1allele=G/A;version=Hapmap2;RS=rs804963976;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	89992455	89992554	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:88854837;1allele=C/T;version=Hapmap2;RS=rs276291590;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	90019951	90020050	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:88882975;1allele=C/T;version=Hapmap2;RS=rs128670203;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	90029224	90029323	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:88892248;1allele=A/G;version=Hapmap2;RS=rs724596842;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	90037086	90037185	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:88900110;1allele=T/C;version=Hapmap2;RS=rs1063680922;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	90042133	90042232	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:88905157;1allele=G/A;version=Hapmap2;RS=rs802646607;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	90086884	90086983	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:88952161;1allele=A/T;version=Hapmap2;RS=rs847342514;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	90093695	90093794	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:88958974;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90099509	90099608	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:88964788;1allele=G/A;version=Hapmap2;RS=rs128670519;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	90104604	90104703	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:88969883;1allele=C/T;version=Hapmap2;RS=rs846385858;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	90129731	90129830	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:88995011;1allele=T/C;version=Hapmap2;RS=rs276291914;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	90160807	90160906	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:89028846;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90172729	90172828	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:89040770;1allele=C/T;version=Hapmap2;RS=rs128670727;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	90183819	90183918	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:89051867;1allele=T/C;version=Hapmap2;RS=rs801440525;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	90197734	90197833	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:89065784;1allele=C/T;version=Hapmap2;RS=rs801802746;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	90199729	90199828	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89067779;1allele=A/T;version=Hapmap2;RS=rs825498011;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	90202768	90202867	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:89070820;1allele=C/T;version=Hapmap2;RS=rs827106562;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	90251357	90251456	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89119885;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90288843	90288942	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89259957;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90299107	90299206	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:89249693;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90303437	90303536	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89245363;1allele=A/G;version=Hapmap2;RS=rs845108519;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	90304324	90304423	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89244476;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90304583	90304682	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89244217;1allele=A/T;version=Hapmap2;RS=rs276292191;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	90304755	90304854	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89244045;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90305949	90306048	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:89242851;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90308951	90309050	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:89239849;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90310319	90310418	.	+	.	Name=Days_to_silk;B73v2_pos=1:89238481;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90312411	90312510	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:89236389;1allele=C/T;version=Hapmap1;RS=rs869412981;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	90365908	90366007	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:89181995;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90400015	90400114	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:89270370;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90401883	90401982	.	+	.	Name=Plant_height;B73v2_pos=1:89268497;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90401909	90402008	.	+	.	Name=Leaf_width;B73v2_pos=1:89268471;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90461917	90462016	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:89351065;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	90537453	90537552	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:89398814;1allele=C/A;version=Hapmap2;RS=rs813498663;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	91108275	91108374	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:89955031;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91151849	91151948	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:90106124;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91151849	91151948	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:90106124;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91152262	91152361	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:90105711;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91152262	91152361	.	+	.	Name=Leaf_length;B73v2_pos=1:90105711;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91152296	91152395	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:90105677;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91170832	91170931	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:90007381;1allele=T/C;version=Hapmap2;RS=rs823857315;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	91189131	91189230	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:90100149;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91193635	91193734	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:90095645;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91301566	91301665	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:90141802;1allele=C/T;version=Hapmap2;RS=rs814196185;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	91356921	91357020	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:90195659;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91373111	91373210	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:90211849;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91375951	91376050	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:90214692;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91382606	91382705	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:90221347;1allele=T/C;version=Hapmap2;RS=rs131277243;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	91386916	91387015	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:90225656;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91387024	91387123	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:90225764;1allele=T/A;version=Hapmap2;RS=rs128672073;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	91388113	91388212	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90226853;1allele=C/A;version=Hapmap2;RS=rs727422902;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	91422492	91422591	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:90261260;1allele=T/C;version=Hapmap2;RS=rs807009659;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	91461868	91461967	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90298398;1allele=G/A;version=Hapmap2;RS=rs845161919;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	91487005	91487104	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:90323677;1allele=G/C;version=Hapmap1;RS=rs838889006;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	91487170	91487269	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90323842;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91488060	91488159	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:90325557;1allele=A/G;version=Hapmap2;RS=rs276292994;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	91488060	91488159	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90325557;1allele=A/G;version=Hapmap2;RS=rs276292994;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	91491854	91491953	.	+	.	Name=Starch;B73v2_pos=1:90329351;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91520227	91520326	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:90357724;1allele=C/T;version=Hapmap2;RS=rs1063691113;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	91597717	91597816	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:90438589;1allele=C/T;version=Hapmap2;RS=rs812341312;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	91608635	91608734	.	+	.	Name=Leaf_width;B73v2_pos=1:90449507;1allele=A/G;version=Hapmap2;RS=rs833848647;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	91641497	91641596	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:90482147;1allele=G/A;version=Hapmap2;RS=rs128672670;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	91641497	91641596	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90482147;1allele=G/A;version=Hapmap2;RS=rs128672670;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	91749738	91749837	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90652127;1allele=T/C;version=Hapmap2;RS=rs1061299999;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	91804316	91804415	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90697395;1allele=G/T;version=Hapmap2;RS=rs848968890;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	91843318	91843417	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90741521;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91843318	91843417	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:90741521;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91850591	91850690	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90734247;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91855340	91855439	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90729428;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91858570	91858669	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:90726198;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	91864264	91864363	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:90760771;1allele=T/G;version=Hapmap2;RS=rs276294016;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	91867523	91867622	.	+	.	Name=Ear_height;B73v2_pos=1:90764030;1allele=C/A;version=Hapmap1;RS=rs131277427;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	91867523	91867622	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:90764030;1allele=C/A;version=Hapmap1;RS=rs131277427;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	91980788	91980887	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:90878005;1allele=G/A;version=Hapmap2;RS=rs816924604;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	91980990	91981089	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:90878207;1allele=G/A;version=Hapmap2;RS=rs826808938;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	91985319	91985418	.	+	.	Name=Starch;B73v2_pos=1:90882536;1allele=A/C;version=Hapmap2;RS=rs848935118;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	92148232	92148331	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:91045308;1allele=G/A;version=Hapmap1;RS=rs131277679;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	92294311	92294410	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:91189455;1allele=A/G;version=Hapmap2;RS=rs128673742;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	92466044	92466143	.	+	.	Name=Leaf_length;B73v2_pos=1:91362434;1allele=A/T;version=Hapmap2;RS=rs1061920286;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	92658027	92658126	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:91507437;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	92889415	92889514	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:91772166;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	92926423	92926522	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:91807086;1allele=A/G;version=Hapmap2;RS=rs128674874;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	92931154	92931253	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:91811817;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	92931167	92931266	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:91811830;1allele=G/A;version=Hapmap2;RS=rs837938720;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	92973924	92974023	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:91833836;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	92973938	92974037	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:91833822;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	92992825	92992924	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:91872343;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	93321770	93321869	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:92160294;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	93487261	93487360	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:92240042;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	93522248	93522347	.	+	.	Name=Leaf_length;B73v2_pos=1:92270156;1allele=G/A;version=Hapmap2;RS=rs847346034;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	93714589	93714688	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:92464163;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	93715001	93715100	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:92463751;1allele=+/-;version=Hapmap2;RS=rs276296157;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	93899203	93899302	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:92621317;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	93899203	93899302	.	+	.	Name=Leaf_length;B73v2_pos=1:92621317;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	93990778	93990877	.	+	.	Name=Leaf_length;B73v2_pos=1:92712739;1allele=T/C;version=Hapmap2;RS=rs1064227357;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	94054241	94054340	.	+	.	Name=Plant_height;B73v2_pos=1:92815326;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	94082121	94082220	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:92786259;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	94157499	94157598	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:92876108;1allele=G/C;version=Hapmap2;RS=rs843738877;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	94175821	94175920	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:92894430;1allele=C/T;version=Hapmap2;RS=rs128664059;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	94188186	94188285	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:92906798;1allele=A/G;version=Hapmap2;RS=rs1061999596;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	94453756	94453855	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:93166245;1allele=G/A;version=Hapmap2;RS=rs1063469195;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	94583849	94583948	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:93291650;1allele=T/C;version=Hapmap2;RS=rs808359529;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	94801653	94801752	.	+	.	Name=Leaf_length;B73v2_pos=1:93512263;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	94805675	94805774	.	+	.	Name=Leaf_length;B73v2_pos=1:93516285;1allele=C/T;version=Hapmap2;RS=rs1062694636;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	94815432	94815531	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:93526042;1allele=C/A;version=Hapmap2;RS=rs727178815;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	94918721	94918819	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:93619592;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	94920923	94921022	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:93621801;1allele=A/G;version=Hapmap2;RS=rs834132372;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	94992278	94992377	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:93688634;1allele=T/C;version=Hapmap2;RS=rs815272554;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	95131613	95131712	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:93827483;1allele=C/T;version=Hapmap2;RS=rs1063647392;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	95229955	95230054	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:93915229;1allele=C/G;version=Hapmap2;RS=rs848475383;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	95231506	95231605	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:93916780;1allele=C/T;version=Hapmap2;RS=rs813893228;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	95232841	95232940	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:93918116;1allele=G/A;version=Hapmap2;RS=rs725723665;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	95233311	95233410	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:93918586;1allele=T/C;version=Hapmap2;RS=rs276298046;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	95246759	95246858	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:93932033;1allele=A/G;version=Hapmap2;RS=rs128665838;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	95247124	95247223	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:93932398;1allele=G/A;version=Hapmap2;RS=rs1061030601;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	95253756	95253855	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:93939030;1allele=T/G;version=Hapmap2;RS=rs843908898;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	95257595	95257694	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:93942869;1allele=C/G;version=Hapmap2;RS=rs825555532;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	95271386	95271485	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:93956661;1allele=C/T;version=Hapmap2;RS=rs806774806;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	95271391	95271490	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:93956666;1allele=T/C;version=Hapmap2;RS=rs847882873;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	95271857	95271956	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:93957132;1allele=A/T;version=Hapmap2;RS=rs128665677;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	95279206	95279305	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:93964481;1allele=C/T;version=Hapmap2;RS=rs804488139;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	95280170	95280269	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:93965445;1allele=T/A;version=Hapmap2;RS=rs829868103;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	95281033	95281132	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:93966308;1allele=C/T;version=Hapmap2;RS=rs128665617;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	95282545	95282644	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:93967820;1allele=A/G;version=Hapmap2;RS=rs818724869;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	95288114	95288213	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:93973388;1allele=C/A;version=Hapmap2;RS=rs831718167;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	95338766	95338865	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:94014072;1allele=C/T;version=Hapmap2;RS=rs803041781;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	95395748	95395847	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:94069596;1allele=T/C;version=Hapmap2;RS=rs830825835;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	95420006	95420105	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:94093450;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	95464529	95464628	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:94137974;1allele=A/G;version=Hapmap2;RS=rs837621208;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	95477262	95477361	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:94150676;1allele=C/T;version=Hapmap2;RS=rs830702902;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	95477365	95477464	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:94150779;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	95479871	95479970	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:94153285;1allele=G/T;version=Hapmap2;RS=rs128666216;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	95947133	95947232	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:94580199;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	96167435	96167534	.	+	.	Name=Ear_height;B73v2_pos=1:94817867;1allele=/GGCGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	96167435	96167534	.	+	.	Name=Plant_height;B73v2_pos=1:94817867;1allele=/GGCGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	96168178	96168277	.	+	.	Name=Leaf_length;B73v2_pos=1:94818610;1allele=TAGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	96168539	96168638	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:94818971;1allele=T/C;version=Hapmap1;RS=rs131275117;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	96177264	96177363	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:94827696;1allele=C/T;version=Hapmap2;RS=rs840750492;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	96184310	96184409	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:94834742;1allele=C/G;version=Hapmap2;RS=rs128666922;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	96225514	96225613	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:94876782;1allele=G/C;version=Hapmap2;RS=rs276298833;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	96335235	96335334	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:94986109;1allele=T/C;version=Hapmap2;RS=rs724276888;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	96335236	96335335	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:94986110;1allele=C/T;version=Hapmap2;RS=rs834401521;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	96469872	96469971	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:95118734;1allele=C/T;version=Hapmap2;RS=rs802697559;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	96488461	96488560	.	+	.	Name=Days_to_silk;B73v2_pos=1:95137324;1allele=A/T;version=Hapmap2;RS=rs837297876;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	96498023	96498122	.	+	.	Name=Days_to_silk;B73v2_pos=1:95146586;1allele=A/G;version=Hapmap2;RS=rs818458386;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	96657624	96657723	.	+	.	Name=Leaf_length;B73v2_pos=1:95307611;1allele=T/G;version=Hapmap1;RS=rs131275587;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	96818066	96818165	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:95474473;1allele=G/A;version=Hapmap2;RS=rs1064251641;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	96979851	96979950	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:95626356;1allele=C/G;version=Hapmap2;RS=rs838645328;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	96992187	96992253	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:95638692;1allele=G/A;version=Hapmap2;RS=rs828152351;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	97453874	97453973	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:96072222;1allele=T/C;version=Hapmap2;RS=rs726397942;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	97464127	97464226	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:96082476;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	97481264	97481363	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:96099044;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	97511929	97512028	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:96123572;1allele=C/A;version=Hapmap2;RS=rs128675518;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	97663407	97663506	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:96272344;1allele=G/A;version=Hapmap2;RS=rs828134071;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	97704842	97704941	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:96313830;1allele=C/G;version=Hapmap2;RS=rs131278672;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	97704842	97704941	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:96313830;1allele=C/G;version=Hapmap2;RS=rs131278672;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	97704842	97704941	.	+	.	Name=Plant_height;B73v2_pos=1:96313830;1allele=C/G;version=Hapmap2;RS=rs131278672;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	97850960	97851059	.	+	.	Name=Height_above_ear;B73v2_pos=1:96442632;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	97868883	97868982	.	+	.	Name=Leaf_length;B73v2_pos=1:96452807;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	97895072	97895171	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:96498858;1allele=A/G;version=Hapmap2;RS=rs809882907;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	97906535	97906634	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:96555737;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	98000322	98000421	.	+	.	Name=Starch;B73v2_pos=1:96601458;1allele=A/C;version=Hapmap2;RS=rs815533673;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	98065284	98065383	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:96665644;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	98192786	98192885	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:96799821;1allele=G/A;version=Hapmap2;RS=rs128676684;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	98194161	98194260	.	+	.	Name=Leaf_length;B73v2_pos=1:96801196;1allele=C/G;version=Hapmap2;RS=rs128676701;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	98204981	98205080	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:96812014;1allele=A/G;version=Hapmap2;RS=rs128676776;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	98275092	98275191	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:96883465;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	98302019	98302118	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:96911782;1allele=G/A;version=Hapmap2;RS=rs827078325;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	98558565	98558664	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:97172895;1allele=G/A;version=Hapmap2;RS=rs831386133;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	98587068	98587167	.	+	.	Name=Leaf_length;B73v2_pos=1:97201399;1allele=A/G;version=Hapmap2;RS=rs813209804;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	98673628	98673727	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:97293692;1allele=T/C;version=Hapmap2;RS=rs128677726;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	98967896	98967995	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:97583276;1allele=A/T;version=Hapmap2;RS=rs843522748;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	99009820	99009919	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:97615838;1allele=C/T;version=Hapmap2;RS=rs842957986;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	99282035	99282134	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:97898427;1allele=T/C;version=Hapmap2;RS=rs1061841280;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	99312813	99312912	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:97850636;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	99330887	99330986	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:97873330;1allele=A/T;version=Hapmap2;RS=rs835767242;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	99332379	99332478	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:97874822;1allele=A/C;version=Hapmap2;RS=rs847292570;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	99332520	99332619	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:97874963;1allele=T/C;version=Hapmap2;RS=rs276301999;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	99333754	99333853	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:97876197;1allele=T/C;version=Hapmap2;RS=rs844305628;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	99335097	99335196	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:97877540;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	99337123	99337222	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:97879566;1allele=C/T;version=Hapmap2;RS=rs841932598;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	99398305	99398404	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:98003957;1allele=C/A;version=Hapmap2;RS=rs1061074943;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	99632857	99632956	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:98227586;1allele=G/C;version=Hapmap2;RS=rs724191390;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	99694105	99694204	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:98284090;1allele=C/T;version=Hapmap2;RS=rs821732846;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	99822938	99823037	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:98419107;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	99879668	99879767	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:98472122;1allele=G/A;version=Hapmap2;RS=rs128679814;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	100006344	100006443	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:98556328;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	100035064	100035163	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:98611313;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	100066797	100066896	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:98643416;1allele=A/G;version=Hapmap2;RS=rs128680287;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	100469711	100469810	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:99039667;1allele=T/C;version=Hapmap2;RS=rs726556726;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	101656217	101656316	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:100193033;1allele=C/A;version=Hapmap2;RS=rs839162585;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	102453464	102453563	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:100991392;1allele=G/A;version=Hapmap2;RS=rs276304502;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	102602657	102602756	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:101141707;1allele=G/A;version=Hapmap2;RS=rs834399338;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	102670710	102670809	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:101211928;1allele=A/G;version=Hapmap2;RS=rs831177415;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	102779144	102779243	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:101320371;1allele=G/A;version=Hapmap2;RS=rs1063014877;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	102796368	102796467	.	+	.	Name=Leaf_length;B73v2_pos=1:101337602;1allele=A/G;version=Hapmap2;RS=rs276305045;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	102841138	102841237	.	+	.	Name=Leaf_length;B73v2_pos=1:101382378;1allele=T/C;version=Hapmap2;RS=rs131788884;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	104069356	104069455	.	+	.	Name=Leaf_length;B73v2_pos=1:102386704;1allele=G/A;version=Hapmap2;RS=rs825398764;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	104211192	104211291	.	+	.	Name=Leaf_length;B73v2_pos=1:102529180;1allele=C/T;version=Hapmap2;RS=rs802519230;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	104263158	104263257	.	+	.	Name=Leaf_length;B73v2_pos=1:102581148;1allele=G/A;version=Hapmap2;RS=rs128687132;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	104579689	104579788	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:102894482;1allele=T/G;version=Hapmap2;RS=rs803915173;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	104587763	104587862	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:102902556;1allele=C/T;version=Hapmap2;RS=rs802792558;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	104615835	104615934	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:102931025;1allele=C/T;version=Hapmap2;RS=rs128687540;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	104749194	104749293	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:103067413;1allele=T/C;version=Hapmap2;RS=rs837323394;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	104759624	104759723	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:103078129;1allele=G/A;version=Hapmap2;RS=rs840737803;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	104780004	104780103	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:103098524;1allele=C/A;version=Hapmap2;RS=rs276307636;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	104852415	104852514	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:103160301;1allele=T/C;version=Hapmap2;RS=rs836990558;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	104856079	104856178	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:103163965;1allele=T/C;version=Hapmap2;RS=rs833956463;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	104951978	104952077	.	+	.	Name=Leaf_length;B73v2_pos=1:103319633;1allele=T/C;version=Hapmap2;RS=rs1063066561;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	105056746	105056845	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:103422425;1allele=G/A;version=Hapmap2;RS=rs725706076;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	105099625	105099724	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:103459075;1allele=C/T;version=Hapmap2;RS=rs128688980;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	105322317	105322416	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:103669245;1allele=G/T;version=Hapmap2;RS=rs1061574961;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	105335706	105335805	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:103682634;1allele=C/T;version=Hapmap2;RS=rs726831736;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	105723762	105723861	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:104095396;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	105750212	105750311	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:104111190;1allele=C/T;version=Hapmap2;RS=rs836745995;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	106036188	106036287	.	+	.	Name=Leaf_width;B73v2_pos=1:104382493;1allele=A/G;version=Hapmap2;RS=rs819973197;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	106257740	106257839	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:104604705;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	106314782	106314881	.	+	.	Name=Leaf_width;B73v2_pos=1:104708770;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	106589728	106589827	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:104983569;1allele=G/A;version=Hapmap2;RS=rs276309977;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	106598161	106598260	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:104991866;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	106758087	106758186	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:105146257;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	107013188	107013287	.	+	.	Name=Leaf_width;B73v2_pos=1:105398055;1allele=A/G;version=Hapmap2;RS=rs814510767;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	107078111	107078210	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:105464073;1allele=C/G;version=Hapmap2;RS=rs128692816;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	107084708	107084807	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:105470670;1allele=T/A;version=Hapmap2;RS=rs806309967;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	107369193	107369292	.	+	.	Name=Leaf_length;B73v2_pos=1:105766261;1allele=T/A;version=Hapmap2;RS=rs131790592;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	107370345	107370444	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:105767413;1allele=G/T;version=Hapmap2;RS=rs131790565;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	107506100	107506199	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:105819025;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	107542842	107542941	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:105929621;1allele=T/C;version=Hapmap2;RS=rs833818702;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	107544878	107544977	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:105931658;1allele=G/A;version=Hapmap2;RS=rs727385567;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	107562908	107563007	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:105950077;1allele=C/T;version=Hapmap2;RS=rs819873726;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	107580415	107580514	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:105967570;1allele=T/C;version=Hapmap2;RS=rs845711577;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	107871009	107871108	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:106230841;1allele=G/T;version=Hapmap2;RS=rs128694300;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	108614523	108614622	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:106992265;1allele=G/A;version=Hapmap2;RS=rs844824465;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	108826362	108826461	.	+	.	Name=Height_above_ear;B73v2_pos=1:107188709;1allele=G/T;version=Hapmap2;RS=rs131791259;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	108832130	108832229	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:107194421;1allele=T/G;version=Hapmap2;RS=rs817407048;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	108832130	108832229	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:107194421;1allele=T/G;version=Hapmap2;RS=rs817407048;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	108890697	108890796	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:107251863;1allele=G/A;version=Hapmap2;RS=rs818195656;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	108904187	108904286	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:107265353;1allele=G/A;version=Hapmap2;RS=rs131791291;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	108951472	108951571	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:107312542;1allele=A/C;version=Hapmap2;RS=rs128696354;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	109594903	109595002	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:108019006;1allele=T/C;version=Hapmap2;RS=rs724657104;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	109987895	109987994	.	+	.	Name=Leaf_width;B73v2_pos=1:108372134;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	110071953	110072052	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:108483691;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	110194131	110194230	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:108606220;1allele=G/T;version=Hapmap2;RS=rs809036075;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	110217305	110217404	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:108629398;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	110443713	110443812	.	+	.	Name=Leaf_width;B73v2_pos=1:108835235;1allele=A/G;version=Hapmap2;RS=rs836981695;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	110612515	110612614	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:108997429;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	110638635	110638734	.	+	.	Name=Leaf_width;B73v2_pos=1:109013284;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	110664033	110664132	.	+	.	Name=Leaf_length;B73v2_pos=1:109055541;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	110891263	110891362	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:109278873;1allele=C/G;version=Hapmap2;RS=rs821923644;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	110897452	110897551	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:109285064;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	110929170	110929269	.	+	.	Name=Leaf_width;B73v2_pos=1:109316834;1allele=C/T;version=Hapmap2;RS=rs809020108;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	111052155	111052254	.	+	.	Name=Leaf_width;B73v2_pos=1:109435893;1allele=C/T;version=Hapmap2;RS=rs724568060;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	111083276	111083375	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:109467016;1allele=G/T;version=Hapmap2;RS=rs826794153;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	111242434	111242533	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:109622116;1allele=G/A;version=Hapmap2;RS=rs1060865441;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	111579930	111580029	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:109951026;1allele=C/A;version=Hapmap2;RS=rs849062774;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	112121077	112121176	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:110504916;1allele=G/A;version=Hapmap2;RS=rs833185747;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	112390405	112390504	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:110774885;1allele=T/A;version=Hapmap2;RS=rs844917906;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	112509742	112509841	.	+	.	Name=Leaf_length;B73v2_pos=1:110894018;1allele=C/T;version=Hapmap2;RS=rs811764587;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	112565976	112566075	.	+	.	Name=Leaf_width;B73v2_pos=1:110949387;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	112845334	112845433	.	+	.	Name=Leaf_width;B73v2_pos=1:111226504;1allele=C/T;version=Hapmap2;RS=rs128706004;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	113885945	113886044	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:112247786;1allele=T/C;version=Hapmap2;RS=rs128708091;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	114067768	114067867	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:112450922;1allele=T/A;version=Hapmap2;RS=rs827512328;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	114434279	114434378	.	+	.	Name=Leaf_width;B73v2_pos=1:112803514;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	114821965	114822064	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173721647;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	114869350	114869449	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173683423;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	115394336	115394435	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:113745974;1allele=C/T;version=Hapmap2;RS=rs128710486;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	115407275	115407374	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:113758913;1allele=G/A;version=Hapmap2;RS=rs128710595;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	115500357	115500456	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:113803737;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	115504318	115504417	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:113799776;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	115517813	115517912	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:113870745;1allele=C/T;version=Hapmap2;RS=rs802790094;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	115536296	115536395	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:113889175;1allele=G/A;version=Hapmap2;RS=rs131793521;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	115682417	115682516	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:114060254;1allele=G/T;version=Hapmap2;RS=rs813197271;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	115929876	115929975	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:114298971;1allele=T/C;version=Hapmap2;RS=rs805453763;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	115929876	115929975	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:114298971;1allele=T/C;version=Hapmap2;RS=rs805453763;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	116023241	116023339	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:114361515;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	116390576	116390675	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:114747384;1allele=T/C;version=Hapmap2;RS=rs832457747;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	116435086	116435185	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:114800582;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	116514861	116514960	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:114865035;1allele=C/T;version=Hapmap2;RS=rs843185221;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	116525597	116525696	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:114875771;1allele=C/T;version=Hapmap2;RS=rs841062924;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	116528944	116529043	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:114879118;1allele=A/G;version=Hapmap2;RS=rs1062166339;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	116652010	116652109	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:115077959;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	116968664	116968763	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:115312025;1allele=A/T;version=Hapmap2;RS=rs128715233;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	116995295	116995394	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:115339053;1allele=C/G;version=Hapmap1;RS=rs131793923;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	117177716	117177815	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:115515488;1allele=C/A;version=Hapmap2;RS=rs810249165;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	117682499	117682598	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:116015001;1allele=C/A;version=Hapmap2;RS=rs801749773;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	117719292	117719391	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:116051397;1allele=T/A;version=Hapmap2;RS=rs725475366;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	118543803	118543902	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:116834468;1allele=C/T;version=Hapmap2;RS=rs276328403;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	119275838	119275937	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:117518100;1allele=G/T;version=Hapmap2;RS=rs840671751;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	119376137	119376236	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:117616139;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	119535170	119535269	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:117748552;1allele=G/A;version=Hapmap2;RS=rs724421831;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	120142206	120142305	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:118346124;1allele=C/A;version=Hapmap2;RS=rs1061107287;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	120192298	120192397	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:118399619;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	120245977	120246076	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:118445977;1allele=G/A;version=Hapmap2;RS=rs801699407;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	120306640	120306739	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:118506934;1allele=T/C;version=Hapmap2;RS=rs128722786;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	120332975	120333074	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:118533276;1allele=T/C;version=Hapmap2;RS=rs726202551;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	120419184	120419283	.	+	.	Name=Leaf_width;B73v2_pos=1:118622993;1allele=A/G;version=Hapmap2;RS=rs1063358007;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	120421350	120421449	.	+	.	Name=Leaf_width;B73v2_pos=1:118625159;1allele=T/C;version=Hapmap2;RS=rs276330650;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	120760098	120760197	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:118965345;1allele=A/G;version=Hapmap2;RS=rs1060943568;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	120803013	120803112	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:119007205;1allele=C/T;version=Hapmap2;RS=rs724424229;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	122140177	122140276	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:120296667;1allele=A/G;version=Hapmap2;RS=rs819456210;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	122570001	122570100	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:120712757;1allele=G/A;version=Hapmap2;RS=rs848427733;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	122733068	122733167	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:120877902;1allele=G/C;version=Hapmap2;RS=rs816181031;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	123080507	123080606	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:121212463;1allele=T/C;version=Hapmap2;RS=rs725229844;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	123098122	123098221	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:121230080;1allele=C/T;version=Hapmap2;RS=rs801783575;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	123140454	123140553	.	+	.	Name=Leaf_width;B73v2_pos=1:121271862;1allele=G/T;version=Hapmap2;RS=rs835611633;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	123775139	123775238	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:121885485;1allele=A/G;version=Hapmap2;RS=rs816384002;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	124149737	124149836	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:122238052;1allele=C/T;version=Hapmap2;RS=rs804109509;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	124149737	124149836	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:122238052;1allele=C/T;version=Hapmap2;RS=rs804109509;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	124218902	124219001	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:122307212;1allele=A/G;version=Hapmap2;RS=rs839166908;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	124251806	124251905	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:122331167;1allele=C/T;version=Hapmap2;RS=rs819484431;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	124576461	124576560	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:122665323;1allele=T/C;version=Hapmap2;RS=rs826648129;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	124834731	124834830	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:122877681;1allele=G/T;version=Hapmap2;RS=rs725925369;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	125103751	125103850	.	+	.	Name=Leaf_width;B73v2_pos=1:123199785;1allele=G/T;version=Hapmap2;RS=rs846739306;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	125243112	125243211	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:123339135;1allele=C/T;version=Hapmap2;RS=rs128732631;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	125292421	125292520	.	+	.	Name=Leaf_width;B73v2_pos=1:123371738;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	125606958	125607057	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:123695686;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	125750907	125751006	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:123860033;1allele=C/T;version=Hapmap2;RS=rs845396683;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	125800391	125800490	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:123912772;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	125848372	125848471	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:123950269;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	125953878	125953977	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:124064601;1allele=C/T;version=Hapmap2;RS=rs818411962;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	126191377	126191476	.	+	.	Name=Leaf_width;B73v2_pos=1:124273385;1allele=A/G;version=Hapmap2;RS=rs806926245;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	126401508	126401607	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:124507548;1allele=G/A;version=Hapmap2;RS=rs834772577;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	126636507	126636606	.	+	.	Name=Tassel_length;B73v2_pos=1:124740666;1allele=T/C;version=Hapmap2;RS=rs128737124;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	131681903	131682002	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:129518465;1allele=G/A;version=Hapmap2;RS=rs813826978;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	131777344	131777443	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:129610566;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	142706943	142707042	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:139153445;1allele=G/T;version=Hapmap2;RS=rs835476687;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	142852848	142852947	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:139315359;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	143851499	143851598	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:140308992;1allele=G/A;version=Hapmap2;RS=rs726751965;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	144517648	144517747	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:140985105;1allele=C/T;version=Hapmap2;RS=rs725058002;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	144740407	144740506	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:141223331;1allele=A/C;version=Hapmap2;RS=rs807545772;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	144931068	144931167	.	+	.	Name=Leaf_width;B73v2_pos=1:141415188;1allele=A/G;version=Hapmap2;RS=rs727141863;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	145602605	145602704	.	+	.	Name=Leaf_width;B73v2_pos=1:142094535;1allele=G/A;version=Hapmap2;RS=rs817211200;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	147561403	147561502	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:144117116;1allele=G/A;version=Hapmap2;RS=rs804054186;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	149723667	149723766	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:146230429;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	149884194	149884293	.	+	.	Name=Leaf_width;B73v2_pos=1:146398156;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	149969570	149969669	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:146483543;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	151098016	151098115	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:147569611;1allele=T/G;version=Hapmap2;RS=rs801778326;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	152180843	152180942	.	+	.	Name=Leaf_width;B73v2_pos=1:148459241;1allele=C/T;version=Hapmap2;RS=rs276364185;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	152181567	152181666	.	+	.	Name=Leaf_width;B73v2_pos=1:148459965;1allele=C/G;version=Hapmap2;RS=rs849562731;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	152214449	152214548	.	+	.	Name=Leaf_length;B73v2_pos=1:148486301;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	152295797	152295895	.	+	.	Name=Leaf_width;B73v2_pos=1:148555209;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	152501433	152501532	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:148759819;1allele=C/T;version=Hapmap2;RS=rs830869819;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	152526720	152526819	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:148785111;1allele=T/C;version=Hapmap2;RS=rs834633484;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	152824705	152824804	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:149082680;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	153933501	153933600	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:150175790;1allele=C/T;version=Hapmap2;RS=rs844103931;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	154539948	154540047	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:150766420;1allele=G/C;version=Hapmap2;RS=rs128770420;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	154622291	154622390	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:150861782;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	154697913	154698012	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:150933566;1allele=T/A;version=Hapmap2;RS=rs816744766;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	154821213	154821312	.	+	.	Name=Leaf_width;B73v2_pos=1:151043692;1allele=G/T;version=Hapmap2;RS=rs848840166;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	154822302	154822401	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:151044781;1allele=T/C;version=Hapmap2;RS=rs726086544;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	155463658	155463757	.	+	.	Name=Ear_row_number;B73v2_pos=1:151674883;1allele=T/A;version=Hapmap2;RS=rs846774891;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	155910301	155910400	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:152121387;1allele=C/T;version=Hapmap2;RS=rs816231610;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	155939224	155939323	.	+	.	Name=Leaf_width;B73v2_pos=1:152150310;1allele=G/A;version=Hapmap2;RS=rs726329726;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	155942318	155942417	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:152153165;1allele=C/T;version=Hapmap2;RS=rs841828229;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	156960435	156960534	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:153304902;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	157105140	157105239	.	+	.	Name=Leaf_length;B73v2_pos=1:153450762;1allele=T/C;version=Hapmap2;RS=rs823353660;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	157969208	157969307	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:154279725;1allele=G/A;version=Hapmap2;RS=rs846714332;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	158170546	158170645	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:154477878;1allele=C/T;version=Hapmap2;RS=rs276371256;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	159121594	159121693	.	+	.	Name=Leaf_width;B73v2_pos=1:155452368;1allele=G/A;version=Hapmap2;RS=rs809105704;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	159128774	159128873	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:155459487;1allele=+/-;version=Hapmap2;RS=rs809830486;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	159130463	159130562	.	+	.	Name=Leaf_width;B73v2_pos=1:155461176;1allele=A/T;version=Hapmap2;RS=rs822505947;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	159173922	159174021	.	+	.	Name=Leaf_width;B73v2_pos=1:155506043;1allele=A/G;version=Hapmap2;RS=rs845592009;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	159178010	159178109	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:155510131;1allele=A/G;version=Hapmap2;RS=rs276372474;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	159199151	159199250	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:155528828;1allele=A/T;version=Hapmap2;RS=rs1060805167;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	159295059	159295158	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:155625687;1allele=G/A;version=Hapmap2;RS=rs128776633;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	159422367	159422466	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:155753097;1allele=G/C;version=Hapmap2;RS=rs847726205;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	159516418	159516517	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:155867187;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	159700718	159700817	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:156051159;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	159837793	159837892	.	+	.	Name=Protein;B73v2_pos=1:156186134;1allele=A/T;version=Hapmap2;RS=rs825837921;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	159837976	159838075	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:156186317;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	159938169	159938268	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:156290857;1allele=G/T;version=Hapmap2;RS=rs128778134;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	160838055	160838154	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:157198057;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	161671019	161671118	.	+	.	Name=Leaf_length;B73v2_pos=1:157999927;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	162169964	162170063	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:158482373;1allele=A/G;version=Hapmap2;RS=rs810455676;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	162727728	162727827	.	+	.	Name=Leaf_width;B73v2_pos=1:159026988;1allele=A/G;version=Hapmap2;RS=rs819383599;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	162995815	162995914	.	+	.	Name=Leaf_width;B73v2_pos=1:159314415;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	163671309	163671408	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:159975928;1allele=G/A;version=Hapmap2;RS=rs838736754;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	163671309	163671408	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:159975928;1allele=G/A;version=Hapmap2;RS=rs838736754;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	163700834	163700933	.	+	.	Name=Leaf_length;B73v2_pos=1:160005453;1allele=G/C;version=Hapmap2;RS=rs128785082;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	163706021	163706120	.	+	.	Name=Ear_height;B73v2_pos=1:160010640;1allele=C/A;version=Hapmap2;RS=rs276377952;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	163728955	163729054	.	+	.	Name=Leaf_length;B73v2_pos=1:160033583;1allele=C/T;version=Hapmap2;RS=rs826991549;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	163732944	163733043	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:160037572;1allele=G/A;version=Hapmap2;RS=rs828919331;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	163732944	163733043	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:160037572;1allele=G/A;version=Hapmap2;RS=rs828919331;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	163769963	163770062	.	+	.	Name=Leaf_width;B73v2_pos=1:160073393;1allele=A/G;version=Hapmap2;RS=rs276378088;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	163793599	163793698	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:160167860;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	163953229	163953328	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:160256972;1allele=C/T;version=Hapmap2;RS=rs845745587;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	164032005	164032104	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:160336367;1allele=G/A;version=Hapmap2;RS=rs725134547;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	164266371	164266470	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:160565207;1allele=G/A;version=Hapmap2;RS=rs128785992;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	164333243	164333342	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:160631298;1allele=T/A;version=Hapmap2;RS=rs842664894;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	164421759	164421858	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:160715732;1allele=C/T;version=Hapmap2;RS=rs840573602;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	164472626	164472725	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:160764994;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	164554839	164554938	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:160851170;1allele=G/A;version=Hapmap2;RS=rs813276915;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	164594792	164594891	.	+	.	Name=Glucose;B73v2_pos=1:160890937;1allele=A/G;version=Hapmap2;RS=rs276379426;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	164707569	164707668	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:160995971;1allele=C/T;version=Hapmap2;RS=rs813699094;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	164711023	164711122	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:160999426;1allele=T/G;version=Hapmap2;RS=rs848170278;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	164736785	164736884	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:161025196;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	164770639	164770738	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:161061250;1allele=G/A;version=Hapmap2;RS=rs836801957;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	165421264	165421363	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:161614352;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	165421843	165421942	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:161613773;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	165426313	165426412	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:161680668;1allele=C/T;version=Hapmap2;RS=rs838962057;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	165506791	165506890	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:161711545;1allele=A/G;version=Hapmap2;RS=rs838605574;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	166295047	166295146	.	+	.	Name=Leaf_width;B73v2_pos=1:162422959;1allele=C/T;version=Hapmap2;RS=rs128789505;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	166295876	166295975	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:162423788;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	166297417	166297516	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:162425339;1allele=T/C;version=Hapmap2;RS=rs128789517;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	166339564	166339663	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:162466190;1allele=T/G;version=Hapmap2;RS=rs131810744;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	166340808	166340907	.	+	.	Name=Glutamate;B73v2_pos=1:162467434;1allele=C/T;version=Hapmap2;RS=rs276382590;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	166441638	166441737	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:162567530;1allele=C/G;version=Hapmap2;RS=rs839140269;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	166478110	166478208	.	+	.	Name=Ear_row_number;B73v2_pos=1:162604099;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	167401498	167401597	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:163515326;1allele=G/A;version=Hapmap2;RS=rs838615251;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	167411261	167411360	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:163525091;1allele=A/G;version=Hapmap2;RS=rs276383969;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	167476155	167476254	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:163565736;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	167537571	167537670	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:163648473;1allele=C/T;version=Hapmap2;RS=rs825243140;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	167552059	167552158	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:163662961;1allele=C/T;version=Hapmap2;RS=rs128791756;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	167615507	167615606	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:163723959;1allele=G/A;version=Hapmap2;RS=rs128791808;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	167850460	167850559	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:163955213;1allele=C/T;version=Hapmap2;RS=rs131811325;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	168059678	168059777	.	+	.	Name=Total_amino_acids;B73v2_pos=1:164149296;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	168374498	168374597	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:164489609;1allele=G/A;version=Hapmap2;RS=rs805400183;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	168378506	168378605	.	+	.	Name=Plant_height;B73v2_pos=1:164493617;1allele=C/T;version=Hapmap2;RS=rs848626752;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	168512495	168512594	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:164642396;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	168809344	168809443	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:164923228;1allele=C/T;version=Hapmap2;RS=rs815684853;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	169122120	169122219	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:165232864;1allele=G/A;version=Hapmap2;RS=rs817558356;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	169385389	169385488	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:165446836;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	169387989	169388088	.	+	.	Name=Height_above_ear;B73v2_pos=1:165473303;1allele=C/T;version=Hapmap2;RS=rs805902889;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	169392529	169392628	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:165477842;1allele=T/C;version=Hapmap2;RS=rs836668755;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	169395436	169395535	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:165480749;1allele=T/A;version=Hapmap2;RS=rs840931178;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	169405192	169405291	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:165491406;1allele=A/C;version=Hapmap2;RS=rs816624554;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	169421180	169421279	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:165507396;1allele=C/T;version=Hapmap2;RS=rs276385404;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	169421193	169421292	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:165507409;1allele=G/A;version=Hapmap2;RS=rs276385405;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	169431860	169431959	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:165518077;1allele=A/C;version=Hapmap2;RS=rs818067796;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	169921224	169921323	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:165993570;1allele=G/C;version=Hapmap2;RS=rs726514075;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	170185709	170185808	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:166270777;1allele=G/T;version=Hapmap2;RS=rs808908577;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	170309888	170309987	.	+	.	Name=Total_amino_acids;B73v2_pos=1:166387959;1allele=C/T;version=Hapmap2;RS=rs816019907;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	170409070	170409169	.	+	.	Name=Ear_row_number;B73v2_pos=1:166518612;1allele=C/T;version=Hapmap2;RS=rs839344954;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	170409133	170409232	.	+	.	Name=Ear_row_number;B73v2_pos=1:166518675;1allele=T/G;version=Hapmap2;RS=rs818463838;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	170447758	170447857	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:166555939;1allele=G/T;version=Hapmap2;RS=rs833719030;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	170507704	170507803	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:166616107;1allele=G/A;version=Hapmap2;RS=rs824306193;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	170513123	170513222	.	+	.	Name=Stalk_strength;B73v2_pos=1:166621527;1allele=C/T;version=Hapmap2;RS=rs812511923;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	170628047	170628146	.	+	.	Name=Tassel_length;B73v2_pos=1:166728153;1allele=G/A;version=Hapmap2;RS=rs844299461;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	170708418	170708517	.	+	.	Name=Glutamate;B73v2_pos=1:166807910;1allele=C/T;version=Hapmap2;RS=rs131812913;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	170750538	170750637	.	+	.	Name=Height_above_ear;B73v2_pos=1:166850042;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	170826789	170826888	.	+	.	Name=Height_above_ear;B73v2_pos=1:166925892;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	170827745	170827844	.	+	.	Name=Glutamate;B73v2_pos=1:166926871;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	170857151	170857250	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:166963559;1allele=G/T;version=Hapmap2;RS=rs839954983;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	170900031	170900130	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:166985850;1allele=C/T;version=Hapmap2;RS=rs835747321;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	170952954	170953053	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:167029483;1allele=T/A;version=Hapmap2;RS=rs725040366;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	170957059	170957158	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:167033588;1allele=A/C;version=Hapmap2;RS=rs808277922;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	170982324	170982423	.	+	.	Name=Leaf_width;B73v2_pos=1:167058857;1allele=G/A;version=Hapmap2;RS=rs276386898;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	170983992	170984091	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:167060525;1allele=T/C;version=Hapmap2;RS=rs828298134;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	171146248	171146347	.	+	.	Name=Height_above_ear;B73v2_pos=1:167215637;1allele=G/A;version=Hapmap2;RS=rs802568450;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	171146681	171146780	.	+	.	Name=Height_above_ear;B73v2_pos=1:167216070;1allele=G/A;version=Hapmap2;RS=rs276387113;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	171159731	171159830	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:167229123;1allele=A/T;version=Hapmap2;RS=rs128797111;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	171180537	171180636	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:167259717;1allele=C/T;version=Hapmap2;RS=rs128797154;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	171227562	171227661	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:167306744;1allele=A/G;version=Hapmap2;RS=rs276387205;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	171595579	171595678	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:167645572;1allele=A/C;version=Hapmap2;RS=rs808706245;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	171977671	171977770	.	+	.	Name=Ear_row_number;B73v2_pos=1:168033866;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	172013899	172013998	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:168070197;1allele=T/C;version=Hapmap2;RS=rs276387601;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	172193282	172193381	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:168237147;1allele=C/T;version=Hapmap2;RS=rs128797971;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	172659499	172659599	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:168690966;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	172778110	172778209	.	+	.	Name=Height_above_ear;B73v2_pos=1:168810530;1allele=C/T;version=Hapmap2;RS=rs1062016307;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	172899504	172899603	.	+	.	Name=Height_above_ear;B73v2_pos=1:168886658;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	173003426	173003525	.	+	.	Name=Height_above_ear;B73v2_pos=1:168988784;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	173010938	173011037	.	+	.	Name=Total_amino_acids;B73v2_pos=1:168996334;1allele=C/T;version=Hapmap2;RS=rs822600652;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	173065239	173065338	.	+	.	Name=Nitrate;B73v2_pos=3:6612697;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	173090634	173090733	.	+	.	Name=Stalk_strength;B73v2_pos=1:270874280;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	173111240	173111339	.	+	.	Name=Ear_row_number;B73v2_pos=1:169095438;1allele=G/A;version=Hapmap2;RS=rs845010430;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	173142610	173142709	.	+	.	Name=Height_above_ear;B73v2_pos=1:169126576;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	173528213	173528312	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:169501452;1allele=T/G;version=Hapmap2;RS=rs839207884;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	173998151	173998250	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:169952252;1allele=G/A;version=Hapmap2;RS=rs844049106;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	174237024	174237123	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:170187260;1allele=C/A;version=Hapmap2;RS=rs831975897;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	174325371	174325470	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:170275590;1allele=A/G;version=Hapmap2;RS=rs128802394;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	174355163	174355262	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:170305388;1allele=G/T;version=Hapmap2;RS=rs131814318;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	174356448	174356547	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:170306673;1allele=T/G;version=Hapmap2;RS=rs131814325;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	174359508	174359607	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:170309733;1allele=A/G;version=Hapmap1;RS=rs128802513;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	174359745	174359844	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:170309970;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	174359977	174360076	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:170310202;1allele=C/T;version=Hapmap2;RS=rs131814339;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	174360246	174360345	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:170310471;1allele=A/T;version=Hapmap2;RS=rs812069482;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	174651694	174651793	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:170601627;1allele=A/T;version=Hapmap2;RS=rs838269939;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	174895850	174895949	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:170851897;1allele=C/G;version=Hapmap2;RS=rs131814691;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	174898192	174898291	.	+	.	Name=Height_above_ear;B73v2_pos=1:170854239;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	174945167	174945265	.	+	.	Name=Height_above_ear;B73v2_pos=1:170921016;1allele=A/T;version=Hapmap2;RS=rs804615516;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	175612289	175612388	.	+	.	Name=Height_above_ear;B73v2_pos=1:171554355;1allele=T/G;version=Hapmap2;RS=rs803840626;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	175834594	175834693	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:171783821;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	175859871	175859970	.	+	.	Name=Height_above_ear;B73v2_pos=1:171874207;1allele=C/T;version=Hapmap2;RS=rs276392658;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	175976460	175976559	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:171925508;1allele=A/C;version=Hapmap2;RS=rs820123557;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	176074561	176074660	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:172023633;1allele=A/G;version=Hapmap2;RS=rs845333644;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	176083361	176083460	.	+	.	Name=Leaf_width;B73v2_pos=1:172032435;1allele=G/A;version=Hapmap2;RS=rs276392852;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	176170293	176170392	.	+	.	Name=Leaf_length;B73v2_pos=1:172114059;1allele=A/G;version=Hapmap2;RS=rs827433325;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	176263050	176263149	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:172281466;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176264344	176264443	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:172280172;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176267272	176267371	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:172277242;1allele=C/T;version=Hapmap2;RS=rs849812352;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	176270992	176271091	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:172234795;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176271076	176271175	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:172234711;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176276995	176277094	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:172228792;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176278093	176278192	.	+	.	Name=Leaf_width;B73v2_pos=1:172227694;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176284656	176284755	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:172221131;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176284692	176284791	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:172221095;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176458931	176459030	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:172400876;1allele=G/A;version=Hapmap1;RS=rs131815382;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	176717344	176717443	.	+	.	Name=Stalk_strength;B73v2_pos=1:172654806;1allele=G/A;version=Hapmap2;RS=rs845327231;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	176837599	176837698	.	+	.	Name=Stalk_strength;B73v2_pos=1:172774842;1allele=C/T;version=Hapmap2;RS=rs810228505;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	176943630	176943729	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:172881049;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176944445	176944544	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:172880234;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176944480	176944579	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:172880199;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	176947834	176947933	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:172876845;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	177193825	177193924	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:173123488;1allele=G/A;version=Hapmap2;RS=rs802790231;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	177196111	177196210	.	+	.	Name=Ear_row_number;B73v2_pos=1:173125774;1allele=G/T;version=Hapmap2;RS=rs817764660;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	177196321	177196420	.	+	.	Name=Ear_row_number;B73v2_pos=1:173125984;1allele=A/G;version=Hapmap2;RS=rs847771094;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	177223101	177223200	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:173153622;1allele=C/A;version=Hapmap2;RS=rs840824099;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	177290562	177290661	.	+	.	Name=Ear_row_number;B73v2_pos=1:173221083;1allele=A/C;version=Hapmap2;RS=rs276393683;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	177296389	177296488	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:173226910;1allele=A/T;version=Hapmap2;RS=rs131815940;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	177342353	177342452	.	+	.	Name=Height_above_ear;B73v2_pos=1:173272762;1allele=C/G;version=Hapmap2;RS=rs807910696;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	177342353	177342452	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:173272762;1allele=C/G;version=Hapmap2;RS=rs807910696;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	177388004	177388103	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:173309686;1allele=A/G;version=Hapmap2;RS=rs838598247;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	177391914	177392013	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:173313597;1allele=C/T;version=Hapmap2;RS=rs128806515;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	177392164	177392263	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:173313847;1allele=A/G;version=Hapmap2;RS=rs128806516;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	177392358	177392457	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:173314041;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	177393919	177394018	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:173315602;1allele=A/G;version=Hapmap2;RS=rs128806535;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	177514745	177514844	.	+	.	Name=Ear_row_number;B73v2_pos=1:173426252;1allele=C/T;version=Hapmap2;RS=rs837838277;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	177556818	177556917	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:173469034;1allele=A/G;version=Hapmap2;RS=rs803354477;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	177683754	177683853	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:173568510;1allele=A/G;version=Hapmap2;RS=rs812461343;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	177695770	177695869	.	+	.	Name=Ear_height;B73v2_pos=1:173580526;1allele=G/A;version=Hapmap2;RS=rs803829911;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	177696959	177697058	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:173581715;1allele=T/C;version=Hapmap2;RS=rs830585475;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	177696974	177697073	.	+	.	Name=Plant_height;B73v2_pos=1:173581730;1allele=G/A;version=Hapmap2;RS=rs814793984;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	177762894	177762993	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:173678757;1allele=G/C;version=Hapmap2;RS=rs276394253;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	177811585	177811684	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:173714737;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	177939859	177939958	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:173846177;1allele=A/G;version=Hapmap2;RS=rs131816255;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	177963264	177963363	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:173865081;1allele=/CGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	177963655	177963754	.	+	.	Name=Ear_row_number;B73v2_pos=1:173865472;1allele=T/C;version=Hapmap1;RS=rs128807287;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	177971287	177971386	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:173873104;1allele=G/C;version=Hapmap1;RS=rs131816379;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	178121186	178121285	.	+	.	Name=Plant_height;B73v2_pos=1:174010121;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	178284185	178284284	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:174172906;1allele=T/G;version=Hapmap1;RS=rs131816544;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	178285645	178285744	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:174174366;1allele=A/C;version=Hapmap2;RS=rs848176338;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	178285656	178285755	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:174174377;1allele=G/C;version=Hapmap2;RS=rs814627522;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	178325381	178325480	.	+	.	Name=Glutamate;B73v2_pos=1:174216486;1allele=T/G;version=Hapmap2;RS=rs822965029;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	178408778	178408877	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:174293598;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	178433701	178433800	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:174318518;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	178463421	178463520	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:174340426;1allele=G/A;version=Hapmap2;RS=rs128807808;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	178463421	178463520	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174340426;1allele=G/A;version=Hapmap2;RS=rs128807808;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	178466972	178467071	.	+	.	Name=Starch;B73v2_pos=1:174343978;1allele=T/C;version=Hapmap2;RS=rs826041813;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	178473651	178473750	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174350658;1allele=A/C;version=Hapmap2;RS=rs128807817;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	178475407	178475502	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174352414;1allele=G/A;version=Hapmap2;RS=rs847978600;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	178477795	178477894	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174365175;1allele=G/A;version=Hapmap2;RS=rs810293900;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	178477877	178477976	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174365257;1allele=C/T;version=Hapmap2;RS=rs824707219;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	178477882	178477981	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:174365262;1allele=C/T;version=Hapmap2;RS=rs276394725;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	178477882	178477981	.	+	.	Name=Height_above_ear;B73v2_pos=1:174365262;1allele=C/T;version=Hapmap2;RS=rs276394725;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	178481714	178481813	.	+	.	Name=Height_above_ear;B73v2_pos=1:174368980;1allele=C/A;version=Hapmap2;RS=rs828616996;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	178487209	178487308	.	+	.	Name=Height_above_ear;B73v2_pos=1:174374479;1allele=G/C;version=Hapmap2;RS=rs131816923;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	178627911	178628010	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:174514057;1allele=C/T;version=Hapmap2;RS=rs276394820;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	178661660	178661759	.	+	.	Name=Height_above_ear;B73v2_pos=1:174548292;1allele=C/A;version=Hapmap2;RS=rs128808140;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	178661660	178661759	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:174548292;1allele=C/A;version=Hapmap2;RS=rs128808140;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	178674484	178674583	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:174561146;1allele=A/C;version=Hapmap1;RS=rs131817066;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	178675507	178675606	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:174562169;1allele=G/A;version=Hapmap1;RS=rs128808177;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	178676865	178676964	.	+	.	Name=Height_above_ear;B73v2_pos=1:174563527;1allele=T/A;version=Hapmap2;RS=rs276394912;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	178735669	178735768	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174621071;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	178915932	178916031	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:174794752;1allele=A/G;version=Hapmap2;RS=rs128808412;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	178928638	178928737	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:174807637;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	178970990	178971089	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174867890;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	178982508	178982607	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:174879367;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	179059218	179059317	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:174934289;1allele=C/T;version=Hapmap2;RS=rs847088308;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	179089797	179089896	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:174965026;1allele=G/C;version=Hapmap2;RS=rs131817232;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	179106829	179106928	.	+	.	Name=Ear_row_number;B73v2_pos=1:174982058;1allele=C/T;version=Hapmap1;RS=rs131817238;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	179106830	179106929	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:174982059;1allele=G/A;version=Hapmap1;RS=rs131817239;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	179125640	179125739	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:175000208;1allele=G/A;version=Hapmap2;RS=rs828872324;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	179339639	179339738	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:175265401;1allele=A/T;version=Hapmap2;RS=rs813426903;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	179367707	179367806	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:175293483;1allele=G/A;version=Hapmap2;RS=rs276395368;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	179420606	179420705	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:175348646;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	179554613	179554712	.	+	.	Name=Glutamate;B73v2_pos=1:175481345;1allele=C/T;version=Hapmap2;RS=rs818597464;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	179555576	179555675	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:175482308;1allele=T/C;version=Hapmap2;RS=rs813622214;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	179620006	179620105	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:175547410;1allele=-/+;version=Hapmap2;RS=rs809615760;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	179706258	179706357	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:175632660;1allele=G/T;version=Hapmap2;RS=rs844739155;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	179712693	179712792	.	+	.	Name=Height_above_ear;B73v2_pos=1:175639095;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	179810233	179810331	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:175732258;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	179922571	179922670	.	+	.	Name=Glutamate;B73v2_pos=1:175869054;1allele=C/T;version=Hapmap2;RS=rs830277109;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	179923379	179923478	.	+	.	Name=Glutamate;B73v2_pos=1:175868246;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	179942925	179943024	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:175848273;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	180043639	180043738	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:176007282;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	180117402	180117501	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:176054951;1allele=T/A;version=Hapmap2;RS=rs128809950;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	180177170	180177269	.	+	.	Name=Starch;B73v2_pos=1:176123785;1allele=G/A;version=Hapmap2;RS=rs849812357;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	180217680	180217779	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:176164126;1allele=A/G;version=Hapmap2;RS=rs834546932;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	180301618	180301717	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:176240197;1allele=C/T;version=Hapmap2;RS=rs128810363;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	180420574	180420673	.	+	.	Name=Leaf_width;B73v2_pos=1:176347067;1allele=G/A;version=Hapmap2;RS=rs844457173;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	180678478	180678577	.	+	.	Name=Height_above_ear;B73v2_pos=1:176609547;1allele=G/A;version=Hapmap2;RS=rs817199076;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	180685822	180685921	.	+	.	Name=Height_above_ear;B73v2_pos=1:176616891;1allele=G/T;version=Hapmap2;RS=rs843726749;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	180764577	180764676	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:176695661;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	180805595	180805694	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:176736801;1allele=G/A;version=Hapmap2;RS=rs833393122;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	180814381	180814480	.	+	.	Name=Height_above_ear;B73v2_pos=1:176745587;1allele=A/G;version=Hapmap2;RS=rs816461448;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	180828058	180828157	.	+	.	Name=Tassel_length;B73v2_pos=1:176759263;1allele=/GGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	180861069	180861168	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:176792281;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	180913892	180913991	.	+	.	Name=Height_above_ear;B73v2_pos=1:176845092;1allele=C/T;version=Hapmap1;RS=rs131818419;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	180939236	180939335	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:176866423;1allele=G/T;version=Hapmap2;RS=rs276397228;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	181021853	181021952	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:176950136;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	181026450	181026549	.	+	.	Name=Ear_row_number;B73v2_pos=1:176945539;1allele=A/C;version=Hapmap2;RS=rs131818544;2ref_allele=CT;3alt_allele=C
chr1	Wallace_2014	SNP	181035682	181035781	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:176936305;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	181092432	181092531	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:177036177;1allele=T/C;version=Hapmap2;RS=rs276397412;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	181111805	181111904	.	+	.	Name=Height_above_ear;B73v2_pos=1:177055550;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	181115614	181115713	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:177059357;1allele=A/G;version=Hapmap2;RS=rs823136993;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	181125571	181125670	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:177025847;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	181268610	181268709	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:177224177;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	181374303	181374402	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:177302431;1allele=G/A;version=Hapmap2;RS=rs807008184;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	181384478	181384577	.	+	.	Name=Ear_row_number;B73v2_pos=1:177312606;1allele=G/A;version=Hapmap2;RS=rs726805934;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	181411066	181411165	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:177338420;1allele=C/T;version=Hapmap2;RS=rs1063280577;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	181425891	181425990	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:177353247;1allele=C/T;version=Hapmap2;RS=rs805594776;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	181509462	181509561	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:177436470;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	181629271	181629370	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:177534430;1allele=C/T;version=Hapmap2;RS=rs131818946;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	181710457	181710556	.	+	.	Name=Plant_height;B73v2_pos=1:177627878;1allele=G/A;version=Hapmap2;RS=rs276398243;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	181710520	181710619	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:177627941;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	181752535	181752634	.	+	.	Name=Glutamate;B73v2_pos=1:177667818;1allele=C/T;version=Hapmap2;RS=rs822218864;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	181773959	181774058	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:177689242;1allele=C/T;version=Hapmap2;RS=rs809556094;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	181809012	181809111	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:177724150;1allele=G/A;version=Hapmap2;RS=rs276398386;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	181920886	181920985	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:177772562;1allele=T/C;version=Hapmap2;RS=rs813976013;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	182031162	182031261	.	+	.	Name=Height_above_ear;B73v2_pos=1:177910363;1allele=T/C;version=Hapmap2;RS=rs811601763;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	182051286	182051385	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:177930494;1allele=A/G;version=Hapmap2;RS=rs832636915;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	182076549	182076648	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:178009095;1allele=T/C;version=Hapmap1;RS=rs131819131;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	182362567	182362666	.	+	.	Name=Glutamate;B73v2_pos=1:178264538;1allele=C/T;version=Hapmap2;RS=rs836273681;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	182374962	182375061	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:178276931;1allele=A/C;version=Hapmap2;RS=rs834013533;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	182401266	182401365	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:178321209;1allele=T/C;version=Hapmap2;RS=rs128814246;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	182401866	182401965	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:178321809;1allele=C/T;version=Hapmap2;RS=rs128814253;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	182452556	182452655	.	+	.	Name=Malate;B73v2_pos=1:178374947;1allele=G/A;version=Hapmap2;RS=rs128814340;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	182466177	182466276	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:178388573;1allele=A/G;version=Hapmap2;RS=rs839067629;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	182481225	182481324	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:178403079;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	182481579	182481678	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:178403433;1allele=CAT/;version=Hapmap1;RS=rs823399789;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	182485135	182485234	.	+	.	Name=Height_above_ear;B73v2_pos=1:178405862;1allele=G/A;version=Hapmap2;RS=rs128814484;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	182486041	182486140	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:178406768;1allele=G/T;version=Hapmap2;RS=rs276398993;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	182488938	182489037	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:178409665;1allele=C/T;version=Hapmap2;RS=rs276399027;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	182500674	182500773	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:178421401;1allele=G/A;version=Hapmap2;RS=rs276399043;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	182500674	182500773	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:178421401;1allele=G/A;version=Hapmap2;RS=rs276399043;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	182501333	182501432	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:178422060;1allele=A/C;version=Hapmap2;RS=rs128814613;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	182509299	182509398	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:178429982;1allele=T/C;version=Hapmap2;RS=rs276399103;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	182514128	182514227	.	+	.	Name=Total_amino_acids;B73v2_pos=1:178445226;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	182558553	182558652	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:178478840;1allele=G/C;version=Hapmap2;RS=rs821432636;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	182572952	182573051	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:178492703;1allele=T/A;version=Hapmap2;RS=rs128814732;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	182701204	182701303	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:178620362;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	182768907	182769006	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:178686997;1allele=G/A;version=Hapmap2;RS=rs826095067;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	182777843	182777942	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:178695932;1allele=G/A;version=Hapmap2;RS=rs819226154;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	182851020	182851119	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:178769117;1allele=G/A;version=Hapmap2;RS=rs840681477;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	182861646	182861745	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:178782508;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	182867484	182867583	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:178776680;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	182924418	182924517	.	+	.	Name=Plant_height;B73v2_pos=1:178848180;1allele=C/T;version=Hapmap1;RS=rs131819543;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	183024646	183024745	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:178945874;1allele=C/T;version=Hapmap2;RS=rs831699972;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	183027274	183027373	.	+	.	Name=Ear_row_number;B73v2_pos=1:178948502;1allele=C/T;version=Hapmap2;RS=rs1063898050;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	183032222	183032321	.	+	.	Name=Plant_height;B73v2_pos=1:178953381;1allele=G/C;version=Hapmap2;RS=rs808459530;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	183044573	183044672	.	+	.	Name=Ear_height;B73v2_pos=1:178964909;1allele=T/A;version=Hapmap2;RS=rs276399524;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	183046573	183046672	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:178966909;1allele=T/C;version=Hapmap2;RS=rs725825598;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183047146	183047245	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:178967482;1allele=C/T;version=Hapmap2;RS=rs813367327;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	183063068	183063167	.	+	.	Name=Plant_height;B73v2_pos=1:178983406;1allele=G/A;version=Hapmap2;RS=rs802130698;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	183063105	183063204	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:178983443;1allele=A/G;version=Hapmap2;RS=rs834430718;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	183112373	183112472	.	+	.	Name=Plant_height;B73v2_pos=1:179032726;1allele=A/T;version=Hapmap2;RS=rs837960115;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	183123516	183123615	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:179043869;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183184169	183184268	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:179104529;1allele=C/G;version=Hapmap2;RS=rs276399751;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	183184372	183184471	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:179104732;1allele=T/C;version=Hapmap2;RS=rs128815762;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183225955	183226054	.	+	.	Name=Plant_height;B73v2_pos=1:179146356;1allele=A/G;version=Hapmap2;RS=rs725504001;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	183235885	183235984	.	+	.	Name=Plant_height;B73v2_pos=1:179156319;1allele=T/A;version=Hapmap2;RS=rs725841785;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	183237365	183237464	.	+	.	Name=Plant_height;B73v2_pos=1:179157799;1allele=A/G;version=Hapmap2;RS=rs128815848;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	183237622	183237721	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:179158056;1allele=T/C;version=Hapmap2;RS=rs727202902;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183247854	183247953	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:179168287;1allele=G/T;version=Hapmap2;RS=rs724218997;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	183250053	183250152	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:179170484;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183261561	183261660	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:179181992;1allele=T/C;version=Hapmap2;RS=rs276399843;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183265119	183265218	.	+	.	Name=Plant_height;B73v2_pos=1:179185550;1allele=A/G;version=Hapmap1;RS=rs131819665;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	183265386	183265485	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:179185817;1allele=C/A;version=Hapmap1;RS=rs827339477;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	183320487	183320586	.	+	.	Name=Ear_height;B73v2_pos=1:179241390;1allele=A/C;version=Hapmap1;RS=rs131819677;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	183419336	183419435	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179340417;1allele=G/A;version=Hapmap2;RS=rs815858709;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	183425261	183425360	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:179346342;1allele=C/T;version=Hapmap2;RS=rs276399955;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	183426516	183426615	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:179347597;1allele=C/T;version=Hapmap2;RS=rs131819761;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	183446125	183446224	.	+	.	Name=Tassel_length;B73v2_pos=1:179368443;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183656200	183656299	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:179569486;1allele=C/A;version=Hapmap2;RS=rs804854420;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	183658628	183658727	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:179571914;1allele=T/G;version=Hapmap1;RS=rs131819833;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	183675335	183675434	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:179588503;1allele=G/A;version=Hapmap2;RS=rs131819932;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	183675476	183675575	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:179588644;1allele=C/G;version=Hapmap1;RS=rs131819935;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	183679571	183679670	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:179592739;1allele=A/G;version=Hapmap2;RS=rs131819988;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	183683249	183683348	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179596416;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183683373	183683472	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179596540;1allele=C/T;version=Hapmap2;RS=rs131820020;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	183683990	183684089	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179597157;1allele=T/C;version=Hapmap1;RS=rs131820023;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183708137	183708236	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179628138;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183729165	183729264	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179641676;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183729487	183729586	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179641998;1allele=T/C;version=Hapmap2;RS=rs131820067;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183729742	183729841	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179642253;1allele=C/A;version=Hapmap2;RS=rs276400209;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	183730371	183730470	.	+	.	Name=Ear_row_number;B73v2_pos=1:179642882;1allele=/TCCAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183732969	183733068	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:179645478;1allele=T/C;version=Hapmap2;RS=rs128816380;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183795655	183795754	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:179702191;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183842010	183842109	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:179745899;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183842029	183842128	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:179745880;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183844446	183844545	.	+	.	Name=Ear_row_number;B73v2_pos=1:179743463;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183907223	183907322	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:179806083;1allele=T/G;version=Hapmap2;RS=rs816661096;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	183926773	183926872	.	+	.	Name=Ear_row_number;B73v2_pos=1:179825636;1allele=C/T;version=Hapmap2;RS=rs276400484;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	183927993	183928092	.	+	.	Name=Ear_row_number;B73v2_pos=1:179826856;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183928508	183928607	.	+	.	Name=Ear_row_number;B73v2_pos=1:179827371;1allele=C/A;version=Hapmap2;RS=rs128816634;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	183933941	183934040	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179832804;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183955292	183955359	.	+	.	Name=Ear_height;B73v2_pos=1:179867691;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	183958404	183958503	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:179870933;1allele=G/C;version=Hapmap1;RS=rs131820510;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	183972068	183972167	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:179885092;1allele=T/G;version=Hapmap2;RS=rs845258309;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	183981101	183981200	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:179894125;1allele=C/T;version=Hapmap2;RS=rs846027460;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	184008083	184008182	.	+	.	Name=Glutamate;B73v2_pos=1:179921203;1allele=A/G;version=Hapmap2;RS=rs276400566;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	184009179	184009278	.	+	.	Name=Glutamate;B73v2_pos=1:179922299;1allele=C/G;version=Hapmap2;RS=rs131820443;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	184009254	184009353	.	+	.	Name=Glutamate;B73v2_pos=1:179922374;1allele=C/T;version=Hapmap2;RS=rs276400580;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	184014451	184014550	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179927573;1allele=T/C;version=Hapmap2;RS=rs826531715;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	184066405	184066504	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:179978530;1allele=G/A;version=Hapmap2;RS=rs818356538;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	184070125	184070224	.	+	.	Name=Total_amino_acids;B73v2_pos=1:179982250;1allele=G/A;version=Hapmap2;RS=rs131820637;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	184071677	184071776	.	+	.	Name=Height_above_ear;B73v2_pos=1:179983802;1allele=A/G;version=Hapmap2;RS=rs825823401;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	184072035	184072134	.	+	.	Name=Height_above_ear;B73v2_pos=1:179984160;1allele=G/A;version=Hapmap2;RS=rs848399960;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	184072036	184072135	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:179984161;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184072828	184072927	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:179984953;1allele=A/T;version=Hapmap2;RS=rs816083954;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	184076086	184076185	.	+	.	Name=Tassel_length;B73v2_pos=1:179988211;1allele=C/T;version=Hapmap2;RS=rs128816807;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	184078764	184078863	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:179990889;1allele=G/A;version=Hapmap2;RS=rs837577535;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	184128474	184128573	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:180039475;1allele=G/A;version=Hapmap2;RS=rs825630218;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	184185933	184186032	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180099505;1allele=T/G;version=Hapmap2;RS=rs810451251;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	184200492	184200591	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:180114065;1allele=A/C;version=Hapmap2;RS=rs847988169;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	184220856	184220955	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:180134429;1allele=A/T;version=Hapmap2;RS=rs131820784;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	184223989	184224088	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:180137562;1allele=C/T;version=Hapmap2;RS=rs1060972138;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	184311994	184312093	.	+	.	Name=Glutamate;B73v2_pos=1:180225749;1allele=C/T;version=Hapmap2;RS=rs844157414;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	184376587	184376686	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:180268926;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184390234	184390333	.	+	.	Name=Glutamate;B73v2_pos=1:180305280;1allele=G/A;version=Hapmap2;RS=rs1063523914;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	184391166	184391265	.	+	.	Name=Glutamate;B73v2_pos=1:180306212;1allele=C/-;version=Hapmap1;RS=rs131820815;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	184437754	184437853	.	+	.	Name=Height_above_ear;B73v2_pos=1:180342269;1allele=A/G;version=Hapmap2;RS=rs131820905;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	184439047	184439146	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:180343562;1allele=C/T;version=Hapmap2;RS=rs840166650;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	184483398	184483497	.	+	.	Name=Height_above_ear;B73v2_pos=1:180400761;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184484952	184485051	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:180399207;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184485736	184485835	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:180398423;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184485736	184485835	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:180398423;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184486481	184486580	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180397678;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184488277	184488376	.	+	.	Name=Glutamate;B73v2_pos=1:180395882;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184538111	184538210	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:180446020;1allele=A/C;version=Hapmap2;RS=rs810058177;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	184538121	184538220	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:180446030;1allele=A/C;version=Hapmap2;RS=rs817066183;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	184571245	184571344	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180504676;1allele=A/T;version=Hapmap2;RS=rs843456992;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	184571257	184571356	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180504688;1allele=A/G;version=Hapmap2;RS=rs131821064;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	184608305	184608404	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:180467894;1allele=C/T;version=Hapmap2;RS=rs849860805;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	184650320	184650419	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:180580729;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184671212	184671311	.	+	.	Name=Tassel_length;B73v2_pos=1:180602062;1allele=C/T;version=Hapmap2;RS=rs806626808;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	184769708	184769807	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180702677;1allele=C/T;version=Hapmap2;RS=rs833263505;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	184779002	184779101	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180543091;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184779104	184779203	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180542989;1allele=G/A;version=Hapmap2;RS=rs726211334;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	184789912	184790011	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180526724;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184790698	184790797	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:180525938;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184815696	184815795	.	+	.	Name=Ear_row_number;B73v2_pos=1:180729149;1allele=G/C;version=Hapmap2;RS=rs276402008;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	184819978	184820077	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:180733431;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	184901615	184901714	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:180813336;1allele=G/A;version=Hapmap2;RS=rs824218028;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	184996331	184996430	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:180908242;1allele=T/C;version=Hapmap1;RS=rs131821528;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	185382468	185382567	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:181301142;1allele=G/A;version=Hapmap2;RS=rs276402598;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	185386341	185386440	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:181305015;1allele=A/C;version=Hapmap2;RS=rs128818736;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	185433447	185433546	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:181352026;1allele=A/G;version=Hapmap2;RS=rs829042107;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	185630398	185630497	.	+	.	Name=Ear_row_number;B73v2_pos=1:181559920;1allele=C/T;version=Hapmap2;RS=rs276403140;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	185633507	185633606	.	+	.	Name=Ear_row_number;B73v2_pos=1:181563030;1allele=T/C;version=Hapmap2;RS=rs816042536;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	185633666	185633765	.	+	.	Name=Ear_row_number;B73v2_pos=1:181563189;1allele=C/T;version=Hapmap2;RS=rs820768943;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	185634191	185634290	.	+	.	Name=Tassel_length;B73v2_pos=1:181563717;1allele=G/A;version=Hapmap2;RS=rs826234551;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	185638313	185638412	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:181567445;1allele=T/C;version=Hapmap2;RS=rs845971793;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	185642242	185642341	.	+	.	Name=Tassel_length;B73v2_pos=1:181571376;1allele=C/T;version=Hapmap1;RS=rs131821747;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	185771043	185771142	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:181687029;1allele=A/G;version=Hapmap2;RS=rs818251103;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	185773185	185773284	.	+	.	Name=Tassel_length;B73v2_pos=1:181689171;1allele=G/A;version=Hapmap2;RS=rs726373098;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	185804171	185804270	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:181724283;1allele=G/C;version=Hapmap2;RS=rs815706241;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	185814838	185814937	.	+	.	Name=Total_amino_acids;B73v2_pos=1:181734951;1allele=A/G;version=Hapmap2;RS=rs824276425;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	185916052	185916151	.	+	.	Name=Tassel_length;B73v2_pos=1:181843359;1allele=G/T;version=Hapmap2;RS=rs846617471;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	185917802	185917901	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:181845109;1allele=A/G;version=Hapmap2;RS=rs128819796;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	185938015	185938114	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181865325;1allele=A/G;version=Hapmap2;RS=rs838817764;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	185940459	185940558	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181867770;1allele=A/G;version=Hapmap2;RS=rs847407617;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	185943956	185944055	.	+	.	Name=Days_to_silk;B73v2_pos=1:181871267;1allele=A/C;version=Hapmap2;RS=rs841943955;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	185953783	185953882	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:181881676;1allele=G/C;version=Hapmap2;RS=rs276404084;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	185953831	185953930	.	+	.	Name=Ear_height;B73v2_pos=1:181881724;1allele=C/A;version=Hapmap2;RS=rs829328347;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	185966147	185966246	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181894858;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	185971600	185971699	.	+	.	Name=Glutamate;B73v2_pos=1:181900311;1allele=G/A;version=Hapmap2;RS=rs805612546;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	185976255	185976354	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181904966;1allele=A/T;version=Hapmap2;RS=rs804473239;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	185981417	185981516	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:181910128;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	185981417	185981516	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181910128;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186028761	186028860	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:181956431;1allele=G/T;version=Hapmap2;RS=rs276404391;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	186028761	186028860	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181956431;1allele=G/T;version=Hapmap2;RS=rs276404391;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	186030233	186030332	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181957903;1allele=C/T;version=Hapmap2;RS=rs822980001;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	186058731	186058830	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:181986403;1allele=G/T;version=Hapmap2;RS=rs839338013;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	186062729	186062828	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:181990401;1allele=G/A;version=Hapmap2;RS=rs276404581;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	186065240	186065339	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:181992912;1allele=T/G;version=Hapmap2;RS=rs825358657;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	186100294	186100393	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182027969;1allele=G/T;version=Hapmap2;RS=rs276404776;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	186246555	186246654	.	+	.	Name=Height_above_ear;B73v2_pos=1:182221480;1allele=C/G;version=Hapmap2;RS=rs828958391;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	186270754	186270853	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:182247088;1allele=A/C;version=Hapmap2;RS=rs128820966;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	186457769	186457868	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182390444;1allele=G/A;version=Hapmap2;RS=rs1060710916;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	186492837	186492936	.	+	.	Name=Glutamate;B73v2_pos=1:182419194;1allele=G/A;version=Hapmap2;RS=rs128821338;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	186494382	186494481	.	+	.	Name=Plant_height;B73v2_pos=1:182420739;1allele=C/T;version=Hapmap2;RS=rs128821330;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	186498654	186498753	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:182425011;1allele=C/T;version=Hapmap2;RS=rs835280494;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	186507648	186507747	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182434006;1allele=T/G;version=Hapmap2;RS=rs276405590;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	186566632	186566731	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:182498103;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186621707	186621806	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182553617;1allele=G/A;version=Hapmap2;RS=rs1064590663;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	186693591	186693690	.	+	.	Name=Height_above_ear;B73v2_pos=1:182625852;1allele=T/C;version=Hapmap2;RS=rs128821507;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	186695137	186695236	.	+	.	Name=Glutamate;B73v2_pos=1:182627398;1allele=A/G;version=Hapmap2;RS=rs276405953;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	186701867	186701966	.	+	.	Name=Height_above_ear;B73v2_pos=1:182657266;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186701890	186701989	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:182657243;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186702029	186702128	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:182657104;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186702233	186702332	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182656900;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186702563	186702662	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182656570;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186703888	186703987	.	+	.	Name=Tassel_length;B73v2_pos=1:182655245;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186704380	186704479	.	+	.	Name=Tassel_length;B73v2_pos=1:182654753;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186860460	186860559	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182778737;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186879083	186879182	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:182797359;1allele=G/A;version=Hapmap2;RS=rs801414573;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	186879144	186879243	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:182797420;1allele=T/C;version=Hapmap2;RS=rs724292344;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	186917989	186918088	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:182870089;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186921416	186921515	.	+	.	Name=Plant_height;B73v2_pos=1:182869104;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186923137	186923236	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:182867383;1allele=A/T;version=Hapmap2;RS=rs831094859;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	186923137	186923236	.	+	.	Name=Plant_height;B73v2_pos=1:182867383;1allele=A/T;version=Hapmap2;RS=rs831094859;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	186923144	186923243	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:182867376;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186923247	186923346	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:182867273;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	186974878	186974977	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182891131;1allele=C/A;version=Hapmap2;RS=rs810858838;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	186974878	186974977	.	+	.	Name=Ear_height;B73v2_pos=1:182891131;1allele=C/A;version=Hapmap2;RS=rs810858838;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	186983473	186983572	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182899727;1allele=T/G;version=Hapmap1;RS=rs128821790;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	186987393	186987492	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182903647;1allele=C/T;version=Hapmap2;RS=rs816749531;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	186987811	186987910	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:182904065;1allele=T/C;version=Hapmap2;RS=rs1061944399;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	186991195	186991294	.	+	.	Name=Tassel_length;B73v2_pos=1:182907449;1allele=C/T;version=Hapmap2;RS=rs802540672;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187006207	187006306	.	+	.	Name=Plant_height;B73v2_pos=1:182923422;1allele=G/A;version=Hapmap2;RS=rs811280198;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	187012699	187012798	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:182929918;1allele=T/C;version=Hapmap2;RS=rs813365217;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187015343	187015442	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:182932562;1allele=T/C;version=Hapmap2;RS=rs844413622;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187019645	187019744	.	+	.	Name=Tassel_length;B73v2_pos=1:182936865;1allele=T/G;version=Hapmap2;RS=rs128821942;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	187070029	187070128	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:182987256;1allele=A/C;version=Hapmap2;RS=rs808403430;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	187076793	187076892	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:182994020;1allele=T/A;version=Hapmap1;RS=rs131823039;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187076793	187076892	.	+	.	Name=Plant_height;B73v2_pos=1:182994020;1allele=T/A;version=Hapmap1;RS=rs131823039;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187079071	187079170	.	+	.	Name=Plant_height;B73v2_pos=1:182996298;1allele=C/T;version=Hapmap2;RS=rs815309676;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187112610	187112709	.	+	.	Name=Days_to_silk;B73v2_pos=1:183029695;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	187112672	187112771	.	+	.	Name=Height_above_ear;B73v2_pos=1:183029757;1allele=T/A;version=Hapmap2;RS=rs833827290;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	187115736	187115835	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:183032821;1allele=C/A;version=Hapmap2;RS=rs848131610;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187163218	187163317	.	+	.	Name=Height_above_ear;B73v2_pos=1:183080303;1allele=G/T;version=Hapmap2;RS=rs128822277;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	187167704	187167803	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:183084789;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	187181100	187181199	.	+	.	Name=Glutamate;B73v2_pos=1:183096165;1allele=T/-;version=Hapmap1;RS=rs131823087;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187181456	187181555	.	+	.	Name=Glutamate;B73v2_pos=1:183096521;1allele=T/C;version=Hapmap1;RS=rs128822329;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187183380	187183479	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183098445;1allele=A/C;version=Hapmap2;RS=rs128822337;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	187195263	187195362	.	+	.	Name=Leaf_width;B73v2_pos=1:183110328;1allele=A/G;version=Hapmap2;RS=rs808213032;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	187196274	187196373	.	+	.	Name=Leaf_width;B73v2_pos=1:183111339;1allele=G/A;version=Hapmap2;RS=rs843313163;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	187211134	187211233	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:183126200;1allele=C/T;version=Hapmap2;RS=rs849213331;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187237531	187237630	.	+	.	Name=Leaf_width;B73v2_pos=1:183150560;1allele=C/T;version=Hapmap2;RS=rs727315996;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187539749	187539848	.	+	.	Name=Height_above_ear;B73v2_pos=1:183452322;1allele=G/A;version=Hapmap1;RS=rs131823290;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	187539883	187539982	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:183452456;1allele=C/T;version=Hapmap1;RS=rs131823295;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187568445	187568544	.	+	.	Name=Tassel_length;B73v2_pos=1:183481019;1allele=A/G;version=Hapmap2;RS=rs826507183;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	187704106	187704205	.	+	.	Name=Height_above_ear;B73v2_pos=1:183612002;1allele=A/T;version=Hapmap1;RS=rs131823413;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	187767821	187767920	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183676653;1allele=G/A;version=Hapmap2;RS=rs276407040;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	187781881	187781980	.	+	.	Name=Plant_height;B73v2_pos=1:183690713;1allele=G/A;version=Hapmap1;RS=rs131823429;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	187898974	187899073	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183784556;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	187915772	187915871	.	+	.	Name=Leaf_width;B73v2_pos=1:183801354;1allele=C/T;version=Hapmap2;RS=rs276407177;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187917246	187917345	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:183802828;1allele=A/G;version=Hapmap2;RS=rs812751544;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	187917598	187917697	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183803180;1allele=T/C;version=Hapmap2;RS=rs128823152;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187917606	187917705	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183803188;1allele=C/A;version=Hapmap2;RS=rs276407186;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	187918864	187918963	.	+	.	Name=Plant_height;B73v2_pos=1:183804446;1allele=A/T;version=Hapmap2;RS=rs128823163;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	187919363	187919462	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183804945;1allele=C/G;version=Hapmap2;RS=rs837981088;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	187919762	187919861	.	+	.	Name=Plant_height;B73v2_pos=1:183805344;1allele=C/G;version=Hapmap2;RS=rs809985166;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	187925048	187925147	.	+	.	Name=Ear_row_number;B73v2_pos=1:183810630;1allele=T/A;version=Hapmap2;RS=rs276407246;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	187927533	187927632	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183813115;1allele=G/C;version=Hapmap2;RS=rs131823619;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	187927533	187927632	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183813115;1allele=G/C;version=Hapmap1;RS=rs131823619;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	187928719	187928818	.	+	.	Name=Plant_height;B73v2_pos=1:183814301;1allele=G/C;version=Hapmap1;RS=rs128823222;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	187930562	187930661	.	+	.	Name=Ear_height;B73v2_pos=1:183816144;1allele=C/G;version=Hapmap2;RS=rs131823662;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	187930620	187930719	.	+	.	Name=Glutamate;B73v2_pos=1:183816202;1allele=C/G;version=Hapmap1;RS=rs131823663;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187948889	187948988	.	+	.	Name=Height_above_ear;B73v2_pos=1:183834471;1allele=C/T;version=Hapmap2;RS=rs816135901;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187959146	187959245	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183844730;1allele=C/A;version=Hapmap2;RS=rs128823309;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	187960731	187960830	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:183846315;1allele=A/C;version=Hapmap2;RS=rs131823753;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	187963241	187963340	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183848825;1allele=G/T;version=Hapmap2;RS=rs128823323;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	187967429	187967528	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183853013;1allele=A/G;version=Hapmap2;RS=rs128823349;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	187968133	187968232	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183853717;1allele=T/C;version=Hapmap2;RS=rs128823355;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187968396	187968495	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183853980;1allele=T/G;version=Hapmap2;RS=rs276407347;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	187968727	187968826	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183854311;1allele=C/T;version=Hapmap2;RS=rs128823357;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	187968789	187968888	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183854373;1allele=T/C;version=Hapmap2;RS=rs128823358;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187968789	187968888	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183854373;1allele=T/C;version=Hapmap2;RS=rs128823358;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	187968960	187969059	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183854544;1allele=A/T;version=Hapmap2;RS=rs128823360;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	188004411	188004510	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183890357;1allele=-/+;version=Hapmap2;RS=rs809291251;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	188022315	188022414	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183908258;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188022525	188022624	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:183908468;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188022525	188022624	.	+	.	Name=Plant_height;B73v2_pos=1:183908468;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188022525	188022624	.	+	.	Name=Height_above_ear;B73v2_pos=1:183908468;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188024595	188024694	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183910538;1allele=C/-;version=Hapmap1;RS=rs131823788;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	188024985	188025084	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:183910928;1allele=A/C;version=Hapmap2;RS=rs849355021;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	188031970	188032069	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:183917913;1allele=T/C;version=Hapmap2;RS=rs828767407;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	188039550	188039649	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183925494;1allele=C/T;version=Hapmap2;RS=rs805168108;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	188048325	188048424	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183934270;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188051031	188051130	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183936976;1allele=T/A;version=Hapmap2;RS=rs837836767;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	188079960	188080059	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183965942;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188093648	188093747	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183979629;1allele=C/G;version=Hapmap2;RS=rs815832683;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	188095638	188095737	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183981619;1allele=T/C;version=Hapmap2;RS=rs131823810;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	188098737	188098836	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183984718;1allele=C/T;version=Hapmap2;RS=rs726729470;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	188105191	188105290	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183991172;1allele=G/A;version=Hapmap2;RS=rs128823477;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	188111834	188111933	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:183997812;1allele=G/A;version=Hapmap2;RS=rs276407470;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188114209	188114308	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:184000187;1allele=G/A;version=Hapmap2;RS=rs276407483;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188114209	188114308	.	+	.	Name=Height_above_ear;B73v2_pos=1:184000187;1allele=G/A;version=Hapmap2;RS=rs276407483;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188118967	188119066	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:184004945;1allele=G/A;version=Hapmap2;RS=rs824619232;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188118967	188119066	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184004945;1allele=G/A;version=Hapmap2;RS=rs824619232;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188118987	188119086	.	+	.	Name=Height_above_ear;B73v2_pos=1:184004965;1allele=C/A;version=Hapmap2;RS=rs276407495;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	188127794	188127893	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184013772;1allele=C/A;version=Hapmap2;RS=rs724212470;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	188131198	188131297	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184017176;1allele=A/T;version=Hapmap2;RS=rs814993181;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	188164271	188164370	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184050254;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188235567	188235666	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184114480;1allele=G/A;version=Hapmap2;RS=rs809689065;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188248989	188249088	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:184127900;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188274032	188274131	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184151552;1allele=G/A;version=Hapmap2;RS=rs1063731101;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	188395948	188396047	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:184235877;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188542631	188542730	.	+	.	Name=Tassel_length;B73v2_pos=1:184382990;1allele=T/A;version=Hapmap2;RS=rs833679911;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	188688595	188688694	.	+	.	Name=Leaf_width;B73v2_pos=1:184587655;1allele=G/A;version=Hapmap2;RS=rs801554824;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188797923	188798022	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184610908;1allele=T/C;version=Hapmap1;RS=rs276407697;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	188798047	188798146	.	+	.	Name=Height_above_ear;B73v2_pos=1:184611032;1allele=A/G;version=Hapmap2;RS=rs839530394;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	188798073	188798172	.	+	.	Name=Height_above_ear;B73v2_pos=1:184611058;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188798892	188798991	.	+	.	Name=Height_above_ear;B73v2_pos=1:184611877;1allele=G/A;version=Hapmap2;RS=rs832173357;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188799676	188799775	.	+	.	Name=Height_above_ear;B73v2_pos=1:184612661;1allele=G/A;version=Hapmap2;RS=rs276407706;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188809677	188809776	.	+	.	Name=Tassel_length;B73v2_pos=1:184622663;1allele=G/A;version=Hapmap2;RS=rs819043568;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188811082	188811181	.	+	.	Name=Tassel_length;B73v2_pos=1:184624068;1allele=G/A;version=Hapmap2;RS=rs828123378;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	188812808	188812907	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184625794;1allele=T/C;version=Hapmap2;RS=rs1061858154;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	188814534	188814633	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184627520;1allele=C/G;version=Hapmap1;RS=rs131824146;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	188815107	188815206	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184628093;1allele=G/C;version=Hapmap2;RS=rs1062773799;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	188862442	188862541	.	+	.	Name=Tassel_length;B73v2_pos=1:184699485;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188880470	188880569	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184654927;1allele=C/T;version=Hapmap2;RS=rs1061597774;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	188881073	188881172	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184655530;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	188881864	188881963	.	+	.	Name=Tassel_length;B73v2_pos=1:184656321;1allele=C/T;version=Hapmap2;RS=rs816311241;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	188883236	188883335	.	+	.	Name=Glutamate;B73v2_pos=1:184657693;1allele=A/G;version=Hapmap2;RS=rs812232459;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	188883557	188883656	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:184658014;1allele=T/C;version=Hapmap2;RS=rs833136193;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	188883914	188884013	.	+	.	Name=Ear_height;B73v2_pos=1:184658371;1allele=T/G;version=Hapmap1;RS=rs131824059;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	189026792	189026891	.	+	.	Name=Leaf_width;B73v2_pos=1:184862728;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	189070403	189070502	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184906338;1allele=A/G;version=Hapmap2;RS=rs804057482;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	189070403	189070502	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184906338;1allele=A/G;version=Hapmap2;RS=rs804057482;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	189072127	189072226	.	+	.	Name=Tassel_length;B73v2_pos=1:184908062;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	189106346	189106445	.	+	.	Name=Ear_row_number;B73v2_pos=1:184942281;1allele=A/G;version=Hapmap2;RS=rs128824250;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	189259556	189259655	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:185093580;1allele=A/G;version=Hapmap2;RS=rs841771598;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	189295464	189295563	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:185118186;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	189370581	189370680	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:185202429;1allele=C/T;version=Hapmap2;RS=rs1064273109;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	189372403	189372502	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:185204251;1allele=C/T;version=Hapmap2;RS=rs809194748;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	189372724	189372823	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:185204572;1allele=G/A;version=Hapmap1;RS=rs131824376;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	189428953	189429052	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:185260819;1allele=G/T;version=Hapmap2;RS=rs810011190;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	189428953	189429052	.	+	.	Name=Plant_height;B73v2_pos=1:185260819;1allele=G/T;version=Hapmap2;RS=rs810011190;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	189468258	189468357	.	+	.	Name=Plant_height;B73v2_pos=1:185298554;1allele=T/G;version=Hapmap2;RS=rs832509099;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	189641248	189641347	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:185465682;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	189641248	189641347	.	+	.	Name=Ear_height;B73v2_pos=1:185465682;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	189765866	189765965	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:185591586;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	189810719	189810818	.	+	.	Name=Plant_height;B73v2_pos=1:185636615;1allele=C/A;version=Hapmap2;RS=rs801764568;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	189907968	189908067	.	+	.	Name=Plant_height;B73v2_pos=1:185733864;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	189953915	189954014	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:185781679;1allele=C/A;version=Hapmap2;RS=rs846998683;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	189996223	189996322	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:185823989;1allele=A/C;version=Hapmap2;RS=rs818370835;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	190075885	190075984	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:185902890;1allele=C/G;version=Hapmap2;RS=rs813220375;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	190179744	190179843	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:186003585;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	190408118	190408217	.	+	.	Name=Height_above_ear;B73v2_pos=1:186234036;1allele=A/G;version=Hapmap2;RS=rs844111418;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	190473591	190473690	.	+	.	Name=Height_above_ear;B73v2_pos=1:186305146;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	190490439	190490538	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:186288294;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	190678079	190678178	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:186502342;1allele=C/T;version=Hapmap2;RS=rs1064037116;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	190745830	190745929	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:186570113;1allele=G/A;version=Hapmap2;RS=rs820896769;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	190820443	190820542	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:186639478;1allele=T/C;version=Hapmap2;RS=rs828076319;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	190970425	190970524	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:186780854;1allele=A/G;version=Hapmap2;RS=rs1062252518;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191045220	191045319	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:186856495;1allele=T/C;version=Hapmap2;RS=rs128825437;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191263043	191263142	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:187065867;1allele=A/G;version=Hapmap2;RS=rs836693289;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191292168	191292267	.	+	.	Name=Ear_height;B73v2_pos=1:187094991;1allele=C/G;version=Hapmap2;RS=rs128825641;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	191292397	191292496	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:187095220;1allele=T/C;version=Hapmap2;RS=rs128825643;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191292397	191292496	.	+	.	Name=Ear_height;B73v2_pos=1:187095220;1allele=T/C;version=Hapmap2;RS=rs128825643;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191352435	191352534	.	+	.	Name=Plant_height;B73v2_pos=1:187187103;1allele=G/A;version=Hapmap2;RS=rs725855487;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	191367722	191367821	.	+	.	Name=Glutamate;B73v2_pos=1:187202390;1allele=T/C;version=Hapmap2;RS=rs849123359;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191371079	191371178	.	+	.	Name=Leaf_width;B73v2_pos=1:187205747;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191385513	191385612	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187220178;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191414732	191414831	.	+	.	Name=Glutamate;B73v2_pos=1:187248700;1allele=G/A;version=Hapmap2;RS=rs838938845;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191416202	191416301	.	+	.	Name=Cob_diameter;B73v2_pos=1:187249642;1allele=+/-;version=Hapmap2;RS=rs801421182;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	191428762	191428861	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:187260667;1allele=/GGAGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191440505	191440604	.	+	.	Name=Tassel_length;B73v2_pos=1:187271991;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191441245	191441344	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:187272731;1allele=T/C;version=Hapmap2;RS=rs725033293;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191441439	191441538	.	+	.	Name=Plant_height;B73v2_pos=1:187272925;1allele=C/A;version=Hapmap2;RS=rs128825765;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	191441479	191441578	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187272965;1allele=C/T;version=Hapmap2;RS=rs276409155;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191454190	191454289	.	+	.	Name=Plant_height;B73v2_pos=1:187286271;1allele=A/G;version=Hapmap2;RS=rs824580540;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191460723	191460822	.	+	.	Name=Ear_row_number;B73v2_pos=1:187292804;1allele=C/T;version=Hapmap2;RS=rs818140777;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191478689	191478788	.	+	.	Name=Leaf_width;B73v2_pos=1:187310681;1allele=C/T;version=Hapmap2;RS=rs808587592;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	191497034	191497133	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187329382;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191498039	191498138	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187330386;1allele=A/C;version=Hapmap1;RS=rs131824935;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191520087	191520186	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187352366;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191523407	191523506	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187355686;1allele=G/A;version=Hapmap2;RS=rs128825899;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191523901	191524000	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187356180;1allele=C/T;version=Hapmap2;RS=rs821881914;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	191524414	191524513	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187356693;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191553307	191553406	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187429915;1allele=C/T;version=Hapmap2;RS=rs128826158;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191553710	191553809	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187430318;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191570473	191570572	.	+	.	Name=Starch;B73v2_pos=1:187379310;1allele=T/C;version=Hapmap2;RS=rs806186287;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191572688	191572787	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:187381525;1allele=T/A;version=Hapmap2;RS=rs276409222;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	191576657	191576756	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187385494;1allele=G/C;version=Hapmap2;RS=rs835815083;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	191576657	191576756	.	+	.	Name=Days_to_silk;B73v2_pos=1:187385494;1allele=G/C;version=Hapmap2;RS=rs835815083;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	191576663	191576762	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187385500;1allele=T/A;version=Hapmap2;RS=rs837892294;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191576677	191576776	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187385514;1allele=G/C;version=Hapmap2;RS=rs820797497;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	191576677	191576776	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187385514;1allele=G/C;version=Hapmap2;RS=rs820797497;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	191588211	191588310	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187397049;1allele=T/G;version=Hapmap2;RS=rs128826077;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	191588211	191588310	.	+	.	Name=Plant_height;B73v2_pos=1:187397049;1allele=T/G;version=Hapmap2;RS=rs128826077;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	191590385	191590484	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:187399222;1allele=A/G;version=Hapmap2;RS=rs128826097;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	191590726	191590825	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:187399559;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191592034	191592133	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187400867;1allele=T/A;version=Hapmap2;RS=rs276409259;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	191593568	191593667	.	+	.	Name=Plant_height;B73v2_pos=1:187402401;1allele=C/G;version=Hapmap2;RS=rs844962502;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	191809116	191809215	.	+	.	Name=Plant_height;B73v2_pos=1:187669707;1allele=C/G;version=Hapmap2;RS=rs819821596;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	191809780	191809879	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187670371;1allele=C/G;version=Hapmap2;RS=rs824775028;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	191810000	191810099	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:187670591;1allele=A/G;version=Hapmap2;RS=rs276409515;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	191810041	191810140	.	+	.	Name=Plant_height;B73v2_pos=1:187670632;1allele=T/C;version=Hapmap2;RS=rs128826447;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191854941	191855040	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187646471;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191856168	191856267	.	+	.	Name=Plant_height;B73v2_pos=1:187645245;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191857085	191857184	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187644328;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	191858136	191858235	.	+	.	Name=Ear_row_number;B73v2_pos=1:187643277;1allele=C/G;version=Hapmap1;RS=rs839264537;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	191859040	191859139	.	+	.	Name=Days_to_silk;B73v2_pos=1:187642373;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	192020902	192021001	.	+	.	Name=Tassel_length;B73v2_pos=1:187747122;1allele=T/C;version=Hapmap2;RS=rs844949307;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	192077726	192077825	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:187882598;1allele=C/G;version=Hapmap2;RS=rs276409885;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	192080541	192080640	.	+	.	Name=Days_to_silk;B73v2_pos=1:187885413;1allele=A/C;version=Hapmap1;RS=rs802888702;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	192080893	192080992	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:187885765;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	192157649	192157748	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:187920887;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	192178514	192178613	.	+	.	Name=Plant_height;B73v2_pos=1:187977720;1allele=G/A;version=Hapmap2;RS=rs128826804;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	192180822	192180921	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187980028;1allele=C/T;version=Hapmap2;RS=rs131825510;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192182146	192182245	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:187981352;1allele=C/G;version=Hapmap2;RS=rs276409980;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	192182775	192182874	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187981981;1allele=C/T;version=Hapmap2;RS=rs128826822;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192182775	192182874	.	+	.	Name=Ear_height;B73v2_pos=1:187981981;1allele=C/T;version=Hapmap2;RS=rs128826822;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192182874	192182973	.	+	.	Name=Ear_height;B73v2_pos=1:187982080;1allele=C/T;version=Hapmap2;RS=rs815172456;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192182874	192182973	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:187982080;1allele=C/T;version=Hapmap2;RS=rs815172456;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192214523	192214622	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188015093;1allele=C/T;version=Hapmap2;RS=rs131825530;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	192217242	192217341	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:188017812;1allele=C/G;version=Hapmap1;RS=rs131825548;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192217242	192217341	.	+	.	Name=Plant_height;B73v2_pos=1:188017812;1allele=C/G;version=Hapmap1;RS=rs131825548;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192226817	192226916	.	+	.	Name=Plant_height;B73v2_pos=1:188027389;1allele=A/T;version=Hapmap2;RS=rs725322037;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	192226817	192226916	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188027389;1allele=A/T;version=Hapmap2;RS=rs725322037;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	192226817	192226916	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:188027389;1allele=A/T;version=Hapmap2;RS=rs725322037;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	192226866	192226965	.	+	.	Name=Plant_height;B73v2_pos=1:188027438;1allele=C/G;version=Hapmap2;RS=rs131825620;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192232653	192232752	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:188033271;1allele=T/C;version=Hapmap2;RS=rs847154490;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	192265421	192265520	.	+	.	Name=Tassel_length;B73v2_pos=1:188063921;1allele=G/A;version=Hapmap2;RS=rs128827002;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	192268280	192268379	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:188066780;1allele=G/T;version=Hapmap2;RS=rs812694392;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	192268280	192268379	.	+	.	Name=Plant_height;B73v2_pos=1:188066780;1allele=G/T;version=Hapmap2;RS=rs812694392;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	192270504	192270603	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:188069004;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	192273116	192273215	.	+	.	Name=Plant_height;B73v2_pos=1:188071639;1allele=C/G;version=Hapmap2;RS=rs131825928;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192309938	192310037	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:188109709;1allele=G/C;version=Hapmap1;RS=rs131826005;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	192309938	192310037	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:188109709;1allele=G/C;version=Hapmap1;RS=rs131826005;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	192311742	192311841	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:188111513;1allele=G/A;version=Hapmap2;RS=rs276410283;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	192316570	192316669	.	+	.	Name=Tassel_length;B73v2_pos=1:188116341;1allele=G/A;version=Hapmap2;RS=rs827925443;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	192317548	192317647	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:188117319;1allele=A/C;version=Hapmap2;RS=rs131826068;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	192341479	192341578	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188142057;1allele=C/T;version=Hapmap2;RS=rs838502033;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	192491206	192491305	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188295480;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	192513195	192513294	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:188318954;1allele=C/A;version=Hapmap2;RS=rs802828023;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	192551814	192551913	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188350734;1allele=T/C;version=Hapmap2;RS=rs128827452;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192554172	192554271	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188353092;1allele=A/G;version=Hapmap2;RS=rs128827461;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	192557272	192557371	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188356192;1allele=G/A;version=Hapmap2;RS=rs128827473;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	192557344	192557443	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188356264;1allele=T/G;version=Hapmap2;RS=rs1061968789;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	192557955	192558054	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188356875;1allele=T/A;version=Hapmap2;RS=rs128827478;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	192570261	192570360	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188369181;1allele=G/T;version=Hapmap2;RS=rs1063587119;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	192571405	192571504	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188370329;1allele=A/G;version=Hapmap2;RS=rs1064434087;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	192578269	192578368	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188377196;1allele=G/A;version=Hapmap2;RS=rs276410559;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	192586823	192586922	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:188385751;1allele=A/T;version=Hapmap2;RS=rs276410604;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	192589086	192589185	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188388013;1allele=A/G;version=Hapmap2;RS=rs276410614;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	192589747	192589846	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:188388674;1allele=T/C;version=Hapmap2;RS=rs1061920617;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192589747	192589846	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188388674;1allele=T/C;version=Hapmap2;RS=rs1061920617;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	192593498	192593597	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188392425;1allele=A/G;version=Hapmap2;RS=rs276410624;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	192596045	192596144	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188394974;1allele=C/T;version=Hapmap2;RS=rs1064453802;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	192607147	192607246	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:188406077;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193045752	193045851	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:188842349;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193108554	193108653	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:188903727;1allele=G/T;version=Hapmap2;RS=rs131826446;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	193118384	193118483	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188954814;1allele=T/C;version=Hapmap2;RS=rs276411392;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	193147982	193148081	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:188935468;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193181214	193181313	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:188967198;1allele=G/T;version=Hapmap2;RS=rs840127411;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	193183093	193183192	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:188969077;1allele=C/T;version=Hapmap2;RS=rs816333759;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	193222288	193222387	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189009223;1allele=C/T;version=Hapmap2;RS=rs813243166;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	193260075	193260174	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:189047026;1allele=G/A;version=Hapmap2;RS=rs801413076;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	193292356	193292455	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:189081117;1allele=G/A;version=Hapmap2;RS=rs835554737;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	193406920	193407019	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189195920;1allele=C/T;version=Hapmap2;RS=rs1062189501;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	193407062	193407161	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:189196062;1allele=G/A;version=Hapmap2;RS=rs841889714;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	193411156	193411255	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:189200156;1allele=G/A;version=Hapmap2;RS=rs823157011;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	193533369	193533468	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189340058;1allele=G/A;version=Hapmap2;RS=rs1064750386;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	193540191	193540290	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:189346875;1allele=G/A;version=Hapmap2;RS=rs1061761048;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	193703842	193703941	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:189518101;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193752619	193752718	.	+	.	Name=Leaf_width;B73v2_pos=1:189557834;1allele=C/A;version=Hapmap2;RS=rs818313222;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	193794759	193794858	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:189599978;1allele=A/C;version=Hapmap2;RS=rs1062970271;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	193810390	193810489	.	+	.	Name=Ear_height;B73v2_pos=1:189624214;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193810424	193810523	.	+	.	Name=Ear_height;B73v2_pos=1:189624248;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193830723	193830822	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189636280;1allele=C/T;version=Hapmap2;RS=rs276412039;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	193837480	193837579	.	+	.	Name=Plant_height;B73v2_pos=1:189643037;1allele=G/T;version=Hapmap2;RS=rs831821758;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	193897715	193897814	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189670813;1allele=C/T;version=Hapmap2;RS=rs1062360137;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	193897766	193897865	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189670864;1allele=C/G;version=Hapmap2;RS=rs1062798876;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	193899132	193899230	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:189672230;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193899132	193899230	.	+	.	Name=Plant_height;B73v2_pos=1:189672230;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	193904660	193904759	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:189677763;1allele=C/T;version=Hapmap2;RS=rs835311303;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	193921473	193921572	.	+	.	Name=Plant_height;B73v2_pos=1:189686845;1allele=T/C;version=Hapmap2;RS=rs128829765;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	193927181	193927280	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189692740;1allele=C/T;version=Hapmap2;RS=rs834148010;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	193928187	193928286	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:189693746;1allele=G/A;version=Hapmap2;RS=rs802566206;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	194009809	194009895	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:189791058;1allele=G/T;version=Hapmap2;RS=rs276412170;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	194016194	194016293	.	+	.	Name=Tassel_length;B73v2_pos=1:189797171;1allele=/CCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	194016635	194016738	.	+	.	Name=Tassel_length;B73v2_pos=1:189797612;1allele=T/C;version=Hapmap2;RS=rs131827118;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	194033749	194033848	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:189815247;1allele=A/T;version=Hapmap2;RS=rs276412216;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	194055736	194055835	.	+	.	Name=Leaf_length;B73v2_pos=1:189837117;1allele=A/G;version=Hapmap2;RS=rs276412277;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	194092903	194093002	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:189874801;1allele=C/T;version=Hapmap2;RS=rs811068423;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	194186052	194186151	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:189969304;1allele=A/T;version=Hapmap2;RS=rs813324832;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	194259601	194259700	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:190043129;1allele=T/C;version=Hapmap2;RS=rs844088515;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	194443832	194443931	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:190210676;1allele=A/G;version=Hapmap2;RS=rs838764083;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	194444657	194444756	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:190211501;1allele=C/T;version=Hapmap2;RS=rs841536229;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	194682956	194683055	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190523242;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	194682956	194683055	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190523242;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	194693378	194693477	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190529171;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	194698777	194698876	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190534552;1allele=C/G;version=Hapmap1;RS=rs131827443;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	194698777	194698876	.	+	.	Name=Ear_height;B73v2_pos=1:190534552;1allele=C/G;version=Hapmap1;RS=rs131827443;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	194698777	194698876	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190534552;1allele=C/G;version=Hapmap1;RS=rs131827443;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	194698777	194698876	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:190534552;1allele=C/G;version=Hapmap1;RS=rs131827443;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	194698815	194698914	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190534590;1allele=T/G;version=Hapmap1;RS=rs131827445;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	194698899	194698998	.	+	.	Name=Ear_height;B73v2_pos=1:190534674;1allele=T/C;version=Hapmap2;RS=rs131827447;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	194737326	194737424	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190551169;1allele=T/C;version=Hapmap2;RS=rs276412779;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	194744476	194744575	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190558324;1allele=C/T;version=Hapmap2;RS=rs276412827;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	194794730	194794829	.	+	.	Name=Tassel_length;B73v2_pos=1:190610589;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	194848108	194848207	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:190636969;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	194876290	194876389	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190693238;1allele=C/T;version=Hapmap2;RS=rs1060555183;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	194883169	194883268	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190700117;1allele=G/T;version=Hapmap1;RS=rs128830954;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	194883290	194883389	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190700238;1allele=A/C;version=Hapmap2;RS=rs276412989;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	194883789	194883888	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190700737;1allele=G/T;version=Hapmap2;RS=rs131827641;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	194883789	194883888	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:190700737;1allele=G/T;version=Hapmap2;RS=rs131827641;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	194902095	194902194	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:190719062;1allele=T/A;version=Hapmap2;RS=rs832317351;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	194902129	194902228	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:190719096;1allele=G/A;version=Hapmap2;RS=rs812207054;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	194937453	194937552	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:190743628;1allele=C/A;version=Hapmap2;RS=rs846232722;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	194946854	194946953	.	+	.	Name=Tassel_length;B73v2_pos=1:190753025;1allele=C/A;version=Hapmap2;RS=rs128830852;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	195010426	195010525	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190784780;1allele=C/G;version=Hapmap2;RS=rs809895387;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	195044456	195044555	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:190832869;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195112524	195112623	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:190878285;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195124918	195125017	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190887138;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195126343	195126442	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:190885713;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195126400	195126499	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190885656;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195180519	195180618	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190961400;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195188500	195188599	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:190949534;1allele=G/A;version=Hapmap2;RS=rs1064459786;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	195191264	195191363	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190952298;1allele=C/T;version=Hapmap2;RS=rs276413183;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	195193643	195193742	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190954678;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195198319	195198418	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:190959354;1allele=T/C;version=Hapmap2;RS=rs276413203;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	195215052	195215151	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:190977460;1allele=A/C;version=Hapmap2;RS=rs276413229;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	195218754	195218853	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:190981162;1allele=G/T;version=Hapmap2;RS=rs276413278;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	195256110	195256209	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:191018134;1allele=T/C;version=Hapmap2;RS=rs808994106;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	195336663	195336762	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:191097539;1allele=T/C;version=Hapmap2;RS=rs131827761;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	195438964	195439063	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:191199854;1allele=C/T;version=Hapmap1;RS=rs131827806;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	195438982	195439081	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:191199872;1allele=G/A;version=Hapmap2;RS=rs131827809;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	195605031	195605130	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:191368048;1allele=G/C;version=Hapmap2;RS=rs808477867;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	195639505	195639604	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:191402530;1allele=T/C;version=Hapmap2;RS=rs823597733;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	195679277	195679376	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:191441604;1allele=C/T;version=Hapmap2;RS=rs834510932;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	195679666	195679765	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:191441993;1allele=C/T;version=Hapmap2;RS=rs826660139;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	195680584	195680683	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:191442911;1allele=A/G;version=Hapmap1;RS=rs131827951;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	195689033	195689132	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:191451365;1allele=C/T;version=Hapmap2;RS=rs817655981;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	195689156	195689255	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:191451488;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195735322	195735421	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:191496789;1allele=A/G;version=Hapmap2;RS=rs817820281;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	195739363	195739463	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:191500829;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	195751672	195751771	.	+	.	Name=Height_above_ear;B73v2_pos=1:191513138;1allele=C/A;version=Hapmap2;RS=rs131828019;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	195756623	195756722	.	+	.	Name=Ear_height;B73v2_pos=1:191518089;1allele=T/A;version=Hapmap2;RS=rs849392505;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	195761501	195761600	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:191522967;1allele=G/A;version=Hapmap1;RS=rs128831400;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	195764847	195764946	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:191526313;1allele=G/A;version=Hapmap2;RS=rs831324625;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	195796784	195796883	.	+	.	Name=Tassel_length;B73v2_pos=1:191558260;1allele=T/C;version=Hapmap2;RS=rs801775130;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	195822213	195822312	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:191582135;1allele=G/A;version=Hapmap2;RS=rs276413841;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	195858943	195859042	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:191618868;1allele=A/G;version=Hapmap2;RS=rs128831516;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	195862039	195862138	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:191621964;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	196050237	196050336	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:191803852;1allele=G/T;version=Hapmap2;RS=rs848437402;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	196106408	196106507	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:191860022;1allele=G/A;version=Hapmap1;RS=rs131828588;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	196106457	196106556	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:191860071;1allele=G/A;version=Hapmap2;RS=rs276414137;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	196111028	196111127	.	+	.	Name=Glutamate;B73v2_pos=1:191864642;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	196114224	196114323	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:191867838;1allele=G/C;version=Hapmap2;RS=rs276414161;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	196247323	196247422	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:191987528;1allele=G/A;version=Hapmap2;RS=rs837705479;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	196288856	196288955	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:192077024;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	196315708	196315807	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:192027864;1allele=-/+;version=Hapmap2;RS=rs805754132;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	196320100	196320199	.	+	.	Name=Ear_row_number;B73v2_pos=1:192032256;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	196328524	196328623	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:192041635;1allele=/CGGGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	196329197	196329296	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:192042308;1allele=G/C;version=Hapmap2;RS=rs276414337;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	196332930	196333029	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:192046041;1allele=G/C;version=Hapmap1;RS=rs131829065;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	196351742	196351841	.	+	.	Name=Height_above_ear;B73v2_pos=1:192104298;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	196421531	196421630	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:192152693;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	196441568	196441667	.	+	.	Name=Leaf_width;B73v2_pos=1:192171017;1allele=T/C;version=Hapmap2;RS=rs812672042;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	196483497	196483596	.	+	.	Name=Leaf_width;B73v2_pos=1:192212939;1allele=G/A;version=Hapmap2;RS=rs843483218;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	196667856	196667955	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:192399756;1allele=C/T;version=Hapmap1;RS=rs131829363;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	196699198	196699297	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:192431100;1allele=C/T;version=Hapmap2;RS=rs839630909;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	196996467	196996566	.	+	.	Name=Plant_height;B73v2_pos=1:192654642;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	197009598	197009697	.	+	.	Name=Height_above_ear;B73v2_pos=1:192667774;1allele=G/A;version=Hapmap1;RS=rs131829501;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	197022528	197022627	.	+	.	Name=Plant_height;B73v2_pos=1:192680710;1allele=G/A;version=Hapmap2;RS=rs276415228;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	197026153	197026252	.	+	.	Name=Plant_height;B73v2_pos=1:192684335;1allele=C/T;version=Hapmap2;RS=rs828390846;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	197039986	197040085	.	+	.	Name=Leaf_length;B73v2_pos=1:192698168;1allele=A/G;version=Hapmap2;RS=rs724774379;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	197217140	197217239	.	+	.	Name=Ear_height;B73v2_pos=1:192860515;1allele=T/C;version=Hapmap1;RS=rs131829615;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	197235107	197235206	.	+	.	Name=Ear_height;B73v2_pos=1:192879124;1allele=C/T;version=Hapmap2;RS=rs801695427;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	197236410	197236509	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:192880427;1allele=T/C;version=Hapmap2;RS=rs817111819;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	197308244	197308343	.	+	.	Name=Leaf_width;B73v2_pos=1:192968415;1allele=T/C;version=Hapmap2;RS=rs848026354;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	197408316	197408415	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:193072521;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	197529079	197529178	.	+	.	Name=Ear_row_number;B73v2_pos=1:193189777;1allele=T/C;version=Hapmap2;RS=rs1063167010;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	197529450	197529549	.	+	.	Name=Ear_row_number;B73v2_pos=1:193190148;1allele=A/G;version=Hapmap2;RS=rs1064705831;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	197588867	197588966	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:193248053;1allele=G/A;version=Hapmap2;RS=rs131829900;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	197595313	197595412	.	+	.	Name=Plant_height;B73v2_pos=1:193254499;1allele=T/G;version=Hapmap2;RS=rs832220322;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	197595313	197595412	.	+	.	Name=Ear_height;B73v2_pos=1:193254499;1allele=T/G;version=Hapmap2;RS=rs832220322;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	197642054	197642153	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:193306684;1allele=A/T;version=Hapmap2;RS=rs831891273;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	197856698	197856797	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:193523000;1allele=C/A;version=Hapmap2;RS=rs839358578;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	197929170	197929269	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:193591330;1allele=C/T;version=Hapmap1;RS=rs131830157;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	197938539	197938638	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:193600699;1allele=G/A;version=Hapmap1;RS=rs128832978;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	197938737	197938836	.	+	.	Name=Plant_height;B73v2_pos=1:193600897;1allele=C/T;version=Hapmap1;RS=rs128832979;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	197940301	197940400	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:193602461;1allele=G/A;version=Hapmap2;RS=rs844152072;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	198082360	198082459	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:193743305;1allele=C/T;version=Hapmap2;RS=rs839406231;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	198138762	198138861	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:193799181;1allele=T/C;version=Hapmap2;RS=rs836041728;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	198210404	198210503	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:193870811;1allele=T/C;version=Hapmap2;RS=rs835170088;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	198212275	198212374	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:193872682;1allele=A/G;version=Hapmap2;RS=rs128833294;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	198331928	198332027	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:193993676;1allele=C/T;version=Hapmap2;RS=rs846683236;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	198333812	198333911	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:193995560;1allele=G/C;version=Hapmap2;RS=rs1062517058;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	198396831	198396930	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:194054771;1allele=G/A;version=Hapmap2;RS=rs836696565;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	198499874	198499973	.	+	.	Name=Cob_diameter;B73v2_pos=1:194183150;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	198555081	198555180	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:194210149;1allele=G/A;version=Hapmap1;RS=rs131830555;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	198594814	198594913	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:194249885;1allele=C/T;version=Hapmap2;RS=rs845069021;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	198595492	198595591	.	+	.	Name=Ear_height;B73v2_pos=1:194250563;1allele=C/T;version=Hapmap2;RS=rs844984466;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	198763197	198763296	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:194445977;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	198775163	198775262	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:194434011;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	198776625	198776724	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:194432549;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	198819238	198819337	.	+	.	Name=Leaf_length;B73v2_pos=1:194393141;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	198843670	198843769	.	+	.	Name=Ear_height;B73v2_pos=1:194489138;1allele=T/G;version=Hapmap2;RS=rs842465440;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	198929852	198929951	.	+	.	Name=Ear_height;B73v2_pos=1:194575744;1allele=C/A;version=Hapmap1;RS=rs131830771;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	198929852	198929951	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:194575744;1allele=C/A;version=Hapmap2;RS=rs131830771;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	198930196	198930295	.	+	.	Name=Ear_height;B73v2_pos=1:194576088;1allele=G/C;version=Hapmap2;RS=rs128833923;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	198999901	199000000	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:194642432;1allele=C/A;version=Hapmap2;RS=rs823794879;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	199014499	199014598	.	+	.	Name=Leaf_length;B73v2_pos=1:194658449;1allele=G/A;version=Hapmap2;RS=rs131830802;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	199015836	199015935	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:194659786;1allele=A/T;version=Hapmap2;RS=rs131830828;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	199023089	199023188	.	+	.	Name=Ear_height;B73v2_pos=1:194667039;1allele=/AC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	199041104	199041203	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:194685054;1allele=CA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	199052096	199052195	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:194696425;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	199068984	199069083	.	+	.	Name=Plant_height;B73v2_pos=1:194725344;1allele=T/A;version=Hapmap2;RS=rs276417179;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	199068984	199069083	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:194725344;1allele=T/A;version=Hapmap2;RS=rs276417179;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	199068984	199069083	.	+	.	Name=Ear_height;B73v2_pos=1:194725344;1allele=T/A;version=Hapmap2;RS=rs276417179;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	199068985	199069084	.	+	.	Name=Ear_height;B73v2_pos=1:194725345;1allele=C/T;version=Hapmap2;RS=rs276417180;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	199081809	199081908	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:194738122;1allele=G/A;version=Hapmap2;RS=rs827934991;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	199081930	199082029	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:194738243;1allele=T/C;version=Hapmap2;RS=rs813297969;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	199160665	199160764	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:194816811;1allele=C/A;version=Hapmap2;RS=rs810714017;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	199189543	199189642	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:194846626;1allele=A/G;version=Hapmap2;RS=rs808769811;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	199280776	199280875	.	+	.	Name=Plant_height;B73v2_pos=1:194937261;1allele=T/A;version=Hapmap2;RS=rs276417405;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	199287315	199287414	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:194943800;1allele=G/C;version=Hapmap1;RS=rs131831380;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	199361428	199361527	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:195042447;1allele=G/A;version=Hapmap2;RS=rs128834434;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	199361937	199362036	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:195042956;1allele=T/A;version=Hapmap2;RS=rs830674490;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	199362972	199363071	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:195043991;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	199388616	199388715	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:195071649;1allele=G/A;version=Hapmap2;RS=rs847069827;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	199435904	199436003	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:195119829;1allele=A/C;version=Hapmap2;RS=rs842766048;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	199452237	199452336	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:195135984;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	199461062	199461161	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:195145946;1allele=A/G;version=Hapmap2;RS=rs804982078;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	199512469	199512568	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:195184931;1allele=G/T;version=Hapmap2;RS=rs834237772;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	199597389	199597488	.	+	.	Name=Cob_diameter;B73v2_pos=1:195269461;1allele=T/G;version=Hapmap2;RS=rs803772863;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	199619114	199619213	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:195295887;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	199620232	199620331	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:195294769;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	199727180	199727279	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:195400503;1allele=T/C;version=Hapmap1;RS=rs131831990;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	199742913	199743012	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:195416988;1allele=C/G;version=Hapmap2;RS=rs128834814;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	199743196	199743295	.	+	.	Name=Height_above_ear;B73v2_pos=1:195417271;1allele=G/T;version=Hapmap2;RS=rs834701678;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	199743676	199743775	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:195417751;1allele=C/A;version=Hapmap2;RS=rs1062751594;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	199976282	199976381	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:195649944;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200014204	200014303	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:195687673;1allele=G/A;version=Hapmap2;RS=rs128835261;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	200083051	200083150	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:195755320;1allele=C/T;version=Hapmap2;RS=rs810422561;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	200084464	200084563	.	+	.	Name=Leaf_width;B73v2_pos=1:195756733;1allele=C/T;version=Hapmap2;RS=rs804565664;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	200085370	200085469	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:195757639;1allele=C/T;version=Hapmap2;RS=rs727112416;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	200105845	200105944	.	+	.	Name=Cob_diameter;B73v2_pos=1:195777086;1allele=+/-;version=Hapmap2;RS=rs834614486;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	200106002	200106101	.	+	.	Name=Cob_diameter;B73v2_pos=1:195777243;1allele=G/A;version=Hapmap2;RS=rs276418365;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	200170734	200170833	.	+	.	Name=Height_above_ear;B73v2_pos=1:195844248;1allele=A/G;version=Hapmap2;RS=rs276418429;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	200350290	200350389	.	+	.	Name=Leaf_width;B73v2_pos=1:196033695;1allele=A/G;version=Hapmap2;RS=rs844472123;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	200524133	200524232	.	+	.	Name=Ear_height;B73v2_pos=1:196203515;1allele=C/T;version=Hapmap1;RS=rs131832752;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	200532491	200532590	.	+	.	Name=Plant_height;B73v2_pos=1:196211873;1allele=C/A;version=Hapmap2;RS=rs128836019;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	200532635	200532734	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:196212017;1allele=G/A;version=Hapmap2;RS=rs815157769;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	200532873	200532972	.	+	.	Name=Ear_height;B73v2_pos=1:196212255;1allele=C/T;version=Hapmap2;RS=rs128836023;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	200533634	200533733	.	+	.	Name=Plant_height;B73v2_pos=1:196213016;1allele=A/G;version=Hapmap2;RS=rs726813748;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	200533634	200533733	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:196213016;1allele=A/G;version=Hapmap2;RS=rs726813748;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	200533747	200533846	.	+	.	Name=Plant_height;B73v2_pos=1:196213129;1allele=/TGCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200534590	200534689	.	+	.	Name=Plant_height;B73v2_pos=1:196213972;1allele=T/C;version=Hapmap1;RS=rs131832805;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	200534590	200534689	.	+	.	Name=Ear_height;B73v2_pos=1:196213972;1allele=T/C;version=Hapmap1;RS=rs131832805;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	200534590	200534689	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:196213972;1allele=T/C;version=Hapmap1;RS=rs131832805;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	200535079	200535178	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:196214461;1allele=/AAA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200565405	200565504	.	+	.	Name=Plant_height;B73v2_pos=1:196245776;1allele=C/A;version=Hapmap2;RS=rs128836086;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	200570300	200570399	.	+	.	Name=Height_above_ear;B73v2_pos=1:196250671;1allele=C/T;version=Hapmap2;RS=rs276418978;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	200570397	200570496	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:196250768;1allele=T/C;version=Hapmap2;RS=rs848314659;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	200570692	200570791	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:196251063;1allele=T/C;version=Hapmap2;RS=rs128836107;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	200570692	200570791	.	+	.	Name=Plant_height;B73v2_pos=1:196251063;1allele=T/C;version=Hapmap2;RS=rs128836107;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	200588230	200588329	.	+	.	Name=Leaf_width;B73v2_pos=1:196269030;1allele=A/G;version=Hapmap2;RS=rs822298037;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	200625387	200625486	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:196306094;1allele=C/T;version=Hapmap2;RS=rs805721476;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	200627531	200627630	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:196306976;1allele=A/T;version=Hapmap1;RS=rs128836300;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	200661856	200661955	.	+	.	Name=Leaf_width;B73v2_pos=1:196341938;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200662431	200662530	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:196341363;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200662785	200662884	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:196341009;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200700660	200700759	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:196382279;1allele=G/A;version=Hapmap2;RS=rs725958125;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	200705022	200705121	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:196386641;1allele=T/A;version=Hapmap2;RS=rs817221331;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	200722457	200722556	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:196399225;1allele=G/A;version=Hapmap2;RS=rs276419199;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	200739903	200740002	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:196417134;1allele=G/A;version=Hapmap2;RS=rs131832984;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	200749682	200749781	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:196426913;1allele=T/C;version=Hapmap2;RS=rs128836458;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	200754900	200754999	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:196432131;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200754900	200754999	.	+	.	Name=Plant_height;B73v2_pos=1:196432131;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200758419	200758518	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:196435650;1allele=G/A;version=Hapmap1;RS=rs131833056;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	200759018	200759117	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:196436249;1allele=G/C;version=Hapmap2;RS=rs824619416;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	200819742	200819841	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:196503227;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	200934362	200934461	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:196589699;1allele=G/A;version=Hapmap2;RS=rs833931479;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	201130640	201130739	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:196771582;1allele=A/G;version=Hapmap2;RS=rs1064720337;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	201273115	201273214	.	+	.	Name=Cob_diameter;B73v2_pos=1:196914079;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	201334872	201334971	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:196976108;1allele=C/T;version=Hapmap2;RS=rs849839179;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	201431811	201431910	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:197070153;1allele=A/G;version=Hapmap2;RS=rs850180832;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	201601141	201601240	.	+	.	Name=Cob_diameter;B73v2_pos=1:197259479;1allele=T/G;version=Hapmap2;RS=rs832907862;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	201601339	201601438	.	+	.	Name=Cob_diameter;B73v2_pos=1:197259677;1allele=T/C;version=Hapmap2;RS=rs830010676;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	201616818	201616917	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:197275156;1allele=C/T;version=Hapmap2;RS=rs809438146;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	201722773	201722872	.	+	.	Name=Plant_height;B73v2_pos=1:197387300;1allele=A/G;version=Hapmap1;RS=rs131833921;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	201886878	201886977	.	+	.	Name=Plant_height;B73v2_pos=1:197543916;1allele=G/A;version=Hapmap2;RS=rs850184950;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	201886878	201886977	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:197543916;1allele=G/A;version=Hapmap2;RS=rs850184950;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	201953881	201953980	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:197663852;1allele=C/T;version=Hapmap2;RS=rs276420841;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	202053057	202053156	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:197709228;1allele=C/T;version=Hapmap2;RS=rs813555264;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	202133217	202133316	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:197785319;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	202543997	202544096	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:198195062;1allele=G/C;version=Hapmap1;RS=rs131834646;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	202544523	202544622	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:198195588;1allele=T/G;version=Hapmap2;RS=rs276421285;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	202547388	202547487	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:198198453;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	202547474	202547573	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:198198539;1allele=T/C;version=Hapmap1;RS=rs128838897;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	202682527	202682626	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:198323012;1allele=G/T;version=Hapmap1;RS=rs131834931;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	202714779	202714878	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:198355265;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	203090455	203090554	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:198739635;1allele=C/G;version=Hapmap2;RS=rs131835308;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	203166268	203166367	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:198809334;1allele=A/C;version=Hapmap1;RS=rs725174172;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	203185850	203185949	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:198828853;1allele=C/G;version=Hapmap2;RS=rs831420899;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	203236141	203236240	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:198877459;1allele=G/A;version=Hapmap2;RS=rs128840479;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	203385753	203385852	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:199095912;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	203417873	203417972	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:199106126;1allele=TT/;version=Hapmap1;RS=rs131835672;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	203436634	203436733	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:199034136;1allele=A/T;version=Hapmap2;RS=rs846244970;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	203475293	203475392	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:199072387;1allele=G/C;version=Hapmap1;RS=rs128840711;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	203480105	203480204	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:199077199;1allele=C/T;version=Hapmap2;RS=rs823817538;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	203480205	203480304	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:199077299;1allele=A/G;version=Hapmap2;RS=rs276422537;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	203555914	203556013	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:199206934;1allele=A/G;version=Hapmap2;RS=rs1061649739;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	203577526	203577625	.	+	.	Name=Leaf_width;B73v2_pos=1:199228547;1allele=G/T;version=Hapmap2;RS=rs848288800;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	203841015	203841114	.	+	.	Name=Leaf_width;B73v2_pos=1:199490470;1allele=G/T;version=Hapmap2;RS=rs128841230;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	203853807	203853906	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:199501914;1allele=C/T;version=Hapmap1;RS=rs131836213;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	203855613	203855712	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:199503720;1allele=C/T;version=Hapmap2;RS=rs830406471;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	203970548	203970647	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:199618668;1allele=A/G;version=Hapmap2;RS=rs128841384;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	203979606	203979705	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:199627725;1allele=C/T;version=Hapmap2;RS=rs843256154;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	204005418	204005517	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:199653538;1allele=A/T;version=Hapmap2;RS=rs128841608;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	204005717	204005816	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:199653837;1allele=/CCGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	204040173	204040272	.	+	.	Name=Ear_height;B73v2_pos=1:199688506;1allele=A/C;version=Hapmap2;RS=rs276423410;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	204072414	204072513	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:199740267;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	204079561	204079660	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:199747414;1allele=T/G;version=Hapmap2;RS=rs813634980;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	204187163	204187262	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:199838262;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	204187464	204187563	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:199838563;1allele=A/G;version=Hapmap2;RS=rs825800713;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	204240886	204240985	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:199894118;1allele=A/G;version=Hapmap2;RS=rs847568815;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	204311825	204311924	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:199953649;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	204352826	204352925	.	+	.	Name=Ear_row_number;B73v2_pos=1:200008876;1allele=G/C;version=Hapmap2;RS=rs131837082;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	204352841	204352940	.	+	.	Name=Ear_row_number;B73v2_pos=1:200008891;1allele=C/G;version=Hapmap2;RS=rs816581809;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	204438946	204439045	.	+	.	Name=Ear_height;B73v2_pos=1:200071408;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	204445376	204445475	.	+	.	Name=Fumarate;B73v2_pos=1:200077838;1allele=G/A;version=Hapmap2;RS=rs838754056;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	204521034	204521133	.	+	.	Name=Cob_diameter;B73v2_pos=1:200159856;1allele=A/G;version=Hapmap1;RS=rs131837296;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	204524071	204524170	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:200162893;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	204574419	204574518	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:200251752;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	204773567	204773666	.	+	.	Name=Cob_diameter;B73v2_pos=1:200408956;1allele=T/C;version=Hapmap2;RS=rs128842456;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	204784058	204784157	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:200419447;1allele=C/T;version=Hapmap2;RS=rs849327052;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	204889095	204889194	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:200500090;1allele=C/T;version=Hapmap1;RS=rs131837603;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	204936116	204936215	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:200559910;1allele=C/A;version=Hapmap1;RS=rs131837623;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	204936117	204936216	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:200559911;1allele=G/T;version=Hapmap2;RS=rs822754310;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	205004616	205004715	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:200628075;1allele=A/G;version=Hapmap2;RS=rs276425062;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	205005723	205005822	.	+	.	Name=Ear_height;B73v2_pos=1:200629182;1allele=/GCAGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	205007542	205007641	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:200631001;1allele=/GTGCAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	205007542	205007641	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:200631001;1allele=/GTGCAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	205007674	205007773	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:200631133;1allele=C/A;version=Hapmap1;RS=rs131837735;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	205066593	205066692	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:200690491;1allele=C/T;version=Hapmap2;RS=rs819355829;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	205072785	205072884	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:200696683;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	205072904	205073003	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:200696802;1allele=T/C;version=Hapmap2;RS=rs808170134;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	205074017	205074116	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:200697915;1allele=A/G;version=Hapmap2;RS=rs818905925;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	205102092	205102191	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:200725994;1allele=GTGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	205102217	205102316	.	+	.	Name=Height_above_ear;B73v2_pos=1:200726119;1allele=A/G;version=Hapmap1;RS=rs128842853;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	205206343	205206442	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:200831814;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	205207208	205207307	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:200832679;1allele=C/T;version=Hapmap2;RS=rs128842892;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	205230239	205230338	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:200859597;1allele=G/A;version=Hapmap1;RS=rs131838132;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	205230521	205230620	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:200859879;1allele=C/T;version=Hapmap2;RS=rs131838140;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	205230793	205230892	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:200860151;1allele=A/G;version=Hapmap1;RS=rs131838148;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	205269774	205269873	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:200899317;1allele=A/G;version=Hapmap2;RS=rs128843062;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	205282876	205282975	.	+	.	Name=Plant_height;B73v2_pos=1:200912409;1allele=C/-;version=Hapmap1;RS=rs131838273;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	205551661	205551760	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:201168880;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	205564418	205564517	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:201181638;1allele=T/C;version=Hapmap2;RS=rs128843514;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	205679890	205679989	.	+	.	Name=Cob_diameter;B73v2_pos=1:201295253;1allele=G/A;version=Hapmap2;RS=rs832862053;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	205782425	205782524	.	+	.	Name=Cob_diameter;B73v2_pos=1:201396271;1allele=G/A;version=Hapmap2;RS=rs810391324;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	205787836	205787935	.	+	.	Name=Cob_diameter;B73v2_pos=1:201401663;1allele=G/A;version=Hapmap2;RS=rs835056711;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	205906566	205906665	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:201521494;1allele=G/A;version=Hapmap2;RS=rs128844128;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	206053335	206053434	.	+	.	Name=Ear_height;B73v2_pos=1:201667794;1allele=G/A;version=Hapmap2;RS=rs837762913;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	206054071	206054170	.	+	.	Name=Ear_height;B73v2_pos=1:201668530;1allele=G/C;version=Hapmap2;RS=rs814408836;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	206102945	206103044	.	+	.	Name=Ear_height;B73v2_pos=1:201717363;1allele=G/A;version=Hapmap2;RS=rs822394130;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	206161305	206161404	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:201781225;1allele=C/A;version=Hapmap2;RS=rs823003239;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	206222222	206222321	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:201841709;1allele=C/G;version=Hapmap2;RS=rs823839549;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	206266788	206266887	.	+	.	Name=Plant_height;B73v2_pos=1:201906510;1allele=A/G;version=Hapmap2;RS=rs821888599;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	206317209	206317308	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:201873097;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206317685	206317784	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:201873573;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206337215	206337314	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:201957480;1allele=C/T;version=Hapmap2;RS=rs131838752;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	206338512	206338611	.	+	.	Name=Ear_height;B73v2_pos=1:201958777;1allele=GCT/;version=Hapmap1;RS=rs804199182;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	206365985	206366084	.	+	.	Name=Ear_height;B73v2_pos=1:202024982;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206419169	206419268	.	+	.	Name=Ear_height;B73v2_pos=1:201972853;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206419935	206420034	.	+	.	Name=Ear_height;B73v2_pos=1:201972087;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206428404	206428503	.	+	.	Name=Plant_height;B73v2_pos=1:202043893;1allele=A/C;version=Hapmap2;RS=rs801840566;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	206439819	206439918	.	+	.	Name=Ear_height;B73v2_pos=1:202055858;1allele=T/C;version=Hapmap2;RS=rs837386009;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	206439819	206439918	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:202055858;1allele=T/C;version=Hapmap2;RS=rs837386009;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	206456394	206456493	.	+	.	Name=Ear_row_number;B73v2_pos=1:202072437;1allele=A/C;version=Hapmap2;RS=rs822152844;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	206469259	206469358	.	+	.	Name=Ear_height;B73v2_pos=1:202085309;1allele=C/T;version=Hapmap1;RS=rs131838875;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	206469259	206469358	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:202085309;1allele=C/T;version=Hapmap1;RS=rs131838875;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	206470183	206470282	.	+	.	Name=Ear_row_number;B73v2_pos=1:202086233;1allele=T/C;version=Hapmap2;RS=rs843466765;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	206558502	206558601	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:202169853;1allele=C/T;version=Hapmap2;RS=rs131839049;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	206624747	206624846	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:202307424;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206629394	206629493	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:202302777;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206630968	206631067	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:202301203;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206856882	206856981	.	+	.	Name=Ear_row_number;B73v2_pos=1:202466351;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	206983066	206983165	.	+	.	Name=Total_amino_acids;B73v2_pos=1:202603556;1allele=A/G;version=Hapmap2;RS=rs131839526;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	207689886	207689985	.	+	.	Name=Ear_height;B73v2_pos=1:203054904;1allele=A/G;version=Hapmap2;RS=rs845205833;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	207737071	207737170	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:203082721;1allele=C/T;version=Hapmap2;RS=rs840998145;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	207737980	207738079	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:203083630;1allele=T/C;version=Hapmap2;RS=rs827099971;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	207739462	207739561	.	+	.	Name=Ear_height;B73v2_pos=1:203085111;1allele=C/G;version=Hapmap2;RS=rs838944035;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	207740733	207740832	.	+	.	Name=Ear_row_number;B73v2_pos=1:203086382;1allele=A/G;version=Hapmap2;RS=rs836223373;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	207740751	207740850	.	+	.	Name=Ear_row_number;B73v2_pos=1:203086400;1allele=A/T;version=Hapmap2;RS=rs821085695;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	207740817	207740916	.	+	.	Name=Ear_row_number;B73v2_pos=1:203086466;1allele=G/A;version=Hapmap2;RS=rs838020501;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	207740874	207740973	.	+	.	Name=Ear_row_number;B73v2_pos=1:203086523;1allele=G/C;version=Hapmap2;RS=rs812104027;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	207741093	207741192	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:203086742;1allele=G/A;version=Hapmap2;RS=rs1061392847;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	207741479	207741578	.	+	.	Name=Ear_row_number;B73v2_pos=1:203087128;1allele=G/T;version=Hapmap2;RS=rs821841215;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	207742044	207742143	.	+	.	Name=Ear_row_number;B73v2_pos=1:203087693;1allele=C/T;version=Hapmap2;RS=rs131839606;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	207765286	207765385	.	+	.	Name=Ear_height;B73v2_pos=1:203124320;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	207805562	207805661	.	+	.	Name=Plant_height;B73v2_pos=1:203167219;1allele=G/A;version=Hapmap2;RS=rs727432732;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	207812817	207812916	.	+	.	Name=Cob_diameter;B73v2_pos=1:203174474;1allele=C/G;version=Hapmap1;RS=rs823563345;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	207977770	207977869	.	+	.	Name=Ear_row_number;B73v2_pos=1:203344648;1allele=G/T;version=Hapmap2;RS=rs128846587;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	208051371	208051470	.	+	.	Name=Height_above_ear;B73v2_pos=1:203415490;1allele=G/A;version=Hapmap2;RS=rs806421493;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	208081502	208081601	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:203446515;1allele=A/G;version=Hapmap2;RS=rs128846765;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	208081502	208081601	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:203446515;1allele=A/G;version=Hapmap2;RS=rs128846765;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	208156012	208156111	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:203521020;1allele=T/C;version=Hapmap2;RS=rs724351587;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	208164943	208165042	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:203529951;1allele=G/A;version=Hapmap2;RS=rs276430361;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	208212460	208212559	.	+	.	Name=Nitrate;B73v2_pos=1:203577470;1allele=G/A;version=Hapmap2;RS=rs128847177;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	208250329	208250428	.	+	.	Name=Total_amino_acids;B73v2_pos=1:203615343;1allele=C/T;version=Hapmap2;RS=rs846259237;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	208262172	208262271	.	+	.	Name=Total_amino_acids;B73v2_pos=1:203627186;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	208262294	208262393	.	+	.	Name=Total_amino_acids;B73v2_pos=1:203627308;1allele=A/G;version=Hapmap2;RS=rs128847407;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	208288654	208288753	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:203653934;1allele=C/G;version=Hapmap2;RS=rs836117252;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	208295128	208295227	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:203660408;1allele=G/C;version=Hapmap2;RS=rs835841277;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	208336236	208336335	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:203702496;1allele=C/T;version=Hapmap2;RS=rs839612063;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	208355101	208355200	.	+	.	Name=Nitrate;B73v2_pos=1:203721294;1allele=G/A;version=Hapmap2;RS=rs816121095;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	208367615	208367714	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:203733056;1allele=G/C;version=Hapmap2;RS=rs824532744;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	208384762	208384861	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:203750206;1allele=A/G;version=Hapmap2;RS=rs835887845;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	208462050	208462149	.	+	.	Name=Nitrate;B73v2_pos=1:203829070;1allele=C/T;version=Hapmap2;RS=rs842328576;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	208500253	208500352	.	+	.	Name=Nitrate;B73v2_pos=1:203867990;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	208671497	208671596	.	+	.	Name=Ear_row_number;B73v2_pos=1:203950261;1allele=T/C;version=Hapmap2;RS=rs837308996;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	208711844	208711943	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:204088176;1allele=A/G;version=Hapmap2;RS=rs1064433604;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	208713204	208713303	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:204089536;1allele=G/A;version=Hapmap2;RS=rs808811591;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	208724485	208724584	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:204100728;1allele=C/A;version=Hapmap2;RS=rs808023335;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	208725193	208725292	.	+	.	Name=Ear_row_number;B73v2_pos=1:204101436;1allele=T/G;version=Hapmap2;RS=rs276431480;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	208725682	208725781	.	+	.	Name=Ear_height;B73v2_pos=1:204101925;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	208733685	208733784	.	+	.	Name=Ear_row_number;B73v2_pos=1:204109930;1allele=A/G;version=Hapmap2;RS=rs830225883;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	208733740	208733839	.	+	.	Name=Ear_row_number;B73v2_pos=1:204109985;1allele=A/G;version=Hapmap2;RS=rs128847978;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	208746851	208746950	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:204069652;1allele=A/G;version=Hapmap1;RS=rs821416164;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	208747166	208747265	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:204069337;1allele=G/T;version=Hapmap1;RS=rs131840317;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	208749982	208750081	.	+	.	Name=Ear_height;B73v2_pos=1:204066521;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	208801970	208802069	.	+	.	Name=Ear_height;B73v2_pos=1:204292074;1allele=G/A;version=Hapmap2;RS=rs131840408;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	208840277	208840376	.	+	.	Name=Ear_row_number;B73v2_pos=1:204179953;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	208863064	208863163	.	+	.	Name=Total_amino_acids;B73v2_pos=1:204209844;1allele=C/T;version=Hapmap2;RS=rs276431595;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	208863684	208863783	.	+	.	Name=Leaf_width;B73v2_pos=1:204210464;1allele=G/A;version=Hapmap2;RS=rs845492310;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	208868298	208868397	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:204215078;1allele=C/T;version=Hapmap2;RS=rs840861467;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	208906210	208906309	.	+	.	Name=Plant_height;B73v2_pos=1:204247929;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	208921300	208921399	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:204262904;1allele=G/T;version=Hapmap2;RS=rs821194869;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	208960782	208960881	.	+	.	Name=Height_above_ear;B73v2_pos=1:204318446;1allele=C/A;version=Hapmap2;RS=rs803292879;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	209005939	209006038	.	+	.	Name=Ear_height;B73v2_pos=1:204361517;1allele=T/A;version=Hapmap2;RS=rs810979175;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	209008099	209008198	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:204363677;1allele=G/T;version=Hapmap2;RS=rs833868044;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	209168084	209168183	.	+	.	Name=Cob_diameter;B73v2_pos=1:204509677;1allele=G/T;version=Hapmap2;RS=rs276432002;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	209169510	209169609	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:204511103;1allele=A/G;version=Hapmap2;RS=rs128848332;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	209215042	209215141	.	+	.	Name=Leaf_width;B73v2_pos=1:204556646;1allele=A/G;version=Hapmap2;RS=rs1064016076;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	209240851	209240950	.	+	.	Name=Plant_height;B73v2_pos=1:204582484;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209240851	209240950	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:204582484;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209240851	209240950	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:204582484;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209309449	209309548	.	+	.	Name=Plant_height;B73v2_pos=1:204612534;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209457924	209458023	.	+	.	Name=Nitrate;B73v2_pos=1:204809475;1allele=C/T;version=Hapmap2;RS=rs811915315;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	209749832	209749931	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:205102512;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209754245	209754344	.	+	.	Name=Nitrate;B73v2_pos=1:205098099;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209768715	209768814	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:205083629;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209779425	209779524	.	+	.	Name=Nitrate;B73v2_pos=1:205134230;1allele=C/T;version=Hapmap2;RS=rs844709884;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	209812658	209812757	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:205185044;1allele=C/T;version=Hapmap2;RS=rs849643218;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	209883791	209883890	.	+	.	Name=Leaf_length;B73v2_pos=1:205250161;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	209927592	209927691	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:205294103;1allele=A/C;version=Hapmap2;RS=rs847930263;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	210003231	210003330	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:205370084;1allele=C/T;version=Hapmap2;RS=rs725804568;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210044070	210044169	.	+	.	Name=Ear_height;B73v2_pos=1:205410765;1allele=C/T;version=Hapmap2;RS=rs128849593;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210047599	210047698	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:205414294;1allele=T/C;version=Hapmap2;RS=rs809851952;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	210052009	210052108	.	+	.	Name=Total_amino_acids;B73v2_pos=1:205418704;1allele=G/A;version=Hapmap2;RS=rs807665590;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210071674	210071773	.	+	.	Name=Nitrate;B73v2_pos=1:205438369;1allele=G/A;version=Hapmap2;RS=rs828525013;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210119714	210119813	.	+	.	Name=Nitrate;B73v2_pos=1:205490390;1allele=G/A;version=Hapmap2;RS=rs818186122;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210162270	210162369	.	+	.	Name=Ear_row_number;B73v2_pos=1:205532888;1allele=G/C;version=Hapmap1;RS=rs131841158;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	210202310	210202409	.	+	.	Name=Ear_height;B73v2_pos=1:205572932;1allele=G/T;version=Hapmap2;RS=rs844573688;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	210202654	210202753	.	+	.	Name=Ear_row_number;B73v2_pos=1:205573276;1allele=G/A;version=Hapmap2;RS=rs804993192;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210202675	210202774	.	+	.	Name=Ear_row_number;B73v2_pos=1:205573297;1allele=T/C;version=Hapmap2;RS=rs825799780;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	210208337	210208436	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:205578959;1allele=A/G;version=Hapmap2;RS=rs823615293;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	210343339	210343438	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:205716805;1allele=C/T;version=Hapmap2;RS=rs817324983;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210343482	210343581	.	+	.	Name=Height_above_ear;B73v2_pos=1:205716948;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	210343509	210343608	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:205716975;1allele=A/G;version=Hapmap2;RS=rs809457558;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	210343692	210343791	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:205717158;1allele=C/T;version=Hapmap2;RS=rs128850300;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210354116	210354215	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:205727581;1allele=G/A;version=Hapmap2;RS=rs809707797;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210354116	210354215	.	+	.	Name=Height_above_ear;B73v2_pos=1:205727581;1allele=G/A;version=Hapmap2;RS=rs809707797;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210354177	210354276	.	+	.	Name=Height_above_ear;B73v2_pos=1:205727642;1allele=C/G;version=Hapmap2;RS=rs845952896;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	210359288	210359387	.	+	.	Name=Height_above_ear;B73v2_pos=1:205732753;1allele=C/T;version=Hapmap2;RS=rs850422658;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210370121	210370220	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:205737503;1allele=T/A;version=Hapmap2;RS=rs840464907;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	210370121	210370220	.	+	.	Name=Height_above_ear;B73v2_pos=1:205737503;1allele=T/A;version=Hapmap2;RS=rs840464907;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	210395225	210395324	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:205762613;1allele=G/A;version=Hapmap2;RS=rs128850494;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210535235	210535334	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:205896137;1allele=G/A;version=Hapmap2;RS=rs812119917;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210676258	210676357	.	+	.	Name=Ear_height;B73v2_pos=1:206037086;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	210698237	210698336	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:206059203;1allele=C/T;version=Hapmap2;RS=rs128851090;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210726724	210726823	.	+	.	Name=Ear_height;B73v2_pos=1:206086588;1allele=G/A;version=Hapmap2;RS=rs843660790;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210745276	210745375	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:206105140;1allele=G/A;version=Hapmap2;RS=rs845037512;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210745276	210745375	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:206105140;1allele=G/A;version=Hapmap2;RS=rs845037512;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210756760	210756859	.	+	.	Name=Ear_height;B73v2_pos=1:206116544;1allele=G/A;version=Hapmap2;RS=rs806498021;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210768637	210768736	.	+	.	Name=Ear_row_number;B73v2_pos=1:206128421;1allele=A/G;version=Hapmap2;RS=rs128851434;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	210793267	210793366	.	+	.	Name=Total_amino_acids;B73v2_pos=1:206152746;1allele=C/G;version=Hapmap2;RS=rs828416044;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	210793562	210793661	.	+	.	Name=Total_amino_acids;B73v2_pos=1:206153041;1allele=G/C;version=Hapmap2;RS=rs801538725;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	210794704	210794803	.	+	.	Name=Ear_row_number;B73v2_pos=1:206154183;1allele=C/T;version=Hapmap2;RS=rs276434706;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210800627	210800726	.	+	.	Name=Total_amino_acids;B73v2_pos=1:206160106;1allele=C/T;version=Hapmap1;RS=rs131841560;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	210905592	210905691	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:206259119;1allele=G/A;version=Hapmap2;RS=rs276434829;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	210955810	210955909	.	+	.	Name=Fumarate;B73v2_pos=1:206315837;1allele=A/T;version=Hapmap2;RS=rs128851891;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	210971469	210971568	.	+	.	Name=Fumarate;B73v2_pos=1:206331482;1allele=T/C;version=Hapmap2;RS=rs276435180;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	211163404	211163503	.	+	.	Name=Height_above_ear;B73v2_pos=1:206522224;1allele=G/T;version=Hapmap2;RS=rs840686635;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	211201599	211201698	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:206559545;1allele=C/T;version=Hapmap2;RS=rs822131441;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	211215972	211216071	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:206573493;1allele=C/A;version=Hapmap2;RS=rs811751070;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	211408205	211408304	.	+	.	Name=Tassel_length;B73v2_pos=1:206760888;1allele=T/C;version=Hapmap2;RS=rs844709013;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	211439731	211439830	.	+	.	Name=Plant_height;B73v2_pos=1:206792371;1allele=C/G;version=Hapmap2;RS=rs822920400;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	211439731	211439830	.	+	.	Name=Ear_height;B73v2_pos=1:206792371;1allele=C/G;version=Hapmap2;RS=rs822920400;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	211441730	211441829	.	+	.	Name=Plant_height;B73v2_pos=1:206794370;1allele=A/G;version=Hapmap1;RS=rs131842173;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	211472702	211472801	.	+	.	Name=Plant_height;B73v2_pos=1:206824407;1allele=A/C;version=Hapmap2;RS=rs843532862;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	211532631	211532730	.	+	.	Name=Height_above_ear;B73v2_pos=1:206856251;1allele=C/T;version=Hapmap2;RS=rs809244603;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	211575931	211576030	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:206968325;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	211677461	211677560	.	+	.	Name=Ear_height;B73v2_pos=1:207047311;1allele=T/A;version=Hapmap2;RS=rs844609374;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	211677571	211677670	.	+	.	Name=Plant_height;B73v2_pos=1:207047421;1allele=A/G;version=Hapmap2;RS=rs836773484;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	211682865	211682964	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:207052716;1allele=A/T;version=Hapmap2;RS=rs846596593;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	211750492	211750591	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:207120838;1allele=C/T;version=Hapmap1;RS=rs131842411;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	211805853	211805952	.	+	.	Name=Height_above_ear;B73v2_pos=1:207176329;1allele=T/A;version=Hapmap2;RS=rs818753212;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	212131298	212131397	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:207500526;1allele=G/A;version=Hapmap2;RS=rs824861657;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	212160465	212160564	.	+	.	Name=Days_to_silk;B73v2_pos=1:207529320;1allele=A/T;version=Hapmap2;RS=rs820536042;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	212286177	212286276	.	+	.	Name=Total_amino_acids;B73v2_pos=1:207625449;1allele=+/-;version=Hapmap2;RS=rs819368747;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	212378617	212378716	.	+	.	Name=Total_amino_acids;B73v2_pos=1:207724443;1allele=T/C;version=Hapmap1;RS=rs276437225;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	212378952	212379051	.	+	.	Name=Total_amino_acids;B73v2_pos=1:207724778;1allele=G/A;version=Hapmap1;RS=rs131843216;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	212383443	212383542	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:207729213;1allele=T/A;version=Hapmap2;RS=rs828236064;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	212402379	212402478	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:207748279;1allele=G/T;version=Hapmap2;RS=rs805447626;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	212527173	212527272	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:207867309;1allele=A/T;version=Hapmap2;RS=rs802751573;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	212527182	212527281	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:207867318;1allele=T/A;version=Hapmap2;RS=rs840546832;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	212561492	212561591	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:207900322;1allele=G/C;version=Hapmap2;RS=rs815573604;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	212933187	212933286	.	+	.	Name=Total_amino_acids;B73v2_pos=1:208171275;1allele=C/T;version=Hapmap2;RS=rs816473509;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	212945041	212945140	.	+	.	Name=Ear_row_number;B73v2_pos=1:208183125;1allele=G/C;version=Hapmap2;RS=rs806591776;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	213085544	213085643	.	+	.	Name=Leaf_width;B73v2_pos=1:208317112;1allele=A/C;version=Hapmap2;RS=rs804060747;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	213240286	213240385	.	+	.	Name=Leaf_width;B73v2_pos=1:208471628;1allele=C/G;version=Hapmap2;RS=rs807975391;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	213296983	213297082	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:208529422;1allele=G/C;version=Hapmap1;RS=rs128855224;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	213297667	213297766	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:208530106;1allele=G/A;version=Hapmap2;RS=rs276438455;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	213371927	213372026	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:208587041;1allele=A/T;version=Hapmap2;RS=rs1064053800;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	213434275	213434374	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:208655221;1allele=C/T;version=Hapmap2;RS=rs836062169;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	213434618	213434717	.	+	.	Name=Ear_row_number;B73v2_pos=1:208655564;1allele=G/T;version=Hapmap2;RS=rs812948989;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	213491897	213491996	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:208713294;1allele=G/A;version=Hapmap2;RS=rs819887471;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	213492863	213492962	.	+	.	Name=Ear_row_number;B73v2_pos=1:208714260;1allele=A/G;version=Hapmap2;RS=rs845842110;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	213495443	213495542	.	+	.	Name=Height_above_ear;B73v2_pos=1:208716840;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	213568962	213569061	.	+	.	Name=Plant_height;B73v2_pos=1:208790789;1allele=T/C;version=Hapmap2;RS=rs276439822;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	213583402	213583501	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:208805229;1allele=C/T;version=Hapmap2;RS=rs807653404;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	213599305	213599404	.	+	.	Name=Fumarate;B73v2_pos=1:208821130;1allele=A/G;version=Hapmap2;RS=rs276440162;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	213740657	213740756	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:208971437;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	213740657	213740756	.	+	.	Name=Cob_diameter;B73v2_pos=1:208971437;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	213893671	213893770	.	+	.	Name=Plant_height;B73v2_pos=1:209070753;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	213910249	213910348	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:209123109;1allele=C/G;version=Hapmap2;RS=rs804416544;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	214007453	214007552	.	+	.	Name=Fumarate;B73v2_pos=1:209183093;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	214011238	214011337	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209179308;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	214012393	214012492	.	+	.	Name=Leaf_width;B73v2_pos=1:209178153;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	214015556	214015645	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209199610;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	214032372	214032471	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209216437;1allele=C/T;version=Hapmap2;RS=rs841539366;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	214032438	214032537	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209216503;1allele=G/T;version=Hapmap2;RS=rs832057326;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	214032680	214032779	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209216745;1allele=T/C;version=Hapmap2;RS=rs815988019;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	214032764	214032863	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209216829;1allele=G/C;version=Hapmap2;RS=rs824229700;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	214039560	214039659	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209223625;1allele=A/G;version=Hapmap2;RS=rs128856293;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	214048305	214048404	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209231302;1allele=A/G;version=Hapmap2;RS=rs276440637;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	214050185	214050284	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:209233179;1allele=C/T;version=Hapmap2;RS=rs276440670;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	214082898	214082997	.	+	.	Name=Ear_row_number;B73v2_pos=1:209265891;1allele=G/A;version=Hapmap2;RS=rs823957815;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	214149562	214149661	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:209329312;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	214301776	214301875	.	+	.	Name=Tassel_length;B73v2_pos=1:209478254;1allele=G/A;version=Hapmap2;RS=rs814642177;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	214327258	214327357	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:209503031;1allele=A/G;version=Hapmap2;RS=rs1063432720;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	214809131	214809230	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:209991102;1allele=T/G;version=Hapmap2;RS=rs824188160;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	214809152	214809251	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:209991123;1allele=C/A;version=Hapmap2;RS=rs818367341;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	214952406	214952505	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:210132721;1allele=T/C;version=Hapmap2;RS=rs821259905;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	215083847	215083946	.	+	.	Name=Plant_height;B73v2_pos=1:210341497;1allele=G/T;version=Hapmap2;RS=rs814682353;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	215089479	215089578	.	+	.	Name=Leaf_width;B73v2_pos=1:210347129;1allele=A/G;version=Hapmap2;RS=rs815495873;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	215247053	215247152	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:210431783;1allele=G/C;version=Hapmap2;RS=rs842378710;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	215270109	215270208	.	+	.	Name=Days_to_silk;B73v2_pos=1:210454843;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	215279794	215279893	.	+	.	Name=Leaf_width;B73v2_pos=1:210464528;1allele=C/G;version=Hapmap2;RS=rs725613374;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	215386297	215386396	.	+	.	Name=Ear_row_number;B73v2_pos=1:210570463;1allele=T/C;version=Hapmap2;RS=rs128858768;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	215386429	215386528	.	+	.	Name=Ear_row_number;B73v2_pos=1:210570595;1allele=G/A;version=Hapmap2;RS=rs128858770;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	215404609	215404708	.	+	.	Name=Cob_diameter;B73v2_pos=1:210589834;1allele=C/T;version=Hapmap2;RS=rs831337218;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	215410181	215410280	.	+	.	Name=Ear_row_number;B73v2_pos=1:210595407;1allele=A/T;version=Hapmap2;RS=rs128858863;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	215412887	215412986	.	+	.	Name=Ear_row_number;B73v2_pos=1:210598113;1allele=G/A;version=Hapmap2;RS=rs128858888;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	215807055	215807154	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:210992389;1allele=C/T;version=Hapmap2;RS=rs128859664;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	215809391	215809490	.	+	.	Name=Ear_row_number;B73v2_pos=1:210994725;1allele=G/T;version=Hapmap2;RS=rs805022920;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	215884105	215884204	.	+	.	Name=Ear_row_number;B73v2_pos=1:211062759;1allele=G/C;version=Hapmap2;RS=rs834355870;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	215931957	215932056	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:211110619;1allele=C/A;version=Hapmap2;RS=rs276444587;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	215950203	215950302	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:211135541;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	216028765	216028864	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:211204863;1allele=G/A;version=Hapmap2;RS=rs814495917;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	216084721	216084820	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:211259493;1allele=C/T;version=Hapmap2;RS=rs276444773;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	216279560	216279659	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:211456495;1allele=G/C;version=Hapmap2;RS=rs843047548;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	216281119	216281218	.	+	.	Name=Total_amino_acids;B73v2_pos=1:211458054;1allele=A/G;version=Hapmap2;RS=rs841297586;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	216303197	216303296	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:211480020;1allele=G/A;version=Hapmap2;RS=rs276445568;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	216303694	216303793	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:211480517;1allele=/ACTTTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	216304660	216304759	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:211481483;1allele=C/T;version=Hapmap2;RS=rs836198801;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	217005797	217005896	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:212182208;1allele=A/G;version=Hapmap2;RS=rs831066018;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	217238374	217238473	.	+	.	Name=Stalk_strength;B73v2_pos=1:212401254;1allele=A/G;version=Hapmap2;RS=rs276446887;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	217241010	217241109	.	+	.	Name=Total_amino_acids;B73v2_pos=1:212403890;1allele=A/C;version=Hapmap2;RS=rs128862269;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	217241771	217241870	.	+	.	Name=Stalk_strength;B73v2_pos=1:212404651;1allele=A/G;version=Hapmap2;RS=rs128862275;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	217321818	217321917	.	+	.	Name=Cob_diameter;B73v2_pos=1:212484906;1allele=G/C;version=Hapmap2;RS=rs131847159;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	217331838	217331937	.	+	.	Name=Total_amino_acids;B73v2_pos=1:212494924;1allele=C/T;version=Hapmap2;RS=rs807458654;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	217336660	217336759	.	+	.	Name=Stalk_strength;B73v2_pos=1:212499746;1allele=G/A;version=Hapmap2;RS=rs128862631;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	217336853	217336952	.	+	.	Name=Total_amino_acids;B73v2_pos=1:212499939;1allele=G/T;version=Hapmap2;RS=rs724317522;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	217338233	217338332	.	+	.	Name=Total_amino_acids;B73v2_pos=1:212501319;1allele=G/A;version=Hapmap2;RS=rs128862657;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	217403314	217403413	.	+	.	Name=Total_amino_acids;B73v2_pos=1:212563494;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	217464894	217464993	.	+	.	Name=Plant_height;B73v2_pos=1:212630201;1allele=C/T;version=Hapmap2;RS=rs276447515;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	217729148	217729247	.	+	.	Name=Cob_diameter;B73v2_pos=1:212903055;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	218121693	218121792	.	+	.	Name=Leaf_length;B73v2_pos=1:213270803;1allele=C/G;version=Hapmap2;RS=rs276448843;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	218122437	218122536	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:213271547;1allele=C/T;version=Hapmap2;RS=rs128864153;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	218122537	218122636	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:213271647;1allele=C/T;version=Hapmap2;RS=rs817641471;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	218130478	218130577	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:213279588;1allele=T/G;version=Hapmap2;RS=rs128864185;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	218146530	218146629	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:213295467;1allele=T/C;version=Hapmap2;RS=rs837294869;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	218199043	218199142	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:213349164;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	218213057	218213156	.	+	.	Name=Total_amino_acids;B73v2_pos=1:213340128;1allele=+/-;version=Hapmap2;RS=rs844702604;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	218237291	218237390	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:213373483;1allele=A/G;version=Hapmap2;RS=rs812565093;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	218262414	218262513	.	+	.	Name=Malate;B73v2_pos=1:213396677;1allele=C/A;version=Hapmap2;RS=rs276449205;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	218417034	218417133	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:213539531;1allele=A/G;version=Hapmap2;RS=rs838153747;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	218607713	218607812	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:213719468;1allele=C/T;version=Hapmap2;RS=rs849094709;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	218674114	218674213	.	+	.	Name=Total_amino_acids;B73v2_pos=1:213812949;1allele=A/C;version=Hapmap2;RS=rs812302392;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	218850465	218850564	.	+	.	Name=Malate;B73v2_pos=1:213983063;1allele=C/T;version=Hapmap2;RS=rs726142541;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	219119283	219119382	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:214237152;1allele=T/A;version=Hapmap2;RS=rs847819073;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	219141368	219141467	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:214258019;1allele=A/C;version=Hapmap2;RS=rs809770958;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	219196973	219197072	.	+	.	Name=Leaf_width;B73v2_pos=1:214309796;1allele=T/G;version=Hapmap2;RS=rs276450816;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	219197625	219197724	.	+	.	Name=Total_amino_acids;B73v2_pos=1:214310448;1allele=G/T;version=Hapmap2;RS=rs824096998;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	219198910	219199009	.	+	.	Name=Cob_diameter;B73v2_pos=1:214311733;1allele=T/A;version=Hapmap2;RS=rs128866968;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	219215303	219215402	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:214327613;1allele=T/C;version=Hapmap2;RS=rs817376702;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	219561775	219561874	.	+	.	Name=Malate;B73v2_pos=1:214636043;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	219612465	219612564	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:214727127;1allele=C/T;version=Hapmap2;RS=rs1062403144;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	219675861	219675960	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:214790535;1allele=A/G;version=Hapmap2;RS=rs1063429151;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	219714938	219715037	.	+	.	Name=Cob_diameter;B73v2_pos=1:214829524;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	219728961	219729060	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:214843547;1allele=G/A;version=Hapmap2;RS=rs276452056;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	219731137	219731236	.	+	.	Name=Leaf_width;B73v2_pos=1:214845722;1allele=C/T;version=Hapmap2;RS=rs131849004;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	219731319	219731418	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:214845904;1allele=A/T;version=Hapmap2;RS=rs276452081;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	219734894	219734993	.	+	.	Name=Leaf_width;B73v2_pos=1:214849479;1allele=T/G;version=Hapmap2;RS=rs839474844;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	219886028	219886127	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:214991665;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	219984739	219984838	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:215091852;1allele=T/C;version=Hapmap1;RS=rs131849319;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	220081887	220081986	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:215197776;1allele=C/T;version=Hapmap2;RS=rs843321734;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220204681	220204780	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215328628;1allele=C/A;version=Hapmap2;RS=rs813282747;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	220217439	220217538	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215341386;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220224717	220224816	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:215348664;1allele=C/T;version=Hapmap2;RS=rs819117224;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220287113	220287212	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215399377;1allele=G/T;version=Hapmap2;RS=rs833999729;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	220402012	220402111	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215530153;1allele=T/C;version=Hapmap2;RS=rs834808102;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220403831	220403930	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215528334;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220451050	220451149	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215561178;1allele=G/A;version=Hapmap2;RS=rs1063307767;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	220456418	220456517	.	+	.	Name=Total_amino_acids;B73v2_pos=1:215566642;1allele=C/T;version=Hapmap2;RS=rs276453235;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220482577	220482676	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215593605;1allele=T/C;version=Hapmap2;RS=rs834874511;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220495407	220495506	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215606435;1allele=/GTCATG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220495871	220495970	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215606899;1allele=A/G;version=Hapmap2;RS=rs128869858;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	220499919	220500018	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215610945;1allele=C/T;version=Hapmap1;RS=rs131849727;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220531900	220531999	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215643069;1allele=T/C;version=Hapmap2;RS=rs1060857609;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220657564	220657663	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215769040;1allele=G/A;version=Hapmap2;RS=rs276453874;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	220661515	220661614	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215772996;1allele=T/C;version=Hapmap2;RS=rs811189593;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	220662098	220662197	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215773579;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220662913	220663012	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215774394;1allele=G/A;version=Hapmap2;RS=rs1064223045;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	220664288	220664387	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215775769;1allele=C/G;version=Hapmap2;RS=rs276453906;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	220666205	220666304	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215777687;1allele=C/T;version=Hapmap2;RS=rs1061887198;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	220695658	220695757	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215808257;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220696015	220696114	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215808614;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220697582	220697681	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215810181;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220709409	220709508	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215822010;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220710275	220710374	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215822876;1allele=C/T;version=Hapmap2;RS=rs844490557;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	220711201	220711300	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215823802;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	220714182	220714281	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:215826782;1allele=G/A;version=Hapmap2;RS=rs815592074;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	221097592	221097691	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:216212036;1allele=C/T;version=Hapmap2;RS=rs131850096;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	221185793	221185892	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:216298608;1allele=G/A;version=Hapmap2;RS=rs1063860805;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	221200071	221200170	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:216311989;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	221272416	221272515	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:216347843;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	221363898	221363997	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:216442931;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	221389718	221389817	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:216417111;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	221461372	221461471	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:216574368;1allele=G/C;version=Hapmap2;RS=rs128870957;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	221767109	221767208	.	+	.	Name=Leaf_width;B73v2_pos=1:216853039;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	221874075	221874174	.	+	.	Name=Days_to_silk;B73v2_pos=1:216977442;1allele=C/T;version=Hapmap2;RS=rs824074567;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	221875034	221875133	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:216978401;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	222028504	222028603	.	+	.	Name=Leaf_length;B73v2_pos=1:217136282;1allele=T/C;version=Hapmap2;RS=rs815831770;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	222054265	222054364	.	+	.	Name=Leaf_width;B73v2_pos=1:217159067;1allele=G/A;version=Hapmap2;RS=rs823893816;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	222073594	222073693	.	+	.	Name=Cob_diameter;B73v2_pos=1:217178417;1allele=A/C;version=Hapmap2;RS=rs128872621;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	222111436	222111535	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:217216218;1allele=G/A;version=Hapmap2;RS=rs833758969;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	222172967	222173066	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:217279035;1allele=A/T;version=Hapmap2;RS=rs825440907;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	222173542	222173641	.	+	.	Name=Leaf_width;B73v2_pos=1:217279610;1allele=C/T;version=Hapmap1;RS=rs128873025;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	222207563	222207662	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:217321727;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	222364131	222364229	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:217469336;1allele=A/G;version=Hapmap2;RS=rs817733296;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	222650745	222650844	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:217756435;1allele=T/C;version=Hapmap2;RS=rs276460837;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	222715844	222715943	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:217820322;1allele=G/A;version=Hapmap2;RS=rs128874397;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	222729533	222729632	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:217848807;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	223628134	223628233	.	+	.	Name=Leaf_width;B73v2_pos=1:218713480;1allele=C/T;version=Hapmap2;RS=rs276462360;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	223684733	223684832	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:218770081;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	223684742	223684841	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:218770090;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	224121330	224121429	.	+	.	Name=Leaf_width;B73v2_pos=1:219230587;1allele=A/G;version=Hapmap2;RS=rs832928614;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	224223980	224224079	.	+	.	Name=Leaf_width;B73v2_pos=1:219333130;1allele=T/C;version=Hapmap2;RS=rs816798446;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	224368518	224368617	.	+	.	Name=Leaf_width;B73v2_pos=1:219471498;1allele=T/G;version=Hapmap2;RS=rs804975505;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	224449638	224449737	.	+	.	Name=Cob_diameter;B73v2_pos=1:219552758;1allele=G/A;version=Hapmap2;RS=rs276463665;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	224738380	224738479	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:219848333;1allele=C/A;version=Hapmap1;RS=rs131852680;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	225017313	225017412	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:220115643;1allele=A/G;version=Hapmap2;RS=rs849815031;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	225019067	225019166	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:220117397;1allele=A/G;version=Hapmap2;RS=rs131853045;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	225046975	225047074	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:220146578;1allele=T/C;version=Hapmap2;RS=rs826760754;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	225245215	225245314	.	+	.	Name=Tassel_length;B73v2_pos=1:220339772;1allele=G/A;version=Hapmap2;RS=rs128877600;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	225301410	225301509	.	+	.	Name=Cob_diameter;B73v2_pos=1:220404544;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	225368678	225368777	.	+	.	Name=Cob_diameter;B73v2_pos=1:220471444;1allele=T/C;version=Hapmap2;RS=rs815916879;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	225637627	225637726	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:220708980;1allele=A/C;version=Hapmap2;RS=rs276464820;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	225637982	225638081	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:220709335;1allele=C/T;version=Hapmap2;RS=rs128877788;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	225643679	225643778	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:220715032;1allele=T/C;version=Hapmap2;RS=rs827919489;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	225647227	225647326	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:220718580;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	225647589	225647688	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:220718942;1allele=A/G;version=Hapmap2;RS=rs813387044;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	225654984	225655083	.	+	.	Name=Malate;B73v2_pos=1:220726336;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	225656446	225656545	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:220727798;1allele=C/T;version=Hapmap2;RS=rs803914189;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	225861555	225861654	.	+	.	Name=Leaf_width;B73v2_pos=1:220928364;1allele=C/T;version=Hapmap2;RS=rs823543455;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	225877892	225877991	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:220944702;1allele=G/A;version=Hapmap2;RS=rs1062751710;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	226033091	226033190	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:221094935;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	226224738	226224837	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:221287698;1allele=G/A;version=Hapmap2;RS=rs803349340;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	227275688	227275787	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:222006538;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	227450327	227450426	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:222169018;1allele=T/C;version=Hapmap2;RS=rs844585939;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	227608385	227608484	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:222325568;1allele=C/G;version=Hapmap2;RS=rs276466313;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	227686162	227686261	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:222400396;1allele=A/G;version=Hapmap2;RS=rs838449499;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	227822925	227823024	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:222537389;1allele=C/T;version=Hapmap2;RS=rs823299355;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	228023245	228023344	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:222786703;1allele=G/A;version=Hapmap2;RS=rs821408610;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	228228181	228228280	.	+	.	Name=Leaf_width;B73v2_pos=1:222952213;1allele=A/G;version=Hapmap2;RS=rs848866515;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	228614730	228614829	.	+	.	Name=Leaf_width;B73v2_pos=1:223161367;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	228695960	228696059	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:223242601;1allele=T/C;version=Hapmap2;RS=rs276468112;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	228719825	228719924	.	+	.	Name=Stalk_strength;B73v2_pos=1:223266466;1allele=G/A;version=Hapmap2;RS=rs817515508;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	228722932	228723031	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:223269573;1allele=G/A;version=Hapmap2;RS=rs276468194;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	228876396	228876495	.	+	.	Name=Malate;B73v2_pos=1:223414418;1allele=C/T;version=Hapmap2;RS=rs827292348;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	228965777	228965876	.	+	.	Name=Malate;B73v2_pos=1:223499312;1allele=A/T;version=Hapmap2;RS=rs128881131;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	229001366	229001465	.	+	.	Name=Malate;B73v2_pos=1:223534406;1allele=G/A;version=Hapmap2;RS=rs128881106;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	229013719	229013818	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:223546758;1allele=C/T;version=Hapmap2;RS=rs276468650;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	229076110	229076209	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:223569163;1allele=C/T;version=Hapmap2;RS=rs834210174;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	229122058	229122157	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:223614687;1allele=G/A;version=Hapmap2;RS=rs841468375;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	229277769	229277868	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:223765669;1allele=A/C;version=Hapmap2;RS=rs128881989;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	229342226	229342325	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:223825742;1allele=A/C;version=Hapmap2;RS=rs128882173;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	229345003	229345102	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:223828519;1allele=G/C;version=Hapmap2;RS=rs128882204;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	229348360	229348459	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:223831877;1allele=C/T;version=Hapmap2;RS=rs276469514;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	229521346	229521445	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:224000949;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	229566366	229566465	.	+	.	Name=Cob_diameter;B73v2_pos=1:224046000;1allele=C/T;version=Hapmap1;RS=rs724649578;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	229588327	229588426	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:224065432;1allele=A/G;version=Hapmap2;RS=rs833370917;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	229591002	229591101	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:224068107;1allele=T/C;version=Hapmap1;RS=rs128882562;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	229904253	229904352	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:224377446;1allele=A/T;version=Hapmap2;RS=rs128883109;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	229907804	229907903	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:224380997;1allele=G/A;version=Hapmap2;RS=rs276470826;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	230109138	230109237	.	+	.	Name=Leaf_width;B73v2_pos=1:224564721;1allele=G/A;version=Hapmap2;RS=rs846096842;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	230109143	230109242	.	+	.	Name=Leaf_width;B73v2_pos=1:224564726;1allele=C/T;version=Hapmap2;RS=rs809516716;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	230282518	230282617	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:224738741;1allele=T/C;version=Hapmap2;RS=rs820175463;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	230286073	230286172	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:224742296;1allele=C/T;version=Hapmap1;RS=rs131857014;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	230312849	230312948	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:224769072;1allele=G/A;version=Hapmap2;RS=rs128883498;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	230588145	230588244	.	+	.	Name=Nitrate;B73v2_pos=1:225031411;1allele=G/A;version=Hapmap2;RS=rs822993849;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	230597244	230597343	.	+	.	Name=Stalk_strength;B73v2_pos=1:225040506;1allele=C/A;version=Hapmap1;RS=rs128883781;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	230600576	230600675	.	+	.	Name=Height_above_ear;B73v2_pos=1:225043838;1allele=C/A;version=Hapmap2;RS=rs724804017;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	230601715	230601814	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:225044977;1allele=T/A;version=Hapmap2;RS=rs1062445726;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	230612086	230612185	.	+	.	Name=Tassel_length;B73v2_pos=1:225051178;1allele=T/A;version=Hapmap2;RS=rs840795735;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	230628672	230628771	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:224993135;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	230866537	230866636	.	+	.	Name=Stalk_strength;B73v2_pos=1:225296288;1allele=C/T;version=Hapmap2;RS=rs842107638;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	230973129	230973228	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:225411168;1allele=A/G;version=Hapmap2;RS=rs844420151;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	230997489	230997588	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:225435529;1allele=C/A;version=Hapmap2;RS=rs814657968;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	231013481	231013580	.	+	.	Name=Stalk_strength;B73v2_pos=1:225468393;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	231192260	231192359	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:225625194;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	231194231	231194330	.	+	.	Name=Ear_row_number;B73v2_pos=1:225627165;1allele=G/A;version=Hapmap2;RS=rs128884319;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	231327409	231327508	.	+	.	Name=Leaf_length;B73v2_pos=1:225758282;1allele=C/T;version=Hapmap2;RS=rs835147835;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	231377312	231377411	.	+	.	Name=Leaf_width;B73v2_pos=1:225802025;1allele=G/A;version=Hapmap2;RS=rs811937249;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	231383183	231383282	.	+	.	Name=Nitrate;B73v2_pos=1:225807896;1allele=G/T;version=Hapmap2;RS=rs808140414;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	231410313	231410412	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:225861699;1allele=A/C;version=Hapmap2;RS=rs838754564;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	231415195	231415294	.	+	.	Name=Leaf_width;B73v2_pos=1:225866581;1allele=G/A;version=Hapmap2;RS=rs822138143;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	231416384	231416483	.	+	.	Name=Leaf_width;B73v2_pos=1:225867770;1allele=G/A;version=Hapmap2;RS=rs805098319;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	231498614	231498713	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:225952859;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	231499908	231500007	.	+	.	Name=Nitrate;B73v2_pos=1:225951565;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	231539326	231539425	.	+	.	Name=Nitrate;B73v2_pos=1:225974073;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	231562252	231562351	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:226024506;1allele=T/A;version=Hapmap2;RS=rs276472873;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	231562837	231562936	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:226025091;1allele=G/A;version=Hapmap2;RS=rs821004252;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	231574622	231574721	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:226036970;1allele=A/G;version=Hapmap2;RS=rs276472899;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	231580330	231580429	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:226042678;1allele=C/T;version=Hapmap2;RS=rs1062511006;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	231646686	231646785	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:226149614;1allele=G/A;version=Hapmap2;RS=rs128885062;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	231722588	231722687	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:226221189;1allele=G/A;version=Hapmap1;RS=rs128885236;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	231739382	231739481	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:226237992;1allele=C/G;version=Hapmap2;RS=rs834235398;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	231811384	231811483	.	+	.	Name=Leaf_width;B73v2_pos=1:226312188;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	231814028	231814127	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:226314832;1allele=G/T;version=Hapmap2;RS=rs811395641;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	232112562	232112661	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:226620867;1allele=C/T;version=Hapmap2;RS=rs813632235;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	232271303	232271401	.	+	.	Name=Days_to_silk;B73v2_pos=1:226757457;1allele=G/A;version=Hapmap2;RS=rs811279852;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	232339772	232339871	.	+	.	Name=Starch;B73v2_pos=1:226825933;1allele=G/A;version=Hapmap2;RS=rs808555581;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	232427337	232427436	.	+	.	Name=Tassel_length;B73v2_pos=1:226912916;1allele=C/T;version=Hapmap1;RS=rs131858918;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	232439333	232439428	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:226924933;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	232940108	232940207	.	+	.	Name=Height_above_ear;B73v2_pos=1:227434759;1allele=C/T;version=Hapmap2;RS=rs128887180;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	233202109	233202208	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:227694590;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233289170	233289269	.	+	.	Name=Height_above_ear;B73v2_pos=1:227782914;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233349177	233349276	.	+	.	Name=Days_to_silk;B73v2_pos=1:227840123;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233349182	233349281	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:227840128;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233499880	233499979	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:227983394;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233529869	233529968	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:228013383;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233633177	233633276	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:228118713;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233757746	233757845	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:228254030;1allele=G/C;version=Hapmap2;RS=rs128888550;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	233758898	233758997	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:228255180;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233825548	233825647	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:228319115;1allele=C/G;version=Hapmap1;RS=rs131860060;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	233905001	233905100	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:228399532;1allele=T/G;version=Hapmap2;RS=rs820562259;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	233953009	233953108	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:228486122;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	233970337	233970436	.	+	.	Name=Nitrate;B73v2_pos=1:228435999;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234073411	234073510	.	+	.	Name=Height_above_ear;B73v2_pos=1:228567652;1allele=A/C;version=Hapmap2;RS=rs1063781955;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	234076341	234076440	.	+	.	Name=Height_above_ear;B73v2_pos=1:228570581;1allele=G/T;version=Hapmap2;RS=rs805973878;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	234078616	234078715	.	+	.	Name=Height_above_ear;B73v2_pos=1:228572859;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234087881	234087980	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:228583759;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234113291	234113390	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:228608340;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234140345	234140444	.	+	.	Name=Height_above_ear;B73v2_pos=1:228634131;1allele=C/T;version=Hapmap2;RS=rs276477107;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234151057	234151156	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:228644844;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234153003	234153102	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:228646790;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234229081	234229180	.	+	.	Name=Height_above_ear;B73v2_pos=1:228703966;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234230009	234230108	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:228704894;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234239493	234239592	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:228714380;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234248275	234248374	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:228723166;1allele=G/T;version=Hapmap2;RS=rs128889337;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	234250940	234251039	.	+	.	Name=Plant_height;B73v2_pos=1:228725829;1allele=G/C;version=Hapmap2;RS=rs276477289;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	234251034	234251133	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:228725923;1allele=T/C;version=Hapmap2;RS=rs1060580292;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234252505	234252604	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:228727394;1allele=A/T;version=Hapmap2;RS=rs128889362;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	234252780	234252879	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:228727669;1allele=T/C;version=Hapmap2;RS=rs276477324;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234253250	234253349	.	+	.	Name=Height_above_ear;B73v2_pos=1:228728139;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234253303	234253402	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:228728192;1allele=T/G;version=Hapmap2;RS=rs276477333;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	234253433	234253532	.	+	.	Name=Height_above_ear;B73v2_pos=1:228728322;1allele=G/A;version=Hapmap2;RS=rs1061366580;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	234253524	234253623	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:228728413;1allele=C/T;version=Hapmap2;RS=rs276477335;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234254476	234254575	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:228729365;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234254476	234254575	.	+	.	Name=Height_above_ear;B73v2_pos=1:228729365;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234254749	234254848	.	+	.	Name=Plant_height;B73v2_pos=1:228729638;1allele=T/A;version=Hapmap2;RS=rs1062221910;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	234254749	234254848	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:228729638;1allele=T/A;version=Hapmap2;RS=rs1062221910;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	234254931	234255030	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:228729820;1allele=A/G;version=Hapmap2;RS=rs276477352;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	234266366	234266465	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:228741258;1allele=T/A;version=Hapmap2;RS=rs276477363;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	234266647	234266746	.	+	.	Name=Height_above_ear;B73v2_pos=1:228741539;1allele=C/T;version=Hapmap2;RS=rs276477371;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	234266694	234266793	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:228741586;1allele=C/T;version=Hapmap2;RS=rs128889373;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234266725	234266824	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:228741617;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234270364	234270463	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:228745256;1allele=C/T;version=Hapmap2;RS=rs128889385;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	234270740	234270839	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:228745632;1allele=C/T;version=Hapmap2;RS=rs276477435;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234270989	234271088	.	+	.	Name=Height_above_ear;B73v2_pos=1:228745881;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234272107	234272206	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:228746999;1allele=G/T;version=Hapmap2;RS=rs276477465;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	234272445	234272544	.	+	.	Name=Height_above_ear;B73v2_pos=1:228747337;1allele=G/T;version=Hapmap2;RS=rs1061974674;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	234272717	234272816	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:228747609;1allele=C/T;version=Hapmap2;RS=rs128889407;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234285180	234285279	.	+	.	Name=Height_above_ear;B73v2_pos=1:228760072;1allele=A/G;version=Hapmap2;RS=rs131860449;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	234287301	234287400	.	+	.	Name=Height_above_ear;B73v2_pos=1:228762193;1allele=C/A;version=Hapmap2;RS=rs1060516724;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	234287795	234287894	.	+	.	Name=Leaf_width;B73v2_pos=1:228762687;1allele=G/A;version=Hapmap2;RS=rs1062923988;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	234289484	234289583	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:228764376;1allele=T/C;version=Hapmap2;RS=rs276477580;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	234365465	234365564	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:228841301;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234417183	234417282	.	+	.	Name=Days_to_silk;B73v2_pos=1:228921384;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234625949	234626048	.	+	.	Name=Ear_row_number;B73v2_pos=1:228998729;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234630576	234630675	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:229003356;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234630683	234630782	.	+	.	Name=Days_to_silk;B73v2_pos=1:229003463;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234632527	234632626	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:229005307;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234633739	234633838	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:229006519;1allele=T/C;version=Hapmap2;RS=rs128889743;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	234634588	234634687	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:229007368;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234645459	234645558	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:229017842;1allele=G/A;version=Hapmap2;RS=rs1060798115;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	234714024	234714123	.	+	.	Name=Days_to_silk;B73v2_pos=1:229086532;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234714589	234714688	.	+	.	Name=Nitrate;B73v2_pos=1:229087097;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234738640	234738739	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:229111145;1allele=A/G;version=Hapmap2;RS=rs841442963;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	234811319	234811418	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:229184119;1allele=T/C;version=Hapmap2;RS=rs727254159;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	234815680	234815779	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:229188480;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234830950	234831049	.	+	.	Name=Nitrate;B73v2_pos=1:229203751;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234853524	234853623	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:229225523;1allele=A/G;version=Hapmap2;RS=rs1063296347;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	234853975	234854074	.	+	.	Name=Nitrate;B73v2_pos=1:229225974;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	234919300	234919399	.	+	.	Name=Ear_row_number;B73v2_pos=1:229287511;1allele=C/T;version=Hapmap2;RS=rs1060649924;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	235004762	235004861	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:229351173;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235233411	235233510	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:229571752;1allele=A/C;version=Hapmap2;RS=rs727226193;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	235234749	235234848	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:229573090;1allele=G/A;version=Hapmap2;RS=rs131860970;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	235235717	235235816	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:229574058;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235274007	235274106	.	+	.	Name=Nitrate;B73v2_pos=1:229610507;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235319200	235319299	.	+	.	Name=Nitrate;B73v2_pos=1:229660825;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235320013	235320112	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:229661638;1allele=T/C;version=Hapmap2;RS=rs1061084812;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	235348373	235348472	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:229689948;1allele=C/T;version=Hapmap2;RS=rs1061878175;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	235391710	235391809	.	+	.	Name=Nitrate;B73v2_pos=1:229733371;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235531627	235531726	.	+	.	Name=Nitrate;B73v2_pos=1:229869760;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235533842	235533941	.	+	.	Name=Nitrate;B73v2_pos=1:229871975;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235576867	235576966	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:229915002;1allele=A/G;version=Hapmap2;RS=rs128891507;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	235679156	235679255	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:230023077;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235679164	235679263	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:230023085;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235778586	235778685	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:230122926;1allele=G/A;version=Hapmap2;RS=rs128891793;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	235778757	235778856	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:230123097;1allele=G/A;version=Hapmap2;RS=rs128891795;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	235836257	235836356	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:230178514;1allele=G/A;version=Hapmap2;RS=rs276480740;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	235943173	235943272	.	+	.	Name=Nitrate;B73v2_pos=1:230284727;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	235991779	235991878	.	+	.	Name=Cob_diameter;B73v2_pos=1:230339352;1allele=G/T;version=Hapmap2;RS=rs276481083;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	236187986	236188085	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:230536683;1allele=A/G;version=Hapmap2;RS=rs128892914;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	236248293	236248392	.	+	.	Name=Leaf_width;B73v2_pos=1:230597933;1allele=C/T;version=Hapmap2;RS=rs128893040;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	236331022	236331121	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:230674174;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236510022	236510121	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:230835105;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236557408	236557507	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:230883012;1allele=A/T;version=Hapmap2;RS=rs823629741;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	236558003	236558102	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:230883607;1allele=G/A;version=Hapmap2;RS=rs276481882;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	236558003	236558102	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:230883607;1allele=G/A;version=Hapmap2;RS=rs276481882;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	236559243	236559342	.	+	.	Name=Leaf_width;B73v2_pos=1:230884847;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236592149	236592248	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:230918575;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236593113	236593212	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:230919539;1allele=A/G;version=Hapmap2;RS=rs832020162;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	236601259	236601358	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:230927679;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236610277	236610376	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:230936697;1allele=G/A;version=Hapmap2;RS=rs128893762;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	236629619	236629718	.	+	.	Name=Tassel_length;B73v2_pos=1:230956048;1allele=A/T;version=Hapmap2;RS=rs827761962;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	236634445	236634544	.	+	.	Name=Tassel_length;B73v2_pos=1:230960874;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236636229	236636328	.	+	.	Name=Tassel_length;B73v2_pos=1:230962658;1allele=T/C;version=Hapmap2;RS=rs727027922;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236637273	236637372	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:230963702;1allele=A/G;version=Hapmap2;RS=rs1063828986;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	236637273	236637372	.	+	.	Name=Days_to_silk;B73v2_pos=1:230963702;1allele=A/G;version=Hapmap2;RS=rs1063828986;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	236638146	236638245	.	+	.	Name=Tassel_length;B73v2_pos=1:230964575;1allele=C/T;version=Hapmap2;RS=rs1063461787;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	236638152	236638251	.	+	.	Name=Tassel_length;B73v2_pos=1:230964581;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236639658	236639757	.	+	.	Name=Tassel_length;B73v2_pos=1:230966115;1allele=A/G;version=Hapmap2;RS=rs727078471;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	236711659	236711758	.	+	.	Name=Days_to_silk;B73v2_pos=1:231038121;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236745889	236745988	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:231072733;1allele=G/T;version=Hapmap2;RS=rs128893868;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	236764154	236764253	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:231091002;1allele=T/C;version=Hapmap2;RS=rs131862634;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236764910	236765009	.	+	.	Name=Plant_height;B73v2_pos=1:231091758;1allele=T/C;version=Hapmap1;RS=rs131862666;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	236765157	236765256	.	+	.	Name=Tassel_length;B73v2_pos=1:231092005;1allele=T/G;version=Hapmap2;RS=rs128893898;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	236767780	236767879	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231094628;1allele=T/C;version=Hapmap2;RS=rs128893918;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	236791120	236791219	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231159190;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236926319	236926418	.	+	.	Name=Plant_height;B73v2_pos=1:231241254;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236926341	236926440	.	+	.	Name=Plant_height;B73v2_pos=1:231241276;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236938155	236938254	.	+	.	Name=Plant_height;B73v2_pos=1:231253091;1allele=A/G;version=Hapmap2;RS=rs1063306871;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	236959296	236959395	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231273274;1allele=A/G;version=Hapmap2;RS=rs276482513;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	236964241	236964340	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:231278219;1allele=T/C;version=Hapmap1;RS=rs131862813;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236964778	236964877	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231278756;1allele=C/T;version=Hapmap1;RS=rs131862824;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	236964971	236965070	.	+	.	Name=Plant_height;B73v2_pos=1:231278949;1allele=C/G;version=Hapmap1;RS=rs128894238;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	236965055	236965154	.	+	.	Name=Plant_height;B73v2_pos=1:231279033;1allele=C/A;version=Hapmap1;RS=rs131862829;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	236965940	236966039	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:231279918;1allele=T/C;version=Hapmap2;RS=rs823653733;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236965974	236966073	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:231279952;1allele=T/C;version=Hapmap2;RS=rs1063859269;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236966042	236966141	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:231280020;1allele=C/T;version=Hapmap2;RS=rs1062186965;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	236966531	236966630	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:231280509;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236966649	236966748	.	+	.	Name=Plant_height;B73v2_pos=1:231280627;1allele=T/C;version=Hapmap2;RS=rs1063245509;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236966649	236966748	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231280627;1allele=T/C;version=Hapmap2;RS=rs1063245509;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236966649	236966748	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:231280627;1allele=T/C;version=Hapmap2;RS=rs1063245509;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236966669	236966768	.	+	.	Name=Plant_height;B73v2_pos=1:231280647;1allele=A/G;version=Hapmap2;RS=rs1061106167;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	236966829	236966928	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:231280807;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	236966850	236966949	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231280828;1allele=C/T;version=Hapmap2;RS=rs128894245;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	236966914	236967013	.	+	.	Name=Height_above_ear;B73v2_pos=1:231280892;1allele=A/T;version=Hapmap2;RS=rs128894246;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	236968230	236968329	.	+	.	Name=Plant_height;B73v2_pos=1:231282209;1allele=G/A;version=Hapmap2;RS=rs276482543;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	236968230	236968329	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:231282209;1allele=G/A;version=Hapmap2;RS=rs276482543;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	236968246	236968345	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:231282225;1allele=C/T;version=Hapmap2;RS=rs276482545;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	236969078	236969177	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231283057;1allele=G/C;version=Hapmap2;RS=rs276482554;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	236969078	236969177	.	+	.	Name=Height_above_ear;B73v2_pos=1:231283057;1allele=G/C;version=Hapmap2;RS=rs276482554;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	236969182	236969281	.	+	.	Name=Plant_height;B73v2_pos=1:231283161;1allele=A/T;version=Hapmap1;RS=rs128894271;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	237189063	237189162	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:231474914;1allele=G/A;version=Hapmap1;RS=rs128894517;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	237357829	237357928	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:231637658;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	237359102	237359201	.	+	.	Name=Plant_height;B73v2_pos=1:231638931;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	237359102	237359201	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231638931;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	237390669	237390768	.	+	.	Name=Plant_height;B73v2_pos=1:231670732;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	237416479	237416578	.	+	.	Name=Plant_height;B73v2_pos=1:231696544;1allele=A/G;version=Hapmap2;RS=rs128894709;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	237424950	237425049	.	+	.	Name=Height_above_ear;B73v2_pos=1:231705015;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	237981366	237981465	.	+	.	Name=Height_above_ear;B73v2_pos=1:232285759;1allele=G/A;version=Hapmap1;RS=rs128894978;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	237982662	237982761	.	+	.	Name=Height_above_ear;B73v2_pos=1:232287055;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	237982669	237982768	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:232287062;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	237985204	237985303	.	+	.	Name=Plant_height;B73v2_pos=1:232289597;1allele=A/G;version=Hapmap2;RS=rs128895003;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	237985204	237985303	.	+	.	Name=Height_above_ear;B73v2_pos=1:232289597;1allele=A/G;version=Hapmap2;RS=rs128895003;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	237985474	237985573	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:232289867;1allele=T/G;version=Hapmap2;RS=rs806533435;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	237997499	237997598	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:232301891;1allele=C/A;version=Hapmap2;RS=rs836370291;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	237997499	237997598	.	+	.	Name=Height_above_ear;B73v2_pos=1:232301891;1allele=C/A;version=Hapmap2;RS=rs836370291;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	237997499	237997598	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:232301891;1allele=C/A;version=Hapmap2;RS=rs836370291;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	237997500	237997599	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:232301892;1allele=T/C;version=Hapmap2;RS=rs841808384;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	237997500	237997599	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:232301892;1allele=T/C;version=Hapmap2;RS=rs841808384;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238073120	238073219	.	+	.	Name=Height_above_ear;B73v2_pos=1:232374150;1allele=T/C;version=Hapmap2;RS=rs276485459;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238073292	238073391	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232374322;1allele=C/A;version=Hapmap2;RS=rs1063033366;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	238220323	238220422	.	+	.	Name=Height_above_ear;B73v2_pos=1:232519090;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	238221850	238221949	.	+	.	Name=Height_above_ear;B73v2_pos=1:232520617;1allele=A/T;version=Hapmap2;RS=rs128895240;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	238221914	238222013	.	+	.	Name=Plant_height;B73v2_pos=1:232520681;1allele=A/G;version=Hapmap2;RS=rs131863405;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	238221914	238222013	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:232520681;1allele=A/G;version=Hapmap2;RS=rs131863405;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	238222114	238222213	.	+	.	Name=Plant_height;B73v2_pos=1:232520881;1allele=C/T;version=Hapmap1;RS=rs131863409;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	238222304	238222403	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:232521071;1allele=A/G;version=Hapmap2;RS=rs276485595;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	238228183	238228282	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232526950;1allele=G/T;version=Hapmap2;RS=rs276485598;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	238228309	238228408	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232527076;1allele=C/T;version=Hapmap2;RS=rs128895253;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238228312	238228411	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232527079;1allele=G/T;version=Hapmap1;RS=rs131863423;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	238228378	238228477	.	+	.	Name=Height_above_ear;B73v2_pos=1:232527145;1allele=G/A;version=Hapmap2;RS=rs131863426;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	238228581	238228680	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232527348;1allele=T/C;version=Hapmap1;RS=rs128895256;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238228631	238228730	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:232527398;1allele=G/A;version=Hapmap2;RS=rs131863435;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	238229002	238229101	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232527769;1allele=A/G;version=Hapmap2;RS=rs128895265;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	238229922	238230021	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232528689;1allele=A/G;version=Hapmap2;RS=rs128895275;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	238538259	238538358	.	+	.	Name=Height_above_ear;B73v2_pos=1:232836226;1allele=T/C;version=Hapmap1;RS=rs131863704;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238538259	238538358	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232836226;1allele=T/C;version=Hapmap1;RS=rs131863704;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238538259	238538358	.	+	.	Name=Plant_height;B73v2_pos=1:232836226;1allele=T/C;version=Hapmap1;RS=rs131863704;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238538278	238538377	.	+	.	Name=Plant_height;B73v2_pos=1:232836245;1allele=T/C;version=Hapmap1;RS=rs131863705;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238538278	238538377	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:232836245;1allele=T/C;version=Hapmap1;RS=rs131863705;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	238615274	238615373	.	+	.	Name=Height_above_ear;B73v2_pos=1:232922615;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	238660196	238660295	.	+	.	Name=Height_above_ear;B73v2_pos=1:232968430;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	238674027	238674126	.	+	.	Name=Height_above_ear;B73v2_pos=1:232982265;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239116560	239116659	.	+	.	Name=Plant_height;B73v2_pos=1:233414376;1allele=T/C;version=Hapmap2;RS=rs128896105;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	239116602	239116701	.	+	.	Name=Plant_height;B73v2_pos=1:233414418;1allele=A/C;version=Hapmap2;RS=rs128896107;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	239163567	239163666	.	+	.	Name=Total_amino_acids;B73v2_pos=1:233461382;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239189923	239190022	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:233487743;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239259745	239259844	.	+	.	Name=Height_above_ear;B73v2_pos=1:233557575;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239259794	239259893	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:233557624;1allele=T/C;version=Hapmap2;RS=rs276486600;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	239261470	239261569	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:233559300;1allele=G/A;version=Hapmap2;RS=rs724334479;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	239261611	239261710	.	+	.	Name=Height_above_ear;B73v2_pos=1:233559441;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239263199	239263298	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:233561029;1allele=C/T;version=Hapmap2;RS=rs276486657;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	239330957	239331056	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:233574351;1allele=G/A;version=Hapmap2;RS=rs276486694;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	239332698	239332797	.	+	.	Name=Height_above_ear;B73v2_pos=1:233576092;1allele=C/T;version=Hapmap2;RS=rs276486706;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	239342106	239342205	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:233585501;1allele=G/A;version=Hapmap2;RS=rs1063648281;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	239370876	239370975	.	+	.	Name=Height_above_ear;B73v2_pos=1:233656501;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239490439	239490538	.	+	.	Name=Days_to_silk;B73v2_pos=1:233776417;1allele=G/A;version=Hapmap2;RS=rs824596286;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	239546845	239546944	.	+	.	Name=Height_above_ear;B73v2_pos=1:233832452;1allele=A/G;version=Hapmap2;RS=rs276487207;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	239772516	239772615	.	+	.	Name=Height_above_ear;B73v2_pos=1:234052582;1allele=A/G;version=Hapmap2;RS=rs128896916;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	239773910	239774009	.	+	.	Name=Height_above_ear;B73v2_pos=1:234053976;1allele=A/G;version=Hapmap2;RS=rs276487431;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	239774357	239774456	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:234054423;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239774358	239774457	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:234054424;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239840915	239841014	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:234121966;1allele=C/G;version=Hapmap2;RS=rs128897059;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	239911391	239911490	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:234191706;1allele=A/T;version=Hapmap2;RS=rs276487786;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	239936217	239936316	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:234216532;1allele=T/C;version=Hapmap2;RS=rs276487968;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	239943194	239943293	.	+	.	Name=Tassel_length;B73v2_pos=1:234223509;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	239998735	239998834	.	+	.	Name=Leaf_length;B73v2_pos=1:234278886;1allele=C/T;version=Hapmap2;RS=rs837646599;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	240013998	240014097	.	+	.	Name=Leaf_length;B73v2_pos=1:234294961;1allele=C/T;version=Hapmap2;RS=rs1064444400;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	240016683	240016781	.	+	.	Name=Leaf_length;B73v2_pos=1:234297647;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	240025448	240025547	.	+	.	Name=Leaf_length;B73v2_pos=1:234306413;1allele=C/T;version=Hapmap2;RS=rs128897830;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	240029068	240029167	.	+	.	Name=Leaf_length;B73v2_pos=1:234310033;1allele=T/C;version=Hapmap2;RS=rs276488307;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	240156886	240156985	.	+	.	Name=Height_above_ear;B73v2_pos=1:234417427;1allele=T/C;version=Hapmap2;RS=rs1061315578;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	240464991	240465090	.	+	.	Name=Tassel_length;B73v2_pos=1:234996859;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	240494439	240494538	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:234967401;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	240560528	240560627	.	+	.	Name=Days_to_silk;B73v2_pos=1:235036803;1allele=C/G;version=Hapmap2;RS=rs1064134331;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	240665794	240665893	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:235113047;1allele=G/A;version=Hapmap2;RS=rs1063074177;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	240780891	240780990	.	+	.	Name=Tassel_length;B73v2_pos=1:235247568;1allele=G/T;version=Hapmap2;RS=rs1061835334;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	240851526	240851625	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:235317683;1allele=C/T;version=Hapmap2;RS=rs276490034;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	241032097	241032196	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:235489582;1allele=C/T;version=Hapmap2;RS=rs128899821;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	241110877	241110976	.	+	.	Name=Stalk_strength;B73v2_pos=1:235569279;1allele=A/T;version=Hapmap2;RS=rs131865399;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	241122979	241123078	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:235581400;1allele=T/C;version=Hapmap2;RS=rs276490501;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	241128715	241128814	.	+	.	Name=Tassel_length;B73v2_pos=1:235587138;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241197111	241197210	.	+	.	Name=Height_above_ear;B73v2_pos=1:235643775;1allele=C/T;version=Hapmap2;RS=rs128899979;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	241197544	241197643	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:235644208;1allele=G/A;version=Hapmap1;RS=rs131865444;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	241225471	241225570	.	+	.	Name=Leaf_length;B73v2_pos=1:235672124;1allele=T/C;version=Hapmap2;RS=rs128900116;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	241240812	241240911	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:235687465;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241250764	241250863	.	+	.	Name=Tassel_length;B73v2_pos=1:235705883;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241250770	241250869	.	+	.	Name=Leaf_length;B73v2_pos=1:235705889;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241266625	241266724	.	+	.	Name=Cob_diameter;B73v2_pos=1:235721631;1allele=G/A;version=Hapmap2;RS=rs276490849;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	241311515	241311614	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:235766518;1allele=T/C;version=Hapmap2;RS=rs1062974330;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	241543206	241543305	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:235984936;1allele=A/G;version=Hapmap2;RS=rs128900519;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	241545399	241545498	.	+	.	Name=Stalk_strength;B73v2_pos=1:235987130;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241553254	241553353	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:235994985;1allele=C/A;version=Hapmap2;RS=rs276491798;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	241553898	241553997	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:235995629;1allele=A/G;version=Hapmap2;RS=rs1063823548;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	241573286	241573385	.	+	.	Name=Plant_height;B73v2_pos=1:236014965;1allele=G/T;version=Hapmap1;RS=rs131865839;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	241705842	241705941	.	+	.	Name=Plant_height;B73v2_pos=1:236146495;1allele=G/T;version=Hapmap2;RS=rs1060520357;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	241714702	241714801	.	+	.	Name=Stalk_strength;B73v2_pos=1:236155355;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241716447	241716546	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:236157100;1allele=G/A;version=Hapmap2;RS=rs128900918;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	241728616	241728715	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:236169270;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241730790	241730889	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:236171452;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241731932	241732031	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:236172594;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241731936	241732035	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:236172598;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	241946283	241946382	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:236384092;1allele=A/T;version=Hapmap2;RS=rs128901240;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	241957213	241957312	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:236395023;1allele=A/G;version=Hapmap2;RS=rs128901279;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	242063143	242063242	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:236573042;1allele=A/G;version=Hapmap2;RS=rs131866128;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	242285714	242285813	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:236778029;1allele=G/A;version=Hapmap2;RS=rs131866181;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	242448548	242448647	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:236942530;1allele=T/C;version=Hapmap2;RS=rs1064594727;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	242450273	242450372	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:236944255;1allele=G/A;version=Hapmap2;RS=rs724197289;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	242513649	242513748	.	+	.	Name=Tassel_length;B73v2_pos=1:237046036;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	242518697	242518796	.	+	.	Name=Height_above_ear;B73v2_pos=1:237051084;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	242519168	242519267	.	+	.	Name=Height_above_ear;B73v2_pos=1:237051555;1allele=G/C;version=Hapmap2;RS=rs834253329;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	242560332	242560431	.	+	.	Name=Tassel_length;B73v2_pos=1:237084979;1allele=C/T;version=Hapmap2;RS=rs1064243976;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	242598464	242598563	.	+	.	Name=Tassel_length;B73v2_pos=1:237168022;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	242648366	242648465	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:237177676;1allele=A/C;version=Hapmap2;RS=rs276493799;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	242648550	242648649	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:237177860;1allele=TATCC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	242649747	242649846	.	+	.	Name=Starch;B73v2_pos=1:237179057;1allele=C/T;version=Hapmap2;RS=rs832597572;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	243198947	243199046	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:237738395;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	243224544	243224643	.	+	.	Name=Leaf_width;B73v2_pos=1:237798600;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	243262649	243262748	.	+	.	Name=Nitrate;B73v2_pos=1:237753278;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	243554414	243554513	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:237948041;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	243571709	243571808	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:237965327;1allele=T/G;version=Hapmap1;RS=rs128903477;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	243745803	243745902	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:238139075;1allele=T/C;version=Hapmap2;RS=rs1062547787;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	243878896	243878993	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:238266444;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	243884578	243884677	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:238272412;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	243959839	243959938	.	+	.	Name=Nitrate;B73v2_pos=1:238343850;1allele=A/G;version=Hapmap2;RS=rs726238421;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	244008257	244008356	.	+	.	Name=Stalk_strength;B73v2_pos=1:238392269;1allele=T/A;version=Hapmap2;RS=rs128904019;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	244070442	244070541	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:238449894;1allele=C/A;version=Hapmap2;RS=rs276496936;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	244137348	244137447	.	+	.	Name=Leaf_width;B73v2_pos=1:238514138;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	244243891	244243990	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:238613066;1allele=C/T;version=Hapmap2;RS=rs1063623414;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	244243992	244244091	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:238613167;1allele=G/A;version=Hapmap2;RS=rs1062237229;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	244440629	244440728	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:238807932;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245066910	245067009	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:239432819;1allele=A/G;version=Hapmap1;RS=rs131868029;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	245253811	245253910	.	+	.	Name=Days_to_silk;B73v2_pos=1:239614875;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245383287	245383386	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:239747519;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245449203	245449302	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:239813031;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245466706	245466805	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:239830536;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245503935	245504034	.	+	.	Name=Nitrate;B73v2_pos=1:239867765;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245507693	245507792	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:239871523;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245530358	245530457	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:239894188;1allele=A/C;version=Hapmap2;RS=rs727122160;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	245533150	245533249	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:239896980;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245892448	245892547	.	+	.	Name=Days_to_silk;B73v2_pos=1:240238183;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	245938138	245938237	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240283877;1allele=T/A;version=Hapmap2;RS=rs725242262;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	245989672	245989771	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240338269;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246014348	246014447	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:240354745;1allele=G/T;version=Hapmap2;RS=rs725701549;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	246030210	246030309	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:240377681;1allele=G/A;version=Hapmap2;RS=rs276500344;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	246030594	246030693	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240378065;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246035812	246035911	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:240383283;1allele=G/A;version=Hapmap1;RS=rs128907608;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	246048520	246048619	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240396998;1allele=A/G;version=Hapmap2;RS=rs276500428;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	246049943	246050042	.	+	.	Name=Height_above_ear;B73v2_pos=1:240398421;1allele=A/G;version=Hapmap1;RS=rs131868815;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	246050047	246050146	.	+	.	Name=Height_above_ear;B73v2_pos=1:240398525;1allele=C/T;version=Hapmap2;RS=rs128907703;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	246242475	246242574	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240586338;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246301634	246301733	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240662281;1allele=C/T;version=Hapmap2;RS=rs276501255;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	246302512	246302611	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:240663159;1allele=C/A;version=Hapmap2;RS=rs128908494;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	246409528	246409627	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240747674;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246554543	246554642	.	+	.	Name=Days_to_silk;B73v2_pos=1:240892336;1allele=A/G;version=Hapmap2;RS=rs1063544955;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	246560821	246560920	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:240898614;1allele=T/C;version=Hapmap2;RS=rs128909298;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	246566064	246566163	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240903857;1allele=T/A;version=Hapmap2;RS=rs276501828;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	246567830	246567929	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240905623;1allele=G/A;version=Hapmap2;RS=rs128909336;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	246569377	246569476	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240907170;1allele=C/T;version=Hapmap2;RS=rs128909349;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	246569405	246569504	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240907198;1allele=G/A;version=Hapmap2;RS=rs128909350;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	246570651	246570750	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:240908444;1allele=G/A;version=Hapmap2;RS=rs128909368;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	246585439	246585538	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240991656;1allele=C/T;version=Hapmap2;RS=rs724519016;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	246589732	246589831	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240995949;1allele=G/T;version=Hapmap2;RS=rs725658207;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	246589939	246590038	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240996156;1allele=G/A;version=Hapmap2;RS=rs1064556687;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	246589963	246590062	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240996180;1allele=C/T;version=Hapmap2;RS=rs1063863896;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	246594294	246594393	.	+	.	Name=Days_to_silk;B73v2_pos=1:240916325;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246604691	246604790	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:240926722;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246869699	246869798	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:241192593;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246870834	246870933	.	+	.	Name=Days_to_silk;B73v2_pos=1:241193728;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246892347	246892446	.	+	.	Name=Days_to_silk;B73v2_pos=1:241215242;1allele=T/C;version=Hapmap2;RS=rs1063048499;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	246893622	246893721	.	+	.	Name=Days_to_silk;B73v2_pos=1:241216517;1allele=C/T;version=Hapmap2;RS=rs128910351;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	246893665	246893764	.	+	.	Name=Days_to_silk;B73v2_pos=1:241216560;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	246897264	246897363	.	+	.	Name=Tassel_length;B73v2_pos=1:241220159;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	247073919	247074018	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:241388862;1allele=A/G;version=Hapmap2;RS=rs128911243;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	247074751	247074850	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:241389694;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	247165922	247166021	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:241486675;1allele=C/T;version=Hapmap2;RS=rs1062437640;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	247177678	247177777	.	+	.	Name=Tassel_length;B73v2_pos=1:241498433;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	247177798	247177897	.	+	.	Name=Tassel_length;B73v2_pos=1:241498553;1allele=T/C;version=Hapmap2;RS=rs128911655;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	247268718	247268817	.	+	.	Name=Tassel_length;B73v2_pos=1:241587569;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	247291616	247291716	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:241610468;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	247454681	247454780	.	+	.	Name=Tassel_length;B73v2_pos=1:241761292;1allele=G/A;version=Hapmap2;RS=rs128912379;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	248075912	248076011	.	+	.	Name=Days_to_silk;B73v2_pos=1:242400612;1allele=A/T;version=Hapmap2;RS=rs128913275;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	248089594	248089693	.	+	.	Name=Height_above_ear;B73v2_pos=1:242414296;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248089602	248089701	.	+	.	Name=Height_above_ear;B73v2_pos=1:242414304;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248219206	248219305	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:242545024;1allele=T/C;version=Hapmap2;RS=rs276506012;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	248233057	248233156	.	+	.	Name=Glucose;B73v2_pos=1:242558874;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248233057	248233156	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:242558874;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248352067	248352166	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:242682646;1allele=G/A;version=Hapmap2;RS=rs128914183;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	248452064	248452163	.	+	.	Name=Stalk_strength;B73v2_pos=1:242769033;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248453952	248454051	.	+	.	Name=Stalk_strength;B73v2_pos=1:242770921;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248467065	248467164	.	+	.	Name=Leaf_width;B73v2_pos=1:242784034;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248604266	248604365	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:242918559;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248813484	248813583	.	+	.	Name=Glucose;B73v2_pos=1:243144214;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248839130	248839229	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:243117580;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	248841514	248841613	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:243115196;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249167921	249168020	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:243462351;1allele=C/G;version=Hapmap2;RS=rs128915503;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	249168067	249168166	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:243462497;1allele=C/T;version=Hapmap2;RS=rs276507709;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	249201322	249201421	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:243495120;1allele=C/A;version=Hapmap1;RS=rs131870763;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	249293012	249293111	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:243585622;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249362406	249362505	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:243654921;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249420891	249420990	.	+	.	Name=Days_to_silk;B73v2_pos=1:243712617;1allele=C/A;version=Hapmap2;RS=rs726600085;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	249440862	249440961	.	+	.	Name=Days_to_silk;B73v2_pos=1:243733081;1allele=A/T;version=Hapmap2;RS=rs1062776236;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	249497536	249497635	.	+	.	Name=Days_to_silk;B73v2_pos=1:243790171;1allele=G/A;version=Hapmap2;RS=rs1064357306;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	249499108	249499207	.	+	.	Name=Tassel_length;B73v2_pos=1:243791743;1allele=A/G;version=Hapmap2;RS=rs724734060;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	249499636	249499735	.	+	.	Name=Leaf_length;B73v2_pos=1:243792271;1allele=A/G;version=Hapmap2;RS=rs1061035787;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	249524013	249524112	.	+	.	Name=Leaf_length;B73v2_pos=1:243816647;1allele=T/C;version=Hapmap2;RS=rs1060881703;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	249568646	249568745	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:243860190;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249694849	249694948	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:243985874;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249694849	249694948	.	+	.	Name=Plant_height;B73v2_pos=1:243985874;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249694849	249694948	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:243985874;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249743962	249744061	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:244035845;1allele=C/T;version=Hapmap2;RS=rs724532870;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	249745718	249745817	.	+	.	Name=Leaf_length;B73v2_pos=1:244037601;1allele=T/C;version=Hapmap2;RS=rs724252441;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	249746486	249746585	.	+	.	Name=Leaf_length;B73v2_pos=1:244038369;1allele=T/C;version=Hapmap2;RS=rs727346139;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	249753660	249753759	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:244045545;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249757839	249757938	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:244049724;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249760444	249760543	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:244052329;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249821584	249821683	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:244110749;1allele=G/A;version=Hapmap2;RS=rs726601501;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	249831203	249831302	.	+	.	Name=Ear_height;B73v2_pos=1:244120368;1allele=T/C;version=Hapmap2;RS=rs830658599;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	249836956	249837053	.	+	.	Name=Ear_height;B73v2_pos=1:244126209;1allele=A/G;version=Hapmap2;RS=rs276508423;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	249838338	249838437	.	+	.	Name=Leaf_length;B73v2_pos=1:244127593;1allele=T/C;version=Hapmap2;RS=rs1062246203;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	249921652	249921751	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:244209388;1allele=T/C;version=Hapmap2;RS=rs128916108;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	249933353	249933452	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:244221089;1allele=T/G;version=Hapmap2;RS=rs128916159;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	249933353	249933452	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:244221089;1allele=T/G;version=Hapmap2;RS=rs128916159;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	249947711	249947810	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:244236039;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	249964363	249964462	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:244252695;1allele=G/A;version=Hapmap2;RS=rs128916254;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	249964363	249964462	.	+	.	Name=Plant_height;B73v2_pos=1:244252695;1allele=G/A;version=Hapmap2;RS=rs128916254;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	249970963	249971062	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:244259297;1allele=G/A;version=Hapmap2;RS=rs128916280;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	249975363	249975462	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:244263697;1allele=A/G;version=Hapmap2;RS=rs128916309;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	250001734	250001833	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:244288808;1allele=A/G;version=Hapmap2;RS=rs805961671;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	250001742	250001841	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:244288816;1allele=A/G;version=Hapmap2;RS=rs1060518346;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	250005478	250005577	.	+	.	Name=Days_to_silk;B73v2_pos=1:244292553;1allele=G/A;version=Hapmap2;RS=rs1064515776;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	250005815	250005914	.	+	.	Name=Leaf_length;B73v2_pos=1:244292890;1allele=C/T;version=Hapmap1;RS=rs131871197;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	250012448	250012547	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:244297642;1allele=A/T;version=Hapmap2;RS=rs128916391;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	250021423	250021522	.	+	.	Name=Days_to_silk;B73v2_pos=1:244306617;1allele=G/A;version=Hapmap2;RS=rs1061436151;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	250022164	250022263	.	+	.	Name=Height_above_ear;B73v2_pos=1:244307358;1allele=T/C;version=Hapmap2;RS=rs1062602117;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	250072278	250072377	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:244357383;1allele=T/C;version=Hapmap2;RS=rs1061128603;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	250073949	250074048	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:244359054;1allele=A/C;version=Hapmap2;RS=rs1061336822;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	250095428	250095527	.	+	.	Name=Plant_height;B73v2_pos=1:244380533;1allele=T/C;version=Hapmap2;RS=rs128916606;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	250095428	250095527	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:244380533;1allele=T/C;version=Hapmap2;RS=rs128916606;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	250111754	250111853	.	+	.	Name=Tassel_length;B73v2_pos=1:244396867;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	250140326	250140425	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:244477978;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	250145881	250145980	.	+	.	Name=Plant_height;B73v2_pos=1:244465430;1allele=A/G;version=Hapmap2;RS=rs276509387;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	250159993	250160092	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:244411119;1allele=T/C;version=Hapmap2;RS=rs724266990;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	250299671	250299770	.	+	.	Name=Leaf_length;B73v2_pos=1:244639520;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	250362408	250362507	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:244600986;1allele=T/G;version=Hapmap2;RS=rs128917471;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	250368119	250368218	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:244606697;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	250420467	250420566	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:244683405;1allele=T/C;version=Hapmap2;RS=rs128917829;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	251224881	251224980	.	+	.	Name=Leaf_length;B73v2_pos=1:245480077;1allele=C/G;version=Hapmap2;RS=rs131871820;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	251238779	251238878	.	+	.	Name=Stalk_strength;B73v2_pos=1:245493322;1allele=G/A;version=Hapmap2;RS=rs128918891;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	251267762	251267861	.	+	.	Name=Stalk_strength;B73v2_pos=1:245522393;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251407769	251407868	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:245743906;1allele=A/G;version=Hapmap2;RS=rs276510962;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	251431623	251431722	.	+	.	Name=Tassel_length;B73v2_pos=1:245792726;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251444626	251444725	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:245805728;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251450907	251451006	.	+	.	Name=Tassel_length;B73v2_pos=1:245749936;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251504823	251504922	.	+	.	Name=Tassel_length;B73v2_pos=1:245855416;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251531224	251531323	.	+	.	Name=Total_amino_acids;B73v2_pos=1:245881818;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251532800	251532899	.	+	.	Name=Days_to_silk;B73v2_pos=1:245883394;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251533934	251534033	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:245884528;1allele=C/T;version=Hapmap2;RS=rs1062653861;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	251613400	251613499	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:245953924;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251633864	251633963	.	+	.	Name=Nitrate;B73v2_pos=1:245968423;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251700075	251700174	.	+	.	Name=Fructose;B73v2_pos=1:246052707;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	251929456	251929555	.	+	.	Name=Nitrate;B73v2_pos=1:246280091;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252004944	252005043	.	+	.	Name=Cob_diameter;B73v2_pos=1:246356536;1allele=G/T;version=Hapmap2;RS=rs1061374912;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	252004961	252005060	.	+	.	Name=Cob_diameter;B73v2_pos=1:246356553;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252024918	252025017	.	+	.	Name=Nitrate;B73v2_pos=1:246376602;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252063447	252063546	.	+	.	Name=Tassel_length;B73v2_pos=1:246415126;1allele=T/C;version=Hapmap2;RS=rs1061025293;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	252125046	252125145	.	+	.	Name=Nitrate;B73v2_pos=1:246476730;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252130217	252130316	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:246481901;1allele=GA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252166029	252166128	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:246517713;1allele=A/C;version=Hapmap2;RS=rs1061481469;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	252203654	252203753	.	+	.	Name=Stalk_strength;B73v2_pos=1:246555338;1allele=A/G;version=Hapmap2;RS=rs838942191;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	252300029	252300128	.	+	.	Name=Stalk_strength;B73v2_pos=1:246648392;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252334924	252335023	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:246683289;1allele=C/T;version=Hapmap2;RS=rs128920791;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	252388804	252388903	.	+	.	Name=Tassel_length;B73v2_pos=1:246736771;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252448425	252448524	.	+	.	Name=Ear_height;B73v2_pos=1:246808655;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252448511	252448610	.	+	.	Name=Ear_height;B73v2_pos=1:246808569;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252453427	252453514	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:246811373;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	252575323	252575422	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:246914749;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	253337903	253338002	.	+	.	Name=Plant_height;B73v2_pos=1:247260043;1allele=T/C;version=Hapmap2;RS=rs1062567915;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	253541604	253541703	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:247460406;1allele=C/T;version=Hapmap2;RS=rs726781781;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	253629797	253629896	.	+	.	Name=Starch;B73v2_pos=1:247537233;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	253630948	253631047	.	+	.	Name=Leaf_length;B73v2_pos=1:247538384;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	253658374	253658473	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:247577070;1allele=C/T;version=Hapmap2;RS=rs1062159154;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	253670288	253670387	.	+	.	Name=Tassel_length;B73v2_pos=1:247600514;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	253985796	253985895	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:247941256;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	253985796	253985895	.	+	.	Name=Plant_height;B73v2_pos=1:247941256;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	253993840	253993939	.	+	.	Name=Ear_height;B73v2_pos=1:247949300;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254035260	254035359	.	+	.	Name=Tassel_length;B73v2_pos=1:247989305;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254051964	254052063	.	+	.	Name=Tassel_length;B73v2_pos=1:248006018;1allele=A/G;version=Hapmap2;RS=rs1060987012;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	254091360	254091459	.	+	.	Name=Tassel_length;B73v2_pos=1:248039160;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254159648	254159747	.	+	.	Name=Starch;B73v2_pos=1:248106795;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254208130	254208229	.	+	.	Name=Ear_height;B73v2_pos=1:248155276;1allele=T/C;version=Hapmap2;RS=rs276514712;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	254411564	254411663	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:248419214;1allele=A/T;version=Hapmap2;RS=rs128923028;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	254425833	254425932	.	+	.	Name=Days_to_silk;B73v2_pos=1:248433483;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254540129	254540228	.	+	.	Name=Leaf_length;B73v2_pos=1:248550077;1allele=T/C;version=Hapmap2;RS=rs1064437682;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	254592258	254592357	.	+	.	Name=Days_to_silk;B73v2_pos=1:248594906;1allele=A/G;version=Hapmap2;RS=rs128923401;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	254627697	254627796	.	+	.	Name=Leaf_length;B73v2_pos=1:248630348;1allele=A/T;version=Hapmap2;RS=rs276515380;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	254704461	254704560	.	+	.	Name=Tassel_length;B73v2_pos=1:248686508;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254705205	254705304	.	+	.	Name=Days_to_silk;B73v2_pos=1:248685764;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254840786	254840885	.	+	.	Name=Nitrate;B73v2_pos=1:248844282;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254843160	254843259	.	+	.	Name=Plant_height;B73v2_pos=1:248846656;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254865904	254866003	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:248869402;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	254902742	254902841	.	+	.	Name=Nitrate;B73v2_pos=1:249020831;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255018914	255019013	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249106684;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255086108	255086207	.	+	.	Name=Nitrate;B73v2_pos=1:249176097;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255086225	255086324	.	+	.	Name=Stalk_strength;B73v2_pos=1:249176214;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255086236	255086335	.	+	.	Name=Stalk_strength;B73v2_pos=1:249176225;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255087550	255087649	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249177538;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255088344	255088443	.	+	.	Name=Stalk_strength;B73v2_pos=1:249178332;1allele=G/A;version=Hapmap2;RS=rs131874310;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	255101662	255101761	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249191653;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255104129	255104228	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:249194120;1allele=AC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255136280	255136379	.	+	.	Name=Nitrate;B73v2_pos=1:249225775;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255227823	255227922	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:249315268;1allele=T/G;version=Hapmap2;RS=rs838012355;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	255227823	255227922	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:249315268;1allele=T/G;version=Hapmap2;RS=rs838012355;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	255236237	255236336	.	+	.	Name=Leaf_length;B73v2_pos=1:249323682;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255237235	255237334	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:249324680;1allele=A/G;version=Hapmap2;RS=rs128924445;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	255307203	255307302	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249392060;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255328401	255328500	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:249413039;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255333244	255333343	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:249417882;1allele=A/C;version=Hapmap2;RS=rs128924733;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	255333471	255333570	.	+	.	Name=Plant_height;B73v2_pos=1:249418109;1allele=/ACC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255334209	255334308	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:249418847;1allele=G/T;version=Hapmap1;RS=rs276516452;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	255335052	255335151	.	+	.	Name=Plant_height;B73v2_pos=1:249419690;1allele=T/C;version=Hapmap2;RS=rs131874581;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	255350913	255351012	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:249432922;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255460482	255460581	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:249544504;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255531220	255531319	.	+	.	Name=Starch;B73v2_pos=1:249594770;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255626082	255626181	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:249704263;1allele=G/A;version=Hapmap2;RS=rs1063231954;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	255696345	255696444	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:249750319;1allele=G/A;version=Hapmap2;RS=rs725992413;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	255697888	255697987	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249751862;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255774905	255775004	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249843393;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	255793344	255793443	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249861832;1allele=G/A;version=Hapmap2;RS=rs1061782005;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	256194929	256195028	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:250038945;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	256298500	256298599	.	+	.	Name=Starch;B73v2_pos=1:250141537;1allele=C/A;version=Hapmap2;RS=rs1063981586;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	256422027	256422126	.	+	.	Name=Starch;B73v2_pos=1:250277678;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	256464749	256464848	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:250310737;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	256464761	256464860	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:250310749;1allele=G/T;version=Hapmap2;RS=rs131877654;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	256508536	256508635	.	+	.	Name=Cob_diameter;B73v2_pos=1:250354325;1allele=C/T;version=Hapmap2;RS=rs724592716;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	256642524	256642623	.	+	.	Name=Starch;B73v2_pos=1:250455268;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	256659942	256660041	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:250501747;1allele=A/G;version=Hapmap2;RS=rs1062954994;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	256659942	256660041	.	+	.	Name=Plant_height;B73v2_pos=1:250501747;1allele=A/G;version=Hapmap2;RS=rs1062954994;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	256692326	256692425	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:250534142;1allele=T/C;version=Hapmap2;RS=rs276518481;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	256692326	256692425	.	+	.	Name=Plant_height;B73v2_pos=1:250534142;1allele=T/C;version=Hapmap2;RS=rs276518481;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	256712273	256712372	.	+	.	Name=Cob_diameter;B73v2_pos=1:250554362;1allele=G/A;version=Hapmap2;RS=rs276518528;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	256722166	256722265	.	+	.	Name=Cob_diameter;B73v2_pos=1:250563700;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	256734294	256734393	.	+	.	Name=Tassel_length;B73v2_pos=1:250575828;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	256754811	256754910	.	+	.	Name=Plant_height;B73v2_pos=1:250596351;1allele=G/A;version=Hapmap2;RS=rs1062617873;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	257036995	257037094	.	+	.	Name=Cob_diameter;B73v2_pos=1:250865584;1allele=G/A;version=Hapmap2;RS=rs837816724;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	257064019	257064118	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:250892599;1allele=A/C;version=Hapmap2;RS=rs131877192;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	257064086	257064185	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:250892666;1allele=C/T;version=Hapmap2;RS=rs276518878;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257067532	257067631	.	+	.	Name=Leaf_width;B73v2_pos=1:250896112;1allele=T/A;version=Hapmap2;RS=rs131877225;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	257078309	257078408	.	+	.	Name=Days_to_silk;B73v2_pos=1:250906897;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257078412	257078511	.	+	.	Name=Days_to_silk;B73v2_pos=1:250907000;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257079291	257079390	.	+	.	Name=Cob_diameter;B73v2_pos=1:250907874;1allele=T/C;version=Hapmap2;RS=rs128928454;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257080808	257080907	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:250909391;1allele=C/A;version=Hapmap2;RS=rs724827136;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	257216271	257216370	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251041793;1allele=G/C;version=Hapmap2;RS=rs846855153;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	257283401	257283500	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251109276;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257284028	257284127	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251109903;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257288289	257288388	.	+	.	Name=Tassel_length;B73v2_pos=1:251114158;1allele=T/C;version=Hapmap2;RS=rs819299841;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257318290	257318389	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:251143915;1allele=C/T;version=Hapmap2;RS=rs128928141;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	257331969	257332068	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251157594;1allele=G/C;version=Hapmap2;RS=rs806040584;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	257331969	257332068	.	+	.	Name=Plant_height;B73v2_pos=1:251157594;1allele=G/C;version=Hapmap2;RS=rs806040584;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	257342812	257342911	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251168434;1allele=A/T;version=Hapmap2;RS=rs1061809572;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	257460769	257460868	.	+	.	Name=Nitrate;B73v2_pos=1:251285659;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257558672	257558771	.	+	.	Name=Plant_height;B73v2_pos=1:251388518;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257592111	257592210	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251423889;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257592111	257592210	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:251423889;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257592111	257592210	.	+	.	Name=Plant_height;B73v2_pos=1:251423889;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257594629	257594728	.	+	.	Name=Plant_height;B73v2_pos=1:251426407;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257594660	257594759	.	+	.	Name=Plant_height;B73v2_pos=1:251426438;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257598166	257598265	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251429944;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257611334	257611433	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251443115;1allele=C/G;version=Hapmap1;RS=rs131876412;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	257642720	257642819	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251465342;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257789960	257790059	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251609873;1allele=G/A;version=Hapmap2;RS=rs1060672948;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	257790702	257790801	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:251610615;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257802437	257802536	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:251622351;1allele=G/A;version=Hapmap1;RS=rs131876238;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	257802462	257802561	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:251622376;1allele=TCCG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257807163	257807262	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:251627065;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257807574	257807673	.	+	.	Name=Plant_height;B73v2_pos=1:251627476;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257807602	257807701	.	+	.	Name=Plant_height;B73v2_pos=1:251627504;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257807602	257807701	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:251627504;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257807995	257808094	.	+	.	Name=Plant_height;B73v2_pos=1:251627897;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257808416	257808515	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:251628318;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257808867	257808966	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251628769;1allele=G/A;version=Hapmap2;RS=rs128927717;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	257808984	257809083	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:251628886;1allele=C/T;version=Hapmap2;RS=rs128927714;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	257809460	257809559	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:251629362;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257813519	257813618	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251633421;1allele=G/A;version=Hapmap2;RS=rs128927674;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	257815004	257815103	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251634906;1allele=G/A;version=Hapmap2;RS=rs128927662;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	257815397	257815496	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251635299;1allele=T/C;version=Hapmap2;RS=rs727474726;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257815820	257815919	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251635722;1allele=C/T;version=Hapmap2;RS=rs726521519;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257816672	257816771	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:251636574;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257817157	257817256	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251637059;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257818368	257818467	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:251638270;1allele=G/A;version=Hapmap2;RS=rs128927630;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	257818419	257818518	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251638321;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257818702	257818801	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251638604;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257819396	257819495	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251639298;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257820392	257820491	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251640294;1allele=C/T;version=Hapmap2;RS=rs128927616;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257820392	257820491	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:251640294;1allele=C/T;version=Hapmap2;RS=rs128927616;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257822020	257822119	.	+	.	Name=Starch;B73v2_pos=1:251641922;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257855386	257855485	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251675301;1allele=T/C;version=Hapmap2;RS=rs1062669781;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257912291	257912390	.	+	.	Name=Nitrate;B73v2_pos=1:251731464;1allele=A/T;version=Hapmap2;RS=rs837978667;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	257912588	257912687	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:251731761;1allele=C/A;version=Hapmap1;RS=rs131876071;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	257912889	257912988	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:251732062;1allele=A/G;version=Hapmap1;RS=rs813648127;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	257924131	257924230	.	+	.	Name=Tassel_length;B73v2_pos=1:251743304;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257937583	257937682	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251756757;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	257991725	257991824	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251861471;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258002179	258002278	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:251870204;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258072629	258072728	.	+	.	Name=Nitrate;B73v2_pos=1:251886379;1allele=T/C;version=Hapmap2;RS=rs1061095451;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	258077121	258077220	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:251890871;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258174849	258174948	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:251988615;1allele=G/A;version=Hapmap2;RS=rs818419178;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	258184147	258184246	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:251997913;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258394569	258394668	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:252211760;1allele=C/T;version=Hapmap2;RS=rs1061397920;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	258396677	258396776	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:252213868;1allele=G/A;version=Hapmap2;RS=rs128926795;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	258438630	258438729	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:252253868;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258495054	258495153	.	+	.	Name=Nitrate;B73v2_pos=1:252302011;1allele=C/T;version=Hapmap2;RS=rs1060785318;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	258511609	258511708	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:252322199;1allele=C/A;version=Hapmap2;RS=rs724466140;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	258644116	258644215	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:252453475;1allele=A/T;version=Hapmap2;RS=rs131875666;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	258644266	258644365	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:252453625;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258726892	258726991	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:252520712;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258741478	258741577	.	+	.	Name=Stalk_strength;B73v2_pos=1:252535298;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	258999960	259000059	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:252794762;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259004735	259004834	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:252799537;1allele=T/G;version=Hapmap2;RS=rs724316471;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	259127659	259127758	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:252923771;1allele=G/A;version=Hapmap2;RS=rs1064131539;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	259127764	259127863	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:252923876;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259131145	259131244	.	+	.	Name=Tassel_length;B73v2_pos=1:252927257;1allele=G/C;version=Hapmap2;RS=rs131875421;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	259231520	259231602	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:253019543;1allele=G/A;version=Hapmap2;RS=rs276522109;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	259267332	259267431	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253065018;1allele=G/T;version=Hapmap2;RS=rs128925686;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	259284832	259284931	.	+	.	Name=Tassel_length;B73v2_pos=1:253082518;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259311142	259311241	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253108830;1allele=C/A;version=Hapmap1;RS=rs128925620;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	259311810	259311909	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:253109498;1allele=G/C;version=Hapmap2;RS=rs276522349;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	259313552	259313651	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:253111240;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259317740	259317839	.	+	.	Name=Tassel_length;B73v2_pos=1:253115428;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259318496	259318595	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:253116184;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259318508	259318607	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:253116196;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259318529	259318628	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:253116217;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259337917	259338016	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:253135544;1allele=G/A;version=Hapmap2;RS=rs811995953;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	259354822	259354921	.	+	.	Name=Nitrate;B73v2_pos=1:253152446;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259355938	259356037	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253153562;1allele=C/G;version=Hapmap2;RS=rs276522499;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	259365346	259365445	.	+	.	Name=Nitrate;B73v2_pos=1:253162970;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259689244	259689343	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:253239377;1allele=C/T;version=Hapmap2;RS=rs276522566;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	259689244	259689343	.	+	.	Name=Plant_height;B73v2_pos=1:253239377;1allele=C/T;version=Hapmap2;RS=rs276522566;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	259689244	259689343	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253239377;1allele=C/T;version=Hapmap2;RS=rs276522566;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	259689245	259689344	.	+	.	Name=Leaf_length;B73v2_pos=1:253239378;1allele=C/A;version=Hapmap2;RS=rs276522567;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	259730793	259730892	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:253263813;1allele=G/A;version=Hapmap2;RS=rs128929885;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	259732310	259732409	.	+	.	Name=Plant_height;B73v2_pos=1:253265330;1allele=G/T;version=Hapmap2;RS=rs276522602;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	259732310	259732409	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253265330;1allele=G/T;version=Hapmap2;RS=rs276522602;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	259733203	259733302	.	+	.	Name=Leaf_width;B73v2_pos=1:253266223;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259735336	259735435	.	+	.	Name=Days_to_silk;B73v2_pos=1:253268356;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259735362	259735461	.	+	.	Name=Days_to_silk;B73v2_pos=1:253268382;1allele=C/T;version=Hapmap2;RS=rs1063836549;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	259746626	259746725	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:253279639;1allele=C/T;version=Hapmap2;RS=rs276522686;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	259767061	259767160	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:253298173;1allele=T/A;version=Hapmap2;RS=rs276522719;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	259771340	259771439	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:253302452;1allele=A/G;version=Hapmap2;RS=rs55623616;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	259779600	259779699	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253310712;1allele=C/A;version=Hapmap2;RS=rs276522795;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	259827503	259827602	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:253358623;1allele=G/A;version=Hapmap2;RS=rs1061073491;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	259847975	259848074	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:253388293;1allele=G/A;version=Hapmap1;RS=rs131878373;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	259954881	259954980	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:253496759;1allele=C/T;version=Hapmap2;RS=rs806803689;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	259955273	259955372	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:253497151;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259956192	259956291	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:253498070;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259958087	259958186	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:253499965;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259959798	259959897	.	+	.	Name=Tassel_length;B73v2_pos=1:253501676;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	259962465	259962564	.	+	.	Name=Starch;B73v2_pos=1:253504343;1allele=C/T;version=Hapmap2;RS=rs840170594;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	259973579	259973678	.	+	.	Name=Starch;B73v2_pos=1:253515457;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260036806	260036905	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:253580789;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260054041	260054140	.	+	.	Name=Starch;B73v2_pos=1:253597046;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260064545	260064644	.	+	.	Name=Starch;B73v2_pos=1:253607548;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260064821	260064920	.	+	.	Name=Stalk_strength;B73v2_pos=1:253607824;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260065024	260065123	.	+	.	Name=Ear_height;B73v2_pos=1:253608027;1allele=A/G;version=Hapmap2;RS=rs131878698;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260066029	260066128	.	+	.	Name=Leaf_length;B73v2_pos=1:253609032;1allele=G/C;version=Hapmap2;RS=rs276523079;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	260136166	260136265	.	+	.	Name=Ear_height;B73v2_pos=1:253671695;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260171126	260171225	.	+	.	Name=Starch;B73v2_pos=1:253713932;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260176793	260176892	.	+	.	Name=Stalk_strength;B73v2_pos=1:253719602;1allele=A/G;version=Hapmap2;RS=rs1062742629;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	260214645	260214744	.	+	.	Name=Ear_height;B73v2_pos=1:253763372;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260230016	260230115	.	+	.	Name=Plant_height;B73v2_pos=1:253778743;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260245072	260245171	.	+	.	Name=Ear_height;B73v2_pos=1:253794071;1allele=A/G;version=Hapmap2;RS=rs128930696;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	260245602	260245701	.	+	.	Name=Ear_height;B73v2_pos=1:253794601;1allele=C/T;version=Hapmap2;RS=rs276523711;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	260245602	260245701	.	+	.	Name=Plant_height;B73v2_pos=1:253794601;1allele=C/T;version=Hapmap2;RS=rs276523711;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	260246444	260246543	.	+	.	Name=Stalk_strength;B73v2_pos=1:253795391;1allele=G/A;version=Hapmap2;RS=rs1064514674;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260343666	260343765	.	+	.	Name=Protein;B73v2_pos=1:253892928;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260343800	260343899	.	+	.	Name=Glucose;B73v2_pos=1:253893062;1allele=C/A;version=Hapmap2;RS=rs276523878;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	260348964	260349063	.	+	.	Name=Plant_height;B73v2_pos=1:253898226;1allele=T/G;version=Hapmap2;RS=rs128930862;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	260353353	260353452	.	+	.	Name=Ear_height;B73v2_pos=1:253902615;1allele=G/A;version=Hapmap2;RS=rs276523926;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	260356879	260356978	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253906141;1allele=C/T;version=Hapmap2;RS=rs128930918;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	260358569	260358668	.	+	.	Name=Ear_height;B73v2_pos=1:253907831;1allele=C/A;version=Hapmap2;RS=rs131879014;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	260358675	260358774	.	+	.	Name=Ear_height;B73v2_pos=1:253907937;1allele=T/C;version=Hapmap2;RS=rs131879018;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	260360707	260360806	.	+	.	Name=Plant_height;B73v2_pos=1:253909969;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260360855	260360954	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253910117;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260360855	260360954	.	+	.	Name=Plant_height;B73v2_pos=1:253910117;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260362535	260362634	.	+	.	Name=Tassel_length;B73v2_pos=1:253911797;1allele=T/A;version=Hapmap2;RS=rs829834871;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	260364196	260364295	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:253913458;1allele=A/G;version=Hapmap2;RS=rs131879086;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260399905	260400004	.	+	.	Name=Ear_height;B73v2_pos=1:253949166;1allele=A/G;version=Hapmap1;RS=rs276524008;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	260411252	260411351	.	+	.	Name=Plant_height;B73v2_pos=1:253960535;1allele=T/C;version=Hapmap2;RS=rs128930986;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	260415238	260415337	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:253964521;1allele=G/A;version=Hapmap2;RS=rs1060947757;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260443777	260443876	.	+	.	Name=Nitrate;B73v2_pos=1:253993061;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260525461	260525560	.	+	.	Name=Leaf_length;B73v2_pos=1:254075400;1allele=T/A;version=Hapmap1;RS=rs131879215;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	260546321	260546420	.	+	.	Name=Stalk_strength;B73v2_pos=1:254096148;1allele=A/G;version=Hapmap2;RS=rs128931144;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	260608420	260608519	.	+	.	Name=Stalk_strength;B73v2_pos=1:254158247;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260644424	260644523	.	+	.	Name=Stalk_strength;B73v2_pos=1:254194250;1allele=G/A;version=Hapmap2;RS=rs128931280;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260659320	260659419	.	+	.	Name=Stalk_strength;B73v2_pos=1:254209148;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260665491	260665590	.	+	.	Name=Stalk_strength;B73v2_pos=1:254215320;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260697852	260697951	.	+	.	Name=Ear_height;B73v2_pos=1:254246109;1allele=A/G;version=Hapmap2;RS=rs276524527;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260702729	260702828	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:254250986;1allele=A/T;version=Hapmap2;RS=rs128931400;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	260712521	260712620	.	+	.	Name=Leaf_length;B73v2_pos=1:254260775;1allele=A/G;version=Hapmap2;RS=rs128931427;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	260712681	260712780	.	+	.	Name=Leaf_length;B73v2_pos=1:254260935;1allele=G/A;version=Hapmap2;RS=rs128931432;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260712807	260712906	.	+	.	Name=Leaf_length;B73v2_pos=1:254261061;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260714105	260714204	.	+	.	Name=Leaf_length;B73v2_pos=1:254262359;1allele=T/A;version=Hapmap2;RS=rs128931439;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	260714894	260714992	.	+	.	Name=Leaf_length;B73v2_pos=1:254263148;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260749394	260749493	.	+	.	Name=Plant_height;B73v2_pos=1:254331389;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260751277	260751376	.	+	.	Name=Tassel_length;B73v2_pos=1:254329506;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260818818	260818917	.	+	.	Name=Plant_height;B73v2_pos=1:254360715;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260846916	260847015	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:254399667;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260846916	260847015	.	+	.	Name=Plant_height;B73v2_pos=1:254399667;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260848780	260848879	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:254397803;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260865323	260865422	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:254384868;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	260874834	260874933	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:254430917;1allele=C/T;version=Hapmap2;RS=rs128931597;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	260905414	260905513	.	+	.	Name=Days_to_silk;B73v2_pos=1:254439805;1allele=G/A;version=Hapmap2;RS=rs726634367;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	260939262	260939361	.	+	.	Name=Leaf_width;B73v2_pos=1:254473823;1allele=T/G;version=Hapmap2;RS=rs128931918;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	260992936	260993035	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:254524784;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261050011	261050110	.	+	.	Name=Tassel_length;B73v2_pos=1:254581854;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261093270	261093369	.	+	.	Name=Tassel_length;B73v2_pos=1:254626218;1allele=A/G;version=Hapmap2;RS=rs128932501;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261143641	261143740	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:254676595;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261143641	261143740	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:254676595;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261175687	261175786	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:254688830;1allele=C/G;version=Hapmap2;RS=rs131879592;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	261247084	261247183	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:254755190;1allele=A/G;version=Hapmap2;RS=rs276525460;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261273707	261273806	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:254859972;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261300322	261300421	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:254811243;1allele=G/A;version=Hapmap2;RS=rs128932824;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261301940	261302039	.	+	.	Name=Days_to_silk;B73v2_pos=1:254812861;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261394305	261394404	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:254893760;1allele=A/C;version=Hapmap2;RS=rs128932994;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	261397223	261397322	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:254896678;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261455476	261455575	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:254982664;1allele=A/C;version=Hapmap2;RS=rs276525802;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	261456607	261456706	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:254983795;1allele=G/C;version=Hapmap2;RS=rs128933042;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	261541860	261541959	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:255085039;1allele=A/G;version=Hapmap1;RS=rs849107988;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	261610552	261610651	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:255148458;1allele=A/G;version=Hapmap2;RS=rs1062478563;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261724533	261724632	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:255258183;1allele=G/A;version=Hapmap2;RS=rs128933223;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261724533	261724632	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:255258183;1allele=G/A;version=Hapmap2;RS=rs128933223;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261730837	261730936	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:255264437;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261730927	261731026	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:255264527;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261785247	261785346	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:255318850;1allele=G/T;version=Hapmap2;RS=rs128933303;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	261796169	261796268	.	+	.	Name=Leaf_length;B73v2_pos=1:255329769;1allele=G/A;version=Hapmap2;RS=rs276526095;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	261796361	261796460	.	+	.	Name=Leaf_length;B73v2_pos=1:255329961;1allele=C/T;version=Hapmap2;RS=rs276526098;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	261796882	261796981	.	+	.	Name=Leaf_length;B73v2_pos=1:255330482;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261818740	261818839	.	+	.	Name=Ear_height;B73v2_pos=1:255352339;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261826391	261826490	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:255359990;1allele=A/G;version=Hapmap2;RS=rs128933424;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261827810	261827909	.	+	.	Name=Leaf_length;B73v2_pos=1:255361409;1allele=T/C;version=Hapmap2;RS=rs128933430;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	261839748	261839847	.	+	.	Name=Days_to_silk;B73v2_pos=1:255373347;1allele=C/T;version=Hapmap2;RS=rs1063613464;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	261841893	261841992	.	+	.	Name=Ear_height;B73v2_pos=1:255375494;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261866347	261866446	.	+	.	Name=Leaf_length;B73v2_pos=1:255401661;1allele=C/T;version=Hapmap2;RS=rs128933488;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	261882749	261882848	.	+	.	Name=Leaf_length;B73v2_pos=1:255418066;1allele=C/A;version=Hapmap2;RS=rs1061302000;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	261887099	261887198	.	+	.	Name=Leaf_length;B73v2_pos=1:255422416;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261887573	261887672	.	+	.	Name=Leaf_length;B73v2_pos=1:255422890;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261887789	261887888	.	+	.	Name=Leaf_length;B73v2_pos=1:255423107;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261889777	261889876	.	+	.	Name=Ear_height;B73v2_pos=1:255425095;1allele=G/A;version=Hapmap2;RS=rs128933534;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261900071	261900170	.	+	.	Name=Leaf_length;B73v2_pos=1:255435389;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261905962	261906061	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:255441283;1allele=A/G;version=Hapmap2;RS=rs725609805;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261910847	261910946	.	+	.	Name=Ear_height;B73v2_pos=1:255446168;1allele=G/A;version=Hapmap2;RS=rs1064332105;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	261922416	261922515	.	+	.	Name=Leaf_length;B73v2_pos=1:255462386;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261922416	261922515	.	+	.	Name=Plant_height;B73v2_pos=1:255462386;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261926538	261926637	.	+	.	Name=Leaf_length;B73v2_pos=1:255458264;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261926544	261926643	.	+	.	Name=Leaf_length;B73v2_pos=1:255458258;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	261940128	261940227	.	+	.	Name=Leaf_length;B73v2_pos=1:255473725;1allele=T/G;version=Hapmap2;RS=rs128933619;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	261952788	261952887	.	+	.	Name=Leaf_length;B73v2_pos=1:255486726;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	262037934	262038033	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:255575714;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	262038047	262038146	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:255575827;1allele=C/T;version=Hapmap2;RS=rs128933789;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	262038858	262038957	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:255576638;1allele=A/G;version=Hapmap2;RS=rs276526315;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	262102431	262102530	.	+	.	Name=Leaf_length;B73v2_pos=1:255614757;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	262193488	262193587	.	+	.	Name=Leaf_length;B73v2_pos=1:255723232;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	262193489	262193588	.	+	.	Name=Leaf_length;B73v2_pos=1:255723233;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	262352189	262352288	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:255853117;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	262403573	262403672	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:29565835;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	262489806	262489905	.	+	.	Name=Leaf_length;B73v2_pos=1:255990923;1allele=A/C;version=Hapmap2;RS=rs276526709;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	262854082	262854181	.	+	.	Name=Height_above_ear;B73v2_pos=1:256327671;1allele=G/A;version=Hapmap2;RS=rs276527139;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	262928324	262928423	.	+	.	Name=Leaf_width;B73v2_pos=1:256409445;1allele=A/C;version=Hapmap2;RS=rs1064559163;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	263001223	263001322	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:256482353;1allele=C/G;version=Hapmap2;RS=rs131880609;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	263002768	263002867	.	+	.	Name=Starch;B73v2_pos=1:256483898;1allele=G/T;version=Hapmap2;RS=rs131880636;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	263010350	263010449	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:256491480;1allele=A/G;version=Hapmap2;RS=rs131880668;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	263010429	263010528	.	+	.	Name=Ear_height;B73v2_pos=1:256491559;1allele=/CCCCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263031247	263031346	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:256512545;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263343821	263343920	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:256816408;1allele=T/C;version=Hapmap2;RS=rs1061681827;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	263349587	263349686	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:256822175;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263400637	263400736	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:256909570;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263480068	263480167	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:256938712;1allele=T/C;version=Hapmap1;RS=rs128935941;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	263549706	263549805	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:257008391;1allele=G/A;version=Hapmap1;RS=rs131881129;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	263608752	263608851	.	+	.	Name=Starch;B73v2_pos=1:257044453;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263648437	263648536	.	+	.	Name=Leaf_length;B73v2_pos=1:257105726;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263669497	263669596	.	+	.	Name=Leaf_length;B73v2_pos=1:257126805;1allele=A/G;version=Hapmap2;RS=rs833812928;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	263700688	263700787	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:257146715;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263735533	263735632	.	+	.	Name=Leaf_width;B73v2_pos=1:257191035;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263735554	263735653	.	+	.	Name=Leaf_width;B73v2_pos=1:257191056;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263735992	263736091	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:257191494;1allele=C/A;version=Hapmap1;RS=rs128936270;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	263798915	263799014	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:257254421;1allele=G/A;version=Hapmap2;RS=rs128936464;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	263829704	263829803	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:257285210;1allele=C/T;version=Hapmap2;RS=rs128936507;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	263833074	263833173	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:257288582;1allele=C/T;version=Hapmap2;RS=rs128936531;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	263841088	263841187	.	+	.	Name=Nitrate;B73v2_pos=1:257296597;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263954454	263954553	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:257410882;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263954476	263954575	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:257410904;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263954955	263955054	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:257411383;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	263998105	263998204	.	+	.	Name=Nitrate;B73v2_pos=1:257453879;1allele=G/A;version=Hapmap2;RS=rs131881437;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	264084880	264084979	.	+	.	Name=Nitrate;B73v2_pos=1:257540193;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264180306	264180405	.	+	.	Name=Ear_row_number;B73v2_pos=1:257634974;1allele=C/T;version=Hapmap2;RS=rs1062211546;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	264187156	264187255	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:257641063;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264190685	264190784	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:257644594;1allele=T/C;version=Hapmap2;RS=rs276528624;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	264195891	264195990	.	+	.	Name=Ear_row_number;B73v2_pos=1:257649800;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264330564	264330663	.	+	.	Name=Nitrate;B73v2_pos=1:257784003;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264330565	264330664	.	+	.	Name=Nitrate;B73v2_pos=1:257784004;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264340683	264340785	.	+	.	Name=Nitrate;B73v2_pos=1:257794115;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264379378	264379477	.	+	.	Name=Nitrate;B73v2_pos=1:257832808;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264389267	264389366	.	+	.	Name=Nitrate;B73v2_pos=1:257842697;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264422916	264423015	.	+	.	Name=Nitrate;B73v2_pos=1:257876197;1allele=C/T;version=Hapmap1;RS=rs131881635;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	264485383	264485482	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:257941154;1allele=G/A;version=Hapmap2;RS=rs835673112;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	264526034	264526133	.	+	.	Name=Nitrate;B73v2_pos=1:257993110;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264539398	264539497	.	+	.	Name=Nitrate;B73v2_pos=1:258007148;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264577604	264577703	.	+	.	Name=Nitrate;B73v2_pos=1:258030390;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264578642	264578741	.	+	.	Name=Nitrate;B73v2_pos=1:258031428;1allele=G/A;version=Hapmap2;RS=rs726319666;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	264579810	264579909	.	+	.	Name=Nitrate;B73v2_pos=1:258032596;1allele=G/A;version=Hapmap2;RS=rs1063149918;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	264585817	264585916	.	+	.	Name=Nitrate;B73v2_pos=1:258038603;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264755246	264755345	.	+	.	Name=Nitrate;B73v2_pos=1:258278223;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264759854	264759953	.	+	.	Name=Nitrate;B73v2_pos=1:258134320;1allele=C/T;version=Hapmap2;RS=rs131881930;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	264807375	264807474	.	+	.	Name=Nitrate;B73v2_pos=1:258247654;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264832923	264833022	.	+	.	Name=Nitrate;B73v2_pos=1:258303294;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264902938	264903037	.	+	.	Name=Nitrate;B73v2_pos=1:258363393;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264904619	264904718	.	+	.	Name=Nitrate;B73v2_pos=1:258365075;1allele=G/C;version=Hapmap2;RS=rs813541794;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	264907458	264907557	.	+	.	Name=Nitrate;B73v2_pos=1:258367913;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264937724	264937823	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:258398180;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	264980143	264980242	.	+	.	Name=Nitrate;B73v2_pos=1:258440513;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265007949	265008048	.	+	.	Name=Nitrate;B73v2_pos=1:258485258;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265139639	265139738	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:258614843;1allele=C/T;version=Hapmap2;RS=rs276529866;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	265141543	265141642	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:258616747;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265153170	265153269	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:258628373;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265169996	265170095	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:258645199;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265171217	265171316	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:258646420;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265210057	265210156	.	+	.	Name=Leaf_length;B73v2_pos=1:258681211;1allele=/TTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265210835	265210934	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:258681989;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265210990	265211089	.	+	.	Name=Days_to_silk;B73v2_pos=1:258682144;1allele=A/G;version=Hapmap2;RS=rs276530024;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	265212580	265212679	.	+	.	Name=Tassel_length;B73v2_pos=1:258683734;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265214892	265214991	.	+	.	Name=Days_to_silk;B73v2_pos=1:258686046;1allele=T/C;version=Hapmap2;RS=rs1063113213;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	265215274	265215373	.	+	.	Name=Days_to_silk;B73v2_pos=1:258686428;1allele=G/A;version=Hapmap2;RS=rs128938723;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	265216753	265216852	.	+	.	Name=Days_to_silk;B73v2_pos=1:258687907;1allele=C/T;version=Hapmap2;RS=rs128938744;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	265217874	265217973	.	+	.	Name=Days_to_silk;B73v2_pos=1:258689028;1allele=G/A;version=Hapmap2;RS=rs128938761;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	265331303	265331402	.	+	.	Name=Leaf_width;B73v2_pos=1:258804510;1allele=A/G;version=Hapmap2;RS=rs276530319;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	265353861	265353960	.	+	.	Name=Nitrate;B73v2_pos=1:258826993;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265402927	265403026	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:258876061;1allele=T/C;version=Hapmap2;RS=rs128938935;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	265453612	265453711	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:258927429;1allele=T/C;version=Hapmap2;RS=rs276530521;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	265702989	265703088	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:259169768;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265807272	265807371	.	+	.	Name=Stalk_strength;B73v2_pos=1:259275731;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265857583	265857682	.	+	.	Name=Leaf_width;B73v2_pos=1:259321115;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	265875201	265875300	.	+	.	Name=Leaf_width;B73v2_pos=1:259337048;1allele=G/A;version=Hapmap2;RS=rs276531264;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	265928760	265928859	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:259390619;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	266251690	266251789	.	+	.	Name=Days_to_silk;B73v2_pos=1:259707143;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	266400138	266400237	.	+	.	Name=Tassel_length;B73v2_pos=1:259855611;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	266442045	266442144	.	+	.	Name=Leaf_length;B73v2_pos=1:259884678;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	266490203	266490302	.	+	.	Name=Nitrate;B73v2_pos=1:259942767;1allele=C/T;version=Hapmap2;RS=rs818155499;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	266554505	266554604	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:260139978;1allele=G/A;version=Hapmap2;RS=rs128939931;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	266837628	266837727	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:260403623;1allele=A/G;version=Hapmap2;RS=rs128940134;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	266943525	266943624	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:260506339;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	266951973	266952072	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:260514787;1allele=C/T;version=Hapmap1;RS=rs131883894;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	266952085	266952184	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:260514899;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	266958195	266958294	.	+	.	Name=Total_amino_acids;B73v2_pos=1:260520525;1allele=A/G;version=Hapmap2;RS=rs825168014;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	267031327	267031426	.	+	.	Name=Nitrate;B73v2_pos=1:260589012;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	267067540	267067639	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:260614526;1allele=T/C;version=Hapmap2;RS=rs725826845;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	267277168	267277267	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:260818699;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	267282459	267282558	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:260824846;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	267857947	267858046	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:261157938;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	267869780	267869879	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:261169771;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	268089599	268089698	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:261390141;1allele=T/C;version=Hapmap2;RS=rs1063227018;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	268809504	268809603	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:262151867;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	268837208	268837307	.	+	.	Name=Stalk_strength;B73v2_pos=1:262186116;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	268854684	268854783	.	+	.	Name=Days_to_silk;B73v2_pos=1:262205753;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	268958544	268958643	.	+	.	Name=Stalk_strength;B73v2_pos=1:262308104;1allele=A/G;version=Hapmap2;RS=rs725983043;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	269049637	269049736	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:262396444;1allele=A/G;version=Hapmap2;RS=rs276535574;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	269161164	269161263	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:262507666;1allele=/ATTGTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269178891	269178990	.	+	.	Name=Plant_height;B73v2_pos=1:262525384;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269196411	269196510	.	+	.	Name=Tassel_length;B73v2_pos=1:262542904;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269577772	269577871	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:262914808;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269577807	269577906	.	+	.	Name=Days_to_silk;B73v2_pos=1:262914843;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269698899	269698998	.	+	.	Name=Tassel_length;B73v2_pos=1:263001355;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269799491	269799590	.	+	.	Name=Nitrate;B73v2_pos=1:263152375;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269807099	269807198	.	+	.	Name=Tassel_length;B73v2_pos=1:263159983;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	269849357	269849456	.	+	.	Name=Tassel_length;B73v2_pos=1:263198385;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	270280197	270280296	.	+	.	Name=Tassel_length;B73v2_pos=1:263652233;1allele=C/T;version=Hapmap2;RS=rs838893188;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	270280299	270280398	.	+	.	Name=Tassel_length;B73v2_pos=1:263652335;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	270282142	270282241	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:263654178;1allele=T/C;version=Hapmap1;RS=rs131886344;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	270284311	270284410	.	+	.	Name=Height_above_ear;B73v2_pos=1:263656347;1allele=A/G;version=Hapmap2;RS=rs276537786;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	270335984	270336083	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:263706443;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	270336256	270336355	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:263706715;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	270338786	270338885	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:263709245;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	270765087	270765186	.	+	.	Name=Stalk_strength;B73v2_pos=1:264130958;1allele=T/C;version=Hapmap2;RS=rs839597467;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	270869500	270869599	.	+	.	Name=Nitrate;B73v2_pos=1:264244895;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	271092203	271092302	.	+	.	Name=Ear_row_number;B73v2_pos=1:264504317;1allele=G/A;version=Hapmap2;RS=rs811652171;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	271099258	271099357	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:264511372;1allele=A/G;version=Hapmap2;RS=rs128943941;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	271103424	271103523	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:264515538;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	271112097	271112196	.	+	.	Name=Ear_row_number;B73v2_pos=1:264525155;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	271116465	271116564	.	+	.	Name=Tassel_length;B73v2_pos=1:264529523;1allele=C/T;version=Hapmap2;RS=rs128944047;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	271171369	271171468	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:264591140;1allele=T/C;version=Hapmap2;RS=rs1063019169;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	271394560	271394659	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:264801146;1allele=T/C;version=Hapmap2;RS=rs1063924641;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	271394995	271395094	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:264801581;1allele=C/T;version=Hapmap2;RS=rs817351604;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	271448869	271448968	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:264853522;1allele=A/G;version=Hapmap2;RS=rs725055726;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	271453535	271453634	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:264858188;1allele=C/T;version=Hapmap2;RS=rs128944161;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	271457012	271457111	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:264861665;1allele=G/A;version=Hapmap2;RS=rs128944177;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	271464972	271465071	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:264869625;1allele=G/C;version=Hapmap1;RS=rs131887202;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	271509831	271509930	.	+	.	Name=Stalk_strength;B73v2_pos=1:264918395;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	271552428	271552527	.	+	.	Name=Stalk_strength;B73v2_pos=1:264962142;1allele=AG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272068737	272068836	.	+	.	Name=Leaf_length;B73v2_pos=1:265483609;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272105226	272105325	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:265521995;1allele=C/G;version=Hapmap1;RS=rs276538917;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	272108415	272108514	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:265525184;1allele=G/C;version=Hapmap1;RS=rs131887782;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	272134425	272134524	.	+	.	Name=Tassel_length;B73v2_pos=1:265551662;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272206020	272206119	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:265620502;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272215798	272215897	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:265635841;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272222186	272222285	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:265637078;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272257627	272257726	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:265672709;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272263107	272263206	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:265678189;1allele=G/T;version=Hapmap2;RS=rs842256536;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	272280883	272280982	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:265695965;1allele=T/C;version=Hapmap2;RS=rs276539066;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	272336231	272336330	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:265751344;1allele=C/A;version=Hapmap1;RS=rs131887970;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	272437825	272437924	.	+	.	Name=Stalk_strength;B73v2_pos=1:265846981;1allele=C/T;version=Hapmap2;RS=rs724561923;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	272649532	272649631	.	+	.	Name=Height_above_ear;B73v2_pos=1:266058317;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	272756264	272756363	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:266158328;1allele=G/A;version=Hapmap1;RS=rs131888251;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	273013619	273013718	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:266454622;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	273205770	273205869	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:266647303;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	273219335	273219434	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:266660868;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	273223747	273223846	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:266665280;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	273438962	273439061	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:266871351;1allele=C/T;version=Hapmap2;RS=rs1061900988;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	273489355	273489454	.	+	.	Name=Tassel_length;B73v2_pos=1:266917363;1allele=C/G;version=Hapmap2;RS=rs276540413;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	273519820	273519919	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:266948744;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	273716751	273716850	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:267143335;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	273939966	273940065	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:267366417;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	273961780	273961879	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:267388235;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	274003148	274003247	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:267424594;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	274453972	274454071	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:267865892;1allele=C/T;version=Hapmap2;RS=rs276542329;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	274547966	274548065	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:267956137;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	274653071	274653170	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268058977;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	274671711	274671810	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268147600;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	274871973	274872072	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:268351289;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	274927391	274927490	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:268406200;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	274944309	274944408	.	+	.	Name=Stalk_strength;B73v2_pos=1:268423121;1allele=G/A;version=Hapmap2;RS=rs1062507241;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	275048728	275048827	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268544625;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	275059227	275059326	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:268555125;1allele=G/C;version=Hapmap1;RS=rs131889849;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	275080996	275081095	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268568747;1allele=T/C;version=Hapmap2;RS=rs128947843;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	275084258	275084357	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268572009;1allele=G/A;version=Hapmap2;RS=rs1061840250;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	275104288	275104387	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:268593227;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	275127684	275127783	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268616626;1allele=T/G;version=Hapmap2;RS=rs1062656407;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	275165498	275165597	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268654448;1allele=T/C;version=Hapmap2;RS=rs1063108382;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	275195429	275195528	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:268685976;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	275237535	275237634	.	+	.	Name=Days_to_silk;B73v2_pos=1:268735380;1allele=-/A;version=Hapmap1;RS=rs726970262;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	275383852	275383951	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:268877234;1allele=C/T;version=Hapmap2;RS=rs128948051;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	275525484	275525583	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:269029856;1allele=G/C;version=Hapmap2;RS=rs276544212;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	275576939	275577038	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:269082314;1allele=G/T;version=Hapmap2;RS=rs276544264;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	275636680	275636779	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:269142059;1allele=G/C;version=Hapmap2;RS=rs1062187333;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	275660187	275660286	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:269164143;1allele=C/T;version=Hapmap2;RS=rs1061511509;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	275710055	275710154	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:269214020;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	275729877	275729976	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:269233843;1allele=C/T;version=Hapmap2;RS=rs1064612703;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	275746358	275746457	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:269249374;1allele=T/A;version=Hapmap2;RS=rs276544495;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	275821477	275821576	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:269288392;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	275830560	275830659	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:269297476;1allele=G/A;version=Hapmap2;RS=rs128948565;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	275831321	275831420	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:269298237;1allele=G/A;version=Hapmap1;RS=rs276544535;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	275833975	275834074	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:269300891;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	275834044	275834143	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:269300960;1allele=A/G;version=Hapmap2;RS=rs834861669;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	275994879	275994978	.	+	.	Name=Days_to_silk;B73v2_pos=1:269482204;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276008392	276008491	.	+	.	Name=Tassel_length;B73v2_pos=1:269495720;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276009144	276009243	.	+	.	Name=Days_to_silk;B73v2_pos=1:269496473;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276009162	276009261	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:269496491;1allele=G/A;version=Hapmap2;RS=rs846898322;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	276010529	276010628	.	+	.	Name=Days_to_silk;B73v2_pos=1:269497858;1allele=T/C;version=Hapmap2;RS=rs824346448;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	276011278	276011377	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:269498607;1allele=G/C;version=Hapmap2;RS=rs805868179;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	276017391	276017490	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:269504717;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276060729	276060828	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:269546598;1allele=T/C;version=Hapmap2;RS=rs276544971;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	276060879	276060978	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:269546748;1allele=G/A;version=Hapmap2;RS=rs276544975;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	276165499	276165598	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:269637801;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276336718	276336817	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:269816025;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276390762	276390861	.	+	.	Name=Stalk_strength;B73v2_pos=1:269870403;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276424910	276425009	.	+	.	Name=Stalk_strength;B73v2_pos=1:269908748;1allele=A/G;version=Hapmap2;RS=rs276545440;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	276426191	276426290	.	+	.	Name=Stalk_strength;B73v2_pos=1:269910029;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276426194	276426293	.	+	.	Name=Stalk_strength;B73v2_pos=1:269910032;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276430907	276431006	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:269914744;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276534791	276534890	.	+	.	Name=Stalk_strength;B73v2_pos=1:270024191;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	276536606	276536705	.	+	.	Name=Stalk_strength;B73v2_pos=1:270026006;1allele=A/G;version=Hapmap2;RS=rs128949186;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	276539061	276539160	.	+	.	Name=Stalk_strength;B73v2_pos=1:270028461;1allele=A/C;version=Hapmap2;RS=rs809872727;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	276905665	276905764	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:270375817;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277032832	277032931	.	+	.	Name=Stalk_strength;B73v2_pos=1:270508968;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277147154	277147253	.	+	.	Name=Tassel_length;B73v2_pos=1:270620146;1allele=C/T;version=Hapmap2;RS=rs1064623493;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	277192938	277193037	.	+	.	Name=Days_to_silk;B73v2_pos=1:270665572;1allele=C/G;version=Hapmap2;RS=rs128949722;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	277193161	277193260	.	+	.	Name=Days_to_silk;B73v2_pos=1:270665795;1allele=C/T;version=Hapmap2;RS=rs846233972;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	277199130	277199229	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:270671765;1allele=C/T;version=Hapmap2;RS=rs131891637;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	277231748	277231847	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:270704692;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277315392	277315491	.	+	.	Name=Ear_row_number;B73v2_pos=1:270788350;1allele=T/C;version=Hapmap2;RS=rs276546970;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	277361002	277361101	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:270883516;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277444284	277444383	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:270954441;1allele=C/T;version=Hapmap2;RS=rs276547284;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	277456413	277456512	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:270966571;1allele=G/A;version=Hapmap2;RS=rs128950085;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	277496452	277496551	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:271006584;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277496460	277496559	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:271006592;1allele=G/T;version=Hapmap2;RS=rs1064109901;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	277497009	277497108	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:271007141;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277587728	277587827	.	+	.	Name=Days_to_silk;B73v2_pos=1:271062696;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277603407	277603506	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:271102494;1allele=A/G;version=Hapmap2;RS=rs1061698751;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	277604033	277604132	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:271103120;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277719828	277719927	.	+	.	Name=Stalk_strength;B73v2_pos=1:271219387;1allele=-/+;version=Hapmap2;RS=rs835696850;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	277725832	277725931	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:271225392;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	277736006	277736105	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:271235566;1allele=C/T;version=Hapmap2;RS=rs128950677;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	277834706	277834805	.	+	.	Name=Stalk_strength;B73v2_pos=1:271334275;1allele=C/T;version=Hapmap1;RS=rs131892336;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	277840262	277840361	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:271339831;1allele=A/C;version=Hapmap2;RS=rs1061881341;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	278269535	278269634	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:271750941;1allele=G/A;version=Hapmap1;RS=rs128950936;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	278278028	278278127	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:271758815;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278278152	278278251	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:271758939;1allele=T/C;version=Hapmap2;RS=rs128950946;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	278290282	278290381	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:271771063;1allele=A/G;version=Hapmap2;RS=rs1064718955;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	278306578	278306677	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:271786596;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278310057	278310156	.	+	.	Name=Plant_height;B73v2_pos=1:271790075;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278317618	278317717	.	+	.	Name=Plant_height;B73v2_pos=1:271797636;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278448100	278448199	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:271924920;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278493017	278493116	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:271937856;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278505791	278505890	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:271969588;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278825025	278825124	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:272273124;1allele=TT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278891324	278891423	.	+	.	Name=Stalk_strength;B73v2_pos=1:272341476;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278897427	278897526	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:272347578;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278903618	278903717	.	+	.	Name=Plant_height;B73v2_pos=1:272353769;1allele=G/A;version=Hapmap1;RS=rs128951831;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	278969737	278969836	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:272442037;1allele=A/G;version=Hapmap1;RS=rs128951871;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	278971300	278971399	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:272443600;1allele=G/A;version=Hapmap2;RS=rs276549343;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	278982124	278982224	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:272454426;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	278994256	278994355	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:272500785;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	279117481	279117580	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:272582730;1allele=A/T;version=Hapmap2;RS=rs1063837340;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	279392308	279392407	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:272831208;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	279395532	279395631	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:272834432;1allele=T/G;version=Hapmap2;RS=rs128952213;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	279395532	279395631	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:272834432;1allele=T/G;version=Hapmap2;RS=rs128952213;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	279395647	279395746	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:272834547;1allele=G/T;version=Hapmap2;RS=rs276550062;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	279403494	279403593	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:272842395;1allele=A/G;version=Hapmap2;RS=rs128952189;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	279408239	279408338	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:272870479;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	279488733	279488832	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:272930668;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	279657144	279657243	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:273097554;1allele=G/C;version=Hapmap1;RS=rs131893913;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	279850659	279850758	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:273281545;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	279869494	279869593	.	+	.	Name=Tassel_length;B73v2_pos=1:273300378;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	279880653	279880752	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:273311537;1allele=A/G;version=Hapmap2;RS=rs1062073182;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	279964355	279964454	.	+	.	Name=Tassel_length;B73v2_pos=1:273386701;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	280275130	280275229	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:273671572;1allele=C/T;version=Hapmap2;RS=rs276551442;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	280296219	280296318	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:273692661;1allele=C/T;version=Hapmap2;RS=rs131894486;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	280299527	280299626	.	+	.	Name=Tassel_length;B73v2_pos=1:273695965;1allele=G/A;version=Hapmap2;RS=rs128953156;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	280302150	280302249	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:273698588;1allele=G/T;version=Hapmap1;RS=rs131894548;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	280303878	280303977	.	+	.	Name=Stalk_strength;B73v2_pos=1:273700316;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	280441711	280441810	.	+	.	Name=Tassel_length;B73v2_pos=1:273833455;1allele=C/T;version=Hapmap2;RS=rs1060839454;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	280457232	280457331	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:273849411;1allele=T/C;version=Hapmap1;RS=rs131894674;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	280457413	280457512	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:273849592;1allele=C/A;version=Hapmap2;RS=rs804678223;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	280457951	280458050	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:273850130;1allele=G/A;version=Hapmap2;RS=rs276551795;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	280458226	280458325	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:273850405;1allele=T/G;version=Hapmap2;RS=rs276551803;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	280458727	280458826	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:273850906;1allele=A/C;version=Hapmap2;RS=rs128953266;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	280506464	280506563	.	+	.	Name=Tassel_length;B73v2_pos=1:273896644;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	280507491	280507590	.	+	.	Name=Tassel_length;B73v2_pos=1:273897671;1allele=A/G;version=Hapmap2;RS=rs128953455;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	280591071	280591170	.	+	.	Name=Tassel_length;B73v2_pos=1:273984016;1allele=A/G;version=Hapmap2;RS=rs276551949;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	280591098	280591197	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:273984043;1allele=C/G;version=Hapmap2;RS=rs276551950;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	280591098	280591197	.	+	.	Name=Tassel_length;B73v2_pos=1:273984043;1allele=C/G;version=Hapmap2;RS=rs276551950;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	280591450	280591549	.	+	.	Name=Tassel_length;B73v2_pos=1:273984395;1allele=A/C;version=Hapmap2;RS=rs276551955;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	280597789	280597888	.	+	.	Name=Leaf_width;B73v2_pos=1:273990920;1allele=A/C;version=Hapmap2;RS=rs1064367066;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	280604410	280604509	.	+	.	Name=Leaf_width;B73v2_pos=1:273997541;1allele=A/C;version=Hapmap2;RS=rs1061542435;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	280611704	280611803	.	+	.	Name=Leaf_width;B73v2_pos=1:274004835;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	280613409	280613508	.	+	.	Name=Leaf_width;B73v2_pos=1:274006540;1allele=T/C;version=Hapmap2;RS=rs1061481647;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	280623170	280623269	.	+	.	Name=Leaf_width;B73v2_pos=1:274016301;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	280697359	280697458	.	+	.	Name=Height_above_ear;B73v2_pos=1:274091051;1allele=A/G;version=Hapmap2;RS=rs276552247;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	280807578	280807677	.	+	.	Name=Plant_height;B73v2_pos=1:274198308;1allele=G/A;version=Hapmap2;RS=rs276552449;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	281044304	281044403	.	+	.	Name=Leaf_width;B73v2_pos=1:274407571;1allele=G/T;version=Hapmap2;RS=rs128954191;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	281047074	281047173	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:274410341;1allele=C/G;version=Hapmap1;RS=rs131895039;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	281051941	281052040	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:274415208;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281062541	281062640	.	+	.	Name=Plant_height;B73v2_pos=1:274425806;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281102370	281102469	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:274479269;1allele=T/C;version=Hapmap2;RS=rs131895173;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	281151797	281151896	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:274527846;1allele=A/G;version=Hapmap2;RS=rs821378545;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	281352689	281352788	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:274728458;1allele=T/C;version=Hapmap2;RS=rs844743910;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	281357863	281357962	.	+	.	Name=Leaf_width;B73v2_pos=1:274733632;1allele=G/A;version=Hapmap2;RS=rs845653845;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	281371708	281371807	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:274809301;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281392809	281392908	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:274788320;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281396422	281396521	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:274784707;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281484121	281484220	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:274851552;1allele=C/G;version=Hapmap1;RS=rs128954693;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	281514434	281514533	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:274877170;1allele=A/C;version=Hapmap2;RS=rs1063363001;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	281517401	281517500	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:274880137;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281587272	281587371	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:274950007;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281616678	281616777	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:274983588;1allele=C/T;version=Hapmap2;RS=rs276553297;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	281717166	281717265	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:275084068;1allele=A/C;version=Hapmap2;RS=rs128954980;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	281780270	281780369	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:275148785;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281822024	281822123	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:275185373;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	281861211	281861310	.	+	.	Name=Leaf_width;B73v2_pos=1:275224877;1allele=A/G;version=Hapmap2;RS=rs128955066;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	281863337	281863436	.	+	.	Name=Ear_row_number;B73v2_pos=1:275227003;1allele=G/A;version=Hapmap1;RS=rs821091827;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	281879307	281879406	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275242709;1allele=A/C;version=Hapmap2;RS=rs276553836;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	281883581	281883680	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:275246985;1allele=A/G;version=Hapmap2;RS=rs1063679484;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	281936431	281936530	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275295304;1allele=C/T;version=Hapmap2;RS=rs1063777962;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	282025260	282025359	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275383002;1allele=G/A;version=Hapmap1;RS=rs131896619;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	282222418	282222517	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275586852;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282272525	282272624	.	+	.	Name=Plant_height;B73v2_pos=1:275627117;1allele=C/T;version=Hapmap2;RS=rs276554685;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	282330554	282330653	.	+	.	Name=Days_to_silk;B73v2_pos=1:275671805;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282345774	282345873	.	+	.	Name=Leaf_width;B73v2_pos=1:275687026;1allele=T/C;version=Hapmap2;RS=rs128956117;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	282379769	282379868	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275730931;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282381655	282381754	.	+	.	Name=Ear_row_number;B73v2_pos=1:275732817;1allele=G/A;version=Hapmap2;RS=rs131897030;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	282382110	282382209	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275733272;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282391661	282391760	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275707981;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282391766	282391865	.	+	.	Name=Ear_row_number;B73v2_pos=1:275707876;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282427664	282427763	.	+	.	Name=Plant_height;B73v2_pos=1:275770827;1allele=C/T;version=Hapmap1;RS=rs131897168;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	282428468	282428567	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:275771631;1allele=A/G;version=Hapmap1;RS=rs131897195;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	282430488	282430587	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:275773651;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282430817	282430916	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:275773980;1allele=A/G;version=Hapmap1;RS=rs131897245;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	282503423	282503522	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:275828799;1allele=C/T;version=Hapmap2;RS=rs725494405;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	282504566	282504665	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:275829942;1allele=C/T;version=Hapmap2;RS=rs1064134646;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	282505052	282505151	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:275830428;1allele=C/A;version=Hapmap1;RS=rs131897354;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	282505605	282505704	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:275830981;1allele=A/G;version=Hapmap2;RS=rs128956364;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	282508231	282508330	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:275833607;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282508264	282508363	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:275833640;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282511130	282511229	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:275836506;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282542277	282542376	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:275867655;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282548624	282548723	.	+	.	Name=Leaf_width;B73v2_pos=1:275873932;1allele=A/G;version=Hapmap2;RS=rs1063285738;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	282568469	282568568	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:275910805;1allele=A/G;version=Hapmap2;RS=rs1060776824;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	282581802	282581901	.	+	.	Name=Leaf_width;B73v2_pos=1:275924141;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282631163	282631262	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:275974343;1allele=C/A;version=Hapmap1;RS=rs131897377;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	282727475	282727574	.	+	.	Name=Ear_row_number;B73v2_pos=1:276070379;1allele=C/T;version=Hapmap2;RS=rs1060810333;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	282740730	282740829	.	+	.	Name=Tassel_length;B73v2_pos=1:276083634;1allele=A/C;version=Hapmap2;RS=rs276555407;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	282768087	282768186	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:276113891;1allele=A/C;version=Hapmap2;RS=rs128956557;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	282852378	282852477	.	+	.	Name=Ear_row_number;B73v2_pos=1:276198182;1allele=G/A;version=Hapmap2;RS=rs1062054951;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	282864443	282864542	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:276210247;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282873547	282873646	.	+	.	Name=Plant_height;B73v2_pos=1:276219351;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282874172	282874271	.	+	.	Name=Plant_height;B73v2_pos=1:276219976;1allele=A/T;version=Hapmap2;RS=rs1062953256;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	282902556	282902655	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:276248360;1allele=A/T;version=Hapmap2;RS=rs1064437042;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	282940792	282940891	.	+	.	Name=Leaf_width;B73v2_pos=1:276286596;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282957335	282957434	.	+	.	Name=Ear_height;B73v2_pos=1:276303139;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	282958963	282959062	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:276304767;1allele=A/C;version=Hapmap2;RS=rs725067077;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	282962776	282962875	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:276308580;1allele=C/T;version=Hapmap2;RS=rs276555878;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	282963449	282963548	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:276309253;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	283020314	283020413	.	+	.	Name=Stalk_strength;B73v2_pos=1:276366118;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	283069583	283069682	.	+	.	Name=Ear_row_number;B73v2_pos=1:276416228;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	283181970	283182069	.	+	.	Name=Ear_row_number;B73v2_pos=1:276525223;1allele=G/A;version=Hapmap2;RS=rs1064759094;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	283184567	283184666	.	+	.	Name=Ear_row_number;B73v2_pos=1:276527820;1allele=C/T;version=Hapmap1;RS=rs131898115;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	283224728	283224827	.	+	.	Name=Ear_row_number;B73v2_pos=1:276585232;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	283335269	283335368	.	+	.	Name=Ear_row_number;B73v2_pos=1:276682114;1allele=C/T;version=Hapmap2;RS=rs276556587;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	283339482	283339581	.	+	.	Name=Ear_row_number;B73v2_pos=1:276686327;1allele=C/A;version=Hapmap2;RS=rs128957410;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	283342995	283343094	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:276689840;1allele=C/T;version=Hapmap2;RS=rs810041874;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	283353627	283353726	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:276700471;1allele=A/G;version=Hapmap2;RS=rs276556719;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	283356911	283357010	.	+	.	Name=Leaf_width;B73v2_pos=1:276703755;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	283368348	283368447	.	+	.	Name=Leaf_width;B73v2_pos=1:276715283;1allele=G/A;version=Hapmap2;RS=rs1060748204;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	283370115	283370214	.	+	.	Name=Ear_row_number;B73v2_pos=1:276717050;1allele=G/A;version=Hapmap2;RS=rs1063634128;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	283449789	283449888	.	+	.	Name=Leaf_width;B73v2_pos=1:276793705;1allele=G/A;version=Hapmap2;RS=rs1063646507;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	283475616	283475715	.	+	.	Name=Ear_row_number;B73v2_pos=1:276817978;1allele=A/G;version=Hapmap1;RS=rs131898411;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	283476399	283476498	.	+	.	Name=Leaf_width;B73v2_pos=1:276818761;1allele=T/A;version=Hapmap2;RS=rs812583768;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	283517701	283517800	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:276860870;1allele=T/C;version=Hapmap2;RS=rs276556915;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	283518016	283518115	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:276861185;1allele=T/G;version=Hapmap2;RS=rs1061299043;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	283518016	283518115	.	+	.	Name=Plant_height;B73v2_pos=1:276861185;1allele=T/G;version=Hapmap2;RS=rs1061299043;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	283518170	283518269	.	+	.	Name=Height_above_ear;B73v2_pos=1:276861339;1allele=T/C;version=Hapmap2;RS=rs276556921;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	283518883	283518982	.	+	.	Name=Plant_height;B73v2_pos=1:276862052;1allele=G/A;version=Hapmap2;RS=rs131898499;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	283518883	283518982	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:276862052;1allele=G/A;version=Hapmap2;RS=rs131898499;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	283677001	283677100	.	+	.	Name=Height_above_ear;B73v2_pos=1:276977521;1allele=T/C;version=Hapmap2;RS=rs840880921;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	283678155	283678254	.	+	.	Name=Plant_height;B73v2_pos=1:276978625;1allele=A/T;version=Hapmap2;RS=rs276557000;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	283678837	283678936	.	+	.	Name=Height_above_ear;B73v2_pos=1:276979307;1allele=G/C;version=Hapmap2;RS=rs835017258;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	283681222	283681321	.	+	.	Name=Tassel_length;B73v2_pos=1:276981692;1allele=A/G;version=Hapmap2;RS=rs276557013;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	283902054	283902153	.	+	.	Name=Leaf_width;B73v2_pos=1:277205423;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284020129	284020228	.	+	.	Name=Leaf_width;B73v2_pos=1:277314024;1allele=C/T;version=Hapmap2;RS=rs276557378;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	284021224	284021323	.	+	.	Name=Leaf_width;B73v2_pos=1:277315119;1allele=G/A;version=Hapmap2;RS=rs276557390;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284021593	284021692	.	+	.	Name=Leaf_width;B73v2_pos=1:277315488;1allele=T/C;version=Hapmap2;RS=rs276557396;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	284022773	284022872	.	+	.	Name=Leaf_width;B73v2_pos=1:277316668;1allele=T/C;version=Hapmap2;RS=rs276557408;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	284023003	284023102	.	+	.	Name=Leaf_width;B73v2_pos=1:277316898;1allele=T/G;version=Hapmap2;RS=rs276557410;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	284023679	284023778	.	+	.	Name=Leaf_width;B73v2_pos=1:277317574;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284108631	284108730	.	+	.	Name=Stalk_strength;B73v2_pos=1:277379206;1allele=T/C;version=Hapmap2;RS=rs850159725;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	284113600	284113699	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:277384177;1allele=G/T;version=Hapmap2;RS=rs814766288;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	284113914	284114013	.	+	.	Name=Leaf_width;B73v2_pos=1:277384491;1allele=C/T;version=Hapmap2;RS=rs820199669;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	284224888	284224987	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:277504370;1allele=G/A;version=Hapmap2;RS=rs276557840;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284338257	284338356	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:277619382;1allele=C/G;version=Hapmap2;RS=rs276558189;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	284363146	284363245	.	+	.	Name=Leaf_width;B73v2_pos=1:277637686;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284374628	284374727	.	+	.	Name=Leaf_width;B73v2_pos=1:277647752;1allele=T/C;version=Hapmap2;RS=rs1063589862;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	284400702	284400801	.	+	.	Name=Ear_row_number;B73v2_pos=1:277697616;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284564907	284565006	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:277843871;1allele=A/G;version=Hapmap1;RS=rs131899161;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	284567085	284567184	.	+	.	Name=Tassel_length;B73v2_pos=1:277846049;1allele=T/C;version=Hapmap1;RS=rs131899227;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	284567285	284567384	.	+	.	Name=Tassel_length;B73v2_pos=1:277846249;1allele=G/A;version=Hapmap1;RS=rs131899231;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284567495	284567594	.	+	.	Name=Tassel_length;B73v2_pos=1:277846459;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284567708	284567807	.	+	.	Name=Tassel_length;B73v2_pos=1:277846672;1allele=A/C;version=Hapmap1;RS=rs128959027;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	284594081	284594180	.	+	.	Name=Leaf_width;B73v2_pos=1:277873047;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284638100	284638199	.	+	.	Name=Leaf_width;B73v2_pos=1:277917082;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284639318	284639417	.	+	.	Name=Leaf_width;B73v2_pos=1:277918300;1allele=T/A;version=Hapmap2;RS=rs1063936152;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	284657615	284657714	.	+	.	Name=Height_above_ear;B73v2_pos=1:277936598;1allele=A/G;version=Hapmap1;RS=rs131899297;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	284659450	284659549	.	+	.	Name=Days_to_silk;B73v2_pos=1:277938433;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284659890	284659989	.	+	.	Name=Leaf_length;B73v2_pos=1:277938873;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284753720	284753819	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:278022181;1allele=T/C;version=Hapmap2;RS=rs276558640;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	284754378	284754477	.	+	.	Name=Days_to_silk;B73v2_pos=1:278022839;1allele=G/A;version=Hapmap1;RS=rs724804726;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284765335	284765434	.	+	.	Name=Ear_row_number;B73v2_pos=1:278033796;1allele=C/T;version=Hapmap2;RS=rs131899345;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	284771259	284771358	.	+	.	Name=Ear_row_number;B73v2_pos=1:278038918;1allele=T/G;version=Hapmap2;RS=rs276558698;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	284773797	284773896	.	+	.	Name=Ear_row_number;B73v2_pos=1:278041456;1allele=A/G;version=Hapmap2;RS=rs131899401;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284774574	284774673	.	+	.	Name=Ear_row_number;B73v2_pos=1:278042233;1allele=A/T;version=Hapmap2;RS=rs128959259;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	284774686	284774785	.	+	.	Name=Height_above_ear;B73v2_pos=1:278042345;1allele=A/T;version=Hapmap2;RS=rs128959260;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	284779545	284779644	.	+	.	Name=Leaf_width;B73v2_pos=1:278047204;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284785027	284785126	.	+	.	Name=Plant_height;B73v2_pos=1:278052686;1allele=G/A;version=Hapmap2;RS=rs276558775;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284785027	284785126	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:278052686;1allele=G/A;version=Hapmap2;RS=rs276558775;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284792158	284792257	.	+	.	Name=Plant_height;B73v2_pos=1:278059817;1allele=G/A;version=Hapmap2;RS=rs276558785;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284824248	284824347	.	+	.	Name=Height_above_ear;B73v2_pos=1:278093339;1allele=G/A;version=Hapmap1;RS=rs131899663;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284824248	284824347	.	+	.	Name=Plant_height;B73v2_pos=1:278093339;1allele=G/A;version=Hapmap1;RS=rs131899663;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284824248	284824347	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:278093339;1allele=G/A;version=Hapmap1;RS=rs131899663;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	284824367	284824466	.	+	.	Name=Height_above_ear;B73v2_pos=1:278093458;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284864524	284864623	.	+	.	Name=Plant_height;B73v2_pos=1:278132560;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284864598	284864697	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:278132634;1allele=C/T;version=Hapmap2;RS=rs128959397;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	284864617	284864716	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:278132653;1allele=T/A;version=Hapmap2;RS=rs128959396;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	284864617	284864716	.	+	.	Name=Plant_height;B73v2_pos=1:278132653;1allele=T/A;version=Hapmap2;RS=rs128959396;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	284867487	284867586	.	+	.	Name=Plant_height;B73v2_pos=1:278135523;1allele=T/C;version=Hapmap2;RS=rs128959365;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	284891417	284891516	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:278160386;1allele=/ATTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284895997	284896096	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278164966;1allele=A/G;version=Hapmap1;RS=rs131899624;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	284895997	284896096	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:278164966;1allele=A/G;version=Hapmap1;RS=rs131899624;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	284896527	284896626	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278165496;1allele=T/C;version=Hapmap2;RS=rs131899632;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	284896726	284896825	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278165695;1allele=/TCTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	284915544	284915643	.	+	.	Name=Leaf_width;B73v2_pos=1:278179138;1allele=C/T;version=Hapmap2;RS=rs128959506;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	284933714	284933813	.	+	.	Name=Ear_row_number;B73v2_pos=1:278197309;1allele=C/A;version=Hapmap2;RS=rs1064330098;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	284996213	284996312	.	+	.	Name=Ear_row_number;B73v2_pos=1:278259809;1allele=C/T;version=Hapmap2;RS=rs1063042738;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	285087734	285087833	.	+	.	Name=Leaf_width;B73v2_pos=1:278351332;1allele=G/T;version=Hapmap2;RS=rs128959634;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	285096017	285096116	.	+	.	Name=Leaf_width;B73v2_pos=1:278359615;1allele=G/A;version=Hapmap2;RS=rs276559188;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	285108850	285108949	.	+	.	Name=Leaf_width;B73v2_pos=1:278372447;1allele=C/A;version=Hapmap2;RS=rs276559191;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	285109670	285109769	.	+	.	Name=Leaf_width;B73v2_pos=1:278373267;1allele=A/G;version=Hapmap1;RS=rs830123965;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	285110530	285110629	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278374127;1allele=C/T;version=Hapmap1;RS=rs131899882;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285144748	285144847	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:278447470;1allele=T/A;version=Hapmap2;RS=rs276559230;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	285251161	285251260	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:278510301;1allele=G/T;version=Hapmap2;RS=rs128959789;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	285251952	285252051	.	+	.	Name=Ear_row_number;B73v2_pos=1:278511092;1allele=G/A;version=Hapmap2;RS=rs128959791;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	285255573	285255672	.	+	.	Name=Ear_row_number;B73v2_pos=1:278514713;1allele=C/T;version=Hapmap2;RS=rs128959800;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	285259278	285259377	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:278518418;1allele=T/C;version=Hapmap2;RS=rs276559330;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285294389	285294488	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:278553531;1allele=A/G;version=Hapmap2;RS=rs1063008715;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	285294389	285294488	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:278553531;1allele=A/G;version=Hapmap2;RS=rs1063008715;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	285338816	285338915	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278605273;1allele=T/C;version=Hapmap2;RS=rs131900231;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285338816	285338915	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:278605273;1allele=T/C;version=Hapmap2;RS=rs131900231;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285339191	285339290	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278605648;1allele=G/C;version=Hapmap2;RS=rs276559497;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	285339191	285339290	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:278605648;1allele=G/C;version=Hapmap2;RS=rs276559497;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	285341360	285341459	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:278607817;1allele=G/C;version=Hapmap1;RS=rs131900287;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	285341360	285341459	.	+	.	Name=Plant_height;B73v2_pos=1:278607817;1allele=G/C;version=Hapmap1;RS=rs131900287;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	285341360	285341459	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278607817;1allele=G/C;version=Hapmap1;RS=rs131900287;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	285341389	285341488	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278607846;1allele=G/A;version=Hapmap1;RS=rs131900288;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	285341464	285341563	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278607921;1allele=C/-;version=Hapmap1;RS=rs131900299;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285341464	285341563	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:278607921;1allele=C/-;version=Hapmap1;RS=rs131900299;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285341464	285341563	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:278607921;1allele=C/-;version=Hapmap1;RS=rs131900299;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285341656	285341755	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278608113;1allele=C/G;version=Hapmap2;RS=rs128960007;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	285355620	285355719	.	+	.	Name=Height_above_ear;B73v2_pos=1:278621355;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	285451837	285451936	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:278711625;1allele=C/A;version=Hapmap2;RS=rs128960195;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	285453824	285453923	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:278713612;1allele=G/C;version=Hapmap2;RS=rs869433906;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	285476149	285476248	.	+	.	Name=Ear_row_number;B73v2_pos=1:278733070;1allele=T/A;version=Hapmap2;RS=rs276559771;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	285509045	285509144	.	+	.	Name=Ear_row_number;B73v2_pos=1:278765965;1allele=C/T;version=Hapmap2;RS=rs1064277001;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	285510783	285510882	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:278767703;1allele=G/A;version=Hapmap2;RS=rs1063102345;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	285537983	285538082	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:278794904;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	285607430	285607529	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278863709;1allele=C/T;version=Hapmap1;RS=rs131900497;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285627940	285628039	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:278884220;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	285643489	285643588	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:278898753;1allele=C/T;version=Hapmap2;RS=rs725187485;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285647785	285647884	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278903049;1allele=A/C;version=Hapmap2;RS=rs128960638;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	285647846	285647945	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:278903110;1allele=G/C;version=Hapmap2;RS=rs276560052;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	285758646	285758745	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:279010762;1allele=C/T;version=Hapmap2;RS=rs1064295546;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	285786923	285787022	.	+	.	Name=Ear_row_number;B73v2_pos=1:279039047;1allele=G/A;version=Hapmap2;RS=rs1063393655;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	285822275	285822374	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:279074399;1allele=C/T;version=Hapmap2;RS=rs1061623639;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285862316	285862415	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:279118201;1allele=G/A;version=Hapmap2;RS=rs131182346;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	285879835	285879934	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:279135721;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	285902039	285902138	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:279157567;1allele=T/C;version=Hapmap2;RS=rs276560534;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	285930160	285930259	.	+	.	Name=Leaf_width;B73v2_pos=1:279186226;1allele=G/A;version=Hapmap1;RS=rs276560559;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286029733	286029832	.	+	.	Name=Height_above_ear;B73v2_pos=1:279279742;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286029733	286029832	.	+	.	Name=Plant_height;B73v2_pos=1:279279742;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286047207	286047306	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279295590;1allele=T/C;version=Hapmap1;RS=rs131901125;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	286055487	286055586	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279303870;1allele=G/T;version=Hapmap1;RS=rs131901137;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	286089949	286090048	.	+	.	Name=Height_above_ear;B73v2_pos=1:279371242;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286098108	286098207	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:279363082;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286135369	286135468	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:279378026;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286200102	286200201	.	+	.	Name=Height_above_ear;B73v2_pos=1:279385529;1allele=G/A;version=Hapmap2;RS=rs128961554;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286238673	286238772	.	+	.	Name=Tassel_length;B73v2_pos=1:279424101;1allele=G/A;version=Hapmap2;RS=rs128961802;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	286289380	286289479	.	+	.	Name=Tassel_length;B73v2_pos=1:279474816;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286337372	286337471	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279522809;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286355264	286355363	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:279540701;1allele=C/T;version=Hapmap2;RS=rs1063178163;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	286371167	286371266	.	+	.	Name=Height_above_ear;B73v2_pos=1:279556604;1allele=/AT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286374590	286374689	.	+	.	Name=Plant_height;B73v2_pos=1:279560027;1allele=/AATA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286374805	286374904	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279560242;1allele=G/T;version=Hapmap2;RS=rs837838419;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	286375014	286375113	.	+	.	Name=Leaf_width;B73v2_pos=1:279560451;1allele=G/A;version=Hapmap1;RS=rs276561446;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286375904	286376003	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:279561341;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286378539	286378638	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:279563976;1allele=C/G;version=Hapmap1;RS=rs131901340;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	286381496	286381595	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:279566933;1allele=G/C;version=Hapmap1;RS=rs128961966;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	286383798	286383897	.	+	.	Name=Leaf_width;B73v2_pos=1:279569235;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286397537	286397636	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:279582971;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286399216	286399315	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279584650;1allele=/GAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286399504	286399603	.	+	.	Name=Leaf_width;B73v2_pos=1:279584938;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286405230	286405329	.	+	.	Name=Plant_height;B73v2_pos=1:279590665;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286405235	286405334	.	+	.	Name=Plant_height;B73v2_pos=1:279590670;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286405479	286405578	.	+	.	Name=Stalk_strength;B73v2_pos=1:279590914;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286437808	286437907	.	+	.	Name=Plant_height;B73v2_pos=1:279620247;1allele=C/A;version=Hapmap2;RS=rs128962070;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	286438423	286438522	.	+	.	Name=Leaf_length;B73v2_pos=1:279620862;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286438665	286438764	.	+	.	Name=Height_above_ear;B73v2_pos=1:279621104;1allele=A/C;version=Hapmap2;RS=rs128962072;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	286438665	286438764	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:279621104;1allele=A/C;version=Hapmap2;RS=rs128962072;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	286438665	286438764	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:279621104;1allele=A/C;version=Hapmap2;RS=rs128962072;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	286438665	286438764	.	+	.	Name=Plant_height;B73v2_pos=1:279621104;1allele=A/C;version=Hapmap2;RS=rs128962072;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	286439073	286439172	.	+	.	Name=Leaf_length;B73v2_pos=1:279621512;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286439095	286439194	.	+	.	Name=Tassel_length;B73v2_pos=1:279621534;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286439095	286439194	.	+	.	Name=Leaf_length;B73v2_pos=1:279621534;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286439098	286439197	.	+	.	Name=Tassel_length;B73v2_pos=1:279621537;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286439160	286439259	.	+	.	Name=Plant_height;B73v2_pos=1:279621599;1allele=A/T;version=Hapmap2;RS=rs276561622;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	286439160	286439259	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279621599;1allele=A/T;version=Hapmap2;RS=rs276561622;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	286442403	286442502	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:279624842;1allele=C/A;version=Hapmap2;RS=rs128962083;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	286442532	286442631	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:279624971;1allele=G/A;version=Hapmap2;RS=rs128962085;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	286442532	286442631	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279624971;1allele=G/A;version=Hapmap2;RS=rs128962085;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	286443791	286443890	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:279626230;1allele=C/A;version=Hapmap2;RS=rs128962090;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	286448436	286448535	.	+	.	Name=Stalk_strength;B73v2_pos=1:279630875;1allele=G/A;version=Hapmap1;RS=rs131901647;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286546500	286546599	.	+	.	Name=Cob_diameter;B73v2_pos=1:279760792;1allele=A/G;version=Hapmap2;RS=rs820866623;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	286546522	286546621	.	+	.	Name=Cob_diameter;B73v2_pos=1:279760770;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286554635	286554734	.	+	.	Name=Cob_diameter;B73v2_pos=1:279681558;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286627497	286627596	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279821100;1allele=C/T;version=Hapmap2;RS=rs1063215364;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	286628860	286628959	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279822463;1allele=C/T;version=Hapmap2;RS=rs276561996;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	286633808	286633907	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:279827411;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286641343	286641442	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:279834946;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286645645	286645744	.	+	.	Name=Plant_height;B73v2_pos=1:279763042;1allele=A/G;version=Hapmap2;RS=rs276561895;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286646085	286646184	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:279763482;1allele=C/T;version=Hapmap1;RS=rs131901796;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	286648497	286648596	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279765894;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286654856	286654955	.	+	.	Name=Days_to_silk;B73v2_pos=1:279772255;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286654856	286654955	.	+	.	Name=Leaf_length;B73v2_pos=1:279772255;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286654918	286655017	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279772317;1allele=G/C;version=Hapmap1;RS=rs131901862;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	286655593	286655692	.	+	.	Name=Height_above_ear;B73v2_pos=1:279772992;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286656191	286656290	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279773590;1allele=G/A;version=Hapmap1;RS=rs128962417;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286658004	286658103	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:279775403;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286658190	286658289	.	+	.	Name=Cob_diameter;B73v2_pos=1:279775589;1allele=T/G;version=Hapmap2;RS=rs1061218487;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	286662379	286662478	.	+	.	Name=Height_above_ear;B73v2_pos=1:279779779;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286662644	286662743	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:279780044;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286662658	286662757	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:279780058;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286662880	286662979	.	+	.	Name=Height_above_ear;B73v2_pos=1:279780280;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286663755	286663854	.	+	.	Name=Cob_diameter;B73v2_pos=1:279781155;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286674021	286674120	.	+	.	Name=Height_above_ear;B73v2_pos=1:279874815;1allele=A/G;version=Hapmap2;RS=rs726159637;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	286674112	286674211	.	+	.	Name=Height_above_ear;B73v2_pos=1:279874906;1allele=A/G;version=Hapmap2;RS=rs128962535;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	286674157	286674256	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:279874951;1allele=T/C;version=Hapmap2;RS=rs128962536;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	286675797	286675896	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:279876592;1allele=G/T;version=Hapmap2;RS=rs128962565;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	286677960	286678059	.	+	.	Name=Height_above_ear;B73v2_pos=1:279878755;1allele=T/A;version=Hapmap2;RS=rs276562098;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	286678214	286678313	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:279879009;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286694856	286694955	.	+	.	Name=Tassel_length;B73v2_pos=1:279896404;1allele=A/G;version=Hapmap2;RS=rs128962652;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	286695031	286695130	.	+	.	Name=Ear_row_number;B73v2_pos=1:279896579;1allele=G/A;version=Hapmap2;RS=rs276562181;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	286709079	286709178	.	+	.	Name=Tassel_length;B73v2_pos=1:279910628;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286760493	286760592	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:279960724;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286789333	286789432	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:279988587;1allele=G/A;version=Hapmap2;RS=rs1061621190;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286803304	286803403	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:280002642;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286803651	286803750	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:280002989;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286879421	286879520	.	+	.	Name=Stalk_strength;B73v2_pos=1:280073832;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286940032	286940131	.	+	.	Name=Height_above_ear;B73v2_pos=1:280135508;1allele=C/T;version=Hapmap2;RS=rs1062356002;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	286950020	286950119	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:280145495;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286952070	286952169	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280147545;1allele=G/A;version=Hapmap2;RS=rs1061709684;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286956025	286956124	.	+	.	Name=Plant_height;B73v2_pos=1:280151500;1allele=G/A;version=Hapmap2;RS=rs1064792192;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	286962970	286963069	.	+	.	Name=Plant_height;B73v2_pos=1:280158445;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286962970	286963069	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280158445;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	286985696	286985795	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:280181183;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287007134	287007233	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:280202620;1allele=A/T;version=Hapmap2;RS=rs812412174;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	287013815	287013914	.	+	.	Name=Plant_height;B73v2_pos=1:280209301;1allele=/TGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287014097	287014196	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:280209583;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287014779	287014878	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280210265;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287019916	287020015	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:280215396;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287023577	287023676	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:280219058;1allele=G/T;version=Hapmap2;RS=rs822790902;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	287023596	287023695	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:280219077;1allele=C/G;version=Hapmap1;RS=rs131902524;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	287023871	287023970	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280219352;1allele=G/C;version=Hapmap2;RS=rs128963251;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	287030084	287030183	.	+	.	Name=Leaf_width;B73v2_pos=1:280225565;1allele=T/C;version=Hapmap2;RS=rs276562733;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287030583	287030682	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280226064;1allele=C/T;version=Hapmap2;RS=rs276562747;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	287060886	287060985	.	+	.	Name=Leaf_width;B73v2_pos=1:280253833;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287061581	287061680	.	+	.	Name=Leaf_width;B73v2_pos=1:280254528;1allele=C/T;version=Hapmap2;RS=rs276562780;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	287061883	287061982	.	+	.	Name=Leaf_width;B73v2_pos=1:280254830;1allele=C/T;version=Hapmap2;RS=rs276562792;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	287064425	287064524	.	+	.	Name=Leaf_width;B73v2_pos=1:280257372;1allele=G/T;version=Hapmap2;RS=rs1062584625;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	287064433	287064532	.	+	.	Name=Leaf_width;B73v2_pos=1:280257380;1allele=G/A;version=Hapmap2;RS=rs1063161789;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287091628	287091727	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:280284883;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287101932	287102031	.	+	.	Name=Leaf_width;B73v2_pos=1:280287126;1allele=C/T;version=Hapmap2;RS=rs131902568;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	287102967	287103066	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280288161;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287133416	287133515	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:280318798;1allele=G/A;version=Hapmap1;RS=rs131902583;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287156497	287156596	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280341879;1allele=C/G;version=Hapmap2;RS=rs128963346;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	287156540	287156639	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280341922;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287156843	287156942	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:280342225;1allele=G/A;version=Hapmap2;RS=rs276563233;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287156843	287156942	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280342225;1allele=G/A;version=Hapmap2;RS=rs276563233;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287157143	287157242	.	+	.	Name=Ear_row_number;B73v2_pos=1:280342525;1allele=/TC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287161168	287161267	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:280346550;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287172926	287173025	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280378293;1allele=C/T;version=Hapmap1;RS=rs128963419;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287172926	287173025	.	+	.	Name=Plant_height;B73v2_pos=1:280378293;1allele=C/T;version=Hapmap1;RS=rs128963419;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287173649	287173748	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280379016;1allele=GCA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287173981	287174080	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280379348;1allele=T/C;version=Hapmap1;RS=rs128963418;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287174571	287174670	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280379929;1allele=T/C;version=Hapmap2;RS=rs131902729;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287175582	287175681	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280380936;1allele=/ATTTTT;version=Hapmap1;RS=rs131902712;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287175582	287175681	.	+	.	Name=Plant_height;B73v2_pos=1:280380936;1allele=/ATTTTT;version=Hapmap1;RS=rs131902712;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287175582	287175681	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:280380936;1allele=/ATTTTT;version=Hapmap1;RS=rs131902712;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287178016	287178115	.	+	.	Name=Tassel_length;B73v2_pos=1:280383370;1allele=T/C;version=Hapmap2;RS=rs1061873393;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	287187600	287187699	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280392959;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287187600	287187699	.	+	.	Name=Height_above_ear;B73v2_pos=1:280392959;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287212612	287212711	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:280407711;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287238387	287238486	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:280433485;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287240534	287240633	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280435632;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287261630	287261729	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:280456741;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287267955	287268052	.	+	.	Name=Tassel_length;B73v2_pos=1:280463073;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287269362	287269461	.	+	.	Name=Tassel_length;B73v2_pos=1:280464482;1allele=T/A;version=Hapmap2;RS=rs1064404451;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	287281433	287281532	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:280473396;1allele=G/A;version=Hapmap2;RS=rs128963493;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287286155	287286254	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:280478118;1allele=T/G;version=Hapmap2;RS=rs1064089122;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	287286155	287286254	.	+	.	Name=Leaf_length;B73v2_pos=1:280478118;1allele=T/G;version=Hapmap2;RS=rs1064089122;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	287286219	287286318	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280478182;1allele=G/A;version=Hapmap2;RS=rs1062268372;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287288058	287288157	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280509858;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287308232	287308331	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:280483493;1allele=A/G;version=Hapmap2;RS=rs1061689429;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287309353	287309452	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280484614;1allele=C/A;version=Hapmap2;RS=rs1062728749;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	287309740	287309839	.	+	.	Name=Tassel_length;B73v2_pos=1:280485001;1allele=C/T;version=Hapmap2;RS=rs276563365;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287309956	287310055	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:280485217;1allele=G/A;version=Hapmap2;RS=rs1060735984;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287310687	287310786	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280485948;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287326008	287326107	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280561287;1allele=A/T;version=Hapmap2;RS=rs128963637;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	287335088	287335187	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:280499986;1allele=A/G;version=Hapmap2;RS=rs1064451807;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287336703	287336802	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:280501601;1allele=G/A;version=Hapmap2;RS=rs1061422881;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287396461	287396560	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:280582804;1allele=C/A;version=Hapmap2;RS=rs131902904;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287397814	287397913	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:280584157;1allele=T/C;version=Hapmap2;RS=rs128963786;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287398158	287398257	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:280584501;1allele=A/G;version=Hapmap2;RS=rs276563542;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287426006	287426105	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280633043;1allele=G/T;version=Hapmap2;RS=rs1062056441;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	287427514	287427613	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280634551;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287478688	287478787	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:280685727;1allele=G/T;version=Hapmap2;RS=rs128963901;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	287499444	287499543	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:280706482;1allele=G/C;version=Hapmap2;RS=rs276563717;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	287499444	287499543	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280706482;1allele=G/C;version=Hapmap2;RS=rs276563717;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	287504693	287504792	.	+	.	Name=Leaf_length;B73v2_pos=1:280711731;1allele=T/G;version=Hapmap2;RS=rs827825441;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	287507309	287507408	.	+	.	Name=Tassel_length;B73v2_pos=1:280714345;1allele=G/A;version=Hapmap1;RS=rs131903032;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	287557107	287557206	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280774902;1allele=A/G;version=Hapmap2;RS=rs276563830;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	287557581	287557680	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:280775376;1allele=T/C;version=Hapmap2;RS=rs276563833;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	287557694	287557793	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280775489;1allele=C/T;version=Hapmap2;RS=rs128964135;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	287558759	287558858	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280776554;1allele=G/A;version=Hapmap2;RS=rs131903333;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287559081	287559180	.	+	.	Name=Plant_height;B73v2_pos=1:280776876;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287559521	287559620	.	+	.	Name=Height_above_ear;B73v2_pos=1:280777316;1allele=G/A;version=Hapmap1;RS=rs131903316;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287560889	287560988	.	+	.	Name=Plant_height;B73v2_pos=1:280778684;1allele=C/T;version=Hapmap2;RS=rs823600551;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287560889	287560988	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:280778684;1allele=C/T;version=Hapmap2;RS=rs823600551;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287560889	287560988	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280778684;1allele=C/T;version=Hapmap2;RS=rs823600551;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287619428	287619527	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:280826507;1allele=G/T;version=Hapmap1;RS=rs131903221;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	287624384	287624483	.	+	.	Name=Height_above_ear;B73v2_pos=1:280831463;1allele=C/T;version=Hapmap2;RS=rs1064352378;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287624384	287624483	.	+	.	Name=Plant_height;B73v2_pos=1:280831463;1allele=C/T;version=Hapmap2;RS=rs1064352378;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287624384	287624483	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:280831463;1allele=C/T;version=Hapmap2;RS=rs1064352378;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	287624917	287625016	.	+	.	Name=Plant_height;B73v2_pos=1:280831996;1allele=A/G;version=Hapmap2;RS=rs276563887;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287703366	287703465	.	+	.	Name=Leaf_length;B73v2_pos=1:280911229;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287766984	287767083	.	+	.	Name=Leaf_length;B73v2_pos=1:280976252;1allele=A/G;version=Hapmap2;RS=rs835502727;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287813898	287813997	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:281023171;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287814933	287815032	.	+	.	Name=Stalk_strength;B73v2_pos=1:281024206;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287856360	287856459	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:281067084;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287861956	287862055	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281072679;1allele=C/G;version=Hapmap2;RS=rs276564070;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	287863930	287864029	.	+	.	Name=Leaf_width;B73v2_pos=1:281074653;1allele=G/C;version=Hapmap1;RS=rs131903676;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	287890540	287890639	.	+	.	Name=Plant_height;B73v2_pos=1:281101267;1allele=A/T;version=Hapmap1;RS=rs131903725;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	287890990	287891089	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:281101717;1allele=A/T;version=Hapmap2;RS=rs131903739;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287895587	287895686	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281106305;1allele=G/A;version=Hapmap2;RS=rs128964395;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	287955874	287955973	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:281167087;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287955952	287956051	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:281167165;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	287957741	287957840	.	+	.	Name=Leaf_length;B73v2_pos=1:281168954;1allele=G/T;version=Hapmap1;RS=rs131903988;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	287996661	287996760	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:281205474;1allele=C/T;version=Hapmap2;RS=rs128964468;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	288039853	288039952	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:281275217;1allele=A/G;version=Hapmap2;RS=rs1064229040;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	288104228	288104327	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281325208;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288159685	288159784	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:281385460;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288320712	288320811	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281523784;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288321714	288321813	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:281524786;1allele=G/A;version=Hapmap1;RS=rs276564509;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	288323519	288323618	.	+	.	Name=Glucose;B73v2_pos=1:281526591;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288324440	288324539	.	+	.	Name=Tassel_length;B73v2_pos=1:281527512;1allele=G/A;version=Hapmap2;RS=rs276564538;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	288324959	288325058	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:281528031;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288324961	288325060	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:281528033;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288324995	288325094	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:281528067;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288324997	288325096	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:281528069;1allele=T/C;version=Hapmap2;RS=rs276564547;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	288327348	288327447	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:281530420;1allele=A/C;version=Hapmap2;RS=rs128964865;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	288329320	288329419	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:281532392;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288372628	288372727	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:281592279;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288374716	288374815	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281594367;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288374728	288374827	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281594379;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288374815	288374914	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281594466;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288374834	288374933	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281594485;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288375043	288375142	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281594694;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288375043	288375142	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281594694;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288375230	288375329	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281594881;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288375348	288375447	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281594999;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288375350	288375449	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281595001;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288375664	288375763	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281595315;1allele=T/C;version=Hapmap2;RS=rs128964942;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	288384988	288385087	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281612630;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288385007	288385106	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:281612649;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288385107	288385207	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:281612749;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288390652	288390751	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281604486;1allele=T/C;version=Hapmap2;RS=rs818565724;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	288392705	288392804	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:281606539;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288393105	288393204	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281606939;1allele=G/A;version=Hapmap2;RS=rs836444388;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	288394419	288394518	.	+	.	Name=Tassel_length;B73v2_pos=1:281608253;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288394900	288394999	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:281617339;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288407868	288407967	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:281626390;1allele=G/A;version=Hapmap2;RS=rs727430333;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	288408240	288408339	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:281626762;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288414022	288414121	.	+	.	Name=Tassel_length;B73v2_pos=1:281632544;1allele=G/C;version=Hapmap1;RS=rs128964976;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	288427117	288427216	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:281645644;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288428112	288428211	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281646639;1allele=A/G;version=Hapmap2;RS=rs724345991;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	288433516	288433615	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:281652043;1allele=C/T;version=Hapmap1;RS=rs131904584;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	288443162	288443261	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281661689;1allele=A/T;version=Hapmap1;RS=rs131904611;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	288445079	288445178	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:281663606;1allele=G/A;version=Hapmap2;RS=rs838294058;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	288455838	288455937	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281691230;1allele=C/T;version=Hapmap2;RS=rs835766107;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	288455999	288456098	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:281691391;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288482544	288482643	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281705510;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288512509	288512608	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281712851;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288513937	288514036	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281714279;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288513946	288514045	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281714288;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288538292	288538391	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281759246;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288538292	288538391	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281759246;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288539172	288539271	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281760126;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288540258	288540357	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:281761212;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288540896	288540995	.	+	.	Name=Days_to_silk;B73v2_pos=1:281761850;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288582376	288582475	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281825665;1allele=A/G;version=Hapmap2;RS=rs276564926;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	288582388	288582487	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281825677;1allele=T/A;version=Hapmap2;RS=rs276564927;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	288583974	288584073	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:281827263;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288584845	288584944	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281828136;1allele=C/G;version=Hapmap1;RS=rs131904799;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	288665580	288665679	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:281864194;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288668419	288668518	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:281867033;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288687112	288687211	.	+	.	Name=Days_to_silk;B73v2_pos=1:281885728;1allele=C/T;version=Hapmap2;RS=rs276565099;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	288689490	288689589	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:281888106;1allele=T/C;version=Hapmap1;RS=rs128965591;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	288691877	288691976	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:281890493;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288706888	288706987	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:281905506;1allele=T/C;version=Hapmap2;RS=rs276565195;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	288708133	288708232	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:281906751;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	288708278	288708377	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:281906896;1allele=A/T;version=Hapmap2;RS=rs276565199;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	288708646	288708745	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:281907264;1allele=G/T;version=Hapmap2;RS=rs128965666;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	288749578	288749677	.	+	.	Name=Days_to_silk;B73v2_pos=1:281949222;1allele=G/A;version=Hapmap2;RS=rs1062323815;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	288930959	288931058	.	+	.	Name=Leaf_length;B73v2_pos=1:282122141;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289135832	289135931	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:282360352;1allele=/ATCT;version=Hapmap1;RS=rs131905265;2ref_allele=C;3alt_allele=CT
chr1	Wallace_2014	SNP	289254935	289255034	.	+	.	Name=Days_to_silk;B73v2_pos=1:282440946;1allele=G/A;version=Hapmap2;RS=rs725116319;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	289275596	289275695	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282461610;1allele=T/C;version=Hapmap2;RS=rs131905345;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	289275728	289275827	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:282461742;1allele=C/T;version=Hapmap2;RS=rs276565558;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	289275761	289275860	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:282461775;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289275859	289275958	.	+	.	Name=Days_to_silk;B73v2_pos=1:282461873;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289276246	289276345	.	+	.	Name=Days_to_silk;B73v2_pos=1:282462260;1allele=C/T;version=Hapmap1;RS=rs131905366;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	289283050	289283149	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:282469064;1allele=G/T;version=Hapmap2;RS=rs725115593;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	289284587	289284686	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:282470601;1allele=C/G;version=Hapmap2;RS=rs131905408;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	289285477	289285576	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282471491;1allele=T/C;version=Hapmap2;RS=rs831801070;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	289286631	289286730	.	+	.	Name=Tassel_length;B73v2_pos=1:282472645;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289342739	289342838	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:282528692;1allele=C/G;version=Hapmap1;RS=rs128966443;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	289345610	289345709	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:282531563;1allele=T/G;version=Hapmap2;RS=rs869657476;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	289355427	289355526	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282541380;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289355448	289355547	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282541401;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289365611	289365710	.	+	.	Name=Leaf_length;B73v2_pos=1:282551564;1allele=T/G;version=Hapmap2;RS=rs803697485;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	289402101	289402200	.	+	.	Name=Leaf_length;B73v2_pos=1:282586221;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289464749	289464848	.	+	.	Name=Days_to_silk;B73v2_pos=1:282648807;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289488510	289488609	.	+	.	Name=Leaf_length;B73v2_pos=1:282672568;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289499137	289499236	.	+	.	Name=Leaf_length;B73v2_pos=1:282683195;1allele=G/T;version=Hapmap2;RS=rs1060596334;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	289500778	289500877	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:282684836;1allele=C/A;version=Hapmap2;RS=rs128966981;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	289502856	289502955	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282686913;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289502866	289502965	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282686923;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289537241	289537340	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282721305;1allele=G/A;version=Hapmap2;RS=rs128967004;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	289538971	289539070	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282723035;1allele=C/G;version=Hapmap2;RS=rs128967011;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	289539044	289539143	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282723108;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289563595	289563694	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282747659;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289564357	289564456	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282748421;1allele=G/A;version=Hapmap2;RS=rs128967097;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	289582331	289582430	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282766395;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289594330	289594429	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282778396;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289604327	289604426	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282788393;1allele=A/G;version=Hapmap1;RS=rs131905865;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	289612504	289612603	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282796570;1allele=C/T;version=Hapmap2;RS=rs824107045;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	289614581	289614680	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:282798647;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289622056	289622155	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282806134;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289660415	289660514	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282844442;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	289712364	289712463	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:282897109;1allele=G/T;version=Hapmap2;RS=rs724582830;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	289866091	289866190	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283090201;1allele=G/C;version=Hapmap2;RS=rs837339476;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	289976027	289976126	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283190894;1allele=G/A;version=Hapmap2;RS=rs276567013;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	289978908	289979007	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283193775;1allele=C/T;version=Hapmap2;RS=rs276567057;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	289978917	289979016	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283193784;1allele=C/A;version=Hapmap2;RS=rs276567058;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	289994278	289994377	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:283207755;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290037783	290037882	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:283249225;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290045925	290046024	.	+	.	Name=Ear_height;B73v2_pos=1:283257367;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290046048	290046147	.	+	.	Name=Ear_height;B73v2_pos=1:283257490;1allele=T/C;version=Hapmap2;RS=rs128967495;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	290097249	290097348	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:283308706;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290110448	290110547	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283321905;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290110458	290110557	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283321915;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290114306	290114405	.	+	.	Name=Ear_height;B73v2_pos=1:283325760;1allele=C/T;version=Hapmap2;RS=rs276567285;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	290141486	290141585	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283427425;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290144485	290144584	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:283430424;1allele=G/A;version=Hapmap2;RS=rs828967789;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	290173653	290173752	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:283352586;1allele=G/C;version=Hapmap2;RS=rs1062857756;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	290175741	290175840	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:283354674;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290179758	290179857	.	+	.	Name=Stalk_strength;B73v2_pos=1:283358691;1allele=C/T;version=Hapmap2;RS=rs726385018;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	290181832	290181931	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:283360765;1allele=G/A;version=Hapmap2;RS=rs131906449;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	290185006	290185105	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:283363939;1allele=C/T;version=Hapmap2;RS=rs727268083;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	290190508	290190607	.	+	.	Name=Ear_height;B73v2_pos=1:283369441;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290211954	290212053	.	+	.	Name=Leaf_width;B73v2_pos=1:283390887;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290238155	290238254	.	+	.	Name=Days_to_silk;B73v2_pos=1:283417091;1allele=G/A;version=Hapmap2;RS=rs131906479;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	290321977	290322076	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:283515506;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290326106	290326205	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283519635;1allele=A/G;version=Hapmap2;RS=rs128968078;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	290334874	290334973	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283528403;1allele=GA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290334889	290334988	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283528418;1allele=A/T;version=Hapmap2;RS=rs276567741;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	290338164	290338263	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283531693;1allele=C/T;version=Hapmap2;RS=rs131906622;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	290338209	290338308	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283531738;1allele=C/T;version=Hapmap2;RS=rs869586787;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	290349146	290349245	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283542685;1allele=C/T;version=Hapmap2;RS=rs128968180;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	290349156	290349255	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:283542695;1allele=A/G;version=Hapmap2;RS=rs1064278327;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	290349342	290349441	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:283542881;1allele=C/T;version=Hapmap2;RS=rs276567782;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	290349342	290349441	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283542881;1allele=C/T;version=Hapmap2;RS=rs276567782;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	290350788	290350887	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:283544327;1allele=A/G;version=Hapmap2;RS=rs128968205;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	290358278	290358377	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283551740;1allele=T/C;version=Hapmap2;RS=rs128968245;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	290365645	290365744	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283559108;1allele=G/T;version=Hapmap2;RS=rs128968305;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	290387900	290387999	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283581363;1allele=T/A;version=Hapmap2;RS=rs804363583;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	290388355	290388454	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283581818;1allele=/CGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290405836	290405935	.	+	.	Name=Ear_row_number;B73v2_pos=1:283597449;1allele=A/G;version=Hapmap2;RS=rs1064530014;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	290411828	290411927	.	+	.	Name=Stalk_strength;B73v2_pos=1:283603440;1allele=A/C;version=Hapmap2;RS=rs128968473;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	290617823	290617922	.	+	.	Name=Stalk_strength;B73v2_pos=1:283838900;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290750644	290750743	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:283942547;1allele=G/A;version=Hapmap2;RS=rs276568435;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	290809158	290809257	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:284012967;1allele=T/C;version=Hapmap1;RS=rs131906988;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	290812566	290812665	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:284016375;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	290858981	290859080	.	+	.	Name=Ear_row_number;B73v2_pos=1:284062790;1allele=C/G;version=Hapmap2;RS=rs847002909;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	290903554	290903653	.	+	.	Name=Leaf_length;B73v2_pos=1:284107365;1allele=A/G;version=Hapmap2;RS=rs835090269;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	290916801	290916900	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:284120798;1allele=A/G;version=Hapmap2;RS=rs1062100956;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	291297146	291297245	.	+	.	Name=Cob_diameter;B73v2_pos=1:284502158;1allele=C/T;version=Hapmap2;RS=rs1064173823;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	291297944	291298043	.	+	.	Name=Stalk_strength;B73v2_pos=1:284502956;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291361420	291361519	.	+	.	Name=Leaf_width;B73v2_pos=1:284566034;1allele=G/T;version=Hapmap2;RS=rs1062845543;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	291418384	291418483	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:284614058;1allele=A/G;version=Hapmap2;RS=rs1062495237;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	291423605	291423704	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:284619281;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291424788	291424887	.	+	.	Name=Cob_diameter;B73v2_pos=1:284620464;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291426924	291427023	.	+	.	Name=Cob_diameter;B73v2_pos=1:284622600;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291478277	291478376	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:284667026;1allele=C/T;version=Hapmap2;RS=rs276569256;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	291479555	291479654	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:284668304;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291479822	291479921	.	+	.	Name=Stalk_strength;B73v2_pos=1:284668571;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291480489	291480588	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:284669238;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291482121	291482220	.	+	.	Name=Cob_diameter;B73v2_pos=1:284670870;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291487324	291487423	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:284675933;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291506444	291506543	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:284684343;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291506922	291507021	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:284684821;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291536286	291536385	.	+	.	Name=Leaf_length;B73v2_pos=1:284728148;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291555933	291556032	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:284747795;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291555933	291556032	.	+	.	Name=Days_to_silk;B73v2_pos=1:284747795;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291555933	291556032	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:284747795;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291571061	291571160	.	+	.	Name=Leaf_width;B73v2_pos=1:284762924;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291599373	291599472	.	+	.	Name=Leaf_length;B73v2_pos=1:284798356;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291682142	291682241	.	+	.	Name=Ear_height;B73v2_pos=1:284889032;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291691661	291691760	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:284896671;1allele=T/C;version=Hapmap2;RS=rs806375119;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	291705801	291705900	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:284910875;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291706490	291706589	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:284911564;1allele=A/G;version=Hapmap2;RS=rs276569710;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	291706585	291706684	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:284911659;1allele=A/G;version=Hapmap2;RS=rs131907217;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	291765450	291765549	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:284999320;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291793895	291793994	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:284976193;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291796337	291796436	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:285005055;1allele=G/C;version=Hapmap1;RS=rs726325732;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	291809607	291809706	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:285018323;1allele=T/C;version=Hapmap2;RS=rs1062798506;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	291811327	291811426	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:285020043;1allele=C/T;version=Hapmap2;RS=rs128969992;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	291839495	291839594	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:285047875;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291842568	291842667	.	+	.	Name=Leaf_width;B73v2_pos=1:285050948;1allele=G/A;version=Hapmap1;RS=rs131907267;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	291848612	291848711	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:285056992;1allele=C/G;version=Hapmap2;RS=rs276569917;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	291849534	291849633	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:285057914;1allele=C/A;version=Hapmap2;RS=rs1061854911;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	291857055	291857154	.	+	.	Name=Leaf_length;B73v2_pos=1:285065435;1allele=C/T;version=Hapmap2;RS=rs128970149;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	291864659	291864758	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:285073040;1allele=C/G;version=Hapmap2;RS=rs128970192;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	291886916	291887015	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:285095300;1allele=C/G;version=Hapmap1;RS=rs131907504;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	291886916	291887015	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:285095300;1allele=C/G;version=Hapmap1;RS=rs131907504;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	291887771	291887870	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:285096155;1allele=/GCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291889465	291889564	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:285097846;1allele=G/A;version=Hapmap2;RS=rs1062269272;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	291898258	291898357	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:285106641;1allele=C/T;version=Hapmap2;RS=rs128970304;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	291900970	291901069	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:285109353;1allele=G/T;version=Hapmap2;RS=rs276570165;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	291917625	291917724	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:285126008;1allele=C/A;version=Hapmap2;RS=rs128970367;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	291921619	291921718	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:285130002;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	291930126	291930225	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:285138509;1allele=G/A;version=Hapmap2;RS=rs276570300;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	292020195	292020294	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:285228602;1allele=C/A;version=Hapmap2;RS=rs845105594;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	292022588	292022687	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:285230995;1allele=A/G;version=Hapmap2;RS=rs128970690;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	292189892	292189991	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:285391730;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292323333	292323432	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:285523097;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292323558	292323657	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:285523322;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292326709	292326808	.	+	.	Name=Days_to_silk;B73v2_pos=1:285526473;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292328549	292328648	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:285528313;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292328549	292328648	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:285528313;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292331523	292331622	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:285531287;1allele=G/A;version=Hapmap2;RS=rs131908245;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	292375033	292375132	.	+	.	Name=Stalk_strength;B73v2_pos=1:285571322;1allele=T/G;version=Hapmap2;RS=rs1062264112;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	292389141	292389240	.	+	.	Name=Tassel_length;B73v2_pos=1:285585435;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292575342	292575441	.	+	.	Name=Plant_height;B73v2_pos=1:285784021;1allele=C/A;version=Hapmap1;RS=rs131908368;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	292575515	292575614	.	+	.	Name=Plant_height;B73v2_pos=1:285784194;1allele=G/C;version=Hapmap1;RS=rs131908373;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	292706128	292706227	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:285912036;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292719493	292719592	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:285925401;1allele=G/T;version=Hapmap2;RS=rs128971209;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	292719855	292719954	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:285925763;1allele=T/A;version=Hapmap1;RS=rs128971210;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	292722235	292722334	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:285928143;1allele=A/G;version=Hapmap2;RS=rs848785822;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	292754628	292754727	.	+	.	Name=Stalk_strength;B73v2_pos=1:285961812;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	292769492	292769591	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:285976654;1allele=G/C;version=Hapmap2;RS=rs1063627571;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	292773071	292773170	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:285980233;1allele=C/T;version=Hapmap2;RS=rs128971284;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	292774278	292774377	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:285981439;1allele=T/C;version=Hapmap1;RS=rs131908704;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	292822764	292822863	.	+	.	Name=Stalk_strength;B73v2_pos=1:286021593;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293008793	293008892	.	+	.	Name=Plant_height;B73v2_pos=1:286182262;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293008793	293008892	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:286182262;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293008926	293009025	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:286182129;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293008926	293009025	.	+	.	Name=Ear_height;B73v2_pos=1:286182129;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293008926	293009025	.	+	.	Name=Plant_height;B73v2_pos=1:286182129;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293014584	293014683	.	+	.	Name=Plant_height;B73v2_pos=1:286176471;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293015195	293015294	.	+	.	Name=Ear_height;B73v2_pos=1:286175860;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293015881	293015980	.	+	.	Name=Plant_height;B73v2_pos=1:286175174;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293016111	293016210	.	+	.	Name=Ear_height;B73v2_pos=1:286174944;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293016252	293016351	.	+	.	Name=Plant_height;B73v2_pos=1:286174803;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293016688	293016787	.	+	.	Name=Ear_height;B73v2_pos=1:286174367;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293018478	293018577	.	+	.	Name=Plant_height;B73v2_pos=1:286172577;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293018478	293018577	.	+	.	Name=Ear_height;B73v2_pos=1:286172577;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293038281	293038380	.	+	.	Name=Stalk_strength;B73v2_pos=1:286233503;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293043918	293044017	.	+	.	Name=Stalk_strength;B73v2_pos=1:286247421;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293059046	293059145	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:286237924;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293062039	293062138	.	+	.	Name=Days_to_silk;B73v2_pos=1:286240917;1allele=G/C;version=Hapmap1;RS=rs128971586;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	293062396	293062495	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:286241274;1allele=C/G;version=Hapmap1;RS=rs131908948;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	293062396	293062495	.	+	.	Name=Ear_height;B73v2_pos=1:286241274;1allele=C/G;version=Hapmap1;RS=rs131908948;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	293076482	293076581	.	+	.	Name=Leaf_length;B73v2_pos=1:286265019;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293128058	293128157	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:286315326;1allele=T/C;version=Hapmap2;RS=rs276572136;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	293128192	293128291	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:286315460;1allele=T/C;version=Hapmap2;RS=rs128971619;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	293128331	293128430	.	+	.	Name=Days_to_silk;B73v2_pos=1:286315599;1allele=A/C;version=Hapmap2;RS=rs128971622;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	293128407	293128506	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:286315675;1allele=A/C;version=Hapmap2;RS=rs128971624;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	293129782	293129881	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:286316583;1allele=C/T;version=Hapmap2;RS=rs128971626;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	293129827	293129926	.	+	.	Name=Ear_height;B73v2_pos=1:286316628;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293130618	293130717	.	+	.	Name=Plant_height;B73v2_pos=1:286317419;1allele=C/G;version=Hapmap2;RS=rs725022995;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	293130968	293131067	.	+	.	Name=Plant_height;B73v2_pos=1:286317769;1allele=A/G;version=Hapmap2;RS=rs725745883;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	293130968	293131067	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:286317769;1allele=A/G;version=Hapmap2;RS=rs725745883;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	293215387	293215486	.	+	.	Name=Stalk_strength;B73v2_pos=1:286401238;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293328897	293328996	.	+	.	Name=Days_to_silk;B73v2_pos=1:286513020;1allele=/TCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293343653	293343752	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:286527776;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293374446	293374509	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:286558646;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293394459	293394558	.	+	.	Name=Stalk_strength;B73v2_pos=1:286578695;1allele=G/A;version=Hapmap2;RS=rs1062689168;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	293412510	293412609	.	+	.	Name=Ear_height;B73v2_pos=1:286597175;1allele=C/T;version=Hapmap2;RS=rs1063008845;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	293415087	293415186	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:286599753;1allele=C/T;version=Hapmap2;RS=rs128972246;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	293415619	293415718	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:286600285;1allele=G/T;version=Hapmap2;RS=rs128972262;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	293480864	293480963	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:286656021;1allele=/GGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293529469	293529568	.	+	.	Name=Tassel_length;B73v2_pos=1:286715101;1allele=A/G;version=Hapmap2;RS=rs276573170;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	293529474	293529573	.	+	.	Name=Tassel_length;B73v2_pos=1:286715106;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293530289	293530388	.	+	.	Name=Ear_row_number;B73v2_pos=1:286715921;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293767892	293767991	.	+	.	Name=Days_to_silk;B73v2_pos=1:286957319;1allele=G/A;version=Hapmap2;RS=rs1062577445;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	293831486	293831585	.	+	.	Name=Stalk_strength;B73v2_pos=1:287022863;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293836380	293836479	.	+	.	Name=Stalk_strength;B73v2_pos=1:287027757;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293865052	293865151	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:287056432;1allele=C/T;version=Hapmap2;RS=rs128973225;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	293922556	293922655	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:287113260;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293940943	293941042	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:287131657;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293956799	293956898	.	+	.	Name=Days_to_silk;B73v2_pos=1:287147402;1allele=T/G;version=Hapmap1;RS=rs802395631;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	293996933	293997032	.	+	.	Name=Stalk_strength;B73v2_pos=1:287184307;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	293998193	293998292	.	+	.	Name=Days_to_silk;B73v2_pos=1:287185567;1allele=G/A;version=Hapmap1;RS=rs131910369;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	294000636	294000735	.	+	.	Name=Days_to_silk;B73v2_pos=1:287188010;1allele=A/G;version=Hapmap2;RS=rs131910382;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	294367713	294367812	.	+	.	Name=Starch;B73v2_pos=1:287561717;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294399716	294399815	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:287593723;1allele=G/A;version=Hapmap2;RS=rs1061865807;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	294441297	294441396	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:287634999;1allele=A/G;version=Hapmap2;RS=rs804867337;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	294529405	294529504	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:287720087;1allele=C/T;version=Hapmap1;RS=rs832756896;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	294530006	294530105	.	+	.	Name=Tassel_length;B73v2_pos=1:287720688;1allele=G/T;version=Hapmap2;RS=rs1062453186;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	294534853	294534952	.	+	.	Name=Leaf_length;B73v2_pos=1:287725535;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294534858	294534957	.	+	.	Name=Leaf_length;B73v2_pos=1:287725540;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294534901	294535000	.	+	.	Name=Leaf_length;B73v2_pos=1:287725583;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294534909	294535008	.	+	.	Name=Tassel_length;B73v2_pos=1:287725591;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294539649	294539748	.	+	.	Name=Tassel_length;B73v2_pos=1:287730331;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294547374	294547473	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:287738056;1allele=A/G;version=Hapmap2;RS=rs128974162;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	294548268	294548367	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:287738950;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294549187	294549286	.	+	.	Name=Tassel_length;B73v2_pos=1:287739869;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294570457	294570556	.	+	.	Name=Days_to_silk;B73v2_pos=1:287761140;1allele=A/G;version=Hapmap2;RS=rs841605064;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	294615627	294615726	.	+	.	Name=Leaf_length;B73v2_pos=1:287806387;1allele=G/A;version=Hapmap2;RS=rs815596754;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	294615902	294616001	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:287806662;1allele=T/C;version=Hapmap2;RS=rs1061962406;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	294661163	294661262	.	+	.	Name=Total_amino_acids;B73v2_pos=1:287851924;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294710843	294710942	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:287881971;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294768189	294768288	.	+	.	Name=Days_to_silk;B73v2_pos=1:287939411;1allele=A/G;version=Hapmap2;RS=rs128974629;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	294791540	294791639	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:287963790;1allele=C/T;version=Hapmap2;RS=rs724175508;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	294848500	294848599	.	+	.	Name=Ear_row_number;B73v2_pos=1:288019031;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294908982	294909081	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:288078954;1allele=T/C;version=Hapmap2;RS=rs808822784;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	294934763	294934862	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:288105242;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294944580	294944679	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:288115058;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	294998459	294998558	.	+	.	Name=Stalk_strength;B73v2_pos=1:288168392;1allele=T/G;version=Hapmap2;RS=rs814958468;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	295298576	295298675	.	+	.	Name=Days_to_silk;B73v2_pos=1:288290107;1allele=C/T;version=Hapmap2;RS=rs128975171;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	295330102	295330201	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:288382315;1allele=T/G;version=Hapmap2;RS=rs833313783;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	295330919	295331018	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:288383132;1allele=T/G;version=Hapmap2;RS=rs128975215;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	295340882	295340981	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:288393095;1allele=T/A;version=Hapmap2;RS=rs849174167;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	295530679	295530778	.	+	.	Name=Days_to_silk;B73v2_pos=1:288592753;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	295586161	295586260	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:288637667;1allele=A/G;version=Hapmap2;RS=rs128975442;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	295681494	295681593	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:288657731;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	295714565	295714664	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:288735803;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	295741728	295741827	.	+	.	Name=Ear_row_number;B73v2_pos=1:288761603;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	295742061	295742160	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:288761936;1allele=G/C;version=Hapmap1;RS=rs131912238;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	295742369	295742468	.	+	.	Name=Ear_row_number;B73v2_pos=1:288762244;1allele=C/T;version=Hapmap2;RS=rs131912244;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	295742369	295742468	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:288762244;1allele=C/T;version=Hapmap2;RS=rs131912244;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	295905262	295905361	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:288918507;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296006092	296006191	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:289010627;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296030102	296030201	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:289042951;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296100340	296100439	.	+	.	Name=Leaf_length;B73v2_pos=1:289114061;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296210784	296210883	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:289221637;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296223298	296223397	.	+	.	Name=Ear_row_number;B73v2_pos=1:289233934;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296227785	296227884	.	+	.	Name=Starch;B73v2_pos=1:289238425;1allele=A/G;version=Hapmap2;RS=rs812862343;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	296228457	296228556	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:289239095;1allele=T/C;version=Hapmap1;RS=rs131912652;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	296256574	296256673	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:289267220;1allele=C/T;version=Hapmap2;RS=rs276577202;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	296256578	296256677	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:289267224;1allele=C/G;version=Hapmap1;RS=rs131912666;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	296325102	296325201	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:289335238;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296352053	296352152	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:289362004;1allele=C/T;version=Hapmap2;RS=rs1063435874;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	296556688	296556787	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:289548236;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296729935	296730034	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:289721506;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296811388	296811487	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:289774029;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296854448	296854547	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:289841157;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296854520	296854619	.	+	.	Name=Days_to_silk;B73v2_pos=1:289841229;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296855636	296855735	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:289842345;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	296859177	296859276	.	+	.	Name=Protein;B73v2_pos=1:289845886;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	297030690	297030789	.	+	.	Name=Protein;B73v2_pos=1:290011081;1allele=T/C;version=Hapmap2;RS=rs726339891;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	297154196	297154295	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:290133378;1allele=A/G;version=Hapmap2;RS=rs828856386;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	297163169	297163257	.	+	.	Name=Stalk_strength;B73v2_pos=1:290154940;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	297222847	297222946	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:290200188;1allele=+/-;version=Hapmap2;RS=rs131913701;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	297227079	297227178	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290204420;1allele=T/G;version=Hapmap2;RS=rs128977281;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	297311694	297311793	.	+	.	Name=Stalk_strength;B73v2_pos=1:290299121;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	297315300	297315399	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:290302727;1allele=A/G;version=Hapmap2;RS=rs276579613;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	297461407	297461506	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290447530;1allele=T/C;version=Hapmap2;RS=rs128977689;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	297535744	297535843	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:290521880;1allele=G/A;version=Hapmap1;RS=rs131914191;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	297566366	297566465	.	+	.	Name=Leaf_length;B73v2_pos=1:290552376;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	297615324	297615423	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290598320;1allele=T/C;version=Hapmap2;RS=rs824324453;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	297820104	297820203	.	+	.	Name=Cob_diameter;B73v2_pos=1:290805464;1allele=cnv;version=CNV_genic;RS=rs833152782;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	297977745	297977844	.	+	.	Name=Fumarate;B73v2_pos=1:290954935;1allele=C/T;version=Hapmap1;RS=rs131914801;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	297983596	297983695	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290960786;1allele=A/G;version=Hapmap2;RS=rs805411444;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	297984069	297984168	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290961259;1allele=G/A;version=Hapmap2;RS=rs824673805;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	297984085	297984184	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290961275;1allele=G/A;version=Hapmap2;RS=rs828746114;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	297985063	297985163	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290962253;1allele=T/G;version=Hapmap2;RS=rs828221780;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	297985814	297985913	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290963003;1allele=C/T;version=Hapmap2;RS=rs835019127;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	297985957	297986056	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290963146;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	297986966	297987065	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:290964155;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298009291	298009390	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:290986482;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298025468	298025567	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291018608;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298638304	298638403	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291631265;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298677260	298677359	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291668843;1allele=G/A;version=Hapmap2;RS=rs820750861;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	298731821	298731920	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291725295;1allele=G/A;version=Hapmap2;RS=rs128979308;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	298789882	298789981	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291781278;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298789888	298789987	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291781284;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298889604	298889703	.	+	.	Name=Fumarate;B73v2_pos=1:291880536;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298890982	298891081	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291881914;1allele=A/G;version=Hapmap2;RS=rs821836352;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	298910569	298910668	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:291901501;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	298912499	298912598	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:291903431;1allele=C/A;version=Hapmap2;RS=rs276582932;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	299069003	299069102	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:292061580;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	299238062	299238161	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:292226847;1allele=G/A;version=Hapmap2;RS=rs1062319520;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	299349605	299349704	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:292337201;1allele=-/G;version=Hapmap1;RS=rs803524501;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	299543808	299543907	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:292525481;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	299589921	299590020	.	+	.	Name=Ear_row_number;B73v2_pos=1:292571842;1allele=C/G;version=Hapmap2;RS=rs276584318;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	299605930	299606029	.	+	.	Name=Starch;B73v2_pos=1:292587852;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	299826820	299826919	.	+	.	Name=Ear_row_number;B73v2_pos=1:292823051;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	299905626	299905725	.	+	.	Name=Stalk_strength;B73v2_pos=1:292883365;1allele=T/C;version=Hapmap1;RS=rs131916706;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	299916089	299916188	.	+	.	Name=Stalk_strength;B73v2_pos=1:292893379;1allele=T/C;version=Hapmap2;RS=rs131916725;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	299920914	299921013	.	+	.	Name=Stalk_strength;B73v2_pos=1:292898204;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300029587	300029686	.	+	.	Name=Leaf_length;B73v2_pos=1:293001481;1allele=A/G;version=Hapmap2;RS=rs1060882542;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	300082132	300082231	.	+	.	Name=Ear_row_number;B73v2_pos=1:293052746;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300174936	300175035	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:293143337;1allele=C/A;version=Hapmap2;RS=rs839481037;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	300183975	300184074	.	+	.	Name=Starch;B73v2_pos=1:293152376;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300423444	300423543	.	+	.	Name=Starch;B73v2_pos=1:293393907;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300448219	300448318	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293418682;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300486173	300486272	.	+	.	Name=Starch;B73v2_pos=1:293456638;1allele=A/G;version=Hapmap2;RS=rs276585795;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	300602133	300602232	.	+	.	Name=Chlorophyll_A;B73v2_pos=1:293576647;1allele=G/C;version=Hapmap2;RS=rs276586072;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	300683083	300683182	.	+	.	Name=Starch;B73v2_pos=1:293627657;1allele=A/T;version=Hapmap2;RS=rs276586247;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	300683193	300683292	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293627767;1allele=A/C;version=Hapmap1;RS=rs131917779;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	300683205	300683304	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293627779;1allele=T/C;version=Hapmap2;RS=rs830262335;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	300683281	300683380	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293627855;1allele=C/T;version=Hapmap2;RS=rs131917781;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	300839168	300839267	.	+	.	Name=Leaf_width;B73v2_pos=1:293837056;1allele=C/T;version=Hapmap2;RS=rs726641855;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	300935254	300935353	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293936635;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300935625	300935724	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293937006;1allele=T/C;version=Hapmap2;RS=rs128982945;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	300936111	300936210	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293937492;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300938724	300938823	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293940105;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	300940284	300940383	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293941665;1allele=G/C;version=Hapmap1;RS=rs276586499;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	300995362	300995461	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:293999108;1allele=A/G;version=Hapmap1;RS=rs131918314;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	301034851	301034950	.	+	.	Name=Stalk_strength;B73v2_pos=1:294038599;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	301063351	301063450	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:294067103;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	301223832	301223931	.	+	.	Name=Starch;B73v2_pos=1:294228493;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	301645833	301645932	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:294657049;1allele=C/G;version=Hapmap2;RS=rs726409225;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	301724365	301724464	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:294728927;1allele=C/T;version=Hapmap2;RS=rs128983704;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	301725136	301725235	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:294729698;1allele=G/A;version=Hapmap2;RS=rs55624183;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	301725525	301725624	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:294730087;1allele=G/A;version=Hapmap2;RS=rs128983712;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	301833364	301833463	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:294842827;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	301896751	301896850	.	+	.	Name=Ear_row_number;B73v2_pos=1:294899265;1allele=C/T;version=Hapmap2;RS=rs128984287;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	301999675	301999774	.	+	.	Name=Ear_row_number;B73v2_pos=1:294924652;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	302246530	302246629	.	+	.	Name=Ear_row_number;B73v2_pos=1:295269947;1allele=A/G;version=Hapmap2;RS=rs276588285;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	302259975	302260074	.	+	.	Name=Starch;B73v2_pos=1:295298424;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	302261733	302261832	.	+	.	Name=Stalk_strength;B73v2_pos=1:295300182;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	302265399	302265498	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:295303853;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	302276255	302276354	.	+	.	Name=Stalk_strength;B73v2_pos=1:295314709;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	302398208	302398307	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:295436422;1allele=G/T;version=Hapmap2;RS=rs128985032;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	302495437	302495536	.	+	.	Name=Ear_row_number;B73v2_pos=1:295533653;1allele=G/A;version=Hapmap2;RS=rs807104752;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	302498899	302498998	.	+	.	Name=Starch;B73v2_pos=1:295537115;1allele=C/A;version=Hapmap2;RS=rs276588955;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	302500567	302500666	.	+	.	Name=Ear_row_number;B73v2_pos=1:295538783;1allele=C/T;version=Hapmap2;RS=rs128985536;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	302529952	302530051	.	+	.	Name=Ear_row_number;B73v2_pos=1:295568168;1allele=C/T;version=Hapmap2;RS=rs128985630;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	302688636	302688735	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:295724713;1allele=A/C;version=Hapmap2;RS=rs276589415;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	302691168	302691267	.	+	.	Name=Cob_diameter;B73v2_pos=1:295727245;1allele=G/A;version=Hapmap2;RS=rs276589442;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	302840500	302840599	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:295889723;1allele=A/G;version=Hapmap2;RS=rs839330719;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	302841498	302841597	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:295890721;1allele=T/C;version=Hapmap2;RS=rs725721188;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	302938885	302938984	.	+	.	Name=Ear_row_number;B73v2_pos=1:295990632;1allele=C/T;version=Hapmap2;RS=rs820762510;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	302942539	302942638	.	+	.	Name=Ear_row_number;B73v2_pos=1:295994037;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	302942607	302942706	.	+	.	Name=Ear_row_number;B73v2_pos=1:295994105;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	302960239	302960338	.	+	.	Name=Ear_row_number;B73v2_pos=1:296011737;1allele=G/A;version=Hapmap2;RS=rs128986489;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	302970193	302970292	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:296021691;1allele=T/C;version=Hapmap2;RS=rs810699580;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	302971897	302971996	.	+	.	Name=Cob_diameter;B73v2_pos=1:296023395;1allele=G/T;version=Hapmap2;RS=rs128986598;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	302971897	302971996	.	+	.	Name=Ear_row_number;B73v2_pos=1:296023395;1allele=G/T;version=Hapmap2;RS=rs128986598;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	302971949	302972048	.	+	.	Name=Cob_diameter;B73v2_pos=1:296023447;1allele=A/G;version=Hapmap2;RS=rs128986599;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	302972024	302972123	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:296023522;1allele=G/A;version=Hapmap2;RS=rs128986600;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	302973480	302973579	.	+	.	Name=Cob_diameter;B73v2_pos=1:296024978;1allele=T/A;version=Hapmap2;RS=rs276589895;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	302974343	302974442	.	+	.	Name=Cob_diameter;B73v2_pos=1:296025841;1allele=C/T;version=Hapmap1;RS=rs131920564;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303085655	303085754	.	+	.	Name=Cob_diameter;B73v2_pos=1:296156399;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303135652	303135751	.	+	.	Name=Cob_diameter;B73v2_pos=1:296204411;1allele=C/A;version=Hapmap2;RS=rs128986761;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	303137724	303137823	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:296206483;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303158906	303159005	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:296232172;1allele=G/T;version=Hapmap2;RS=rs128986802;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	303177645	303177744	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:296250911;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303179421	303179520	.	+	.	Name=Ear_row_number;B73v2_pos=1:296252687;1allele=A/C;version=Hapmap1;RS=rs131920770;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	303179509	303179608	.	+	.	Name=Ear_row_number;B73v2_pos=1:296252775;1allele=T/G;version=Hapmap1;RS=rs131920773;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	303180362	303180461	.	+	.	Name=Ear_row_number;B73v2_pos=1:296253628;1allele=G/A;version=Hapmap2;RS=rs276590150;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	303187179	303187278	.	+	.	Name=Ear_row_number;B73v2_pos=1:296260445;1allele=G/A;version=Hapmap2;RS=rs276590200;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	303213445	303213544	.	+	.	Name=Starch;B73v2_pos=1:296286712;1allele=G/A;version=Hapmap2;RS=rs1061228412;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	303216269	303216368	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296289536;1allele=C/T;version=Hapmap2;RS=rs1062927584;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303232213	303232312	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:296305479;1allele=G/T;version=Hapmap2;RS=rs1060702464;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	303268076	303268175	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296341400;1allele=C/T;version=Hapmap2;RS=rs838902847;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303269413	303269512	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296342737;1allele=T/C;version=Hapmap2;RS=rs276590300;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	303297556	303297655	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296372334;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303345931	303346030	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296410763;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303350810	303350909	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296415642;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303351500	303351599	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296416332;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303352139	303352238	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296416971;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303481768	303481867	.	+	.	Name=Ear_height;B73v2_pos=1:296547711;1allele=C/T;version=Hapmap2;RS=rs1061276783;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303495481	303495580	.	+	.	Name=Ear_row_number;B73v2_pos=1:296561462;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303504827	303504926	.	+	.	Name=Ear_height;B73v2_pos=1:296570809;1allele=A/T;version=Hapmap2;RS=rs276590649;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	303506067	303506166	.	+	.	Name=Stalk_strength;B73v2_pos=1:296572049;1allele=C/T;version=Hapmap2;RS=rs128987421;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303546170	303546269	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296614614;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303548318	303548417	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296616762;1allele=C/T;version=Hapmap2;RS=rs128987580;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	303548673	303548772	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296617114;1allele=C/T;version=Hapmap2;RS=rs131921002;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303559625	303559724	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296628067;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303559695	303559794	.	+	.	Name=Stalk_strength;B73v2_pos=1:296628137;1allele=G/A;version=Hapmap2;RS=rs1062852655;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	303564340	303564439	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296632782;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303587802	303587901	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296649027;1allele=C/A;version=Hapmap2;RS=rs1063780874;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	303597814	303597913	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:296658993;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303598270	303598369	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:296659449;1allele=G/A;version=Hapmap2;RS=rs1062683237;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	303642822	303642921	.	+	.	Name=Ear_height;B73v2_pos=1:296707286;1allele=G/T;version=Hapmap2;RS=rs128987713;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	303642934	303643033	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296707398;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303645056	303645155	.	+	.	Name=Stalk_strength;B73v2_pos=1:296709520;1allele=G/A;version=Hapmap1;RS=rs131921147;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	303646361	303646460	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:296710825;1allele=G/T;version=Hapmap2;RS=rs276591187;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	303702513	303702612	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296766909;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303786657	303786756	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296848983;1allele=G/A;version=Hapmap1;RS=rs128987861;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303822929	303823028	.	+	.	Name=Stalk_strength;B73v2_pos=1:296883759;1allele=G/A;version=Hapmap2;RS=rs727355603;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	303834588	303834687	.	+	.	Name=Stalk_strength;B73v2_pos=1:296895417;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	303850263	303850362	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:296911091;1allele=A/G;version=Hapmap2;RS=rs1060741068;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	303865241	303865340	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:296926072;1allele=A/G;version=Hapmap2;RS=rs1063238751;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	303865456	303865555	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296926287;1allele=C/T;version=Hapmap2;RS=rs276591750;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	303880849	303880948	.	+	.	Name=Tassel_length;B73v2_pos=1:296941681;1allele=A/C;version=Hapmap1;RS=rs131921607;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	303881611	303881710	.	+	.	Name=Ear_row_number;B73v2_pos=1:296942443;1allele=T/C;version=Hapmap2;RS=rs128988099;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	303898158	303898257	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296959590;1allele=G/A;version=Hapmap2;RS=rs809249380;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	303930394	303930493	.	+	.	Name=Tassel_length;B73v2_pos=1:296991834;1allele=G/T;version=Hapmap2;RS=rs128988297;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	303931874	303931973	.	+	.	Name=Ear_row_number;B73v2_pos=1:296993314;1allele=A/G;version=Hapmap1;RS=rs128988308;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	303951843	303951942	.	+	.	Name=Ear_row_number;B73v2_pos=1:297013282;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304216612	304216711	.	+	.	Name=Stalk_strength;B73v2_pos=1:297258898;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304623125	304623224	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:297659377;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304629568	304629667	.	+	.	Name=Stalk_strength;B73v2_pos=1:297665820;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304629579	304629678	.	+	.	Name=Stalk_strength;B73v2_pos=1:297665831;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304745416	304745515	.	+	.	Name=Ear_row_number;B73v2_pos=1:297798027;1allele=G/C;version=Hapmap2;RS=rs276593408;2ref_allele=C;3alt_allele=G
chr1	Wallace_2014	SNP	304810303	304810402	.	+	.	Name=Stalk_strength;B73v2_pos=1:297860680;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304826460	304826559	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:297876837;1allele=G/A;version=Hapmap2;RS=rs128989799;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	304878728	304878827	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:297928755;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304896207	304896306	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:297948940;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	304953164	304953263	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:297990553;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305030398	305030497	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=1:298075156;1allele=C/T;version=Hapmap2;RS=rs131922727;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	305031346	305031445	.	+	.	Name=Tassel_length;B73v2_pos=1:298076104;1allele=A/G;version=Hapmap1;RS=rs131922757;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	305081061	305081160	.	+	.	Name=Tassel_length;B73v2_pos=1:298125905;1allele=G/A;version=Hapmap2;RS=rs131922797;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	305089573	305089672	.	+	.	Name=Cob_diameter;B73v2_pos=1:298134417;1allele=C/T;version=Hapmap2;RS=rs838315497;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	305123646	305123745	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298166783;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305251746	305251845	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298301422;1allele=A/C;version=Hapmap2;RS=rs818274605;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	305270956	305271055	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298320632;1allele=C/T;version=Hapmap2;RS=rs802681838;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	305283992	305284091	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298333668;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305287841	305287940	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298337517;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305291153	305291252	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298340829;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305295095	305295194	.	+	.	Name=Cob_diameter;B73v2_pos=1:298344771;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305344597	305344696	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298394274;1allele=T/A;version=Hapmap2;RS=rs727152464;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	305365392	305365491	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298415069;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305373365	305373464	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298423042;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305373500	305373599	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298423177;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305373579	305373678	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:298423256;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305382146	305382245	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298431823;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305385382	305385481	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298435059;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305388223	305388322	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298437900;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305388281	305388380	.	+	.	Name=Cob_diameter;B73v2_pos=1:298437958;1allele=T/C;version=Hapmap2;RS=rs276594373;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	305652029	305652128	.	+	.	Name=Stalk_strength;B73v2_pos=1:298687342;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305653579	305653678	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:298688892;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305653693	305653792	.	+	.	Name=Cob_diameter;B73v2_pos=1:298689006;1allele=G/A;version=Hapmap2;RS=rs131923531;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	305653693	305653792	.	+	.	Name=Ear_row_number;B73v2_pos=1:298689006;1allele=G/A;version=Hapmap2;RS=rs131923531;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	305682682	305682781	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298717997;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305704939	305705038	.	+	.	Name=Cob_diameter;B73v2_pos=1:298738106;1allele=A/T;version=Hapmap2;RS=rs802108379;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	305716880	305716979	.	+	.	Name=Ear_row_number;B73v2_pos=1:298750047;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305729625	305729724	.	+	.	Name=Cob_diameter;B73v2_pos=1:298762794;1allele=A/G;version=Hapmap2;RS=rs1060856463;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	305748998	305749097	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298773203;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305752878	305752977	.	+	.	Name=Ear_row_number;B73v2_pos=1:298777083;1allele=G/A;version=Hapmap1;RS=rs131923725;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	305762595	305762694	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:298786793;1allele=AA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305819713	305819812	.	+	.	Name=Leaf_width;B73v2_pos=1:298822471;1allele=G/T;version=Hapmap2;RS=rs802528145;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	305825217	305825316	.	+	.	Name=Leaf_width;B73v2_pos=1:298827975;1allele=A/G;version=Hapmap2;RS=rs812176814;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	305869870	305869969	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298881541;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305871243	305871342	.	+	.	Name=Cob_diameter;B73v2_pos=1:298880168;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305872625	305872724	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298878786;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305956591	305956690	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298959394;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305972179	305972278	.	+	.	Name=Stalk_strength;B73v2_pos=1:298974982;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305972652	305972751	.	+	.	Name=Cob_diameter;B73v2_pos=1:298975455;1allele=T/A;version=Hapmap2;RS=rs1062814057;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	305975936	305976035	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:298978742;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305977422	305977521	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:298980228;1allele=T/C;version=Hapmap2;RS=rs812158526;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	305980473	305980572	.	+	.	Name=Leaf_width;B73v2_pos=1:298983279;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	305985831	305985930	.	+	.	Name=Leaf_width;B73v2_pos=1:298988635;1allele=G/T;version=Hapmap2;RS=rs825604421;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	305986395	305986494	.	+	.	Name=Leaf_width;B73v2_pos=1:298989199;1allele=G/A;version=Hapmap2;RS=rs827888656;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	306093647	306093746	.	+	.	Name=Cob_diameter;B73v2_pos=1:299097604;1allele=G/C;version=Hapmap2;RS=rs1064770974;2ref_allele=G;3alt_allele=C
chr1	Wallace_2014	SNP	306124522	306124621	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:299128491;1allele=C/T;version=Hapmap2;RS=rs276595518;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	306146557	306146656	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:299157399;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306168228	306168327	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:299190886;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306177778	306177877	.	+	.	Name=Tassel_length;B73v2_pos=1:299200434;1allele=G/T;version=Hapmap2;RS=rs816480612;2ref_allele=T;3alt_allele=G
chr1	Wallace_2014	SNP	306179351	306179450	.	+	.	Name=Ear_row_number;B73v2_pos=1:299202007;1allele=C/A;version=Hapmap2;RS=rs276595685;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	306267083	306267182	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:299282481;1allele=A/C;version=Hapmap1;RS=rs128991121;2ref_allele=A;3alt_allele=C
chr1	Wallace_2014	SNP	306267134	306267233	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:299282532;1allele=C/T;version=Hapmap2;RS=rs131924422;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	306272877	306272976	.	+	.	Name=Tassel_length;B73v2_pos=1:299288225;1allele=T/G;version=Hapmap2;RS=rs724658351;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	306275781	306275880	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:299291129;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306339715	306339814	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:299333379;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306365212	306365311	.	+	.	Name=Leaf_width;B73v2_pos=1:299358882;1allele=C/T;version=Hapmap2;RS=rs724516819;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	306367320	306367419	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:299360990;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306386881	306386980	.	+	.	Name=Leaf_width;B73v2_pos=1:299392700;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306392974	306393073	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:299384271;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306396310	306396409	.	+	.	Name=Height_above_ear;B73v2_pos=1:299387606;1allele=G/A;version=Hapmap2;RS=rs276596157;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	306398554	306398653	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:299389850;1allele=T/C;version=Hapmap2;RS=rs724776171;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	306434832	306434931	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:299432659;1allele=A/G;version=Hapmap2;RS=rs1061494336;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	306459041	306459140	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:299456869;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306467354	306467453	.	+	.	Name=Tassel_length;B73v2_pos=1:299465173;1allele=A/C;version=Hapmap2;RS=rs276596613;2ref_allele=C;3alt_allele=A
chr1	Wallace_2014	SNP	306472366	306472465	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:299470185;1allele=C/G;version=Hapmap2;RS=rs131924647;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	306477712	306477811	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:299475531;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306477862	306477961	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:299475681;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306478129	306478228	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:299475946;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306495828	306495927	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:299493935;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306529442	306529541	.	+	.	Name=Leaf_length;B73v2_pos=1:299527562;1allele=A/G;version=Hapmap2;RS=rs128991622;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	306537994	306538093	.	+	.	Name=Tassel_length;B73v2_pos=1:299536116;1allele=C/T;version=Hapmap2;RS=rs276596725;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	306605934	306606033	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:299603624;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306606654	306606753	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:299604344;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	306649056	306649155	.	+	.	Name=Cob_diameter;B73v2_pos=1:299639280;1allele=A/G;version=Hapmap2;RS=rs128991890;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	306662147	306662246	.	+	.	Name=Ear_row_number;B73v2_pos=1:299652372;1allele=G/A;version=Hapmap2;RS=rs1062529443;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	306740721	306740820	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:299672646;1allele=T/C;version=Hapmap2;RS=rs128991990;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	307032467	307032566	.	+	.	Name=Tassel_length;B73v2_pos=1:299986705;1allele=G/A;version=Hapmap1;RS=rs128992910;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	307071221	307071320	.	+	.	Name=Ear_row_number;B73v2_pos=1:300037720;1allele=G/A;version=Hapmap2;RS=rs128993068;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	307168621	307168720	.	+	.	Name=Tassel_length;B73v2_pos=1:300126710;1allele=C/T;version=Hapmap2;RS=rs276597976;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	307171764	307171863	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:300129853;1allele=T/A;version=Hapmap2;RS=rs276598013;2ref_allele=T;3alt_allele=A
chr1	Wallace_2014	SNP	307288101	307288200	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:300245361;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	307288525	307288624	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:300245785;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	307295595	307295694	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:300267969;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	307492416	307492515	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:300445829;1allele=C/A;version=Hapmap1;RS=rs131925472;2ref_allele=C;3alt_allele=T
chr1	Wallace_2014	SNP	307574778	307574877	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:300526827;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	307607167	307607266	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:300559220;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	307607507	307607606	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:300559560;1allele=A/T;version=Hapmap2;RS=rs1063734405;2ref_allele=A;3alt_allele=T
chr1	Wallace_2014	SNP	307608325	307608424	.	+	.	Name=Tassel_length;B73v2_pos=1:300560378;1allele=C/T;version=Hapmap2;RS=rs128993760;2ref_allele=T;3alt_allele=C
chr1	Wallace_2014	SNP	307674696	307674795	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:300619718;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	307700985	307701084	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:300645869;1allele=G/A;version=Hapmap2;RS=rs276598933;2ref_allele=G;3alt_allele=A
chr1	Wallace_2014	SNP	307704999	307705098	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:300649883;1allele=G/T;version=Hapmap2;RS=rs1061559989;2ref_allele=G;3alt_allele=T
chr1	Wallace_2014	SNP	307814592	307814691	.	+	.	Name=Tassel_length;B73v2_pos=1:300785725;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr1	Wallace_2014	SNP	307880343	307880442	.	+	.	Name=Tassel_length;B73v2_pos=1:300851420;1allele=A/G;version=Hapmap2;RS=rs1060600129;2ref_allele=A;3alt_allele=G
chr1	Wallace_2014	SNP	308043424	308043523	.	+	.	Name=Tassel_length;B73v2_pos=1:301007080;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	25359	25458	.	+	.	Name=Nitrate;B73v2_pos=10:520162;1allele=G/A;version=Hapmap2;RS=rs816233219;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	238496	238595	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:151831889;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	298216	298315	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:56330482;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	374104	374203	.	+	.	Name=Leaf_length;B73v2_pos=10:870156;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	595028	595127	.	+	.	Name=Starch;B73v2_pos=10:1069353;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	834821	834920	.	+	.	Name=Stalk_strength;B73v2_pos=10:1332600;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	964955	965054	.	+	.	Name=Height_above_ear;B73v2_pos=10:22253161;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	1248056	1248155	.	+	.	Name=Sucrose;B73v2_pos=10:1717586;1allele=A/G;version=Hapmap2;RS=rs846926409;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	1267505	1267604	.	+	.	Name=Sucrose;B73v2_pos=10:1737035;1allele=+/-;version=Hapmap2;RS=rs823008514;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	1348070	1348169	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:198130518;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	1348070	1348169	.	+	.	Name=Ear_height;B73v2_pos=5:198130518;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	1353609	1353708	.	+	.	Name=Stalk_strength;B73v2_pos=10:1822463;1allele=G/A;version=Hapmap2;RS=rs826213267;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	1389482	1389581	.	+	.	Name=Starch;B73v2_pos=10:1859646;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	1413745	1413844	.	+	.	Name=Starch;B73v2_pos=10:1884031;1allele=/TTCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	1434689	1434788	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:1915058;1allele=C/T;version=Hapmap2;RS=rs820786461;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	1435202	1435301	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:1915571;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	1457779	1457878	.	+	.	Name=Stalk_strength;B73v2_pos=10:1924787;1allele=A/T;version=Hapmap2;RS=rs814442281;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	1466230	1466329	.	+	.	Name=Sucrose;B73v2_pos=10:1946739;1allele=A/G;version=Hapmap2;RS=rs131743311;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	1528968	1529067	.	+	.	Name=Sucrose;B73v2_pos=10:2011627;1allele=A/C;version=Hapmap2;RS=rs826359390;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	1554478	1554577	.	+	.	Name=Sucrose;B73v2_pos=10:2037137;1allele=C/G;version=Hapmap2;RS=rs814896768;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	1579443	1579542	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:2062102;1allele=G/A;version=Hapmap2;RS=rs836219141;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	1610548	1610647	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:2093213;1allele=G/A;version=Hapmap2;RS=rs812511824;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	1623897	1623996	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:2106562;1allele=T/C;version=Hapmap2;RS=rs828240022;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	1771327	1771426	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:2256224;1allele=G/A;version=Hapmap2;RS=rs848738434;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	2049786	2049885	.	+	.	Name=Malate;B73v2_pos=10:2507649;1allele=A/T;version=Hapmap2;RS=rs804288716;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	2074662	2074762	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:105415017;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2187906	2188005	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:94404456;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2201568	2201667	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:2657548;1allele=G/A;version=Hapmap2;RS=rs807774768;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	2222326	2222425	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:2678312;1allele=T/A;version=Hapmap1;RS=rs131744934;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	2224422	2224521	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:2680408;1allele=G/A;version=Hapmap2;RS=rs131744988;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	2224422	2224521	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:2680408;1allele=G/A;version=Hapmap2;RS=rs131744988;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	2228653	2228752	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:2684639;1allele=T/G;version=Hapmap2;RS=rs812978556;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	2232225	2232319	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:2688142;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2242541	2242640	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:182887240;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2310871	2310970	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:2766464;1allele=G/A;version=Hapmap2;RS=rs128295278;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	2327937	2328036	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:2794091;1allele=T/G;version=Hapmap2;RS=rs846549568;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	2328325	2328424	.	+	.	Name=Leaf_length;B73v2_pos=10:2794479;1allele=C/T;version=Hapmap2;RS=rs131745125;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	2387829	2387928	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:2835945;1allele=C/G;version=Hapmap2;RS=rs812564551;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	2413516	2413615	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:2863516;1allele=A/G;version=Hapmap2;RS=rs808367551;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	2426319	2426418	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:96745866;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2426319	2426418	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:96745866;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2525913	2526012	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:2989756;1allele=C/T;version=Hapmap2;RS=rs831994877;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	2526431	2526530	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:2990274;1allele=A/G;version=Hapmap2;RS=rs848861017;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	2557723	2557822	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:3020278;1allele=A/C;version=Hapmap2;RS=rs815348755;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	2562574	2562673	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:3025035;1allele=C/T;version=Hapmap2;RS=rs849241222;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	2597585	2597684	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:3058814;1allele=C/T;version=Hapmap2;RS=rs830874934;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	2599764	2599863	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:3060993;1allele=A/T;version=Hapmap2;RS=rs840790430;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	2600528	2600627	.	+	.	Name=Leaf_length;B73v2_pos=10:3061757;1allele=GGCC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2610187	2610286	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:3124228;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2610796	2610895	.	+	.	Name=Leaf_length;B73v2_pos=10:3123619;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	2640889	2640988	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:3090712;1allele=C/T;version=Hapmap2;RS=rs278854075;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	2643551	2643650	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:3093372;1allele=A/G;version=Hapmap2;RS=rs829807597;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	2713811	2713910	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:3168247;1allele=C/T;version=Hapmap2;RS=rs819997893;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	2715754	2715853	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:3170190;1allele=G/A;version=Hapmap2;RS=rs850146603;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	2724638	2724737	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:3179073;1allele=C/G;version=Hapmap2;RS=rs131745805;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	2789832	2789931	.	+	.	Name=Stalk_strength;B73v2_pos=9:26671931;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	3486872	3486971	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:3877991;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	3542546	3542645	.	+	.	Name=Leaf_length;B73v2_pos=10:3997021;1allele=T/C;version=Hapmap2;RS=rs128483017;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	3576474	3576573	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:4039806;1allele=G/A;version=Hapmap2;RS=rs128483203;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	3610608	3610707	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:4074002;1allele=G/C;version=Hapmap2;RS=rs808137746;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	3681994	3682081	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:4187989;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	3714239	3714338	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188428292;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	3735501	3735600	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:4098938;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	3789031	3789130	.	+	.	Name=Leaf_length;B73v2_pos=10:4243993;1allele=GAT/;version=Hapmap1;RS=rs131746590;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	3790402	3790501	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4245364;1allele=A/G;version=Hapmap2;RS=rs846267969;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	3790717	3790816	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:4245679;1allele=G/T;version=Hapmap2;RS=rs846696468;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	3827637	3827736	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:4303682;1allele=G/A;version=Hapmap2;RS=rs814773751;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	4043217	4043316	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:4505083;1allele=T/C;version=Hapmap2;RS=rs836318603;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	4062192	4062291	.	+	.	Name=Leaf_length;B73v2_pos=10:4526663;1allele=T/C;version=Hapmap2;RS=rs131746823;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	4092873	4092972	.	+	.	Name=Leaf_length;B73v2_pos=10:4558686;1allele=A/G;version=Hapmap1;RS=rs131746871;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	4097838	4097937	.	+	.	Name=Leaf_length;B73v2_pos=10:4563651;1allele=A/G;version=Hapmap2;RS=rs725080956;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	4116046	4116145	.	+	.	Name=Leaf_length;B73v2_pos=10:4583018;1allele=A/T;version=Hapmap2;RS=rs1063625609;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	4118143	4118242	.	+	.	Name=Leaf_length;B73v2_pos=10:4585115;1allele=G/A;version=Hapmap1;RS=rs131746908;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	4119077	4119176	.	+	.	Name=Leaf_length;B73v2_pos=10:4586049;1allele=T/C;version=Hapmap1;RS=rs131746938;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	4119204	4119303	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:4586176;1allele=A/G;version=Hapmap1;RS=rs131746942;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	4126389	4126487	.	+	.	Name=Leaf_length;B73v2_pos=10:4593354;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	4126715	4126814	.	+	.	Name=Leaf_length;B73v2_pos=10:4593681;1allele=C/T;version=Hapmap2;RS=rs131746969;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	4196405	4196504	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4663301;1allele=G/A;version=Hapmap2;RS=rs818345704;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	4331483	4331582	.	+	.	Name=Glucose;B73v2_pos=5:7666314;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	4351700	4351799	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4817918;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	4351700	4351799	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:4817918;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	4353443	4353542	.	+	.	Name=Height_above_ear;B73v2_pos=10:4819661;1allele=C/G;version=Hapmap1;RS=rs131747994;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	4401414	4401513	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4867794;1allele=C/A;version=Hapmap2;RS=rs804319878;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	4401913	4402012	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4868293;1allele=C/T;version=Hapmap2;RS=rs805471606;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	4437409	4437508	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4903785;1allele=C/T;version=Hapmap2;RS=rs278856707;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	4438328	4438427	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:4904704;1allele=T/C;version=Hapmap2;RS=rs850499900;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	4483457	4483556	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4950195;1allele=C/A;version=Hapmap2;RS=rs1060619246;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	4501902	4502001	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:170605546;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	4515337	4515436	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:4964767;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	4608603	4608702	.	+	.	Name=Tassel_length;B73v2_pos=10:4987709;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	4670996	4671095	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:5120738;1allele=T/C;version=Hapmap1;RS=rs812286733;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	4833829	4833928	.	+	.	Name=Days_to_silk;B73v2_pos=10:5277468;1allele=A/C;version=Hapmap2;RS=rs278856987;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	4969309	4969408	.	+	.	Name=Days_to_silk;B73v2_pos=10:5398299;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5004688	5004787	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:5434467;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5074658	5074757	.	+	.	Name=Tassel_length;B73v2_pos=10:5510002;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5078117	5078216	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:73475566;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5115325	5115424	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:5533308;1allele=G/A;version=Hapmap2;RS=rs128484943;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5142651	5142750	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:5560636;1allele=C/T;version=Hapmap2;RS=rs808895705;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5150262	5150361	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:5568248;1allele=G/A;version=Hapmap2;RS=rs803407847;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5161881	5161980	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:5583003;1allele=C/T;version=Hapmap2;RS=rs845335553;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5217131	5217230	.	+	.	Name=Tassel_length;B73v2_pos=10:5640775;1allele=C/T;version=Hapmap2;RS=rs828392369;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5217920	5218019	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:5641564;1allele=cnv;version=CNV_genic;RS=rs825177639;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5272937	5273036	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165897461;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5318480	5318579	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:5717462;1allele=C/T;version=Hapmap2;RS=rs814878307;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5318515	5318614	.	+	.	Name=Cob_diameter;B73v2_pos=10:5717497;1allele=T/C;version=Hapmap2;RS=rs849835281;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5323489	5323588	.	+	.	Name=Plant_height;B73v2_pos=10:5727361;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5331921	5332020	.	+	.	Name=Tassel_length;B73v2_pos=10:5718930;1allele=A/G;version=Hapmap2;RS=rs847000399;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5337896	5337995	.	+	.	Name=Tassel_length;B73v2_pos=10:5734735;1allele=C/G;version=Hapmap2;RS=rs1064781305;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	5340235	5340334	.	+	.	Name=Tassel_length;B73v2_pos=10:5737074;1allele=T/C;version=Hapmap2;RS=rs804531088;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5358509	5358608	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:5755348;1allele=T/G;version=Hapmap2;RS=rs128485040;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	5364933	5365032	.	+	.	Name=Tassel_length;B73v2_pos=10:5761772;1allele=T/C;version=Hapmap2;RS=rs833791773;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5439402	5439501	.	+	.	Name=Plant_height;B73v2_pos=10:5846207;1allele=G/A;version=Hapmap2;RS=rs1064079650;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	5439402	5439501	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:5846207;1allele=G/A;version=Hapmap2;RS=rs1064079650;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	5440463	5440562	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:5847268;1allele=T/C;version=Hapmap2;RS=rs844781463;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5440463	5440562	.	+	.	Name=Plant_height;B73v2_pos=10:5847268;1allele=T/C;version=Hapmap2;RS=rs844781463;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5440541	5440640	.	+	.	Name=Plant_height;B73v2_pos=10:5847346;1allele=C/T;version=Hapmap2;RS=rs804567544;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5440829	5440928	.	+	.	Name=Plant_height;B73v2_pos=10:5847634;1allele=C/T;version=Hapmap2;RS=rs814216816;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5442173	5442272	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:2141838;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5518702	5518801	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:5868186;1allele=C/G;version=Hapmap2;RS=rs278857777;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	5524815	5524914	.	+	.	Name=Starch;B73v2_pos=10:5874299;1allele=T/C;version=Hapmap2;RS=rs726091486;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5527472	5527571	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:5876956;1allele=G/A;version=Hapmap2;RS=rs841971474;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5527472	5527571	.	+	.	Name=Starch;B73v2_pos=10:5876956;1allele=G/A;version=Hapmap2;RS=rs841971474;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5547850	5547949	.	+	.	Name=Tassel_length;B73v2_pos=10:5895281;1allele=A/G;version=Hapmap1;RS=rs131749299;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	5553204	5553303	.	+	.	Name=Tassel_length;B73v2_pos=10:5900634;1allele=C/T;version=Hapmap2;RS=rs846394504;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5561355	5561454	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:5908785;1allele=G/A;version=Hapmap2;RS=rs278857990;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	5668052	5668151	.	+	.	Name=Tassel_length;B73v2_pos=10:6070105;1allele=/CCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5668054	5668153	.	+	.	Name=Tassel_length;B73v2_pos=10:6070107;1allele=G/C;version=Hapmap1;RS=rs131749554;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5669224	5669323	.	+	.	Name=Tassel_length;B73v2_pos=10:6071277;1allele=C/T;version=Hapmap2;RS=rs131749603;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5672335	5672434	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:6074388;1allele=T/C;version=Hapmap2;RS=rs128296416;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5677676	5677765	.	+	.	Name=Glucose;B73v2_pos=10:6093757;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5677974	5678073	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:6093449;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5738924	5739023	.	+	.	Name=Fructose;B73v2_pos=10:6128997;1allele=T/C;version=Hapmap2;RS=rs844514328;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5738924	5739023	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:6128997;1allele=T/C;version=Hapmap2;RS=rs844514328;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5746962	5747061	.	+	.	Name=Leaf_length;B73v2_pos=10:6137037;1allele=C/T;version=Hapmap2;RS=rs131749683;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5813891	5813990	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6206444;1allele=C/T;version=Hapmap2;RS=rs131749713;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5814516	5814615	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6207069;1allele=T/C;version=Hapmap2;RS=rs278858151;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5815030	5815129	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6207583;1allele=C/T;version=Hapmap2;RS=rs278858155;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5815269	5815368	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6207822;1allele=G/A;version=Hapmap2;RS=rs278858159;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	5815333	5815432	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6207886;1allele=G/A;version=Hapmap2;RS=rs278858161;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5815333	5815432	.	+	.	Name=Plant_height;B73v2_pos=10:6207886;1allele=G/A;version=Hapmap2;RS=rs278858161;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5815908	5816007	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6208461;1allele=C/A;version=Hapmap2;RS=rs131749715;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	5816373	5816472	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6208926;1allele=C/T;version=Hapmap2;RS=rs1061527218;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5816373	5816472	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6208926;1allele=C/T;version=Hapmap2;RS=rs1061527218;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5817051	5817150	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:6209608;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5817051	5817150	.	+	.	Name=Fructose;B73v2_pos=10:6209608;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5835931	5836030	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6229489;1allele=T/C;version=Hapmap2;RS=rs128296434;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5836140	5836239	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6229698;1allele=C/T;version=Hapmap2;RS=rs848109413;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5839418	5839517	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:6232977;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5840320	5840419	.	+	.	Name=Glucose;B73v2_pos=10:6233879;1allele=G/A;version=Hapmap2;RS=rs842040202;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	5848065	5848164	.	+	.	Name=Plant_height;B73v2_pos=10:6241626;1allele=C/T;version=Hapmap2;RS=rs128485456;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5848448	5848547	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6242009;1allele=G/C;version=Hapmap2;RS=rs824858832;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	5848563	5848662	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:6242124;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5877399	5877498	.	+	.	Name=Tassel_length;B73v2_pos=8:118646391;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	5952753	5952852	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:6349977;1allele=T/G;version=Hapmap2;RS=rs845756015;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	5952824	5952923	.	+	.	Name=Plant_height;B73v2_pos=10:6350048;1allele=T/G;version=Hapmap2;RS=rs842411140;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	5953041	5953140	.	+	.	Name=Leaf_length;B73v2_pos=10:6350265;1allele=C/T;version=Hapmap2;RS=rs817905819;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	5953536	5953635	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:6350760;1allele=T/A;version=Hapmap2;RS=rs825818474;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	5953687	5953786	.	+	.	Name=Plant_height;B73v2_pos=10:6350911;1allele=C/G;version=Hapmap2;RS=rs805745191;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	5955813	5955912	.	+	.	Name=Plant_height;B73v2_pos=10:6353037;1allele=G/T;version=Hapmap2;RS=rs820579730;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	5973642	5973741	.	+	.	Name=Glucose;B73v2_pos=10:6370953;1allele=T/C;version=Hapmap2;RS=rs818923522;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5975727	5975826	.	+	.	Name=Plant_height;B73v2_pos=10:6373038;1allele=C/G;version=Hapmap2;RS=rs131749841;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	5975727	5975826	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6373038;1allele=C/G;version=Hapmap2;RS=rs131749841;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	5976181	5976280	.	+	.	Name=Plant_height;B73v2_pos=10:6373492;1allele=T/A;version=Hapmap1;RS=rs131749851;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	5976181	5976280	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6373492;1allele=T/A;version=Hapmap1;RS=rs131749851;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	6008134	6008233	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:6399601;1allele=C/T;version=Hapmap2;RS=rs128485645;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	6008387	6008486	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:6399854;1allele=GT/;version=Hapmap1;RS=rs131750028;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	6008599	6008698	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6400066;1allele=C/T;version=Hapmap1;RS=rs131750043;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	6008835	6008934	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:6400302;1allele=G/A;version=Hapmap1;RS=rs131750052;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	6008843	6008942	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:6400310;1allele=/CTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6011327	6011426	.	+	.	Name=Plant_height;B73v2_pos=10:6402794;1allele=G/A;version=Hapmap1;RS=rs131750117;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	6011327	6011426	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6402794;1allele=G/A;version=Hapmap1;RS=rs131750117;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	6079941	6080040	.	+	.	Name=Glucose;B73v2_pos=10:6426629;1allele=C/T;version=Hapmap2;RS=rs818667748;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	6084801	6084900	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6431489;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6084801	6084900	.	+	.	Name=Plant_height;B73v2_pos=10:6431489;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6085966	6086065	.	+	.	Name=Days_to_silk;B73v2_pos=10:6432654;1allele=C/T;version=Hapmap2;RS=rs849051367;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	6114665	6114764	.	+	.	Name=Plant_height;B73v2_pos=10:6451293;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6114665	6114764	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6451293;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6114776	6114875	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:6451404;1allele=G/T;version=Hapmap2;RS=rs836157235;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	6142478	6142577	.	+	.	Name=Plant_height;B73v2_pos=10:6480618;1allele=T/C;version=Hapmap2;RS=rs278858432;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	6149404	6149503	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:6487401;1allele=G/A;version=Hapmap2;RS=rs812515610;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	6201521	6201620	.	+	.	Name=Days_to_silk;B73v2_pos=10:6537671;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6203343	6203442	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:6535849;1allele=G/A;version=Hapmap2;RS=rs811186399;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	6269891	6269990	.	+	.	Name=Fructose;B73v2_pos=10:6603713;1allele=A/G;version=Hapmap2;RS=rs848381209;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	6287929	6288028	.	+	.	Name=Fructose;B73v2_pos=10:6682997;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6290031	6290130	.	+	.	Name=Tassel_length;B73v2_pos=10:6685213;1allele=G/A;version=Hapmap2;RS=rs278858651;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	6359543	6359642	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:6680033;1allele=C/G;version=Hapmap2;RS=rs815195028;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	6643710	6643809	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178708904;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	6811269	6811368	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:7107081;1allele=G/C;version=Hapmap2;RS=rs131750629;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	6811934	6812033	.	+	.	Name=Ear_height;B73v2_pos=10:7107746;1allele=C/T;version=Hapmap2;RS=rs809840623;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	6812049	6812148	.	+	.	Name=Plant_height;B73v2_pos=10:7107861;1allele=A/T;version=Hapmap2;RS=rs278858958;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	6815482	6815581	.	+	.	Name=Ear_row_number;B73v2_pos=10:7111294;1allele=C/G;version=Hapmap2;RS=rs836691576;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	6826060	6826159	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:7121872;1allele=C/T;version=Hapmap1;RS=rs816987571;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	6981518	6981617	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155723658;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7200863	7200962	.	+	.	Name=Ear_height;B73v2_pos=10:7360215;1allele=C/T;version=Hapmap2;RS=rs831392010;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7276095	7276194	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:7470356;1allele=C/T;version=Hapmap1;RS=rs128486281;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7276184	7276283	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:7470445;1allele=T/G;version=Hapmap2;RS=rs278859213;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	7276309	7276408	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:7470570;1allele=C/T;version=Hapmap1;RS=rs726575056;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7276446	7276545	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:7470707;1allele=T/C;version=Hapmap2;RS=rs128486284;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7276446	7276545	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:7470707;1allele=T/C;version=Hapmap2;RS=rs128486284;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7276465	7276564	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:7470726;1allele=A/T;version=Hapmap2;RS=rs278859217;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	7276623	7276722	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:7470884;1allele=C/T;version=Hapmap2;RS=rs725566232;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	7368853	7368952	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:7561333;1allele=A/T;version=Hapmap2;RS=rs278859318;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	7372710	7372809	.	+	.	Name=Ear_height;B73v2_pos=10:7565190;1allele=T/A;version=Hapmap2;RS=rs810386592;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	7404670	7404769	.	+	.	Name=Leaf_length;B73v2_pos=10:7589445;1allele=C/A;version=Hapmap2;RS=rs278859403;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	7438244	7438343	.	+	.	Name=Leaf_length;B73v2_pos=10:7623026;1allele=C/T;version=Hapmap2;RS=rs128296637;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7448095	7448194	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:7637470;1allele=A/G;version=Hapmap2;RS=rs128486448;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	7450910	7451009	.	+	.	Name=Plant_height;B73v2_pos=10:7640285;1allele=A/G;version=Hapmap2;RS=rs278859455;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7450933	7451032	.	+	.	Name=Plant_height;B73v2_pos=10:7640308;1allele=G/A;version=Hapmap2;RS=rs128486468;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7451449	7451548	.	+	.	Name=Ear_height;B73v2_pos=10:7640824;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7451463	7451562	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:7640838;1allele=A/G;version=Hapmap2;RS=rs819738636;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7453800	7453899	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:7643175;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7453800	7453899	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:7643175;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7453800	7453899	.	+	.	Name=Plant_height;B73v2_pos=10:7643175;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7453800	7453899	.	+	.	Name=Ear_height;B73v2_pos=10:7643175;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7454237	7454336	.	+	.	Name=Ear_height;B73v2_pos=10:7643612;1allele=C/T;version=Hapmap2;RS=rs843863536;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7454991	7455090	.	+	.	Name=Ear_height;B73v2_pos=10:7644366;1allele=C/T;version=Hapmap2;RS=rs833285014;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7454991	7455090	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:7644366;1allele=C/T;version=Hapmap2;RS=rs833285014;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7454991	7455090	.	+	.	Name=Plant_height;B73v2_pos=10:7644366;1allele=C/T;version=Hapmap2;RS=rs833285014;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7454991	7455090	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:7644366;1allele=C/T;version=Hapmap2;RS=rs833285014;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7455400	7455499	.	+	.	Name=Plant_height;B73v2_pos=10:7644775;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7456495	7456594	.	+	.	Name=Plant_height;B73v2_pos=10:7645870;1allele=C/T;version=Hapmap2;RS=rs826096161;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	7456544	7456643	.	+	.	Name=Plant_height;B73v2_pos=10:7645919;1allele=A/G;version=Hapmap2;RS=rs844118826;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	7456976	7457075	.	+	.	Name=Plant_height;B73v2_pos=10:7646351;1allele=C/A;version=Hapmap2;RS=rs844591369;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	7457894	7457993	.	+	.	Name=Days_to_silk;B73v2_pos=10:7647269;1allele=C/T;version=Hapmap2;RS=rs278859495;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	7458072	7458171	.	+	.	Name=Plant_height;B73v2_pos=10:7647447;1allele=C/T;version=Hapmap2;RS=rs841682069;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7458507	7458606	.	+	.	Name=Ear_height;B73v2_pos=10:7647882;1allele=T/A;version=Hapmap2;RS=rs128486489;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	7458548	7458647	.	+	.	Name=Ear_height;B73v2_pos=10:7647923;1allele=T/C;version=Hapmap2;RS=rs278859498;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	7458561	7458660	.	+	.	Name=Ear_height;B73v2_pos=10:7647936;1allele=T/G;version=Hapmap2;RS=rs820182851;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	7458561	7458660	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:7647936;1allele=T/G;version=Hapmap2;RS=rs820182851;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	7462371	7462470	.	+	.	Name=Leaf_width;B73v2_pos=10:7651746;1allele=A/G;version=Hapmap2;RS=rs818198742;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7462425	7462524	.	+	.	Name=Leaf_width;B73v2_pos=10:7651800;1allele=C/T;version=Hapmap2;RS=rs833608498;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7472497	7472596	.	+	.	Name=Sucrose;B73v2_pos=10:7661871;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7481490	7481589	.	+	.	Name=Ear_height;B73v2_pos=10:7670793;1allele=A/G;version=Hapmap2;RS=rs803725773;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7506905	7507004	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:7701650;1allele=T/A;version=Hapmap2;RS=rs831941032;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	7555618	7555717	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:186987734;1allele=A/G;version=Hapmap2;RS=rs837891591;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7644455	7644554	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:7820817;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7748216	7748315	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:7924437;1allele=G/A;version=Hapmap2;RS=rs1061355490;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7776873	7776972	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:7953105;1allele=A/G;version=Hapmap2;RS=rs278859922;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	7777381	7777480	.	+	.	Name=Ear_height;B73v2_pos=10:7953613;1allele=C/A;version=Hapmap2;RS=rs804734790;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	7783212	7783311	.	+	.	Name=Ear_height;B73v2_pos=10:7959448;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	7879328	7879427	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:8055633;1allele=A/G;version=Hapmap2;RS=rs1060526263;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	7910324	7910423	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:8091619;1allele=T/C;version=Hapmap2;RS=rs830029325;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	7910324	7910423	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:8091619;1allele=T/C;version=Hapmap2;RS=rs830029325;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	8062746	8062845	.	+	.	Name=Glucose;B73v2_pos=10:8245718;1allele=A/G;version=Hapmap2;RS=rs816289216;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	8140698	8140797	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:6241920;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	8170331	8170430	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:8355333;1allele=T/C;version=Hapmap2;RS=rs128487032;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	8170331	8170430	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:8355333;1allele=T/C;version=Hapmap2;RS=rs128487032;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	8191165	8191264	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:8376168;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	8193520	8193619	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:8378523;1allele=T/C;version=Hapmap2;RS=rs828265817;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	8193551	8193650	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:8378554;1allele=G/A;version=Hapmap2;RS=rs807094986;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	8194741	8194840	.	+	.	Name=Ear_height;B73v2_pos=10:8379744;1allele=T/C;version=Hapmap2;RS=rs810770395;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	8221687	8221786	.	+	.	Name=Ear_height;B73v2_pos=10:8422907;1allele=C/T;version=Hapmap2;RS=rs819144055;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	8465273	8465372	.	+	.	Name=Ear_height;B73v2_pos=10:8642035;1allele=G/A;version=Hapmap2;RS=rs801991722;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	8595519	8595618	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:8784904;1allele=G/A;version=Hapmap2;RS=rs827127513;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	8602864	8602963	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:8792249;1allele=T/C;version=Hapmap1;RS=rs131751605;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	8603237	8603336	.	+	.	Name=Ear_height;B73v2_pos=10:8792622;1allele=C/T;version=Hapmap2;RS=rs131751610;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	8661267	8661366	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:8843404;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	8668301	8668400	.	+	.	Name=Ear_height;B73v2_pos=10:8850438;1allele=T/C;version=Hapmap1;RS=rs830152843;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	8670018	8670117	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:8852155;1allele=A/T;version=Hapmap2;RS=rs128487279;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	8732739	8732838	.	+	.	Name=Starch;B73v2_pos=7:21249090;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	8738175	8738274	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:8912582;1allele=C/T;version=Hapmap1;RS=rs131751779;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	8755643	8755742	.	+	.	Name=Ear_height;B73v2_pos=10:8932118;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	8756752	8756851	.	+	.	Name=Ear_height;B73v2_pos=10:8931009;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	8756794	8756893	.	+	.	Name=Plant_height;B73v2_pos=10:8930967;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	8781441	8781539	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162741793;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	9200682	9200781	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:9372560;1allele=C/T;version=Hapmap2;RS=rs128487667;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	9228877	9228976	.	+	.	Name=Fructose;B73v2_pos=10:9400759;1allele=C/A;version=Hapmap2;RS=rs801997564;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	9232045	9232144	.	+	.	Name=Fructose;B73v2_pos=10:9403927;1allele=T/C;version=Hapmap2;RS=rs278861807;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	9308452	9308551	.	+	.	Name=Fructose;B73v2_pos=10:9475146;1allele=C/G;version=Hapmap2;RS=rs847053643;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	9366974	9367073	.	+	.	Name=Ear_height;B73v2_pos=10:9536833;1allele=G/T;version=Hapmap2;RS=rs278862212;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	9369010	9369109	.	+	.	Name=Leaf_width;B73v2_pos=10:9538869;1allele=A/T;version=Hapmap2;RS=rs825462093;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	9415876	9415975	.	+	.	Name=Ear_height;B73v2_pos=10:9585269;1allele=T/C;version=Hapmap2;RS=rs849092698;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	9427893	9427992	.	+	.	Name=Days_to_silk;B73v2_pos=10:9597286;1allele=A/G;version=Hapmap2;RS=rs128488085;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	9428159	9428258	.	+	.	Name=Ear_height;B73v2_pos=10:9597552;1allele=T/G;version=Hapmap2;RS=rs278862341;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	9702892	9702991	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:9854532;1allele=C/T;version=Hapmap2;RS=rs826452942;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	9745266	9745365	.	+	.	Name=Days_to_silk;B73v2_pos=10:9897316;1allele=A/G;version=Hapmap2;RS=rs1062978993;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	9751862	9751961	.	+	.	Name=Days_to_silk;B73v2_pos=10:9903912;1allele=A/C;version=Hapmap2;RS=rs835954900;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	9752670	9752769	.	+	.	Name=Days_to_silk;B73v2_pos=10:9904720;1allele=A/G;version=Hapmap2;RS=rs820941790;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	9959757	9959856	.	+	.	Name=Leaf_length;B73v2_pos=6:4481492;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10022117	10022216	.	+	.	Name=Ear_height;B73v2_pos=10:10169065;1allele=A/G;version=Hapmap2;RS=rs831054454;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	10088922	10089021	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:10235946;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10122746	10122845	.	+	.	Name=Ear_height;B73v2_pos=10:10264650;1allele=C/T;version=Hapmap2;RS=rs818307105;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	10139887	10139986	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:10284599;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10215850	10215949	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:10360259;1allele=T/C;version=Hapmap2;RS=rs817628610;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	10236570	10236669	.	+	.	Name=Starch;B73v2_pos=10:10380980;1allele=A/G;version=Hapmap2;RS=rs834572813;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	10247766	10247865	.	+	.	Name=Sucrose;B73v2_pos=10:10392174;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10308580	10308679	.	+	.	Name=Ear_height;B73v2_pos=10:10446066;1allele=C/T;version=Hapmap2;RS=rs128488660;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	10331522	10331621	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158707973;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10337096	10337195	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:10474739;1allele=G/A;version=Hapmap1;RS=rs131753170;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	10381450	10381549	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:10547328;1allele=G/A;version=Hapmap2;RS=rs816873242;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	10393467	10393566	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:10559347;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10443477	10443575	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:210357946;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10461848	10461946	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:47199506;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10467901	10468000	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:10600997;1allele=T/G;version=Hapmap2;RS=rs819605064;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	10468534	10468633	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:10601630;1allele=T/C;version=Hapmap2;RS=rs836094968;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	10481612	10481711	.	+	.	Name=Ear_height;B73v2_pos=10:10614708;1allele=A/G;version=Hapmap1;RS=rs131753361;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	10515891	10515990	.	+	.	Name=Ear_height;B73v2_pos=10:10643137;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10568242	10568341	.	+	.	Name=Ear_height;B73v2_pos=9:116036054;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10600260	10600359	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:10732114;1allele=G/T;version=Hapmap2;RS=rs809404350;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	10656032	10656131	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:10788092;1allele=T/C;version=Hapmap2;RS=rs813987425;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	10664380	10664479	.	+	.	Name=Plant_height;B73v2_pos=10:10796442;1allele=T/C;version=Hapmap2;RS=rs128489243;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	10665190	10665289	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:10797252;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10712972	10713071	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:89101093;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10733937	10734036	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:153513298;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10759824	10759923	.	+	.	Name=Protein;B73v2_pos=10:10890917;1allele=G/A;version=Hapmap1;RS=rs131753713;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	10777294	10777393	.	+	.	Name=Sucrose;B73v2_pos=6:160747934;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	10950413	10950512	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:11076971;1allele=G/A;version=Hapmap2;RS=rs808184328;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	11048608	11048707	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:11176473;1allele=T/A;version=Hapmap2;RS=rs841178167;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	11062100	11062199	.	+	.	Name=Ear_height;B73v2_pos=10:11189906;1allele=A/G;version=Hapmap2;RS=rs869432012;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	11070943	11071042	.	+	.	Name=Ear_height;B73v2_pos=10:11198749;1allele=A/G;version=Hapmap2;RS=rs819751962;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	11109634	11109733	.	+	.	Name=Ear_height;B73v2_pos=10:11237471;1allele=C/A;version=Hapmap2;RS=rs813396301;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	11162181	11162280	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:11294574;1allele=T/G;version=Hapmap2;RS=rs820877693;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	11175620	11175719	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:11302116;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	11175620	11175719	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:11302116;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	11291687	11291786	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:220773378;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	11323166	11323265	.	+	.	Name=Leaf_length;B73v2_pos=10:11405909;1allele=C/T;version=Hapmap2;RS=rs834298133;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	11414597	11414696	.	+	.	Name=Nitrate;B73v2_pos=4:153958587;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	11558277	11558376	.	+	.	Name=Fructose;B73v2_pos=10:11614148;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	11558605	11558704	.	+	.	Name=Fructose;B73v2_pos=10:11613820;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	11722249	11722348	.	+	.	Name=Days_to_silk;B73v2_pos=10:11801450;1allele=T/G;version=Hapmap2;RS=rs838701799;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	11806820	11806919	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:11911287;1allele=A/G;version=Hapmap2;RS=rs802687123;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	11818840	11818939	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:11915378;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	11835247	11835346	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:11931789;1allele=A/G;version=Hapmap2;RS=rs836301369;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	11886153	11886252	.	+	.	Name=Glucose;B73v2_pos=10:11968236;1allele=T/C;version=Hapmap2;RS=rs801885900;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	11892968	11893067	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:11988081;1allele=A/G;version=Hapmap2;RS=rs840038215;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	11918543	11918642	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:12018742;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	12000028	12000127	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:12084414;1allele=T/C;version=Hapmap2;RS=rs128490371;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	12001459	12001558	.	+	.	Name=Leaf_width;B73v2_pos=10:12085845;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	12081780	12081879	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:12166169;1allele=G/A;version=Hapmap2;RS=rs128490496;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	12084781	12084880	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:12169170;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	12152448	12152547	.	+	.	Name=Plant_height;B73v2_pos=10:12211418;1allele=T/C;version=Hapmap2;RS=rs813071862;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	12229094	12229193	.	+	.	Name=Protein;B73v2_pos=10:12308019;1allele=C/A;version=Hapmap2;RS=rs128490723;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	12277212	12277311	.	+	.	Name=Cob_diameter;B73v2_pos=10:12352515;1allele=T/G;version=Hapmap1;RS=rs128490772;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	12287831	12287930	.	+	.	Name=Protein;B73v2_pos=10:12363220;1allele=G/A;version=Hapmap2;RS=rs843053778;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	12455291	12455390	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:12526676;1allele=G/T;version=Hapmap2;RS=rs835222104;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	12456775	12456874	.	+	.	Name=Height_above_ear;B73v2_pos=10:12528160;1allele=C/T;version=Hapmap2;RS=rs278864308;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	12457960	12458059	.	+	.	Name=Height_above_ear;B73v2_pos=10:12529345;1allele=A/G;version=Hapmap2;RS=rs278864313;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	12459025	12459124	.	+	.	Name=Height_above_ear;B73v2_pos=10:12530410;1allele=G/A;version=Hapmap2;RS=rs724417533;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	12459046	12459145	.	+	.	Name=Height_above_ear;B73v2_pos=10:12530431;1allele=A/T;version=Hapmap2;RS=rs849684429;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	12470168	12470267	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:12865615;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	12498770	12498869	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:12561790;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	12498770	12498869	.	+	.	Name=Plant_height;B73v2_pos=10:12561790;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	12498773	12498872	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:12561787;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	12538692	12538791	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:12594707;1allele=T/C;version=Hapmap2;RS=rs813145935;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	12688141	12688240	.	+	.	Name=Starch;B73v2_pos=10:12744644;1allele=T/G;version=Hapmap2;RS=rs128298243;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	12691305	12691404	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:12747808;1allele=C/T;version=Hapmap2;RS=rs278864461;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	12710089	12710188	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:12766592;1allele=A/G;version=Hapmap2;RS=rs834991718;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	12862366	12862465	.	+	.	Name=Days_to_silk;B73v2_pos=10:12922915;1allele=T/C;version=Hapmap2;RS=rs805514548;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	12867249	12867348	.	+	.	Name=Protein;B73v2_pos=10:12927798;1allele=G/T;version=Hapmap2;RS=rs131754884;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	12899479	12899578	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:12960963;1allele=C/T;version=Hapmap2;RS=rs824001419;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	12909468	12909567	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:12972398;1allele=G/T;version=Hapmap2;RS=rs815509776;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	12918971	12919070	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:12981901;1allele=C/T;version=Hapmap2;RS=rs837259619;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	13091910	13092009	.	+	.	Name=Leaf_width;B73v2_pos=10:13142823;1allele=G/A;version=Hapmap2;RS=rs848553134;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	13106649	13106748	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:13157561;1allele=T/C;version=Hapmap2;RS=rs824667002;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	13121629	13121728	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:13173324;1allele=C/G;version=Hapmap2;RS=rs838758766;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	13140463	13140562	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:13192299;1allele=G/T;version=Hapmap2;RS=rs278864854;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	13184672	13184771	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:13238700;1allele=A/G;version=Hapmap2;RS=rs817504557;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	13321415	13321514	.	+	.	Name=Ear_height;B73v2_pos=10:13360886;1allele=G/A;version=Hapmap2;RS=rs830488107;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	13400805	13400904	.	+	.	Name=Stalk_strength;B73v2_pos=10:13456264;1allele=A/G;version=Hapmap2;RS=rs807180457;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	13438747	13438846	.	+	.	Name=Fructose;B73v2_pos=10:13492484;1allele=C/T;version=Hapmap2;RS=rs833394636;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	13439518	13439617	.	+	.	Name=Fructose;B73v2_pos=10:13493255;1allele=C/T;version=Hapmap2;RS=rs128492022;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	13443238	13443337	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:13496975;1allele=A/G;version=Hapmap2;RS=rs813248871;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	13443351	13443450	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:13497088;1allele=A/C;version=Hapmap2;RS=rs827974685;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	13445819	13445918	.	+	.	Name=Glucose;B73v2_pos=10:13499556;1allele=T/A;version=Hapmap2;RS=rs846639307;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	13531880	13531979	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:13585502;1allele=C/T;version=Hapmap2;RS=rs813754737;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	13674594	13674693	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:13788515;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	13693229	13693328	.	+	.	Name=Glucose;B73v2_pos=9:31992706;1allele=G/A;version=Hapmap2;RS=rs827894384;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	13731771	13731870	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:13708894;1allele=A/G;version=Hapmap2;RS=rs812190169;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	13759339	13759438	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:13809731;1allele=T/C;version=Hapmap2;RS=rs847388713;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	13777469	13777568	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:13827860;1allele=C/A;version=Hapmap2;RS=rs826665904;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	13809235	13809334	.	+	.	Name=Days_to_silk;B73v2_pos=5:209279548;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	13831842	13831941	.	+	.	Name=Glucose;B73v2_pos=10:13881403;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	13880609	13880708	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:13930176;1allele=C/T;version=Hapmap2;RS=rs807768622;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	13953644	13953743	.	+	.	Name=Cob_diameter;B73v2_pos=10:14002477;1allele=G/C;version=Hapmap1;RS=rs131755563;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	14050071	14050170	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:14108402;1allele=C/A;version=Hapmap2;RS=rs836896711;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	14154910	14155009	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:14212621;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	14246641	14246740	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:14302915;1allele=C/T;version=Hapmap2;RS=rs811473686;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	14310080	14310179	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:14364666;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	14318104	14318203	.	+	.	Name=Cob_diameter;B73v2_pos=10:74363448;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	14362451	14362550	.	+	.	Name=Cob_diameter;B73v2_pos=10:14392037;1allele=G/A;version=Hapmap2;RS=rs833366046;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	14362885	14362984	.	+	.	Name=Tassel_length;B73v2_pos=10:14392472;1allele=G/A;version=Hapmap2;RS=rs832597504;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	14449461	14449560	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:14496855;1allele=A/C;version=Hapmap2;RS=rs803456742;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	14449682	14449781	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:14497076;1allele=C/A;version=Hapmap2;RS=rs131755787;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	14456814	14456913	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:14504445;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	14460439	14460538	.	+	.	Name=Leaf_width;B73v2_pos=5:28330898;1allele=G/A;version=Hapmap2;RS=rs824889298;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	14473650	14473749	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:14521287;1allele=A/G;version=Hapmap2;RS=rs813298284;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	14474231	14474330	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:14521868;1allele=A/G;version=Hapmap2;RS=rs1062465921;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	14475369	14475468	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:14523006;1allele=C/A;version=Hapmap2;RS=rs817015912;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	14503907	14504006	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:14551549;1allele=C/T;version=Hapmap2;RS=rs822591194;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	14585296	14585395	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:14635502;1allele=C/T;version=Hapmap2;RS=rs278865988;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	14592407	14592506	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:14642613;1allele=A/G;version=Hapmap2;RS=rs278866038;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	14594390	14594489	.	+	.	Name=Tassel_length;B73v2_pos=10:14644596;1allele=G/A;version=Hapmap2;RS=rs725261382;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	14601892	14601991	.	+	.	Name=Fructose;B73v2_pos=9:2849501;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	14602323	14602422	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:14652347;1allele=-/+;version=Hapmap2;RS=rs838983267;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	14776760	14776859	.	+	.	Name=Protein;B73v2_pos=10:14823348;1allele=A/T;version=Hapmap2;RS=rs848662006;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	14790606	14790705	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:14837196;1allele=C/T;version=Hapmap2;RS=rs827323931;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	14807403	14807502	.	+	.	Name=Total_amino_acids;B73v2_pos=10:14853992;1allele=C/G;version=Hapmap2;RS=rs278866464;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	14880883	14880982	.	+	.	Name=Tassel_length;B73v2_pos=10:14714437;1allele=T/C;version=Hapmap2;RS=rs829872441;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	14893323	14893422	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:14726878;1allele=A/G;version=Hapmap2;RS=rs128493433;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	14893636	14893735	.	+	.	Name=Leaf_length;B73v2_pos=10:14727191;1allele=C/T;version=Hapmap2;RS=rs837002740;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	14896914	14897013	.	+	.	Name=Tassel_length;B73v2_pos=10:14730469;1allele=T/C;version=Hapmap2;RS=rs278866239;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	14979139	14979238	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:14881388;1allele=A/G;version=Hapmap2;RS=rs832254058;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	14980951	14981050	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:14883201;1allele=C/A;version=Hapmap2;RS=rs823391249;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	15002186	15002285	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:14904811;1allele=T/C;version=Hapmap2;RS=rs806776005;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	15003668	15003767	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:14906293;1allele=T/C;version=Hapmap2;RS=rs826240247;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	15003684	15003783	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:14906309;1allele=C/A;version=Hapmap2;RS=rs131756095;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	15096542	15096641	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:14997713;1allele=A/G;version=Hapmap2;RS=rs835165348;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	15440313	15440412	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:15343276;1allele=T/G;version=Hapmap2;RS=rs832714553;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	15447733	15447832	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:15350696;1allele=A/G;version=Hapmap2;RS=rs802410176;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	15488714	15488813	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:15396910;1allele=T/C;version=Hapmap2;RS=rs809889617;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	15497883	15497982	.	+	.	Name=Total_amino_acids;B73v2_pos=10:15406080;1allele=G/A;version=Hapmap2;RS=rs825848832;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	15831852	15831951	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65687334;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	15875223	15875322	.	+	.	Name=Tassel_length;B73v2_pos=10:15828335;1allele=C/A;version=Hapmap2;RS=rs807203151;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	16031505	16031604	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:16063295;1allele=C/A;version=Hapmap2;RS=rs810304734;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	16093646	16093745	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:50361507;1allele=G/A;version=Hapmap2;RS=rs803644988;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	16167339	16167438	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:16207120;1allele=A/T;version=Hapmap2;RS=rs131756734;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	16173436	16173535	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:16213217;1allele=T/A;version=Hapmap2;RS=rs813034764;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	16179643	16179742	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:16219424;1allele=G/C;version=Hapmap2;RS=rs832760204;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	16276623	16276722	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:16306655;1allele=T/A;version=Hapmap2;RS=rs806353490;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	16276774	16276873	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:16306806;1allele=G/T;version=Hapmap2;RS=rs838173149;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	16343461	16343560	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:16373292;1allele=T/C;version=Hapmap2;RS=rs814773772;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	16466202	16466301	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:124305010;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	16487785	16487884	.	+	.	Name=Starch;B73v2_pos=10:16514765;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	17627209	17627308	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95525878;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	17655694	17655793	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162934229;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	17692341	17692440	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:17682869;1allele=T/C;version=Hapmap2;RS=rs803544512;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	18031119	18031218	.	+	.	Name=Stalk_strength;B73v2_pos=9:22663668;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	18203134	18203233	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:135900069;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	18442725	18442824	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:18397466;1allele=G/A;version=Hapmap2;RS=rs812140055;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	18443085	18443184	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:18397826;1allele=G/T;version=Hapmap1;RS=rs802512452;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	18453038	18453137	.	+	.	Name=Plant_height;B73v2_pos=10:18407779;1allele=A/G;version=Hapmap2;RS=rs278868448;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	18531986	18532085	.	+	.	Name=Plant_height;B73v2_pos=10:18477306;1allele=T/G;version=Hapmap2;RS=rs1061498985;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	18572741	18572840	.	+	.	Name=Height_above_ear;B73v2_pos=10:18516067;1allele=A/C;version=Hapmap2;RS=rs128497035;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	18573004	18573103	.	+	.	Name=Height_above_ear;B73v2_pos=10:18516330;1allele=A/G;version=Hapmap2;RS=rs278868495;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	18747305	18747404	.	+	.	Name=Height_above_ear;B73v2_pos=10:18658714;1allele=T/A;version=Hapmap2;RS=rs278868627;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	18747507	18747606	.	+	.	Name=Height_above_ear;B73v2_pos=10:18658916;1allele=A/T;version=Hapmap2;RS=rs128300435;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	18753275	18753374	.	+	.	Name=Height_above_ear;B73v2_pos=10:18664684;1allele=A/G;version=Hapmap2;RS=rs128497171;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	18754602	18754701	.	+	.	Name=Height_above_ear;B73v2_pos=10:18666011;1allele=A/G;version=Hapmap2;RS=rs278868633;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	18760462	18760561	.	+	.	Name=Height_above_ear;B73v2_pos=10:18671872;1allele=A/G;version=Hapmap2;RS=rs128300469;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	18763052	18763151	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:18674463;1allele=C/T;version=Hapmap2;RS=rs128497225;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	18830864	18830963	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:18741597;1allele=A/G;version=Hapmap2;RS=rs801704361;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	18844000	18844099	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:18754734;1allele=T/C;version=Hapmap2;RS=rs278868829;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	18847742	18847841	.	+	.	Name=Height_above_ear;B73v2_pos=10:18786946;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	18957169	18957268	.	+	.	Name=Height_above_ear;B73v2_pos=10:18860780;1allele=A/G;version=Hapmap2;RS=rs128497820;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	18960223	18960322	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:18863838;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	19012167	19012266	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:18916034;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	19232755	19232854	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:19033293;1allele=T/G;version=Hapmap2;RS=rs128498114;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	19272162	19272261	.	+	.	Name=Glucose;B73v2_pos=10:19071928;1allele=T/C;version=Hapmap2;RS=rs834213515;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	19316723	19316822	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:19115094;1allele=C/T;version=Hapmap1;RS=rs131757761;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	19386010	19386109	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11681659;1allele=A/T;version=Hapmap2;RS=rs845969476;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	19408228	19408327	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:19206491;1allele=C/T;version=Hapmap2;RS=rs845727263;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	19559592	19559691	.	+	.	Name=Total_amino_acids;B73v2_pos=10:19357436;1allele=C/T;version=Hapmap2;RS=rs815219450;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	19722272	19722371	.	+	.	Name=Starch;B73v2_pos=10:19518707;1allele=G/A;version=Hapmap2;RS=rs128498822;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	19722750	19722849	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:19519185;1allele=A/G;version=Hapmap2;RS=rs830137433;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	19723084	19723183	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:19519519;1allele=C/A;version=Hapmap2;RS=rs128498829;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	19768631	19768730	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:19565067;1allele=C/T;version=Hapmap2;RS=rs839632463;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	19782170	19782269	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:19578613;1allele=T/C;version=Hapmap2;RS=rs824429625;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	19828159	19828258	.	+	.	Name=Plant_height;B73v2_pos=4:202464330;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	19882654	19882753	.	+	.	Name=Leaf_length;B73v2_pos=10:19677554;1allele=C/G;version=Hapmap1;RS=rs131758196;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	19966478	19966577	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:19766885;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	19982010	19982109	.	+	.	Name=Starch;B73v2_pos=10:19774395;1allele=T/C;version=Hapmap2;RS=rs1061621526;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	20447915	20448014	.	+	.	Name=Days_to_silk;B73v2_pos=10:20222028;1allele=C/T;version=Hapmap2;RS=rs725053000;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	20470196	20470295	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:20243274;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	20480603	20480702	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:20253681;1allele=C/T;version=Hapmap2;RS=rs821010574;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	20567027	20567126	.	+	.	Name=Days_to_silk;B73v2_pos=8:121537472;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	20567027	20567126	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:121537472;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	20567027	20567126	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:121537472;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	20577919	20578018	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:152109974;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	20855486	20855585	.	+	.	Name=Leaf_length;B73v2_pos=10:20650316;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	20935901	20936000	.	+	.	Name=Leaf_length;B73v2_pos=10:20717954;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	20948983	20949082	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:20689257;1allele=G/A;version=Hapmap2;RS=rs847543732;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	20951592	20951691	.	+	.	Name=Leaf_length;B73v2_pos=10:20691866;1allele=C/T;version=Hapmap2;RS=rs821180480;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	20957367	20957466	.	+	.	Name=Leaf_length;B73v2_pos=10:20697641;1allele=T/C;version=Hapmap2;RS=rs278870935;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	21048349	21048448	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:20764224;1allele=C/G;version=Hapmap2;RS=rs847721518;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	21048349	21048448	.	+	.	Name=Starch;B73v2_pos=10:20764224;1allele=C/G;version=Hapmap2;RS=rs847721518;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	21111417	21111516	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:20827281;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	21265837	21265936	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:20986584;1allele=A/G;version=Hapmap2;RS=rs812658451;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	21359846	21359945	.	+	.	Name=Glucose;B73v2_pos=10:21080505;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	21649085	21649184	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:279963304;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	21700523	21700622	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187312160;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	21700525	21700624	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:187312158;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	21748500	21748599	.	+	.	Name=Cob_diameter;B73v2_pos=5:208515338;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	22055534	22055633	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:21820693;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	22055715	22055814	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:21820512;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	22248061	22248160	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:21960257;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	22366153	22366252	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:22084097;1allele=A/G;version=Hapmap2;RS=rs824606825;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	22415798	22415897	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:22122007;1allele=C/G;version=Hapmap2;RS=rs847345772;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	22445532	22445631	.	+	.	Name=Starch;B73v2_pos=10:22150271;1allele=T/G;version=Hapmap2;RS=rs804300152;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	22466047	22466146	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:22171778;1allele=G/A;version=Hapmap2;RS=rs820092832;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	22487886	22487985	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:22194577;1allele=-/+;version=Hapmap2;RS=rs278872520;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	22621678	22621777	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:22320918;1allele=G/C;version=Hapmap2;RS=rs128503569;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	22621678	22621777	.	+	.	Name=Glucose;B73v2_pos=10:22320918;1allele=G/C;version=Hapmap2;RS=rs128503569;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	22637995	22638093	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:22416019;1allele=C/T;version=Hapmap2;RS=rs846412486;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	22684773	22684872	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:24466854;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	22696595	22696694	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:22360756;1allele=T/A;version=Hapmap2;RS=rs128503721;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	22700613	22700712	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:22364774;1allele=A/G;version=Hapmap2;RS=rs839082667;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	22745179	22745278	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:22508621;1allele=C/T;version=Hapmap2;RS=rs829220365;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	22803903	22804002	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:22567381;1allele=G/A;version=Hapmap1;RS=rs131759124;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	23186777	23186876	.	+	.	Name=Leaf_length;B73v2_pos=10:22945384;1allele=G/A;version=Hapmap2;RS=rs837083712;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	23214481	23214580	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:22918150;1allele=G/A;version=Hapmap2;RS=rs804160107;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	23360479	23360578	.	+	.	Name=Tassel_length;B73v2_pos=1:30354412;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	23419383	23419482	.	+	.	Name=Days_to_silk;B73v2_pos=10:23144460;1allele=A/G;version=Hapmap2;RS=rs830369982;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	23424234	23424333	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:23149311;1allele=A/G;version=Hapmap2;RS=rs1064489669;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	23509018	23509117	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:23230598;1allele=A/T;version=Hapmap2;RS=rs810125339;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	23545989	23546088	.	+	.	Name=Nitrate;B73v2_pos=4:162849793;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	23626339	23626438	.	+	.	Name=Starch;B73v2_pos=10:23361110;1allele=G/T;version=Hapmap2;RS=rs833039642;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	23811171	23811270	.	+	.	Name=Ear_row_number;B73v2_pos=10:23546680;1allele=C/T;version=Hapmap2;RS=rs844920636;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	24123447	24123546	.	+	.	Name=Total_amino_acids;B73v2_pos=10:23880535;1allele=T/G;version=Hapmap2;RS=rs840473006;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	24367203	24367302	.	+	.	Name=Plant_height;B73v2_pos=10:24042534;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	24397551	24397650	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:46275065;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	24571272	24571371	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:24246193;1allele=C/T;version=Hapmap2;RS=rs802117196;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	24583451	24583550	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:71654129;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	24594085	24594184	.	+	.	Name=Leaf_length;B73v2_pos=6:8465555;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	24633116	24633215	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:24308044;1allele=G/A;version=Hapmap2;RS=rs727030053;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	24637855	24637954	.	+	.	Name=Starch;B73v2_pos=10:24312783;1allele=G/A;version=Hapmap2;RS=rs815736092;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	24662257	24662356	.	+	.	Name=Starch;B73v2_pos=10:24337186;1allele=A/G;version=Hapmap2;RS=rs836856189;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	24946729	24946828	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:24600431;1allele=C/G;version=Hapmap2;RS=rs847347165;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	24946729	24946828	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:24600431;1allele=C/G;version=Hapmap2;RS=rs847347165;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	24950688	24950787	.	+	.	Name=Ear_height;B73v2_pos=10:24604391;1allele=T/G;version=Hapmap2;RS=rs830271629;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	24962078	24962177	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:24615781;1allele=A/T;version=Hapmap2;RS=rs726533654;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	25040788	25040887	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:224804853;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	25081633	25081732	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:24735271;1allele=A/G;version=Hapmap2;RS=rs727325188;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	25548244	25548343	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:25206510;1allele=C/T;version=Hapmap2;RS=rs818939993;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	25559642	25559741	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:25217956;1allele=A/G;version=Hapmap2;RS=rs835506067;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	25576402	25576501	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:25256921;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	25612340	25612439	.	+	.	Name=Glucose;B73v2_pos=10:25250860;1allele=C/T;version=Hapmap2;RS=rs832474105;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	25632835	25632934	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:25282328;1allele=C/T;version=Hapmap2;RS=rs826934898;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	25652187	25652286	.	+	.	Name=Glucose;B73v2_pos=10:25301687;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	25654248	25654347	.	+	.	Name=Total_amino_acids;B73v2_pos=10:25303748;1allele=C/A;version=Hapmap2;RS=rs727338702;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	25792122	25792223	.	+	.	Name=Glucose;B73v2_pos=10:25326977;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	25975878	25975977	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:25625257;1allele=T/C;version=Hapmap2;RS=rs815204086;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	26129843	26129942	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:25778394;1allele=C/T;version=Hapmap2;RS=rs838447995;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	26129845	26129944	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:25778396;1allele=A/C;version=Hapmap2;RS=rs842463160;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	26431104	26431203	.	+	.	Name=Plant_height;B73v2_pos=10:26086547;1allele=C/T;version=Hapmap2;RS=rs837323418;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	26470948	26471047	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:26121484;1allele=C/T;version=Hapmap2;RS=rs839467245;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	26619019	26619118	.	+	.	Name=Glucose;B73v2_pos=10:26266942;1allele=C/T;version=Hapmap2;RS=rs846887624;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	26619908	26620007	.	+	.	Name=Glucose;B73v2_pos=10:26267831;1allele=C/A;version=Hapmap2;RS=rs805254361;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	26620274	26620373	.	+	.	Name=Glucose;B73v2_pos=10:26268197;1allele=T/A;version=Hapmap2;RS=rs803999101;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	26714547	26714646	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:144583330;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	26934601	26934700	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:26531867;1allele=A/G;version=Hapmap2;RS=rs835055074;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	27565237	27565336	.	+	.	Name=Stalk_strength;B73v2_pos=2:21143787;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	27614239	27614338	.	+	.	Name=Total_amino_acids;B73v2_pos=10:27140818;1allele=A/T;version=Hapmap2;RS=rs815341243;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	28128903	28129002	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:27645545;1allele=T/A;version=Hapmap2;RS=rs1063192149;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	28226253	28226352	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:27742240;1allele=G/A;version=Hapmap1;RS=rs131761016;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	28278917	28279016	.	+	.	Name=Starch;B73v2_pos=10:27790106;1allele=C/T;version=Hapmap2;RS=rs838521705;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	28292378	28292477	.	+	.	Name=Total_amino_acids;B73v2_pos=10:27841333;1allele=G/A;version=Hapmap2;RS=rs128510567;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	28362059	28362158	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:27917237;1allele=A/G;version=Hapmap2;RS=rs848692677;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	28683801	28683900	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:28226226;1allele=G/A;version=Hapmap2;RS=rs814640679;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	28766959	28767058	.	+	.	Name=Cob_diameter;B73v2_pos=10:28307567;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	28830110	28830209	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:85595017;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	28968551	28968650	.	+	.	Name=Ear_row_number;B73v2_pos=10:28508286;1allele=C/T;version=Hapmap2;RS=rs833167496;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	29028917	29029016	.	+	.	Name=Ear_row_number;B73v2_pos=10:28568654;1allele=A/G;version=Hapmap2;RS=rs826399291;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	29067631	29067730	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65872344;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	29088564	29088663	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:28636212;1allele=A/T;version=Hapmap2;RS=rs801532440;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	29123696	29123795	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:28670500;1allele=C/T;version=Hapmap2;RS=rs128511717;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	29134066	29134165	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:28681114;1allele=G/A;version=Hapmap2;RS=rs833861289;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	29221064	29221163	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:28782051;1allele=T/C;version=Hapmap2;RS=rs847374681;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	29230497	29230596	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:28791593;1allele=G/T;version=Hapmap2;RS=rs128511960;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	29266960	29267059	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:28868269;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	29268541	29268640	.	+	.	Name=Ear_row_number;B73v2_pos=10:28866688;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	29292842	29292941	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:28842381;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	29443375	29443474	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:28999599;1allele=G/T;version=Hapmap2;RS=rs822258728;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	29516454	29516553	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:29068440;1allele=G/A;version=Hapmap2;RS=rs807789803;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	29594413	29594512	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:29145956;1allele=C/T;version=Hapmap2;RS=rs845851356;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	29594961	29595060	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:29146504;1allele=T/A;version=Hapmap2;RS=rs804127562;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	29594968	29595067	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:29146511;1allele=A/G;version=Hapmap2;RS=rs841873017;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	29605383	29605482	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:29156926;1allele=A/G;version=Hapmap2;RS=rs823904789;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	29664367	29664466	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:29215963;1allele=T/A;version=Hapmap2;RS=rs825302649;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	29765123	29765222	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:29317061;1allele=A/G;version=Hapmap2;RS=rs844979575;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	29917109	29917208	.	+	.	Name=Height_above_ear;B73v2_pos=3:3129598;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	29990614	29990713	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:29537144;1allele=G/A;version=Hapmap2;RS=rs131761514;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	30079791	30079890	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:29626724;1allele=G/A;version=Hapmap1;RS=rs128513305;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	30079904	30080003	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:29626837;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	30079920	30080019	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:29626853;1allele=C/A;version=Hapmap1;RS=rs131761592;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	30080048	30080147	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:29626981;1allele=A/G;version=Hapmap2;RS=rs278879733;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	30137217	30137316	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:29683845;1allele=A/C;version=Hapmap2;RS=rs844729653;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	30287285	30287384	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153154529;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	30574978	30575077	.	+	.	Name=Starch;B73v2_pos=3:44586979;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	30648414	30648513	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:30190900;1allele=A/G;version=Hapmap2;RS=rs278880529;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	30655671	30655770	.	+	.	Name=Ear_row_number;B73v2_pos=10:30198158;1allele=G/A;version=Hapmap2;RS=rs128514412;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	30935192	30935290	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:30456250;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	30990864	30990963	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:30515003;1allele=C/G;version=Hapmap2;RS=rs812963910;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	31131177	31131276	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:30654932;1allele=A/G;version=Hapmap2;RS=rs816460500;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	31289186	31289285	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:30809517;1allele=A/G;version=Hapmap2;RS=rs821357040;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	31295866	31295965	.	+	.	Name=Tassel_length;B73v2_pos=1:287876178;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	31301660	31301759	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:30821993;1allele=A/G;version=Hapmap2;RS=rs803077557;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	31488106	31488205	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:31004416;1allele=A/C;version=Hapmap2;RS=rs829451441;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	31834669	31834768	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:199495594;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	31922328	31922427	.	+	.	Name=Plant_height;B73v2_pos=1:7919515;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	31928670	31928769	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:159568913;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	31928670	31928769	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:159568913;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	32653169	32653268	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:32134036;1allele=A/C;version=Hapmap2;RS=rs827976278;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	32752609	32752708	.	+	.	Name=Days_to_silk;B73v2_pos=9:81797680;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	32822225	32822324	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:32298180;1allele=A/G;version=Hapmap2;RS=rs725952345;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	33724146	33724245	.	+	.	Name=Protein;B73v2_pos=10:33149474;1allele=T/C;version=Hapmap2;RS=rs841978658;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	33752984	33753083	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:167887025;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	33762821	33762920	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:33186191;1allele=A/C;version=Hapmap2;RS=rs832259756;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	33763723	33763822	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:33187093;1allele=T/C;version=Hapmap2;RS=rs825499579;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	33891662	33891761	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:33328246;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	34083146	34083245	.	+	.	Name=Tassel_length;B73v2_pos=7:105121686;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	34231943	34232042	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:33639418;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	34233893	34233992	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:33641447;1allele=A/C;version=Hapmap2;RS=rs839262322;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	34342602	34342702	.	+	.	Name=Plant_height;B73v2_pos=10:33756530;1allele=A/G;version=Hapmap2;RS=rs823566677;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	34352470	34352569	.	+	.	Name=Plant_height;B73v2_pos=10:33766420;1allele=A/C;version=Hapmap2;RS=rs807552021;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	34393668	34393767	.	+	.	Name=Glucose;B73v2_pos=10:33797416;1allele=G/C;version=Hapmap2;RS=rs832836301;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	34435108	34435207	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:33839430;1allele=A/G;version=Hapmap2;RS=rs1062985739;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	34542406	34542505	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:127580171;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	34626873	34626972	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:34023491;1allele=T/C;version=Hapmap2;RS=rs726502243;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	34672674	34672773	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:34078909;1allele=T/A;version=Hapmap2;RS=rs844713649;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	34672702	34672801	.	+	.	Name=Starch;B73v2_pos=10:34078937;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	34675959	34676058	.	+	.	Name=Ear_row_number;B73v2_pos=10:34082194;1allele=C/T;version=Hapmap2;RS=rs818064255;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	34737934	34738033	.	+	.	Name=Plant_height;B73v2_pos=10:34146977;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	34818053	34818152	.	+	.	Name=Ear_height;B73v2_pos=10:34239433;1allele=T/C;version=Hapmap2;RS=rs278883788;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	34857036	34857135	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:34320017;1allele=-/+;version=Hapmap2;RS=rs821916845;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	34929398	34929497	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:34355629;1allele=C/T;version=Hapmap2;RS=rs834859103;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	34934290	34934389	.	+	.	Name=Ear_height;B73v2_pos=10:34360521;1allele=C/T;version=Hapmap2;RS=rs724949446;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	34984808	34984907	.	+	.	Name=Ear_height;B73v2_pos=10:34410573;1allele=G/A;version=Hapmap2;RS=rs1063228920;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	34986683	34986782	.	+	.	Name=Ear_height;B73v2_pos=10:34412448;1allele=A/G;version=Hapmap2;RS=rs278884072;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	35582347	35582446	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:35005855;1allele=A/G;version=Hapmap2;RS=rs1061948908;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	35593565	35593664	.	+	.	Name=Plant_height;B73v2_pos=10:35017837;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	35593565	35593664	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:35017837;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	35597440	35597539	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:35021712;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	35597455	35597554	.	+	.	Name=Ear_height;B73v2_pos=10:35021727;1allele=G/A;version=Hapmap2;RS=rs822603536;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	35699880	35699979	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:35123399;1allele=A/C;version=Hapmap2;RS=rs128308767;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	36049249	36049348	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:35473154;1allele=A/G;version=Hapmap2;RS=rs823610505;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	36474051	36474150	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:194469341;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	37156333	37156432	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:36453176;1allele=A/C;version=Hapmap2;RS=rs1060784924;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	37196321	37196420	.	+	.	Name=Ear_row_number;B73v2_pos=10:36496733;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	37289042	37289141	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:36586107;1allele=C/T;version=Hapmap2;RS=rs850207579;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	37423439	37423538	.	+	.	Name=Cob_diameter;B73v2_pos=10:36697591;1allele=T/C;version=Hapmap2;RS=rs813223603;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	37460303	37460402	.	+	.	Name=Ear_row_number;B73v2_pos=10:36724261;1allele=A/G;version=Hapmap2;RS=rs827123556;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	37462175	37462274	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:36726133;1allele=A/T;version=Hapmap2;RS=rs825838583;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	37514517	37514616	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:36777185;1allele=T/C;version=Hapmap2;RS=rs278886900;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	37984586	37984685	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:206005362;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	38780194	38780293	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:37999291;1allele=T/C;version=Hapmap2;RS=rs128536871;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	39717887	39717986	.	+	.	Name=Glucose;B73v2_pos=10:38907734;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	39791200	39791299	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:231447679;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	40885785	40885884	.	+	.	Name=Glucose;B73v2_pos=10:40141477;1allele=C/A;version=Hapmap2;RS=rs815608566;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	40895177	40895276	.	+	.	Name=Glucose;B73v2_pos=10:40150869;1allele=C/G;version=Hapmap2;RS=rs825723476;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	40983054	40983153	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:40243601;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	41056967	41057066	.	+	.	Name=Stalk_strength;B73v2_pos=10:40316295;1allele=C/T;version=Hapmap2;RS=rs831287358;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	41321876	41321975	.	+	.	Name=Leaf_width;B73v2_pos=2:105108696;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	41615275	41615374	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:40866468;1allele=C/T;version=Hapmap2;RS=rs821721246;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	43015434	43015533	.	+	.	Name=Cob_diameter;B73v2_pos=10:42242859;1allele=T/C;version=Hapmap2;RS=rs832387883;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	43367217	43367316	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:154936931;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	43792136	43792235	.	+	.	Name=Glucose;B73v2_pos=10:43004724;1allele=G/A;version=Hapmap2;RS=rs846363442;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	44493036	44493135	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:43696541;1allele=C/T;version=Hapmap2;RS=rs836995636;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	44795067	44795166	.	+	.	Name=Cob_diameter;B73v2_pos=10:43995840;1allele=A/C;version=Hapmap2;RS=rs128545039;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	45107263	45107362	.	+	.	Name=Glucose;B73v2_pos=10:44307827;1allele=T/C;version=Hapmap2;RS=rs832000820;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	45298304	45298403	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:44491923;1allele=C/T;version=Hapmap2;RS=rs1064663749;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	45381737	45381836	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:44584746;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	45458060	45458159	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:933473;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	45817496	45817595	.	+	.	Name=Ear_height;B73v2_pos=10:45015023;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	45874429	45874528	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:118107642;1allele=T/C;version=Hapmap2;RS=rs829743758;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	45954416	45954515	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:191924241;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	46767028	46767127	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:45959793;1allele=T/C;version=Hapmap2;RS=rs725325452;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	47478181	47478280	.	+	.	Name=Plant_height;B73v2_pos=10:46655648;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	49007026	49007125	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:48192361;1allele=T/G;version=Hapmap2;RS=rs846382034;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	49231405	49231504	.	+	.	Name=Starch;B73v2_pos=10:48417693;1allele=A/C;version=Hapmap2;RS=rs1061226984;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	49346042	49346141	.	+	.	Name=Starch;B73v2_pos=10:48542327;1allele=T/A;version=Hapmap2;RS=rs128549166;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	49346591	49346690	.	+	.	Name=Starch;B73v2_pos=10:48542876;1allele=G/A;version=Hapmap2;RS=rs128549169;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	49751435	49751534	.	+	.	Name=Starch;B73v2_pos=10:48989611;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	50345455	50345554	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:41308879;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	51189095	51189194	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:50408745;1allele=G/A;version=Hapmap2;RS=rs1063958269;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	53398637	53398736	.	+	.	Name=Plant_height;B73v2_pos=10:52455198;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	53470667	53470766	.	+	.	Name=Ear_height;B73v2_pos=1:119077482;1allele=C/T;version=Hapmap2;RS=rs807895330;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	53525665	53525764	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:52582208;1allele=G/A;version=Hapmap2;RS=rs724457045;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	53648674	53648773	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:52645812;1allele=A/T;version=Hapmap2;RS=rs840878457;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	53721834	53721933	.	+	.	Name=Ear_height;B73v2_pos=10:52792807;1allele=T/C;version=Hapmap2;RS=rs1064613410;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	54228378	54228477	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:53303476;1allele=G/A;version=Hapmap2;RS=rs830666063;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	54555819	54555918	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:53600367;1allele=C/A;version=Hapmap2;RS=rs128522643;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	54611411	54611510	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:53654837;1allele=A/G;version=Hapmap2;RS=rs128522789;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	54622673	54622772	.	+	.	Name=Leaf_length;B73v2_pos=10:53666100;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	54644626	54644725	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:53688053;1allele=C/T;version=Hapmap2;RS=rs823882091;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	54828977	54829076	.	+	.	Name=Height_above_ear;B73v2_pos=10:53865051;1allele=G/A;version=Hapmap2;RS=rs1062832272;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	54895366	54895465	.	+	.	Name=Starch;B73v2_pos=10:53926582;1allele=G/C;version=Hapmap2;RS=rs806139956;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	55035306	55035405	.	+	.	Name=Ear_height;B73v2_pos=10:54080222;1allele=G/A;version=Hapmap2;RS=rs828135760;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	55059593	55059692	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:54013614;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	55134151	55134250	.	+	.	Name=Plant_height;B73v2_pos=10:54182261;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	55298443	55298542	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:54336390;1allele=A/G;version=Hapmap2;RS=rs128523876;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	55344021	55344120	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:54382737;1allele=T/G;version=Hapmap2;RS=rs128524110;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	55422967	55423066	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:54464776;1allele=T/C;version=Hapmap2;RS=rs128524346;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	55425169	55425268	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:54466978;1allele=T/C;version=Hapmap2;RS=rs128524354;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	55518610	55518709	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:54554700;1allele=A/G;version=Hapmap2;RS=rs278900405;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	55556075	55556174	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:54591887;1allele=A/G;version=Hapmap2;RS=rs128310505;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	55672691	55672790	.	+	.	Name=Starch;B73v2_pos=10:54694845;1allele=C/T;version=Hapmap2;RS=rs128310539;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	55745968	55746067	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:54767858;1allele=C/A;version=Hapmap2;RS=rs278900748;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	55751683	55751782	.	+	.	Name=Starch;B73v2_pos=10:54773573;1allele=G/A;version=Hapmap2;RS=rs838772273;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	55764624	55764723	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:54830940;1allele=T/C;version=Hapmap2;RS=rs128524935;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	55805539	55805638	.	+	.	Name=Glucose;B73v2_pos=10:54863796;1allele=G/C;version=Hapmap2;RS=rs818382006;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	55914038	55914137	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:54971685;1allele=A/G;version=Hapmap2;RS=rs278900931;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	55924548	55924647	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:54981400;1allele=T/A;version=Hapmap2;RS=rs835670886;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	55962556	55962655	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158571079;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	56026714	56026813	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:55108902;1allele=T/C;version=Hapmap2;RS=rs811395603;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	56036546	56036645	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:55118734;1allele=C/T;version=Hapmap2;RS=rs811668914;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	56044619	56044718	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:135827333;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	56692627	56692726	.	+	.	Name=Ear_height;B73v2_pos=9:96507067;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	57959468	57959567	.	+	.	Name=Ear_height;B73v2_pos=10:56958836;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	58658252	58658351	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:190358084;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	58667122	58667221	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:57684647;1allele=C/G;version=Hapmap2;RS=rs813869883;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	58779720	58779819	.	+	.	Name=Glucose;B73v2_pos=10:57797886;1allele=C/A;version=Hapmap2;RS=rs825556302;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	58779892	58779991	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:57798058;1allele=A/T;version=Hapmap2;RS=rs814987082;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	58831888	58831987	.	+	.	Name=Glucose;B73v2_pos=10:57848886;1allele=T/A;version=Hapmap2;RS=rs819198623;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	58876280	58876379	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:160706775;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59144393	59144492	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:207478232;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59283383	59283482	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:4060104;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59354789	59354888	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109762473;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59529617	59529716	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:58547318;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59579437	59579536	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:58597060;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59593885	59593984	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:58611513;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59650852	59650951	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:58669486;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59663913	59664012	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:151753434;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	59997268	59997367	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:59007636;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	60128229	60128328	.	+	.	Name=Leaf_length;B73v2_pos=10:59133158;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	60380367	60380466	.	+	.	Name=Ear_row_number;B73v2_pos=6:190864;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	60607476	60607575	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:59582626;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	60771583	60771682	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:59748507;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	60802358	60802457	.	+	.	Name=Leaf_length;B73v2_pos=10:59779412;1allele=C/T;version=Hapmap2;RS=rs813693072;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	60900553	60900652	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:59877974;1allele=G/A;version=Hapmap2;RS=rs802507756;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	61048127	61048226	.	+	.	Name=Ear_height;B73v2_pos=10:60021434;1allele=T/C;version=Hapmap2;RS=rs128531790;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	61086366	61086465	.	+	.	Name=Ear_height;B73v2_pos=10:60059672;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	61288679	61288778	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:60279319;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	61611138	61611237	.	+	.	Name=Total_amino_acids;B73v2_pos=10:60557697;1allele=G/C;version=Hapmap2;RS=rs128532758;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	61619864	61619963	.	+	.	Name=Malate;B73v2_pos=10:60566424;1allele=C/T;version=Hapmap2;RS=rs841347739;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	61621277	61621376	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:60567837;1allele=A/G;version=Hapmap2;RS=rs845358542;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	61841034	61841133	.	+	.	Name=Ear_height;B73v2_pos=3:202982317;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	62062358	62062457	.	+	.	Name=Glucose;B73v2_pos=10:60942512;1allele=C/G;version=Hapmap2;RS=rs828546049;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	62493037	62493136	.	+	.	Name=Leaf_length;B73v2_pos=10:61379008;1allele=T/G;version=Hapmap2;RS=rs822199831;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	62835795	62835894	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:216126377;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	62919386	62919485	.	+	.	Name=Glucose;B73v2_pos=10:61788858;1allele=T/C;version=Hapmap2;RS=rs1062999293;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	63091599	63091698	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:96466952;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	63195547	63195646	.	+	.	Name=Glucose;B73v2_pos=10:62068422;1allele=T/C;version=Hapmap2;RS=rs278907462;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	63211475	63211574	.	+	.	Name=Cob_diameter;B73v2_pos=6:7023771;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	63230019	63230118	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:62102816;1allele=C/T;version=Hapmap2;RS=rs810077862;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	63388564	63388663	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:159709657;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	63411308	63411407	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:62279879;1allele=A/T;version=Hapmap2;RS=rs844401392;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	64511633	64511732	.	+	.	Name=Leaf_length;B73v2_pos=10:63372786;1allele=G/C;version=Hapmap2;RS=rs806877215;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	64524808	64524907	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:63381972;1allele=C/T;version=Hapmap2;RS=rs829054962;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	65112783	65112882	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:63969247;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	65591615	65591714	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:128584302;1allele=A/G;version=Hapmap2;RS=rs818292734;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	65593876	65593975	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:23269753;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	65733109	65733208	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:64647379;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	65834458	65834557	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:97149284;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	65876343	65876442	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:64841090;1allele=A/G;version=Hapmap2;RS=rs809030960;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	66019758	66019857	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:64984512;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	66022921	66023020	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:64987675;1allele=A/G;version=Hapmap2;RS=rs846073947;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	66217660	66217759	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:65167185;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	66275967	66276066	.	+	.	Name=Leaf_length;B73v2_pos=10:120868521;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	66932498	66932597	.	+	.	Name=Total_amino_acids;B73v2_pos=10:65848534;1allele=G/A;version=Hapmap2;RS=rs837645850;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	67033896	67033995	.	+	.	Name=Starch;B73v2_pos=10:65949626;1allele=C/T;version=Hapmap2;RS=rs801772182;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	67263652	67263751	.	+	.	Name=Starch;B73v2_pos=10:66172010;1allele=T/C;version=Hapmap2;RS=rs820106242;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	67263913	67264012	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:66172271;1allele=T/A;version=Hapmap2;RS=rs812796404;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	67263913	67264012	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:66172271;1allele=T/A;version=Hapmap2;RS=rs812796404;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	67986415	67986514	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:66860572;1allele=G/A;version=Hapmap2;RS=rs843069694;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	68038868	68038967	.	+	.	Name=Height_above_ear;B73v2_pos=10:66908609;1allele=A/G;version=Hapmap2;RS=rs827365495;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	68062041	68062140	.	+	.	Name=Height_above_ear;B73v2_pos=10:66932092;1allele=A/G;version=Hapmap2;RS=rs1060660811;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	68062046	68062145	.	+	.	Name=Height_above_ear;B73v2_pos=10:66932097;1allele=A/G;version=Hapmap2;RS=rs1063392033;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	68085393	68085492	.	+	.	Name=Height_above_ear;B73v2_pos=10:66955456;1allele=A/G;version=Hapmap2;RS=rs128323767;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	68085423	68085522	.	+	.	Name=Height_above_ear;B73v2_pos=10:66955486;1allele=T/G;version=Hapmap2;RS=rs128560680;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	68093170	68093269	.	+	.	Name=Height_above_ear;B73v2_pos=10:66963234;1allele=A/C;version=Hapmap2;RS=rs128323787;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	68120918	68121017	.	+	.	Name=Total_amino_acids;B73v2_pos=10:66990597;1allele=T/G;version=Hapmap2;RS=rs128323791;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	68124413	68124512	.	+	.	Name=Total_amino_acids;B73v2_pos=10:66994092;1allele=G/A;version=Hapmap2;RS=rs278913568;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	68124847	68124946	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:66994526;1allele=G/A;version=Hapmap2;RS=rs724179883;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	68140576	68140675	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:67010262;1allele=C/T;version=Hapmap2;RS=rs278913612;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	68885667	68885766	.	+	.	Name=Plant_height;B73v2_pos=10:67764751;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	69539189	69539288	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:68421485;1allele=G/T;version=Hapmap2;RS=rs824823368;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	69929446	69929545	.	+	.	Name=Leaf_length;B73v2_pos=10:68809167;1allele=C/T;version=Hapmap2;RS=rs818913646;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	69977144	69977243	.	+	.	Name=Stalk_strength;B73v2_pos=6:162958494;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	70067777	70067876	.	+	.	Name=Starch;B73v2_pos=10:68947995;1allele=T/C;version=Hapmap2;RS=rs823053216;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	70238334	70238433	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:69119220;1allele=C/A;version=Hapmap2;RS=rs1062511273;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	70361719	70361818	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:69242294;1allele=G/A;version=Hapmap2;RS=rs828410056;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	70596557	70596656	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:69576711;1allele=C/T;version=Hapmap2;RS=rs840748033;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	70613681	70613780	.	+	.	Name=Total_amino_acids;B73v2_pos=10:69593835;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	70626133	70626232	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:69606287;1allele=C/T;version=Hapmap1;RS=rs131774102;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	70646110	70646209	.	+	.	Name=Starch;B73v2_pos=10:69626265;1allele=G/A;version=Hapmap2;RS=rs825658336;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	70690252	70690351	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:69663293;1allele=G/A;version=Hapmap2;RS=rs821592537;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	70866044	70866143	.	+	.	Name=Ear_height;B73v2_pos=10:69852555;1allele=G/A;version=Hapmap2;RS=rs808560916;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	71085481	71085580	.	+	.	Name=Cob_diameter;B73v2_pos=10:70060980;1allele=G/A;version=Hapmap1;RS=rs131774295;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	71085481	71085580	.	+	.	Name=Ear_row_number;B73v2_pos=10:70060980;1allele=G/A;version=Hapmap1;RS=rs131774295;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	71350091	71350190	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:70325872;1allele=T/G;version=Hapmap2;RS=rs845422264;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	71491489	71491589	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:70437822;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	71536202	71536301	.	+	.	Name=Cob_diameter;B73v2_pos=10:70518749;1allele=G/C;version=Hapmap2;RS=rs824654369;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	71537292	71537391	.	+	.	Name=Ear_height;B73v2_pos=10:70519839;1allele=G/A;version=Hapmap2;RS=rs813336273;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	71633661	71633760	.	+	.	Name=Plant_height;B73v2_pos=10:70615077;1allele=A/T;version=Hapmap2;RS=rs724392483;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	71855901	71856000	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:70833471;1allele=A/G;version=Hapmap2;RS=rs1063819986;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	71935654	71935753	.	+	.	Name=Leaf_length;B73v2_pos=10:70919136;1allele=A/C;version=Hapmap2;RS=rs810921951;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	71939636	71939735	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:70923118;1allele=A/G;version=Hapmap2;RS=rs813354962;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	71992805	71992904	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:70976147;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	71993339	71993438	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:70976681;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	72027234	72027333	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:71010495;1allele=C/T;version=Hapmap2;RS=rs1062226066;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	72054736	72054835	.	+	.	Name=Cob_diameter;B73v2_pos=4:174751130;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	72061441	72061540	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:71045487;1allele=C/T;version=Hapmap2;RS=rs822556075;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	72076847	72076946	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:71060785;1allele=T/C;version=Hapmap2;RS=rs807693180;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	72476399	72476498	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:71481045;1allele=A/G;version=Hapmap1;RS=rs826381402;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	72480022	72480121	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:71484668;1allele=C/A;version=Hapmap1;RS=rs131774880;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	72534646	72534745	.	+	.	Name=Starch;B73v2_pos=10:71538350;1allele=C/T;version=Hapmap2;RS=rs813931113;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	72601095	72601194	.	+	.	Name=Tassel_length;B73v2_pos=3:15680907;1allele=G/A;version=Hapmap2;RS=rs844364614;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	72611089	72611188	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:71608833;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	72738725	72738824	.	+	.	Name=Ear_row_number;B73v2_pos=10:71750082;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	72740451	72740550	.	+	.	Name=Ear_row_number;B73v2_pos=10:71748356;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	72755461	72755560	.	+	.	Name=Ear_row_number;B73v2_pos=10:71733344;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	72816596	72816695	.	+	.	Name=Starch;B73v2_pos=10:71808092;1allele=G/A;version=Hapmap2;RS=rs811349195;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	72955773	72955872	.	+	.	Name=Cob_diameter;B73v2_pos=10:71947002;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	72966934	72967033	.	+	.	Name=Cob_diameter;B73v2_pos=10:71957178;1allele=C/T;version=Hapmap2;RS=rs809449844;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	73022793	73022892	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:72013922;1allele=G/A;version=Hapmap2;RS=rs816726495;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	73046456	73046555	.	+	.	Name=Cob_diameter;B73v2_pos=10:72037587;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	73214335	73214434	.	+	.	Name=Cob_diameter;B73v2_pos=10:72202333;1allele=A/G;version=Hapmap2;RS=rs816210701;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	73222051	73222150	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:72210050;1allele=A/G;version=Hapmap2;RS=rs1061320589;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	73273502	73273601	.	+	.	Name=Cob_diameter;B73v2_pos=10:72260732;1allele=A/G;version=Hapmap2;RS=rs826670284;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	73274785	73274884	.	+	.	Name=Cob_diameter;B73v2_pos=10:72262015;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	73325279	73325378	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:72312402;1allele=A/C;version=Hapmap1;RS=rs131775254;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	73641962	73642061	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:72623599;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	73645455	73645554	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:72627092;1allele=G/A;version=Hapmap2;RS=rs725292610;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	73812504	73812603	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:72793231;1allele=G/A;version=Hapmap2;RS=rs818282056;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	73847590	73847689	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:72820011;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	73865534	73865633	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:72837704;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	74003299	74003398	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:72975790;1allele=A/G;version=Hapmap2;RS=rs830945675;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	74197321	74197420	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:73180206;1allele=C/A;version=Hapmap2;RS=rs807284971;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	74237318	74237417	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:73219341;1allele=A/G;version=Hapmap2;RS=rs824952453;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	74237749	74237848	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:73219772;1allele=C/T;version=Hapmap2;RS=rs832270905;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	74269664	74269763	.	+	.	Name=Stalk_strength;B73v2_pos=2:29825524;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	74402777	74402876	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:73373770;1allele=G/A;version=Hapmap2;RS=rs822944709;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	74461628	74461727	.	+	.	Name=Starch;B73v2_pos=10:73436240;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	74542595	74542694	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:73512922;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	74543407	74543506	.	+	.	Name=Cob_diameter;B73v2_pos=10:73513734;1allele=C/T;version=Hapmap2;RS=rs278919907;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	74557816	74557915	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:73622674;1allele=G/C;version=Hapmap2;RS=rs813527937;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	74559053	74559152	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:73623859;1allele=C/G;version=Hapmap2;RS=rs128569565;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	74559193	74559292	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:73623999;1allele=T/C;version=Hapmap2;RS=rs128569566;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	74746188	74746287	.	+	.	Name=Leaf_length;B73v2_pos=4:194090106;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	75432559	75432658	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:74314994;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	75462003	75462102	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:74350873;1allele=G/A;version=Hapmap2;RS=rs801483704;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	75506436	75506535	.	+	.	Name=Cob_diameter;B73v2_pos=10:74395324;1allele=A/G;version=Hapmap2;RS=rs128570154;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	75508194	75508293	.	+	.	Name=Cob_diameter;B73v2_pos=10:74397082;1allele=T/C;version=Hapmap2;RS=rs1061177914;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	75511827	75511926	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:74400715;1allele=T/G;version=Hapmap2;RS=rs128570198;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	75512542	75512641	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:74401431;1allele=A/C;version=Hapmap2;RS=rs278920361;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	75523736	75523835	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:74412564;1allele=G/T;version=Hapmap2;RS=rs278920376;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	75725330	75725429	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:74614481;1allele=T/C;version=Hapmap2;RS=rs820353605;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	75728876	75728975	.	+	.	Name=Height_above_ear;B73v2_pos=10:74618028;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	75729243	75729342	.	+	.	Name=Leaf_width;B73v2_pos=10:74618395;1allele=A/G;version=Hapmap2;RS=rs849785903;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	75732708	75732807	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:74621860;1allele=G/T;version=Hapmap2;RS=rs814912362;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	75732714	75732813	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:74621866;1allele=T/A;version=Hapmap2;RS=rs817741325;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	75733781	75733880	.	+	.	Name=Ear_row_number;B73v2_pos=10:74622933;1allele=C/T;version=Hapmap2;RS=rs827193677;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	75909478	75909577	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:74786145;1allele=G/C;version=Hapmap2;RS=rs810954356;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	76149923	76150022	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:75018470;1allele=T/G;version=Hapmap2;RS=rs819720662;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	76434724	76434823	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:75291375;1allele=T/C;version=Hapmap1;RS=rs128571440;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	76659822	76659921	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:75524737;1allele=T/C;version=Hapmap2;RS=rs816613589;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	76694386	76694485	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:75560414;1allele=A/G;version=Hapmap2;RS=rs813578332;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	76808512	76808611	.	+	.	Name=Leaf_length;B73v2_pos=10:75668769;1allele=T/C;version=Hapmap2;RS=rs827752095;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	76956713	76956812	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:75817924;1allele=G/A;version=Hapmap2;RS=rs816118699;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	76959758	76959857	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:75820969;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	77028446	77028545	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:75890870;1allele=A/G;version=Hapmap2;RS=rs830000318;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	77039125	77039224	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:75901549;1allele=C/T;version=Hapmap2;RS=rs827729020;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	77458728	77458827	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:76223270;1allele=C/T;version=Hapmap2;RS=rs128328746;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	77465924	77466023	.	+	.	Name=Cob_diameter;B73v2_pos=10:76230470;1allele=C/T;version=Hapmap2;RS=rs821844217;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	77713325	77713424	.	+	.	Name=Leaf_length;B73v2_pos=10:76476641;1allele=C/G;version=Hapmap2;RS=rs278923370;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	77747593	77747692	.	+	.	Name=Height_above_ear;B73v2_pos=10:76511433;1allele=G/A;version=Hapmap2;RS=rs128573056;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	77747916	77748015	.	+	.	Name=Glucose;B73v2_pos=10:76511756;1allele=T/G;version=Hapmap2;RS=rs128573067;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	77922378	77922477	.	+	.	Name=Cob_diameter;B73v2_pos=10:76686484;1allele=T/G;version=Hapmap2;RS=rs845596129;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	77973554	77973653	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:76737568;1allele=T/G;version=Hapmap2;RS=rs278923938;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	77992590	77992689	.	+	.	Name=Ear_height;B73v2_pos=10:76756610;1allele=A/G;version=Hapmap2;RS=rs829201500;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	78010900	78010999	.	+	.	Name=Ear_height;B73v2_pos=10:76774925;1allele=A/G;version=Hapmap2;RS=rs846326951;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	78011057	78011156	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:76775082;1allele=T/C;version=Hapmap2;RS=rs820398533;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	78012433	78012532	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:76776458;1allele=T/A;version=Hapmap2;RS=rs826074769;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	78136290	78136389	.	+	.	Name=Ear_height;B73v2_pos=10:76895927;1allele=A/G;version=Hapmap2;RS=rs829661586;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	78178170	78178269	.	+	.	Name=Ear_height;B73v2_pos=10:76937936;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	78180375	78180474	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:76940141;1allele=G/A;version=Hapmap2;RS=rs822268036;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	78326687	78326786	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:77089621;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	78423726	78423825	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:77185942;1allele=T/A;version=Hapmap2;RS=rs128574026;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	78423950	78424049	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:77186166;1allele=C/T;version=Hapmap1;RS=rs131777051;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	78425463	78425562	.	+	.	Name=Plant_height;B73v2_pos=10:77187679;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	78426121	78426220	.	+	.	Name=Ear_height;B73v2_pos=10:77188337;1allele=G/C;version=Hapmap2;RS=rs128574046;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	78426204	78426303	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:77188420;1allele=C/T;version=Hapmap2;RS=rs131777078;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	78508267	78508366	.	+	.	Name=Plant_height;B73v2_pos=10:77270361;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	78607819	78607918	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:77333857;1allele=A/G;version=Hapmap2;RS=rs830929929;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	78629433	78629532	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:77355379;1allele=A/T;version=Hapmap2;RS=rs804596237;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	78641140	78641239	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:77367086;1allele=G/C;version=Hapmap2;RS=rs817269531;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	78912992	78913091	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:77633513;1allele=T/C;version=Hapmap2;RS=rs801897434;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	78948961	78949060	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:77669240;1allele=A/T;version=Hapmap1;RS=rs128574375;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	79092288	79092387	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:77808664;1allele=G/C;version=Hapmap2;RS=rs814783484;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	79092288	79092387	.	+	.	Name=Glucose;B73v2_pos=10:77808664;1allele=G/C;version=Hapmap2;RS=rs814783484;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	79321985	79322084	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:39528377;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	79321985	79322084	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:39528377;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	79425654	79425753	.	+	.	Name=Leaf_length;B73v2_pos=10:78145957;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	79430538	79430637	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:78150841;1allele=C/T;version=Hapmap2;RS=rs813452807;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	79652953	79653052	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:78393971;1allele=T/G;version=Hapmap2;RS=rs128575105;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	79653815	79653914	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:78394833;1allele=C/A;version=Hapmap2;RS=rs278925043;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	79766806	79766905	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:78508345;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	79773696	79773795	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:162751805;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	80207084	80207183	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:78937326;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	80482034	80482133	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:79173899;1allele=G/T;version=Hapmap2;RS=rs278925513;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	80618259	80618358	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:79312598;1allele=T/A;version=Hapmap2;RS=rs837142492;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	80897317	80897416	.	+	.	Name=Glucose;B73v2_pos=10:79595699;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	81073027	81073126	.	+	.	Name=Stalk_strength;B73v2_pos=10:79766021;1allele=G/C;version=Hapmap2;RS=rs128330023;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	81073119	81073218	.	+	.	Name=Plant_height;B73v2_pos=10:79766113;1allele=T/C;version=Hapmap2;RS=rs128330025;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81082968	81083067	.	+	.	Name=Plant_height;B73v2_pos=10:79775893;1allele=A/G;version=Hapmap2;RS=rs1063090099;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	81094937	81095036	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:79787210;1allele=C/A;version=Hapmap2;RS=rs1060694784;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	81123472	81123571	.	+	.	Name=Leaf_length;B73v2_pos=10:79815825;1allele=G/T;version=Hapmap2;RS=rs842610717;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	81149681	81149780	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:79841970;1allele=C/T;version=Hapmap2;RS=rs819490975;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81173766	81173865	.	+	.	Name=Leaf_length;B73v2_pos=10:79875371;1allele=T/A;version=Hapmap2;RS=rs819289270;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	81173834	81173933	.	+	.	Name=Leaf_length;B73v2_pos=10:79875439;1allele=G/A;version=Hapmap2;RS=rs801702663;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	81241234	81241333	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:79943011;1allele=C/T;version=Hapmap2;RS=rs808380544;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81246010	81246109	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:79947787;1allele=T/A;version=Hapmap2;RS=rs850132253;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	81286914	81287013	.	+	.	Name=Glucose;B73v2_pos=10:79987734;1allele=A/G;version=Hapmap2;RS=rs128576518;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	81306123	81306222	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:80006947;1allele=C/T;version=Hapmap2;RS=rs825749410;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81306552	81306651	.	+	.	Name=Glucose;B73v2_pos=10:80007376;1allele=A/G;version=Hapmap2;RS=rs807610828;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	81307127	81307226	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:80007951;1allele=C/T;version=Hapmap2;RS=rs806162305;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81339593	81339692	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:80039874;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	81347492	81347591	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:80047767;1allele=C/T;version=Hapmap1;RS=rs131778796;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81352513	81352612	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:80052787;1allele=A/C;version=Hapmap2;RS=rs128576586;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	81680964	81681063	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:80395555;1allele=C/T;version=Hapmap2;RS=rs835425910;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81863421	81863520	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:80585915;1allele=G/T;version=Hapmap2;RS=rs278925896;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	81864077	81864176	.	+	.	Name=Ear_height;B73v2_pos=10:80586571;1allele=C/T;version=Hapmap2;RS=rs128576800;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	81867232	81867331	.	+	.	Name=Plant_height;B73v2_pos=10:80589726;1allele=A/T;version=Hapmap2;RS=rs278925915;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	81867234	81867333	.	+	.	Name=Glucose;B73v2_pos=10:80589728;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	81873559	81873658	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:80596053;1allele=C/A;version=Hapmap2;RS=rs726506233;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	81877368	81877467	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:80599862;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	81879750	81879849	.	+	.	Name=Plant_height;B73v2_pos=10:80602244;1allele=A/T;version=Hapmap2;RS=rs802990513;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	82043021	82043120	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:80776712;1allele=G/A;version=Hapmap2;RS=rs278926070;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	82053235	82053334	.	+	.	Name=Cob_diameter;B73v2_pos=10:80786927;1allele=A/T;version=Hapmap2;RS=rs1064384447;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	82061446	82061545	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:80795138;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	82092766	82092865	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:80826178;1allele=C/A;version=Hapmap2;RS=rs128577198;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	82171221	82171320	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:80906276;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	82478054	82478153	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:81225731;1allele=A/G;version=Hapmap2;RS=rs842338427;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	82605175	82605274	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:81416373;1allele=A/C;version=Hapmap2;RS=rs820412946;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	82716075	82716174	.	+	.	Name=Ear_row_number;B73v2_pos=10:81535011;1allele=C/T;version=Hapmap2;RS=rs816147350;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	82879206	82879305	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:81712849;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	83097852	83097951	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:81884517;1allele=C/T;version=Hapmap2;RS=rs829903112;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	83193394	83193493	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:82028729;1allele=C/T;version=Hapmap2;RS=rs848984131;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	83204450	83204549	.	+	.	Name=Ear_row_number;B73v2_pos=10:82039790;1allele=T/C;version=Hapmap2;RS=rs278927593;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	83207748	83207847	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:82043088;1allele=C/G;version=Hapmap2;RS=rs128578874;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	83246482	83246581	.	+	.	Name=Glucose;B73v2_pos=10:81975983;1allele=T/C;version=Hapmap2;RS=rs815968054;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	83322242	83322341	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:82107653;1allele=C/G;version=Hapmap2;RS=rs802384273;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	83334673	83334772	.	+	.	Name=Ear_height;B73v2_pos=10:82120084;1allele=G/C;version=Hapmap2;RS=rs840539929;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	83398178	83398277	.	+	.	Name=Glucose;B73v2_pos=10:82174854;1allele=A/T;version=Hapmap2;RS=rs843009537;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	83413288	83413387	.	+	.	Name=Glucose;B73v2_pos=10:82190196;1allele=G/A;version=Hapmap2;RS=rs724338844;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	83932087	83932186	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:82269032;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	83948432	83948531	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:82252687;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	84024070	84024169	.	+	.	Name=Glucose;B73v2_pos=10:82351733;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	84716757	84716856	.	+	.	Name=Leaf_length;B73v2_pos=10:83065611;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	84716765	84716864	.	+	.	Name=Leaf_length;B73v2_pos=10:83065603;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	84863522	84863621	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:83213491;1allele=T/C;version=Hapmap2;RS=rs824421954;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	84880650	84880749	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:83229072;1allele=C/G;version=Hapmap2;RS=rs802219878;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	84881677	84881776	.	+	.	Name=Glucose;B73v2_pos=10:83230099;1allele=G/A;version=Hapmap2;RS=rs724959484;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	84918258	84918357	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:83266688;1allele=T/C;version=Hapmap2;RS=rs839553621;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	84941391	84941490	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:83289113;1allele=T/C;version=Hapmap2;RS=rs818223358;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	84942376	84942475	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:83290098;1allele=T/C;version=Hapmap2;RS=rs849491406;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	84989287	84989386	.	+	.	Name=Ear_height;B73v2_pos=10:83329219;1allele=G/A;version=Hapmap2;RS=rs821443786;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	85057113	85057212	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:83396550;1allele=A/G;version=Hapmap2;RS=rs834111241;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	85093257	85093356	.	+	.	Name=Leaf_length;B73v2_pos=10:83434102;1allele=C/T;version=Hapmap2;RS=rs845588109;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	85115077	85115176	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:83455872;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	85234737	85234836	.	+	.	Name=Leaf_length;B73v2_pos=10:83581788;1allele=T/C;version=Hapmap2;RS=rs849380631;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	85426345	85426444	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:83770120;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	85536339	85536438	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:83883072;1allele=C/T;version=Hapmap2;RS=rs815877478;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	85540923	85541022	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:83887656;1allele=A/T;version=Hapmap2;RS=rs803918769;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	85548229	85548328	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:83894962;1allele=G/A;version=Hapmap2;RS=rs727164948;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	85615418	85615517	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:83954531;1allele=C/T;version=Hapmap2;RS=rs825130856;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	85682233	85682332	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:84019041;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	85761146	85761245	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:84099182;1allele=T/C;version=Hapmap2;RS=rs837596265;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	85761180	85761279	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:84099216;1allele=C/T;version=Hapmap2;RS=rs820961816;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	85803904	85804003	.	+	.	Name=Cob_diameter;B73v2_pos=10:84135520;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	85815742	85815841	.	+	.	Name=Cob_diameter;B73v2_pos=10:84159140;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	85816681	85816780	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:84158201;1allele=C/T;version=Hapmap2;RS=rs818477862;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	85887281	85887380	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:84223161;1allele=C/T;version=Hapmap2;RS=rs834745043;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	85994903	85995002	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:84280403;1allele=C/A;version=Hapmap2;RS=rs809200306;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	86146475	86146574	.	+	.	Name=Ear_height;B73v2_pos=10:84431480;1allele=A/G;version=Hapmap2;RS=rs807672290;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	86296882	86296981	.	+	.	Name=Height_above_ear;B73v2_pos=2:3882518;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	86893772	86893871	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:85194221;1allele=C/T;version=Hapmap2;RS=rs847595088;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	86894520	86894619	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:85194969;1allele=A/C;version=Hapmap2;RS=rs828148573;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	86922512	86922611	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:85200655;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	86929761	86929860	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:85230711;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	86931777	86931876	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145827900;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	86968543	86968642	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249764551;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	86998517	86998616	.	+	.	Name=Leaf_length;B73v2_pos=10:85272286;1allele=A/G;version=Hapmap2;RS=rs815349675;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	87030183	87030282	.	+	.	Name=Leaf_length;B73v2_pos=10:85304116;1allele=G/T;version=Hapmap2;RS=rs827042656;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	87050975	87051074	.	+	.	Name=Leaf_length;B73v2_pos=10:85324916;1allele=A/T;version=Hapmap2;RS=rs278931318;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	87059373	87059472	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:85333316;1allele=A/G;version=Hapmap1;RS=rs829026408;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	87232732	87232831	.	+	.	Name=Glucose;B73v2_pos=10:85488412;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	87233318	87233417	.	+	.	Name=Glucose;B73v2_pos=10:85487826;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	87278540	87278639	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:85506476;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	87285698	87285797	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:167726110;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	87379336	87379435	.	+	.	Name=Sucrose;B73v2_pos=10:85639558;1allele=/GA;version=Hapmap1;RS=rs278931723;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	87379868	87379967	.	+	.	Name=Ear_height;B73v2_pos=10:85640090;1allele=G/A;version=Hapmap2;RS=rs128331820;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	87440471	87440570	.	+	.	Name=Glucose;B73v2_pos=10:85668181;1allele=G/A;version=Hapmap2;RS=rs824367471;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	87451529	87451628	.	+	.	Name=Ear_height;B73v2_pos=10:85679239;1allele=A/C;version=Hapmap2;RS=rs820735751;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	87508206	87508306	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:201577202;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	87670343	87670442	.	+	.	Name=Ear_height;B73v2_pos=10:85855611;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	87732795	87732894	.	+	.	Name=Leaf_width;B73v2_pos=10:85854813;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	87802802	87802901	.	+	.	Name=Glucose;B73v2_pos=10:86016188;1allele=G/A;version=Hapmap2;RS=rs848371694;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	87835751	87835850	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:86038848;1allele=T/C;version=Hapmap2;RS=rs807248808;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	88012668	88012767	.	+	.	Name=Days_to_silk;B73v2_pos=10:86243509;1allele=T/G;version=Hapmap2;RS=rs826761056;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	88071826	88071925	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:86286364;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	88218506	88218605	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86422365;1allele=C/G;version=Hapmap2;RS=rs128332248;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	88228648	88228747	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86432508;1allele=G/C;version=Hapmap2;RS=rs128332268;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	88229825	88229924	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86433685;1allele=T/C;version=Hapmap2;RS=rs1060982798;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	88242146	88242245	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86446012;1allele=G/A;version=Hapmap2;RS=rs278932704;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	88246623	88246722	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86450489;1allele=G/A;version=Hapmap2;RS=rs128583996;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	88258541	88258640	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86462407;1allele=A/T;version=Hapmap2;RS=rs849148172;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	88262300	88262399	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86466166;1allele=C/T;version=Hapmap2;RS=rs827034771;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	88266650	88266749	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:86470516;1allele=A/G;version=Hapmap2;RS=rs128584034;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	88523905	88524004	.	+	.	Name=Glucose;B73v2_pos=10:86739885;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	88671525	88671624	.	+	.	Name=Days_to_silk;B73v2_pos=10:86889861;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	88708529	88708628	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:86927476;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	88708547	88708646	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:86927494;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	88708756	88708855	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:86927703;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	88765609	88765708	.	+	.	Name=Total_amino_acids;B73v2_pos=10:86983882;1allele=A/G;version=Hapmap2;RS=rs278933344;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	88775220	88775319	.	+	.	Name=Leaf_width;B73v2_pos=10:86993494;1allele=G/A;version=Hapmap2;RS=rs817275995;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	88788277	88788376	.	+	.	Name=Leaf_width;B73v2_pos=10:87006551;1allele=G/A;version=Hapmap2;RS=rs827571293;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	88924756	88924855	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:87128915;1allele=A/T;version=Hapmap2;RS=rs131782511;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	88932596	88932695	.	+	.	Name=Leaf_width;B73v2_pos=10:87136520;1allele=A/G;version=Hapmap2;RS=rs826028865;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	88957340	88957439	.	+	.	Name=Total_amino_acids;B73v2_pos=10:87161980;1allele=T/G;version=Hapmap2;RS=rs278933966;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	88967219	88967318	.	+	.	Name=Plant_height;B73v2_pos=10:87171859;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	89064777	89064876	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:87269827;1allele=C/T;version=Hapmap2;RS=rs806133936;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	89082717	89082816	.	+	.	Name=Leaf_width;B73v2_pos=10:87287925;1allele=C/T;version=Hapmap2;RS=rs840547666;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	89099091	89099190	.	+	.	Name=Leaf_width;B73v2_pos=10:87305188;1allele=C/A;version=Hapmap1;RS=rs725484460;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	89138877	89138976	.	+	.	Name=Leaf_width;B73v2_pos=10:87344621;1allele=T/C;version=Hapmap2;RS=rs839832126;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	89139664	89139763	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:87345408;1allele=C/T;version=Hapmap2;RS=rs812243991;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	89160337	89160436	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:87366091;1allele=A/G;version=Hapmap2;RS=rs818192053;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	89175209	89175308	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:87380980;1allele=A/T;version=Hapmap2;RS=rs818565410;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	89321303	89321402	.	+	.	Name=Leaf_width;B73v2_pos=10:87532495;1allele=T/C;version=Hapmap2;RS=rs848880296;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	89520489	89520588	.	+	.	Name=Leaf_width;B73v2_pos=10:87686964;1allele=G/C;version=Hapmap2;RS=rs844395660;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	89521428	89521527	.	+	.	Name=Leaf_width;B73v2_pos=10:87687903;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	89525197	89525296	.	+	.	Name=Leaf_length;B73v2_pos=10:87691672;1allele=AGT/;version=Hapmap1;RS=rs869481383;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	89551480	89551579	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:19214078;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	89648848	89648947	.	+	.	Name=Ear_height;B73v2_pos=10:87808791;1allele=G/A;version=Hapmap2;RS=rs807734731;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	89940333	89940432	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:88121096;1allele=A/C;version=Hapmap2;RS=rs843372686;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	89959446	89959545	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:88140218;1allele=A/G;version=Hapmap2;RS=rs828339002;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	89975452	89975551	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:88156224;1allele=G/A;version=Hapmap2;RS=rs837972809;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	89979138	89979237	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:88159910;1allele=C/T;version=Hapmap2;RS=rs812332192;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	90084427	90084526	.	+	.	Name=Total_amino_acids;B73v2_pos=10:88264842;1allele=C/G;version=Hapmap2;RS=rs812360229;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	90091405	90091504	.	+	.	Name=Leaf_length;B73v2_pos=10:88271821;1allele=A/G;version=Hapmap1;RS=rs131783271;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	90108109	90108208	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:88288525;1allele=G/C;version=Hapmap1;RS=rs131783280;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	90172608	90172707	.	+	.	Name=Leaf_length;B73v2_pos=10:88360633;1allele=A/C;version=Hapmap2;RS=rs822668614;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	90174548	90174647	.	+	.	Name=Plant_height;B73v2_pos=10:88362573;1allele=C/T;version=Hapmap2;RS=rs128586053;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	90228091	90228190	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:16064553;1allele=T/C;version=Hapmap2;RS=rs832462918;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	90336792	90336891	.	+	.	Name=Ear_height;B73v2_pos=10:88538630;1allele=C/T;version=Hapmap2;RS=rs838544663;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	90420835	90420934	.	+	.	Name=Leaf_length;B73v2_pos=10:88617474;1allele=A/G;version=Hapmap2;RS=rs818579056;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	90481432	90481531	.	+	.	Name=Leaf_length;B73v2_pos=10:88675417;1allele=C/G;version=Hapmap2;RS=rs1064181936;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	90529624	90529723	.	+	.	Name=Leaf_length;B73v2_pos=10:88725560;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	90544787	90544886	.	+	.	Name=Plant_height;B73v2_pos=10:88710393;1allele=C/T;version=Hapmap2;RS=rs829653530;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	90580878	90580977	.	+	.	Name=Glutamate;B73v2_pos=7:146630696;1allele=G/A;version=Hapmap2;RS=rs815507547;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	90711200	90711299	.	+	.	Name=Leaf_length;B73v2_pos=10:88909464;1allele=G/C;version=Hapmap2;RS=rs726213811;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	90711592	90711691	.	+	.	Name=Plant_height;B73v2_pos=10:88909856;1allele=C/G;version=Hapmap2;RS=rs727180631;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	90934500	90934599	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:89120596;1allele=A/C;version=Hapmap2;RS=rs832337309;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	91137093	91137192	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:89302225;1allele=G/A;version=Hapmap2;RS=rs724382901;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	91143142	91143241	.	+	.	Name=Ear_height;B73v2_pos=10:89308277;1allele=C/T;version=Hapmap2;RS=rs845504503;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	91245909	91246008	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:89417460;1allele=C/G;version=Hapmap1;RS=rs128586903;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	91363990	91364089	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:89540329;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91363990	91364089	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:89540329;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91376649	91376748	.	+	.	Name=Ear_height;B73v2_pos=10:89552988;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91411900	91411999	.	+	.	Name=Ear_height;B73v2_pos=10:89623890;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91411900	91411999	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:89623890;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91411900	91411999	.	+	.	Name=Plant_height;B73v2_pos=10:89623890;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91466608	91466707	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:89568891;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91566081	91566180	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:89808531;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91580702	91580801	.	+	.	Name=Ear_height;B73v2_pos=10:89793682;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	91947206	91947305	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:90112963;1allele=C/T;version=Hapmap2;RS=rs128587515;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	92063507	92063606	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:12284032;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	92297318	92297417	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:90475667;1allele=A/G;version=Hapmap2;RS=rs823413435;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	92402601	92402700	.	+	.	Name=Ear_height;B73v2_pos=10:90569190;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	92627664	92627763	.	+	.	Name=Ear_height;B73v2_pos=10:90786172;1allele=C/T;version=Hapmap2;RS=rs835428211;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	92648335	92648434	.	+	.	Name=Plant_height;B73v2_pos=10:90806845;1allele=A/G;version=Hapmap2;RS=rs131784401;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	92657941	92658040	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:90816451;1allele=T/C;version=Hapmap2;RS=rs128333708;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	92678587	92678686	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:90837097;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	92712259	92712358	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:90868314;1allele=G/A;version=Hapmap2;RS=rs846997903;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	92773314	92773413	.	+	.	Name=Leaf_width;B73v2_pos=10:90929571;1allele=G/C;version=Hapmap2;RS=rs809508659;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	92849213	92849312	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:91004944;1allele=A/G;version=Hapmap2;RS=rs839345661;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	92928261	92928360	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:91086666;1allele=C/T;version=Hapmap1;RS=rs131784472;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	92938099	92938198	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:91096498;1allele=T/C;version=Hapmap2;RS=rs838009393;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	92940345	92940444	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:91097926;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93320913	93321012	.	+	.	Name=Ear_height;B73v2_pos=10:91472671;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93404711	93404810	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:91591461;1allele=A/G;version=Hapmap2;RS=rs817485847;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	93404711	93404810	.	+	.	Name=Ear_height;B73v2_pos=10:91591461;1allele=A/G;version=Hapmap2;RS=rs817485847;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	93423208	93423307	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:91568151;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93562031	93562130	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:91677466;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93562436	93562535	.	+	.	Name=Plant_height;B73v2_pos=10:91677061;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93575774	93575873	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:91708853;1allele=G/A;version=Hapmap2;RS=rs813138039;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	93575774	93575873	.	+	.	Name=Days_to_silk;B73v2_pos=10:91708853;1allele=G/A;version=Hapmap2;RS=rs813138039;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	93575774	93575873	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:91708853;1allele=G/A;version=Hapmap2;RS=rs813138039;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	93575774	93575873	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:91708853;1allele=G/A;version=Hapmap2;RS=rs813138039;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	93575774	93575873	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:91708853;1allele=G/A;version=Hapmap2;RS=rs813138039;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	93575774	93575873	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:91708853;1allele=G/A;version=Hapmap2;RS=rs813138039;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	93575774	93575873	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:91708853;1allele=G/A;version=Hapmap2;RS=rs813138039;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	93647587	93647686	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:91779772;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93673988	93674087	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:137782672;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93720966	93721065	.	+	.	Name=Ear_height;B73v2_pos=10:91869126;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93733091	93733190	.	+	.	Name=Ear_height;B73v2_pos=10:91856999;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93746207	93746306	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:91877314;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93860974	93861073	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:91925852;1allele=C/A;version=Hapmap2;RS=rs807082281;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	93868630	93868729	.	+	.	Name=Starch;B73v2_pos=10:91933507;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	93904267	93904366	.	+	.	Name=Starch;B73v2_pos=10:91961542;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94077980	94078079	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:92135417;1allele=C/T;version=Hapmap2;RS=rs128590018;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	94079168	94079267	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:92136605;1allele=A/G;version=Hapmap2;RS=rs278938354;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	94094216	94094315	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:92151655;1allele=T/C;version=Hapmap2;RS=rs807188322;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	94095000	94095099	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:92152439;1allele=A/G;version=Hapmap2;RS=rs128590051;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	94120379	94120478	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:92177821;1allele=A/G;version=Hapmap2;RS=rs128590132;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	94190331	94190430	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:92300705;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94193630	94193729	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:92297406;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94193839	94193938	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:92297197;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94384639	94384738	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:92399325;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94384639	94384738	.	+	.	Name=Days_to_silk;B73v2_pos=10:92399325;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94384639	94384738	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:92399325;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94384639	94384738	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:92399325;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94384639	94384738	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:92399325;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94454797	94454896	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:92485813;1allele=C/T;version=Hapmap2;RS=rs836522442;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	94606251	94606350	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:92630824;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94660414	94660513	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:92686800;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94761161	94761260	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:92787778;1allele=T/C;version=Hapmap2;RS=rs841461288;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	94857515	94857614	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:20371425;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	94921625	94921724	.	+	.	Name=Days_to_silk;B73v2_pos=10:92948629;1allele=G/T;version=Hapmap2;RS=rs1064198966;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	94955358	94955457	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:93027448;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95237207	95237306	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:93258545;1allele=C/T;version=Hapmap2;RS=rs821544334;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	95320227	95320326	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:93341955;1allele=A/G;version=Hapmap2;RS=rs836167701;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	95344812	95344911	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:93366006;1allele=G/A;version=Hapmap2;RS=rs846929384;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	95372682	95372781	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:93393755;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95378214	95378313	.	+	.	Name=Ear_height;B73v2_pos=10:93399288;1allele=A/G;version=Hapmap2;RS=rs817921485;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	95397115	95397214	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:44567236;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95512908	95513007	.	+	.	Name=Leaf_width;B73v2_pos=10:93551780;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95642628	95642727	.	+	.	Name=Days_to_silk;B73v2_pos=5:59061345;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95668603	95668702	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:93674119;1allele=C/T;version=Hapmap2;RS=rs823039579;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	95668603	95668702	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:93674119;1allele=C/T;version=Hapmap2;RS=rs823039579;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	95668603	95668702	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:93674119;1allele=C/T;version=Hapmap2;RS=rs823039579;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	95668603	95668702	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:93674119;1allele=C/T;version=Hapmap2;RS=rs823039579;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	95668603	95668702	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:93674119;1allele=C/T;version=Hapmap2;RS=rs823039579;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	95668931	95669030	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:93674447;1allele=C/T;version=Hapmap2;RS=rs802616871;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	95683986	95684085	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:93702017;1allele=G/A;version=Hapmap2;RS=rs814561507;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	95685559	95685658	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:93703590;1allele=C/G;version=Hapmap2;RS=rs834712549;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	95786365	95786464	.	+	.	Name=Leaf_length;B73v2_pos=10:93809270;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95796759	95796858	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:93798866;1allele=G/T;version=Hapmap2;RS=rs1063730458;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	95796770	95796869	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:93798855;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95803930	95804029	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:93829425;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	95832563	95832662	.	+	.	Name=Ear_height;B73v2_pos=10:93837316;1allele=G/A;version=Hapmap2;RS=rs839195509;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	95837867	95837966	.	+	.	Name=Leaf_width;B73v2_pos=10:93842620;1allele=T/A;version=Hapmap2;RS=rs829447326;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	95848837	95848936	.	+	.	Name=Plant_height;B73v2_pos=10:93853869;1allele=C/A;version=Hapmap2;RS=rs841970871;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	95951711	95951810	.	+	.	Name=Cob_diameter;B73v2_pos=10:94027466;1allele=T/A;version=Hapmap2;RS=rs835163179;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	95976576	95976675	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:94052326;1allele=G/A;version=Hapmap2;RS=rs814606023;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	96105515	96105614	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:94184505;1allele=T/G;version=Hapmap2;RS=rs845265272;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	96115592	96115691	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:94194585;1allele=G/A;version=Hapmap2;RS=rs803713110;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	96226277	96226376	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:94307505;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96292751	96292850	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:94369220;1allele=T/C;version=Hapmap2;RS=rs726351813;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	96308225	96308324	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:94420967;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96308225	96308324	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:94420967;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96308225	96308324	.	+	.	Name=Days_to_silk;B73v2_pos=10:94420967;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96308225	96308324	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:94420967;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96308225	96308324	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:94420967;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96433063	96433162	.	+	.	Name=Days_to_silk;B73v2_pos=10:94466455;1allele=C/T;version=Hapmap2;RS=rs822170081;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	96433148	96433247	.	+	.	Name=Days_to_silk;B73v2_pos=10:94466540;1allele=C/T;version=Hapmap2;RS=rs1064388557;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	96491063	96491162	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:94534259;1allele=G/A;version=Hapmap2;RS=rs830195408;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	96491063	96491162	.	+	.	Name=Days_to_silk;B73v2_pos=10:94534259;1allele=G/A;version=Hapmap2;RS=rs830195408;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	96491377	96491476	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:94534573;1allele=A/G;version=Hapmap2;RS=rs803675100;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	96548773	96548872	.	+	.	Name=Leaf_length;B73v2_pos=10:94591979;1allele=G/A;version=Hapmap2;RS=rs827141692;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	96641508	96641607	.	+	.	Name=Plant_height;B73v2_pos=10:94703132;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96735405	96735504	.	+	.	Name=Tassel_length;B73v2_pos=10:94722932;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	96867460	96867559	.	+	.	Name=Leaf_length;B73v2_pos=10:94866071;1allele=A/G;version=Hapmap2;RS=rs817806350;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	96881900	96881999	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:148440371;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97183512	97183611	.	+	.	Name=Leaf_width;B73v2_pos=10:95202666;1allele=T/A;version=Hapmap2;RS=rs826849628;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	97183518	97183617	.	+	.	Name=Leaf_width;B73v2_pos=10:95202672;1allele=A/T;version=Hapmap2;RS=rs809993987;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	97183576	97183675	.	+	.	Name=Leaf_width;B73v2_pos=10:95202730;1allele=A/C;version=Hapmap2;RS=rs836670815;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	97313526	97313625	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:95331071;1allele=A/C;version=Hapmap2;RS=rs840258904;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	97365861	97365960	.	+	.	Name=Total_amino_acids;B73v2_pos=10:95382609;1allele=G/A;version=Hapmap1;RS=rs725941617;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	97366240	97366339	.	+	.	Name=Total_amino_acids;B73v2_pos=10:95382988;1allele=TGAC/;version=Hapmap1;RS=rs845552775;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	97366276	97366375	.	+	.	Name=Total_amino_acids;B73v2_pos=10:95383024;1allele=A/G;version=Hapmap1;RS=rs131786395;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	97366344	97366443	.	+	.	Name=Total_amino_acids;B73v2_pos=10:95383092;1allele=C/G;version=Hapmap2;RS=rs131786398;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	97612358	97612457	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:95627985;1allele=C/T;version=Hapmap2;RS=rs817880123;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	97676311	97676410	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:95692519;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97810219	97810318	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:95925762;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97810219	97810318	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:95925762;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97810219	97810318	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:95925762;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97810219	97810318	.	+	.	Name=Days_to_silk;B73v2_pos=10:95925762;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97810219	97810318	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:95925762;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97810219	97810318	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:95925762;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97810219	97810318	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:95925762;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97822076	97822175	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:95913922;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	97868596	97868695	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:95853014;1allele=G/A;version=Hapmap2;RS=rs841065464;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	97951854	97951953	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:202854077;1allele=C/T;version=Hapmap2;RS=rs808393822;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	98192081	98192180	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:96154036;1allele=T/C;version=Hapmap2;RS=rs829792595;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	98273614	98273713	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:159581789;1allele=C/T;version=Hapmap2;RS=rs820173099;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	98385269	98385368	.	+	.	Name=Ear_height;B73v2_pos=10:96324183;1allele=C/T;version=Hapmap2;RS=rs128593641;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	98630732	98630831	.	+	.	Name=Leaf_length;B73v2_pos=10:96565428;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	98772565	98772664	.	+	.	Name=Total_amino_acids;B73v2_pos=10:96762974;1allele=C/G;version=Hapmap2;RS=rs1061888121;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	99010304	99010403	.	+	.	Name=Total_amino_acids;B73v2_pos=10:96941854;1allele=A/G;version=Hapmap2;RS=rs839163897;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	99120582	99120681	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:97050988;1allele=T/C;version=Hapmap2;RS=rs813162857;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	99497109	99497208	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:97420505;1allele=G/T;version=Hapmap2;RS=rs802166831;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	99549227	99549326	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:97468477;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	99660910	99661009	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:97587029;1allele=A/G;version=Hapmap2;RS=rs810484634;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	99686424	99686523	.	+	.	Name=Leaf_width;B73v2_pos=10:97612648;1allele=A/G;version=Hapmap2;RS=rs839510035;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	99770291	99770390	.	+	.	Name=Days_to_silk;B73v2_pos=10:97695624;1allele=C/A;version=Hapmap2;RS=rs820029807;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	100433108	100433207	.	+	.	Name=Height_above_ear;B73v2_pos=1:71872212;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	100531429	100531528	.	+	.	Name=Total_amino_acids;B73v2_pos=10:98425807;1allele=T/C;version=Hapmap2;RS=rs726350642;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	100542308	100542407	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:98436685;1allele=C/T;version=Hapmap2;RS=rs724527378;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	100559442	100559541	.	+	.	Name=Total_amino_acids;B73v2_pos=10:98452851;1allele=C/T;version=Hapmap2;RS=rs724179390;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	100796543	100796642	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:98678506;1allele=T/A;version=Hapmap2;RS=rs836843875;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	100919443	100919542	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:98801953;1allele=G/T;version=Hapmap2;RS=rs727039524;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	100920109	100920208	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:98802619;1allele=C/T;version=Hapmap2;RS=rs825802817;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	100920557	100920656	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:98803067;1allele=G/A;version=Hapmap2;RS=rs724488737;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	100920609	100920708	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:98803119;1allele=T/G;version=Hapmap2;RS=rs726981087;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	100920830	100920929	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:98803340;1allele=G/A;version=Hapmap2;RS=rs725926274;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	100922289	100922388	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:98804799;1allele=C/T;version=Hapmap2;RS=rs724680547;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	100927831	100927930	.	+	.	Name=Ear_height;B73v2_pos=4:95758918;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	100946079	100946178	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:98828595;1allele=T/C;version=Hapmap2;RS=rs278947818;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	101029715	101029814	.	+	.	Name=Total_amino_acids;B73v2_pos=10:98943413;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	101073562	101073661	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:98957556;1allele=T/C;version=Hapmap2;RS=rs819286850;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	101337149	101337248	.	+	.	Name=Total_amino_acids;B73v2_pos=10:99205040;1allele=G/T;version=Hapmap1;RS=rs128597336;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	101414702	101414801	.	+	.	Name=Leaf_length;B73v2_pos=10:99281633;1allele=G/A;version=Hapmap2;RS=rs804451051;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	101423410	101423509	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:99290341;1allele=T/C;version=Hapmap2;RS=rs811443619;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	101508162	101508261	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:99366512;1allele=T/C;version=Hapmap2;RS=rs843942456;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	101522727	101522826	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:99381120;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	101619302	101619401	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:99473233;1allele=G/T;version=Hapmap1;RS=rs131788459;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	101676756	101676855	.	+	.	Name=Days_to_silk;B73v2_pos=10:99526257;1allele=C/T;version=Hapmap2;RS=rs830083865;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	101676756	101676855	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:99526257;1allele=C/T;version=Hapmap2;RS=rs830083865;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	101676756	101676855	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:99526257;1allele=C/T;version=Hapmap2;RS=rs830083865;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	101699557	101699656	.	+	.	Name=Total_amino_acids;B73v2_pos=10:99549065;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	101738146	101738245	.	+	.	Name=Total_amino_acids;B73v2_pos=10:99586059;1allele=T/C;version=Hapmap2;RS=rs836163547;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	101760639	101760738	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:99608552;1allele=A/G;version=Hapmap2;RS=rs278950918;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	102096371	102096470	.	+	.	Name=Total_amino_acids;B73v2_pos=10:99949363;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	102097465	102097564	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:99950457;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	102246565	102246664	.	+	.	Name=Total_amino_acids;B73v2_pos=10:100039038;1allele=A/C;version=Hapmap2;RS=rs1061989457;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	102726741	102726840	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:100514497;1allele=G/T;version=Hapmap1;RS=rs132578154;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	102766494	102766593	.	+	.	Name=Leaf_width;B73v2_pos=10:100557396;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	102770119	102770218	.	+	.	Name=Ear_height;B73v2_pos=10:100561021;1allele=A/G;version=Hapmap2;RS=rs817036887;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	103005919	103006018	.	+	.	Name=Leaf_width;B73v2_pos=10:100771108;1allele=C/G;version=Hapmap2;RS=rs817733020;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	103550273	103550372	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:101338106;1allele=T/C;version=Hapmap2;RS=rs726129379;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	103574377	103574476	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:101362214;1allele=T/C;version=Hapmap2;RS=rs132578356;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	103605589	103605688	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:101391916;1allele=G/T;version=Hapmap2;RS=rs833532203;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	103625721	103625820	.	+	.	Name=Leaf_width;B73v2_pos=10:101405831;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	103966844	103966943	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:101789384;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	103999461	103999560	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:101759700;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	104136296	104136395	.	+	.	Name=Cob_diameter;B73v2_pos=6:139253142;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	104507675	104507774	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:102284739;1allele=C/A;version=Hapmap2;RS=rs803867798;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	104507675	104507774	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:102284739;1allele=C/A;version=Hapmap2;RS=rs803867798;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	104717687	104717786	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:85394409;1allele=A/G;version=Hapmap2;RS=rs811252480;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	104888018	104888117	.	+	.	Name=Ear_row_number;B73v2_pos=10:102694558;1allele=T/C;version=Hapmap2;RS=rs726935153;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	104923121	104923220	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:102718982;1allele=G/T;version=Hapmap2;RS=rs838775915;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	104928420	104928519	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:102724839;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	104946680	104946779	.	+	.	Name=Total_amino_acids;B73v2_pos=10:102743629;1allele=A/G;version=Hapmap2;RS=rs278954418;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	104961350	104961449	.	+	.	Name=Total_amino_acids;B73v2_pos=10:102757257;1allele=A/G;version=Hapmap2;RS=rs278954430;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	105458145	105458244	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:103255022;1allele=T/C;version=Hapmap2;RS=rs813750358;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	105654232	105654331	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:103499676;1allele=C/T;version=Hapmap2;RS=rs832333453;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	105722843	105722942	.	+	.	Name=Stalk_strength;B73v2_pos=5:175790154;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	106097951	106098037	.	+	.	Name=Starch;B73v2_pos=5:159573217;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	106263558	106263657	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:104077005;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	106871537	106871636	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:104621127;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	107149767	107149866	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:104888427;1allele=G/A;version=Hapmap1;RS=rs131180149;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	107710678	107710777	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:105541214;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	107714260	107714359	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:105537629;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	108135195	108135294	.	+	.	Name=Cob_diameter;B73v2_pos=1:255961450;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	108148338	108148437	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:105876778;1allele=G/C;version=Hapmap1;RS=rs132579805;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	108543074	108543173	.	+	.	Name=Plant_height;B73v2_pos=10:106266444;1allele=C/A;version=Hapmap2;RS=rs829045834;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	108633771	108633870	.	+	.	Name=Ear_height;B73v2_pos=10:106356943;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	108749312	108749411	.	+	.	Name=Days_to_silk;B73v2_pos=10:106481372;1allele=A/G;version=Hapmap2;RS=rs811429230;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	108797797	108797896	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:106527208;1allele=G/A;version=Hapmap2;RS=rs835877301;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	109022226	109022325	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:204395291;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	109192363	109192462	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:106951967;1allele=C/G;version=Hapmap2;RS=rs815013276;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	109207390	109207489	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:106966993;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	109513513	109513612	.	+	.	Name=Stalk_strength;B73v2_pos=4:225976676;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	109890428	109890527	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:7535156;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	110211390	110211489	.	+	.	Name=Days_to_silk;B73v2_pos=3:204769044;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	110250088	110250187	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:107993616;1allele=T/C;version=Hapmap2;RS=rs825267337;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	110273920	110274019	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:108009527;1allele=A/G;version=Hapmap2;RS=rs815540499;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	110306153	110306252	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:108041763;1allele=A/C;version=Hapmap2;RS=rs725612815;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	110372826	110372925	.	+	.	Name=Leaf_length;B73v2_pos=10:108107627;1allele=T/G;version=Hapmap2;RS=rs817373152;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	110378662	110378761	.	+	.	Name=Leaf_length;B73v2_pos=10:108113463;1allele=A/G;version=Hapmap2;RS=rs831675882;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	110493293	110493392	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:108227310;1allele=C/T;version=Hapmap2;RS=rs813643878;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	110494836	110494935	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:108228853;1allele=A/G;version=Hapmap2;RS=rs1062604434;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	110497195	110497294	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:108231212;1allele=A/G;version=Hapmap2;RS=rs850507053;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	110497342	110497441	.	+	.	Name=Leaf_length;B73v2_pos=10:108231359;1allele=G/A;version=Hapmap2;RS=rs835576234;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	110663066	110663165	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:108357077;1allele=G/A;version=Hapmap2;RS=rs810220421;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	110687873	110687972	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:108381705;1allele=A/G;version=Hapmap2;RS=rs132580839;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	110755396	110755495	.	+	.	Name=Leaf_length;B73v2_pos=10:108449235;1allele=G/A;version=Hapmap2;RS=rs278961809;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	111018704	111018803	.	+	.	Name=Total_amino_acids;B73v2_pos=10:108740353;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	111088275	111088374	.	+	.	Name=Starch;B73v2_pos=1:292478598;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	111115322	111115421	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:108789257;1allele=G/A;version=Hapmap2;RS=rs278962080;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	111233976	111234075	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:108908885;1allele=G/A;version=Hapmap2;RS=rs846185747;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	111308705	111308804	.	+	.	Name=Glucose;B73v2_pos=10:108967485;1allele=G/A;version=Hapmap2;RS=rs801882857;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	111348116	111348215	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:109008036;1allele=G/A;version=Hapmap2;RS=rs823503358;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	111470967	111471066	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:109112630;1allele=G/C;version=Hapmap2;RS=rs817345340;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	111625848	111625947	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109251642;1allele=/GACT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	111626722	111626821	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109250768;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	111626977	111627076	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109250513;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	111633446	111633545	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:109244044;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	111725019	111725118	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109345892;1allele=C/T;version=Hapmap2;RS=rs822219352;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	111725144	111725243	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109346017;1allele=T/C;version=Hapmap1;RS=rs132581349;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	111971509	111971608	.	+	.	Name=Leaf_length;B73v2_pos=10:109585929;1allele=A/G;version=Hapmap2;RS=rs278964015;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	111997412	111997511	.	+	.	Name=Starch;B73v2_pos=10:109611832;1allele=C/T;version=Hapmap2;RS=rs811145228;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	112099403	112099502	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:109714040;1allele=G/T;version=Hapmap1;RS=rs132581588;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	112099403	112099502	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:109714040;1allele=G/T;version=Hapmap1;RS=rs132581588;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	112104219	112104318	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:109718856;1allele=A/T;version=Hapmap2;RS=rs132581608;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	112104593	112104692	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109719230;1allele=A/G;version=Hapmap2;RS=rs829715322;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	112104606	112104705	.	+	.	Name=Total_amino_acids;B73v2_pos=10:109719243;1allele=A/T;version=Hapmap1;RS=rs132581616;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	112104757	112104856	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:109719394;1allele=A/G;version=Hapmap2;RS=rs278964187;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	112179374	112179473	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:109796100;1allele=A/G;version=Hapmap2;RS=rs831447380;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	112277098	112277197	.	+	.	Name=Leaf_length;B73v2_pos=10:109893336;1allele=T/C;version=Hapmap2;RS=rs724353811;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	112522211	112522310	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:977670;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	112600722	112600821	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:110223315;1allele=T/C;version=Hapmap2;RS=rs801633568;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	112616158	112616257	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:110241316;1allele=A/T;version=Hapmap2;RS=rs803943330;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	112619897	112619996	.	+	.	Name=Glucose;B73v2_pos=10:110245055;1allele=C/T;version=Hapmap2;RS=rs819186903;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	112677453	112677552	.	+	.	Name=Sucrose;B73v2_pos=10:110299822;1allele=T/C;version=Hapmap2;RS=rs835704368;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	112788867	112788966	.	+	.	Name=Leaf_length;B73v2_pos=3:214034479;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	112805177	112805276	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:226829181;1allele=C/T;version=Hapmap2;RS=rs846978378;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	113249680	113249779	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:110830043;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113269071	113269170	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:110810651;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113459880	113459979	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:111063558;1allele=T/C;version=Hapmap2;RS=rs806585303;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	113677189	113677288	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:111274887;1allele=G/A;version=Hapmap2;RS=rs802848396;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	113887513	113887612	.	+	.	Name=Total_amino_acids;B73v2_pos=10:111512478;1allele=T/A;version=Hapmap2;RS=rs839595571;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	113905593	113905692	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:111497004;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113919721	113919820	.	+	.	Name=Total_amino_acids;B73v2_pos=10:111503599;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113924216	113924315	.	+	.	Name=Total_amino_acids;B73v2_pos=10:111490352;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113924237	113924336	.	+	.	Name=Total_amino_acids;B73v2_pos=10:111490331;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113948889	113948988	.	+	.	Name=Total_amino_acids;B73v2_pos=10:111547803;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113953070	113953169	.	+	.	Name=Total_amino_acids;B73v2_pos=10:111557148;1allele=A/C;version=Hapmap2;RS=rs847805974;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	113957975	113958074	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:111552243;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	113966354	113966453	.	+	.	Name=Total_amino_acids;B73v2_pos=10:111562453;1allele=C/T;version=Hapmap2;RS=rs278966567;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	114267417	114267516	.	+	.	Name=Days_to_silk;B73v2_pos=10:111858421;1allele=A/G;version=Hapmap2;RS=rs805617261;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	114466674	114466773	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:112058932;1allele=C/A;version=Hapmap2;RS=rs803145689;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	114780815	114780914	.	+	.	Name=Total_amino_acids;B73v2_pos=10:112359620;1allele=C/T;version=Hapmap2;RS=rs132582765;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	114903764	114903863	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:112483055;1allele=A/G;version=Hapmap2;RS=rs836442596;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	115051108	115051207	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:112627756;1allele=A/T;version=Hapmap2;RS=rs826243479;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	115223015	115223114	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:112807429;1allele=C/A;version=Hapmap2;RS=rs814202777;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	115328945	115329044	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:112907739;1allele=C/T;version=Hapmap2;RS=rs804795338;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	115365741	115365840	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:112941576;1allele=C/T;version=Hapmap2;RS=rs847627091;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	115420824	115420923	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:112996663;1allele=C/G;version=Hapmap2;RS=rs825359523;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	115452167	115452266	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:113027911;1allele=G/A;version=Hapmap2;RS=rs818893312;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	115581324	115581423	.	+	.	Name=Ear_height;B73v2_pos=10:113168530;1allele=T/C;version=Hapmap2;RS=rs278970473;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	115619390	115619489	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:214636497;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	115700652	115700751	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:113286614;1allele=C/T;version=Hapmap2;RS=rs811274622;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	115715405	115715504	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:113301367;1allele=C/T;version=Hapmap2;RS=rs804404944;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	115737249	115737348	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:113323070;1allele=A/G;version=Hapmap2;RS=rs128606834;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	115737271	115737370	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:113323092;1allele=A/G;version=Hapmap2;RS=rs278970759;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	115767621	115767720	.	+	.	Name=Tassel_length;B73v2_pos=10:113350411;1allele=A/T;version=Hapmap2;RS=rs818113309;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	115792029	115792128	.	+	.	Name=Tassel_length;B73v2_pos=10:113407312;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	116005295	116005394	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:113551782;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	116110373	116110472	.	+	.	Name=Nitrate;B73v2_pos=10:113602257;1allele=C/T;version=Hapmap2;RS=rs845117353;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	116173784	116173883	.	+	.	Name=Sucrose;B73v2_pos=10:113654763;1allele=T/A;version=Hapmap2;RS=rs844070544;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	116209521	116209620	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:113708887;1allele=G/A;version=Hapmap2;RS=rs837572240;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	116297187	116297286	.	+	.	Name=Leaf_width;B73v2_pos=10:113796372;1allele=C/T;version=Hapmap2;RS=rs822077629;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	116332804	116332903	.	+	.	Name=Ear_row_number;B73v2_pos=10:113831985;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	116491575	116491674	.	+	.	Name=Ear_height;B73v2_pos=10:113983303;1allele=A/C;version=Hapmap2;RS=rs842033323;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	116632776	116632875	.	+	.	Name=Ear_row_number;B73v2_pos=10:114112851;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	116632790	116632889	.	+	.	Name=Ear_row_number;B73v2_pos=10:114112837;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	116655331	116655430	.	+	.	Name=Ear_row_number;B73v2_pos=10:114137059;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	116762501	116762600	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:114243760;1allele=T/A;version=Hapmap2;RS=rs843502887;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	117065094	117065193	.	+	.	Name=Total_amino_acids;B73v2_pos=10:114530283;1allele=G/A;version=Hapmap2;RS=rs278973039;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	117067675	117067774	.	+	.	Name=Leaf_length;B73v2_pos=10:114532864;1allele=T/C;version=Hapmap1;RS=rs132584450;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	117069382	117069481	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:114534571;1allele=G/A;version=Hapmap2;RS=rs834246989;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	117146166	117146265	.	+	.	Name=Tassel_length;B73v2_pos=10:114621805;1allele=A/C;version=Hapmap2;RS=rs846865598;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	117181301	117181400	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:114657395;1allele=T/C;version=Hapmap2;RS=rs1061420255;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	117417231	117417330	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:114885957;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	117457113	117457212	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:114918398;1allele=A/G;version=Hapmap2;RS=rs810565096;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	117563539	117563638	.	+	.	Name=Ear_row_number;B73v2_pos=10:115020186;1allele=C/T;version=Hapmap2;RS=rs845056730;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	117586236	117586335	.	+	.	Name=Starch;B73v2_pos=6:129658453;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	117690544	117690643	.	+	.	Name=Leaf_length;B73v2_pos=10:115142532;1allele=C/T;version=Hapmap2;RS=rs846996516;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	117887007	117887106	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:115343255;1allele=T/G;version=Hapmap2;RS=rs833346788;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	118074861	118074960	.	+	.	Name=Plant_height;B73v2_pos=10:115532689;1allele=A/G;version=Hapmap2;RS=rs813918388;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	118087740	118087839	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:197445492;1allele=G/A;version=Hapmap2;RS=rs1063685005;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	118112057	118112156	.	+	.	Name=Tassel_length;B73v2_pos=10:115569883;1allele=C/T;version=Hapmap2;RS=rs128341327;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	118117252	118117351	.	+	.	Name=Tassel_length;B73v2_pos=10:115574952;1allele=T/C;version=Hapmap2;RS=rs278974122;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	118117307	118117406	.	+	.	Name=Tassel_length;B73v2_pos=10:115575007;1allele=C/A;version=Hapmap2;RS=rs128608852;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	118118874	118118973	.	+	.	Name=Tassel_length;B73v2_pos=10:115576574;1allele=A/G;version=Hapmap2;RS=rs128608863;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	118118910	118119009	.	+	.	Name=Leaf_length;B73v2_pos=10:115576610;1allele=C/T;version=Hapmap2;RS=rs128608864;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	118122197	118122296	.	+	.	Name=Tassel_length;B73v2_pos=10:115579897;1allele=A/G;version=Hapmap2;RS=rs824271799;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	118160945	118161044	.	+	.	Name=Tassel_length;B73v2_pos=10:115618651;1allele=C/G;version=Hapmap2;RS=rs128609030;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	118225927	118226026	.	+	.	Name=Ear_row_number;B73v2_pos=10:115683226;1allele=A/G;version=Hapmap2;RS=rs822437869;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	118454323	118454422	.	+	.	Name=Tassel_length;B73v2_pos=7:127284357;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	118498815	118498914	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:115921613;1allele=G/T;version=Hapmap2;RS=rs725595511;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	118522287	118522386	.	+	.	Name=Tassel_length;B73v2_pos=10:115945085;1allele=G/T;version=Hapmap2;RS=rs128609527;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	118522777	118522876	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:115945575;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	118621070	118621169	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:116043610;1allele=T/C;version=Hapmap2;RS=rs802602369;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	118711487	118711586	.	+	.	Name=Ear_row_number;B73v2_pos=10:116133639;1allele=G/A;version=Hapmap2;RS=rs840190817;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	118717104	118717203	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:116139256;1allele=T/G;version=Hapmap2;RS=rs832309639;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	118803092	118803191	.	+	.	Name=Leaf_length;B73v2_pos=10:116227342;1allele=T/A;version=Hapmap1;RS=rs132585392;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	118873428	118873527	.	+	.	Name=Tassel_length;B73v2_pos=10:116297672;1allele=C/A;version=Hapmap2;RS=rs802428191;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	119040485	119040584	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:116465310;1allele=C/T;version=Hapmap2;RS=rs724160415;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	119044337	119044436	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:116469452;1allele=T/C;version=Hapmap2;RS=rs809334918;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	119045995	119046094	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:116471110;1allele=A/G;version=Hapmap2;RS=rs808561237;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	119074748	119074847	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:116498129;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	119099897	119099996	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:116522714;1allele=G/A;version=Hapmap2;RS=rs807761727;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	119117163	119117262	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:116539980;1allele=C/T;version=Hapmap2;RS=rs832849612;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	119181486	119181585	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:116605147;1allele=G/T;version=Hapmap2;RS=rs833218412;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	119260300	119260399	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:116683989;1allele=A/G;version=Hapmap2;RS=rs835242260;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	119321740	119321839	.	+	.	Name=Sucrose;B73v2_pos=10:116764836;1allele=T/C;version=Hapmap2;RS=rs810043316;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	119329183	119329282	.	+	.	Name=Leaf_length;B73v2_pos=10:116772279;1allele=T/G;version=Hapmap2;RS=rs802404107;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	119329211	119329310	.	+	.	Name=Leaf_length;B73v2_pos=10:116772307;1allele=G/A;version=Hapmap2;RS=rs837174515;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	119361085	119361184	.	+	.	Name=Leaf_length;B73v2_pos=10:116784504;1allele=G/C;version=Hapmap2;RS=rs821723083;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	119418084	119418183	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:22306807;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	119430501	119430600	.	+	.	Name=Starch;B73v2_pos=10:116855950;1allele=A/G;version=Hapmap2;RS=rs727219306;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	119556323	119556422	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:116976060;1allele=A/G;version=Hapmap2;RS=rs818620568;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	119595808	119595907	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:117019640;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	119595808	119595907	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:117019640;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	119597214	119597313	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:117021046;1allele=T/G;version=Hapmap2;RS=rs840435891;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	119646812	119646911	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:117063513;1allele=T/A;version=Hapmap2;RS=rs833401958;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	119665123	119665222	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:197583086;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	119908168	119908267	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:117320032;1allele=/ACGT;version=Hapmap1;RS=rs826333270;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	119917449	119917548	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:117329313;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	119918304	119918403	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:117330168;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	119969579	119969678	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:117393562;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120067554	120067653	.	+	.	Name=Leaf_width;B73v2_pos=10:117448875;1allele=T/A;version=Hapmap2;RS=rs802882441;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	120072280	120072379	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:117453601;1allele=G/A;version=Hapmap2;RS=rs804326232;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	120091660	120091759	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:117477181;1allele=G/C;version=Hapmap2;RS=rs823910165;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	120122737	120122836	.	+	.	Name=Days_to_silk;B73v2_pos=10:117530963;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120175142	120175241	.	+	.	Name=Tassel_length;B73v2_pos=10:117571723;1allele=C/A;version=Hapmap1;RS=rs132586301;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	120177273	120177372	.	+	.	Name=Tassel_length;B73v2_pos=10:117573854;1allele=G/A;version=Hapmap2;RS=rs278975933;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	120183606	120183705	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:117580189;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120193288	120193387	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:117589872;1allele=G/A;version=Hapmap2;RS=rs849402696;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	120194548	120194647	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:117591132;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120198749	120198848	.	+	.	Name=Days_to_silk;B73v2_pos=10:117595333;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120232065	120232164	.	+	.	Name=Ear_row_number;B73v2_pos=10:117614382;1allele=G/T;version=Hapmap2;RS=rs811339154;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	120279275	120279374	.	+	.	Name=Ear_row_number;B73v2_pos=10:117659916;1allele=C/T;version=Hapmap2;RS=rs726219800;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	120345332	120345431	.	+	.	Name=Tassel_length;B73v2_pos=10:117725974;1allele=A/G;version=Hapmap2;RS=rs278976131;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	120346775	120346874	.	+	.	Name=Tassel_length;B73v2_pos=10:117727417;1allele=T/G;version=Hapmap2;RS=rs803137908;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	120376916	120377015	.	+	.	Name=Ear_height;B73v2_pos=10:117757899;1allele=C/T;version=Hapmap1;RS=rs132586636;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	120376936	120377035	.	+	.	Name=Ear_height;B73v2_pos=10:117757919;1allele=T/A;version=Hapmap2;RS=rs132586637;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	120418314	120418413	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:117797037;1allele=C/G;version=Hapmap2;RS=rs816010598;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	120418672	120418771	.	+	.	Name=Plant_height;B73v2_pos=10:117797395;1allele=G/A;version=Hapmap2;RS=rs844629803;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	120481732	120481831	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:117856373;1allele=G/A;version=Hapmap2;RS=rs824780678;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	120481735	120481834	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:117856376;1allele=T/C;version=Hapmap2;RS=rs829086103;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	120486637	120486736	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:117861071;1allele=A/G;version=Hapmap2;RS=rs831635409;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	120512797	120512896	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:117887233;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120512797	120512896	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:117887233;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120520487	120520586	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:117895562;1allele=A/T;version=Hapmap2;RS=rs825209347;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	120524180	120524279	.	+	.	Name=Ear_height;B73v2_pos=10:117899255;1allele=T/C;version=Hapmap2;RS=rs278976393;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	120524480	120524579	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:117899555;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	120527498	120527597	.	+	.	Name=Tassel_length;B73v2_pos=10:117902573;1allele=G/T;version=Hapmap1;RS=rs132586819;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	120527678	120527777	.	+	.	Name=Tassel_length;B73v2_pos=10:117902753;1allele=T/A;version=Hapmap2;RS=rs278976421;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	120542222	120542321	.	+	.	Name=Tassel_length;B73v2_pos=10:117917300;1allele=T/C;version=Hapmap2;RS=rs810615960;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	120543233	120543332	.	+	.	Name=Tassel_length;B73v2_pos=10:117918311;1allele=G/A;version=Hapmap2;RS=rs848532730;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	120545113	120545212	.	+	.	Name=Tassel_length;B73v2_pos=10:117920191;1allele=A/G;version=Hapmap2;RS=rs278976457;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	120613882	120613981	.	+	.	Name=Leaf_length;B73v2_pos=10:117988970;1allele=T/C;version=Hapmap2;RS=rs278976624;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	121009533	121009632	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:118369635;1allele=CGA/;version=Hapmap1;RS=rs840101123;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	121014535	121014634	.	+	.	Name=Tassel_length;B73v2_pos=10:118374637;1allele=A/C;version=Hapmap2;RS=rs1060910354;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	121206323	121206422	.	+	.	Name=Ear_row_number;B73v2_pos=10:118565270;1allele=A/G;version=Hapmap2;RS=rs847767352;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	121417862	121417961	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:118767845;1allele=C/T;version=Hapmap2;RS=rs810138942;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	121482854	121482953	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:118839789;1allele=A/G;version=Hapmap2;RS=rs841367099;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	121482994	121483093	.	+	.	Name=Ear_row_number;B73v2_pos=10:118839929;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	121588373	121588472	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:118950143;1allele=A/T;version=Hapmap2;RS=rs837686396;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	121601186	121601285	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:155367524;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	121611833	121611932	.	+	.	Name=Days_to_silk;B73v2_pos=10:118970505;1allele=A/C;version=Hapmap2;RS=rs810123596;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	121634950	121635049	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:118990810;1allele=C/T;version=Hapmap2;RS=rs845315246;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	121635462	121635561	.	+	.	Name=Tassel_length;B73v2_pos=10:118991322;1allele=C/G;version=Hapmap2;RS=rs132587381;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	121639111	121639210	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:118994971;1allele=A/G;version=Hapmap2;RS=rs840472299;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	121667750	121667849	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:119012360;1allele=G/A;version=Hapmap2;RS=rs808120274;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	121678039	121678138	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:119022649;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	121679162	121679261	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:119023772;1allele=A/T;version=Hapmap2;RS=rs802335059;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	121679162	121679261	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:119023772;1allele=A/T;version=Hapmap2;RS=rs802335059;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	121686396	121686495	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:119031011;1allele=T/C;version=Hapmap2;RS=rs832318974;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	121686396	121686495	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:119031011;1allele=T/C;version=Hapmap2;RS=rs832318974;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	121720738	121720837	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:119063334;1allele=C/T;version=Hapmap2;RS=rs842910160;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	121720738	121720837	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:119063334;1allele=C/T;version=Hapmap2;RS=rs842910160;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	121743949	121744048	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:119095104;1allele=T/C;version=Hapmap2;RS=rs132587626;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	121752813	121752912	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:119103968;1allele=T/C;version=Hapmap2;RS=rs828348680;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	121752892	121752991	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:119104047;1allele=A/G;version=Hapmap2;RS=rs802047093;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	121753095	121753194	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:119104250;1allele=G/T;version=Hapmap2;RS=rs839360282;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	121753095	121753194	.	+	.	Name=Plant_height;B73v2_pos=10:119104250;1allele=G/T;version=Hapmap2;RS=rs839360282;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	121780743	121780842	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:119125471;1allele=C/T;version=Hapmap2;RS=rs831294929;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	121781231	121781330	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:119125959;1allele=C/A;version=Hapmap2;RS=rs844576284;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	121855677	121855776	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:119190706;1allele=T/G;version=Hapmap2;RS=rs840014654;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	122096456	122096555	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:119522967;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	122245476	122245575	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:119631866;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	122253386	122253485	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:134886643;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	122448174	122448273	.	+	.	Name=Ear_height;B73v2_pos=10:119832516;1allele=T/C;version=Hapmap2;RS=rs848737719;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	123164360	123164459	.	+	.	Name=Ear_row_number;B73v2_pos=10:120539562;1allele=A/G;version=Hapmap2;RS=rs844255472;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	123190095	123190194	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:93748383;1allele=G/T;version=Hapmap2;RS=rs813357610;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	123224807	123224906	.	+	.	Name=Plant_height;B73v2_pos=10:120600025;1allele=C/T;version=Hapmap2;RS=rs830501757;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	123269598	123269697	.	+	.	Name=Tassel_length;B73v2_pos=10:120644818;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	123309358	123309457	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:120671551;1allele=G/C;version=Hapmap2;RS=rs132588583;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	123309358	123309457	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:120671551;1allele=G/C;version=Hapmap2;RS=rs132588583;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	123334007	123334106	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:120698895;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	123371353	123371452	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:120728291;1allele=T/C;version=Hapmap2;RS=rs1062181443;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	123490944	123491043	.	+	.	Name=Ear_row_number;B73v2_pos=10:120838787;1allele=G/A;version=Hapmap2;RS=rs278982397;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	123500809	123500908	.	+	.	Name=Ear_row_number;B73v2_pos=10:120848254;1allele=G/A;version=Hapmap2;RS=rs804459340;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	123501459	123501558	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:120848904;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	123568912	123569011	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:120941989;1allele=C/T;version=Hapmap1;RS=rs132588866;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	123716576	123716675	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:121068212;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	123786662	123786761	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:121106530;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	123789611	123789710	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:121103581;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	123849009	123849108	.	+	.	Name=Plant_height;B73v2_pos=10:121208708;1allele=C/T;version=Hapmap2;RS=rs831134315;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	123945706	123945805	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:121274842;1allele=A/G;version=Hapmap2;RS=rs128343081;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	123949782	123949881	.	+	.	Name=Ear_row_number;B73v2_pos=10:121278918;1allele=A/G;version=Hapmap2;RS=rs814864129;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	123958311	123958410	.	+	.	Name=Ear_row_number;B73v2_pos=10:121287447;1allele=/AC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	124061529	124061628	.	+	.	Name=Ear_row_number;B73v2_pos=10:121411555;1allele=A/G;version=Hapmap2;RS=rs813280436;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	124064964	124065063	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:121414990;1allele=A/G;version=Hapmap2;RS=rs824229650;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	124067976	124068075	.	+	.	Name=Ear_row_number;B73v2_pos=10:121418002;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	124159090	124159189	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:121510009;1allele=A/G;version=Hapmap2;RS=rs128615662;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	124856858	124856957	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:122251590;1allele=A/G;version=Hapmap2;RS=rs812070014;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	125066856	125066955	.	+	.	Name=Plant_height;B73v2_pos=10:122462751;1allele=T/C;version=Hapmap2;RS=rs820086694;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	125193707	125193806	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:122589851;1allele=T/C;version=Hapmap2;RS=rs1063044510;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	125323057	125323156	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:164163639;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	125429816	125429915	.	+	.	Name=Nitrate;B73v2_pos=10:122821836;1allele=T/C;version=Hapmap2;RS=rs826171624;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	125583749	125583848	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:122973059;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	125895430	125895529	.	+	.	Name=Leaf_length;B73v2_pos=10:123346351;1allele=T/C;version=Hapmap2;RS=rs846056026;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	126209583	126209682	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:123624273;1allele=G/A;version=Hapmap2;RS=rs128618578;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	126387849	126387948	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:123827939;1allele=T/C;version=Hapmap2;RS=rs278985414;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	126415520	126415619	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:123855614;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	126442554	126442653	.	+	.	Name=Ear_height;B73v2_pos=10:123882679;1allele=A/G;version=Hapmap2;RS=rs811441406;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	126442567	126442666	.	+	.	Name=Ear_height;B73v2_pos=10:123882692;1allele=C/T;version=Hapmap2;RS=rs818700349;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	126443524	126443623	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:123883649;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	126513022	126513121	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:123943017;1allele=C/A;version=Hapmap2;RS=rs834711878;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	126514817	126514916	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=10:123944812;1allele=C/G;version=Hapmap2;RS=rs128619101;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	126515534	126515633	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:123945529;1allele=G/A;version=Hapmap2;RS=rs278985632;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	126515537	126515636	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:123945532;1allele=T/C;version=Hapmap2;RS=rs847542067;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	126517214	126517313	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:123947209;1allele=A/T;version=Hapmap2;RS=rs278985670;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	126518690	126518789	.	+	.	Name=Plant_height;B73v2_pos=10:123948685;1allele=A/T;version=Hapmap2;RS=rs827472565;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	126530753	126530852	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:123960827;1allele=G/A;version=Hapmap2;RS=rs278985762;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	126616448	126616547	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:124060778;1allele=T/C;version=Hapmap2;RS=rs813798534;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	126625948	126626047	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:124070278;1allele=C/T;version=Hapmap2;RS=rs841268831;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	126675537	126675636	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208504539;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	126727153	126727252	.	+	.	Name=Plant_height;B73v2_pos=10:124191272;1allele=A/C;version=Hapmap2;RS=rs849270905;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	126727153	126727252	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:124191272;1allele=A/C;version=Hapmap2;RS=rs849270905;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	126765635	126765734	.	+	.	Name=Plant_height;B73v2_pos=10:124229324;1allele=C/T;version=Hapmap2;RS=rs278986120;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	126900032	126900131	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:124344515;1allele=A/G;version=Hapmap2;RS=rs278986418;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	126964190	126964289	.	+	.	Name=Ear_row_number;B73v2_pos=10:124393036;1allele=T/C;version=Hapmap2;RS=rs809200957;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	127265866	127265965	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:124664816;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	127266188	127266287	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:124664494;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	127297790	127297889	.	+	.	Name=Ear_height;B73v2_pos=10:124732094;1allele=G/C;version=Hapmap2;RS=rs128620303;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	127591288	127591387	.	+	.	Name=Ear_row_number;B73v2_pos=10:125096930;1allele=G/A;version=Hapmap2;RS=rs128344545;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	127658506	127658605	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4059044;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	127738370	127738469	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:125236355;1allele=C/T;version=Hapmap2;RS=rs815166993;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	127887607	127887706	.	+	.	Name=Ear_height;B73v2_pos=10:125386820;1allele=T/C;version=Hapmap2;RS=rs846283552;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	127887607	127887706	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:125386820;1allele=T/C;version=Hapmap2;RS=rs846283552;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	128040208	128040307	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:125538437;1allele=C/A;version=Hapmap2;RS=rs849175166;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	128043324	128043423	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:125541553;1allele=A/G;version=Hapmap2;RS=rs808289211;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	128043779	128043878	.	+	.	Name=Ear_row_number;B73v2_pos=10:125542008;1allele=A/G;version=Hapmap2;RS=rs810075638;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	128059577	128059676	.	+	.	Name=Plant_height;B73v2_pos=10:125557803;1allele=A/G;version=Hapmap2;RS=rs846335938;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	128076389	128076488	.	+	.	Name=Ear_height;B73v2_pos=10:125574620;1allele=A/T;version=Hapmap2;RS=rs278988203;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	128110109	128110208	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:125638619;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	128193065	128193164	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:125705910;1allele=C/T;version=Hapmap2;RS=rs809562967;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	128456512	128456611	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:125968592;1allele=A/C;version=Hapmap2;RS=rs830847484;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	128818604	128818703	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:164042330;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	128975781	128975880	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:126464964;1allele=G/A;version=Hapmap2;RS=rs829083924;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	128976579	128976678	.	+	.	Name=Ear_height;B73v2_pos=10:126465762;1allele=T/C;version=Hapmap2;RS=rs816950987;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	129003852	129003951	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:126494539;1allele=C/T;version=Hapmap2;RS=rs128621883;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	129162476	129162575	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:126655639;1allele=G/T;version=Hapmap2;RS=rs821554481;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	129174179	129174278	.	+	.	Name=Plant_height;B73v2_pos=10:126667344;1allele=A/G;version=Hapmap2;RS=rs846776360;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	129174179	129174278	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:126667344;1allele=A/G;version=Hapmap2;RS=rs846776360;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	129188655	129188754	.	+	.	Name=Ear_height;B73v2_pos=10:126681820;1allele=G/C;version=Hapmap2;RS=rs845471265;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	129194510	129194609	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:126685868;1allele=C/T;version=Hapmap2;RS=rs831875691;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	129197002	129197101	.	+	.	Name=Leaf_length;B73v2_pos=10:126688360;1allele=+/-;version=Hapmap2;RS=rs843095608;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	129211161	129211260	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:126702523;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129389692	129389791	.	+	.	Name=Ear_height;B73v2_pos=10:126870043;1allele=C/T;version=Hapmap2;RS=rs830602521;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	129389692	129389791	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:126870043;1allele=C/T;version=Hapmap2;RS=rs830602521;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	129412975	129413074	.	+	.	Name=Ear_row_number;B73v2_pos=10:126893326;1allele=C/G;version=Hapmap2;RS=rs724394723;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	129414550	129414649	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:126894901;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129415500	129415599	.	+	.	Name=Leaf_length;B73v2_pos=10:126895851;1allele=T/C;version=Hapmap2;RS=rs835310475;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	129415793	129415892	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:126896144;1allele=T/C;version=Hapmap2;RS=rs278989551;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	129415795	129415894	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:126896146;1allele=G/C;version=Hapmap2;RS=rs834171663;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	129555326	129555425	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:127028861;1allele=G/A;version=Hapmap2;RS=rs803801114;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	129746991	129747090	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:127270569;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129747355	129747454	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:127270205;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129755662	129755761	.	+	.	Name=Leaf_width;B73v2_pos=10:127261897;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129758669	129758768	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:127258890;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129758669	129758768	.	+	.	Name=Plant_height;B73v2_pos=10:127258890;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129777673	129777772	.	+	.	Name=Starch;B73v2_pos=10:127240342;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129885052	129885151	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:127370897;1allele=C/T;version=Hapmap1;RS=rs847241605;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	129885168	129885267	.	+	.	Name=Ear_height;B73v2_pos=10:127371013;1allele=G/C;version=Hapmap1;RS=rs132593741;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	129937784	129937883	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:127423970;1allele=A/G;version=Hapmap2;RS=rs132593808;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	129938248	129938347	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:127424434;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	129948514	129948613	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:127434700;1allele=A/G;version=Hapmap2;RS=rs841445186;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	129960991	129961090	.	+	.	Name=Plant_height;B73v2_pos=10:127441514;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	130042594	130042693	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:127523136;1allele=G/C;version=Hapmap1;RS=rs132593861;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	130042647	130042746	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:127523189;1allele=C/T;version=Hapmap1;RS=rs132593862;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	130046726	130046825	.	+	.	Name=Plant_height;B73v2_pos=10:127527263;1allele=T/C;version=Hapmap2;RS=rs128623073;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	130050044	130050143	.	+	.	Name=Plant_height;B73v2_pos=10:127530580;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	130050044	130050143	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:127530580;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	130062163	130062262	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:127542699;1allele=A/C;version=Hapmap2;RS=rs826143888;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	130062730	130062829	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:127543266;1allele=C/G;version=Hapmap2;RS=rs826047459;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	130109683	130109782	.	+	.	Name=Plant_height;B73v2_pos=10:127590842;1allele=G/A;version=Hapmap2;RS=rs848335961;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	130110947	130111046	.	+	.	Name=Ear_row_number;B73v2_pos=10:127592106;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	130117608	130117707	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:127598767;1allele=G/A;version=Hapmap1;RS=rs132594045;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	130127418	130127517	.	+	.	Name=Plant_height;B73v2_pos=10:127608577;1allele=G/T;version=Hapmap2;RS=rs128345277;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	130212991	130213090	.	+	.	Name=Ear_height;B73v2_pos=10:127693919;1allele=G/A;version=Hapmap2;RS=rs836877503;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	130257716	130257815	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:127738656;1allele=A/G;version=Hapmap2;RS=rs850168649;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	130364648	130364747	.	+	.	Name=Leaf_width;B73v2_pos=10:127829755;1allele=C/G;version=Hapmap2;RS=rs834111250;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	130369345	130369444	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:127834452;1allele=G/A;version=Hapmap2;RS=rs829278633;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	130370463	130370562	.	+	.	Name=Ear_height;B73v2_pos=10:127835570;1allele=G/T;version=Hapmap2;RS=rs846477000;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	130378853	130378952	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:127843961;1allele=C/T;version=Hapmap2;RS=rs812262561;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	130410711	130410810	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:127873267;1allele=A/G;version=Hapmap2;RS=rs278990422;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	130456920	130457019	.	+	.	Name=Ear_height;B73v2_pos=10:127919127;1allele=T/A;version=Hapmap2;RS=rs820940905;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	130516009	130516108	.	+	.	Name=Ear_height;B73v2_pos=10:127978181;1allele=T/C;version=Hapmap2;RS=rs278990670;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	130516318	130516417	.	+	.	Name=Ear_height;B73v2_pos=10:127978490;1allele=T/C;version=Hapmap2;RS=rs838390778;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	130516585	130516684	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:127978757;1allele=C/T;version=Hapmap2;RS=rs837320871;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	130565508	130565607	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:275195725;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	130584040	130584139	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:70375722;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	130753336	130753435	.	+	.	Name=Ear_height;B73v2_pos=10:128216227;1allele=G/A;version=Hapmap2;RS=rs828272013;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	130773575	130773674	.	+	.	Name=Ear_height;B73v2_pos=10:128236472;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	130813956	130814055	.	+	.	Name=Leaf_length;B73v2_pos=10:128324014;1allele=G/A;version=Hapmap2;RS=rs278991257;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	131067249	131067348	.	+	.	Name=Plant_height;B73v2_pos=10:128561847;1allele=T/C;version=Hapmap2;RS=rs845684469;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	131085950	131086049	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:134836209;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	131128063	131128162	.	+	.	Name=Plant_height;B73v2_pos=10:128660888;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	131203122	131203221	.	+	.	Name=Leaf_width;B73v2_pos=10:128697629;1allele=C/T;version=Hapmap2;RS=rs801522502;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	131226664	131226763	.	+	.	Name=Leaf_width;B73v2_pos=10:128721172;1allele=C/T;version=Hapmap2;RS=rs837164548;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	131231345	131231444	.	+	.	Name=Ear_height;B73v2_pos=10:128725854;1allele=G/A;version=Hapmap2;RS=rs839661723;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	131237586	131237685	.	+	.	Name=Leaf_width;B73v2_pos=10:128732096;1allele=+/-;version=Hapmap2;RS=rs826843952;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	131317155	131317254	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:128794426;1allele=T/C;version=Hapmap2;RS=rs278992591;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	131330197	131330296	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:128842400;1allele=G/A;version=Hapmap2;RS=rs801982746;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	131413372	131413471	.	+	.	Name=Ear_height;B73v2_pos=10:128871516;1allele=T/C;version=Hapmap2;RS=rs825599295;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	131472028	131472127	.	+	.	Name=Ear_height;B73v2_pos=10:128947086;1allele=A/G;version=Hapmap2;RS=rs806228876;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	131472028	131472127	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:128947086;1allele=A/G;version=Hapmap2;RS=rs806228876;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	131472032	131472131	.	+	.	Name=Ear_height;B73v2_pos=10:128947090;1allele=A/G;version=Hapmap2;RS=rs836998833;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	131472063	131472162	.	+	.	Name=Ear_height;B73v2_pos=10:128947121;1allele=C/T;version=Hapmap2;RS=rs840013473;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	131472916	131473015	.	+	.	Name=Ear_height;B73v2_pos=10:128947974;1allele=A/C;version=Hapmap2;RS=rs843567278;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	131472963	131473062	.	+	.	Name=Ear_height;B73v2_pos=10:128948021;1allele=A/T;version=Hapmap2;RS=rs1061151785;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	131474362	131474461	.	+	.	Name=Ear_height;B73v2_pos=10:128949420;1allele=T/G;version=Hapmap2;RS=rs128345913;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	131725583	131725682	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:129167694;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	131791258	131791357	.	+	.	Name=Days_to_silk;B73v2_pos=10:129251309;1allele=/CA;version=Hapmap1;RS=rs838121800;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	131793440	131793539	.	+	.	Name=Ear_height;B73v2_pos=10:129253491;1allele=C/T;version=Hapmap1;RS=rs128625486;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	131815624	131815723	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:129276572;1allele=A/G;version=Hapmap2;RS=rs128625521;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	131920494	131920593	.	+	.	Name=Ear_height;B73v2_pos=10:129346009;1allele=C/A;version=Hapmap2;RS=rs811745590;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	131980113	131980212	.	+	.	Name=Plant_height;B73v2_pos=10:129406950;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	131995977	131996076	.	+	.	Name=Ear_height;B73v2_pos=10:129455469;1allele=T/A;version=Hapmap2;RS=rs804664290;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	132013179	132013278	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:129461227;1allele=G/C;version=Hapmap2;RS=rs278993705;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	132053565	132053664	.	+	.	Name=Ear_height;B73v2_pos=10:129509179;1allele=T/G;version=Hapmap2;RS=rs812025410;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	132065478	132065577	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:129521092;1allele=+/-;version=Hapmap2;RS=rs809256978;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	132068563	132068662	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:129524177;1allele=C/T;version=Hapmap2;RS=rs727005242;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	132129795	132129894	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:129585436;1allele=C/T;version=Hapmap2;RS=rs128625998;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	132183988	132184087	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:129638772;1allele=T/C;version=Hapmap2;RS=rs128626032;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	132184562	132184661	.	+	.	Name=Leaf_length;B73v2_pos=10:129639346;1allele=C/T;version=Hapmap2;RS=rs810763981;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	132219089	132219188	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:129674768;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	132219100	132219199	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:129674779;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	132224501	132224600	.	+	.	Name=Ear_height;B73v2_pos=10:129680181;1allele=A/T;version=Hapmap2;RS=rs848864175;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	132248862	132248961	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:129705460;1allele=C/A;version=Hapmap1;RS=rs132595798;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	132598645	132598744	.	+	.	Name=Plant_height;B73v2_pos=10:130043659;1allele=G/A;version=Hapmap2;RS=rs821336372;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	132636970	132637069	.	+	.	Name=Ear_height;B73v2_pos=10:130081059;1allele=G/A;version=Hapmap2;RS=rs278994362;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	132701496	132701595	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:130149989;1allele=G/A;version=Hapmap2;RS=rs827046915;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	132792159	132792258	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:130233675;1allele=C/T;version=Hapmap2;RS=rs278994504;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	132806434	132806533	.	+	.	Name=Leaf_width;B73v2_pos=10:130246841;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	132826684	132826783	.	+	.	Name=Leaf_width;B73v2_pos=10:130268389;1allele=T/C;version=Hapmap2;RS=rs811208701;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	132843283	132843382	.	+	.	Name=Leaf_width;B73v2_pos=10:130284988;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	132843284	132843383	.	+	.	Name=Leaf_width;B73v2_pos=10:130284989;1allele=GA/;version=Hapmap1;RS=rs132596219;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	132852324	132852423	.	+	.	Name=Ear_row_number;B73v2_pos=10:130293898;1allele=T/C;version=Hapmap2;RS=rs848102119;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	132861488	132861587	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:130303062;1allele=A/G;version=Hapmap2;RS=rs278994744;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	132875858	132875957	.	+	.	Name=Leaf_width;B73v2_pos=10:130413864;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	132884034	132884133	.	+	.	Name=Ear_height;B73v2_pos=10:130379508;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	132956109	132956208	.	+	.	Name=Leaf_width;B73v2_pos=10:130333558;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	133061808	133061907	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:130512733;1allele=T/G;version=Hapmap2;RS=rs824605489;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	133159707	133159806	.	+	.	Name=Ear_row_number;B73v2_pos=10:130615116;1allele=T/C;version=Hapmap2;RS=rs818784142;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	133159715	133159814	.	+	.	Name=Ear_row_number;B73v2_pos=10:130615124;1allele=T/G;version=Hapmap2;RS=rs803306542;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	133160837	133160936	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:130616246;1allele=G/C;version=Hapmap2;RS=rs278995106;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	133223104	133223203	.	+	.	Name=Stalk_strength;B73v2_pos=6:106305335;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	133247177	133247276	.	+	.	Name=Stalk_strength;B73v2_pos=10:130689027;1allele=A/C;version=Hapmap2;RS=rs848923344;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	133375574	133375673	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:130824868;1allele=T/A;version=Hapmap2;RS=rs802878428;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	133465595	133465694	.	+	.	Name=Ear_row_number;B73v2_pos=10:130905440;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	133483787	133483886	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:130923633;1allele=A/G;version=Hapmap2;RS=rs842969013;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	133613892	133613991	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:131052309;1allele=T/C;version=Hapmap2;RS=rs815303368;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	133654123	133654222	.	+	.	Name=Leaf_width;B73v2_pos=10:131092527;1allele=T/C;version=Hapmap2;RS=rs132597320;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	133843496	133843595	.	+	.	Name=Stalk_strength;B73v2_pos=10:131257479;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	133989109	133989208	.	+	.	Name=Cob_diameter;B73v2_pos=10:131512510;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134017077	134017176	.	+	.	Name=Leaf_length;B73v2_pos=10:131421667;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134100021	134100120	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:131524171;1allele=C/T;version=Hapmap2;RS=rs841439019;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	134106367	134106466	.	+	.	Name=Leaf_length;B73v2_pos=10:131530518;1allele=A/T;version=Hapmap2;RS=rs845728970;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	134128298	134128397	.	+	.	Name=Ear_row_number;B73v2_pos=10:131551261;1allele=G/C;version=Hapmap2;RS=rs843733973;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	134305595	134305694	.	+	.	Name=Cob_diameter;B73v2_pos=10:131732685;1allele=T/G;version=Hapmap2;RS=rs1063223535;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	134370220	134370319	.	+	.	Name=Stalk_strength;B73v2_pos=10:131792147;1allele=A/G;version=Hapmap2;RS=rs810753597;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	134432691	134432790	.	+	.	Name=Days_to_silk;B73v2_pos=10:131902292;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134432691	134432790	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:131902292;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134434616	134434715	.	+	.	Name=Leaf_length;B73v2_pos=10:131900367;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134444819	134444918	.	+	.	Name=Sucrose;B73v2_pos=10:131890168;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134452719	134452818	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:131882268;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134525745	134525844	.	+	.	Name=Ear_row_number;B73v2_pos=10:131975327;1allele=G/C;version=Hapmap2;RS=rs1062273357;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	134527091	134527190	.	+	.	Name=Ear_row_number;B73v2_pos=10:131976673;1allele=G/A;version=Hapmap2;RS=rs833421682;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	134527702	134527801	.	+	.	Name=Days_to_silk;B73v2_pos=10:131977288;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134529336	134529435	.	+	.	Name=Ear_row_number;B73v2_pos=10:131978922;1allele=C/A;version=Hapmap2;RS=rs844649691;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	134567459	134567558	.	+	.	Name=Total_amino_acids;B73v2_pos=10:132006329;1allele=C/T;version=Hapmap2;RS=rs278996592;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	134594876	134594975	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:132033747;1allele=G/A;version=Hapmap1;RS=rs842539106;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	134595176	134595275	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:132034047;1allele=/TTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134675560	134675659	.	+	.	Name=Leaf_length;B73v2_pos=10:132098390;1allele=C/A;version=Hapmap2;RS=rs825213369;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	134678167	134678266	.	+	.	Name=Ear_row_number;B73v2_pos=10:132100997;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134737282	134737381	.	+	.	Name=Ear_row_number;B73v2_pos=10:132219947;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134764835	134764934	.	+	.	Name=Plant_height;B73v2_pos=10:132173532;1allele=A/G;version=Hapmap2;RS=rs724617477;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	134799125	134799224	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:132238506;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134801011	134801110	.	+	.	Name=Ear_height;B73v2_pos=10:132236620;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134801012	134801111	.	+	.	Name=Ear_height;B73v2_pos=10:132236619;1allele=A/T;version=Hapmap2;RS=rs819843760;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	134834467	134834566	.	+	.	Name=Ear_row_number;B73v2_pos=10:132202586;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	134907791	134907890	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:132321287;1allele=G/A;version=Hapmap2;RS=rs132598513;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	135044283	135044382	.	+	.	Name=Stalk_strength;B73v2_pos=10:132439989;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135085492	135085591	.	+	.	Name=Stalk_strength;B73v2_pos=10:147328049;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135099545	135099644	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:132525403;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135121334	135121433	.	+	.	Name=Leaf_length;B73v2_pos=10:132547192;1allele=T/A;version=Hapmap2;RS=rs132599218;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	135124808	135124907	.	+	.	Name=Plant_height;B73v2_pos=10:132550666;1allele=G/A;version=Hapmap2;RS=rs824210592;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	135128238	135128337	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:132554096;1allele=C/T;version=Hapmap2;RS=rs128629005;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	135128316	135128415	.	+	.	Name=Ear_row_number;B73v2_pos=10:132554174;1allele=A/G;version=Hapmap2;RS=rs804305187;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	135134935	135135034	.	+	.	Name=Leaf_length;B73v2_pos=10:132560793;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135135600	135135699	.	+	.	Name=Ear_height;B73v2_pos=10:132561458;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135135872	135135971	.	+	.	Name=Glutamate;B73v2_pos=10:132561730;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135148439	135148538	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:132574297;1allele=T/G;version=Hapmap2;RS=rs832611142;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	135191678	135191777	.	+	.	Name=Plant_height;B73v2_pos=10:132617536;1allele=C/T;version=Hapmap2;RS=rs822511764;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	135191678	135191777	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:132617536;1allele=C/T;version=Hapmap2;RS=rs822511764;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	135192797	135192896	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:132618655;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135194291	135194390	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:132620149;1allele=T/C;version=Hapmap1;RS=rs132599469;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	135194291	135194390	.	+	.	Name=Plant_height;B73v2_pos=10:132620149;1allele=T/C;version=Hapmap1;RS=rs132599469;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	135196755	135196854	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:132622613;1allele=G/A;version=Hapmap2;RS=rs832175258;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	135427473	135427572	.	+	.	Name=Leaf_length;B73v2_pos=10:132882071;1allele=CGTAC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135431326	135431425	.	+	.	Name=Leaf_length;B73v2_pos=10:132885924;1allele=T/C;version=Hapmap2;RS=rs823548866;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	135518339	135518438	.	+	.	Name=Leaf_length;B73v2_pos=10:132970555;1allele=G/C;version=Hapmap2;RS=rs801967214;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	135546747	135546846	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:94470035;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	135547848	135547947	.	+	.	Name=Plant_height;B73v2_pos=10:133000067;1allele=T/C;version=Hapmap2;RS=rs806148074;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	135701762	135701861	.	+	.	Name=Ear_height;B73v2_pos=10:133109008;1allele=T/C;version=Hapmap2;RS=rs818441806;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	135811224	135811323	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:133220060;1allele=A/C;version=Hapmap2;RS=rs828554542;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	135962512	135962611	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:133368057;1allele=C/T;version=Hapmap2;RS=rs847204514;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	136001790	136001889	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:133413209;1allele=T/C;version=Hapmap2;RS=rs803348528;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	136083461	136083560	.	+	.	Name=Ear_row_number;B73v2_pos=10:133495440;1allele=T/A;version=Hapmap2;RS=rs278998899;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	136093994	136094093	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:133505976;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	136123531	136123630	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:133548439;1allele=T/G;version=Hapmap2;RS=rs849739065;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	136166364	136166463	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:133585514;1allele=A/G;version=Hapmap2;RS=rs128629800;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	136166437	136166536	.	+	.	Name=Tassel_length;B73v2_pos=10:133585587;1allele=T/C;version=Hapmap2;RS=rs831040622;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	136177034	136177133	.	+	.	Name=Nitrate;B73v2_pos=4:156990238;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	136186800	136186899	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:133641287;1allele=A/T;version=Hapmap2;RS=rs813825907;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	136188986	136189085	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:133643474;1allele=G/A;version=Hapmap1;RS=rs132600913;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	136303012	136303111	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:133702850;1allele=G/A;version=Hapmap2;RS=rs830216358;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	136315616	136315715	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:133715372;1allele=C/T;version=Hapmap2;RS=rs821286717;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	136315971	136316070	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:133715727;1allele=C/A;version=Hapmap2;RS=rs822852423;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	136386521	136386620	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:133788411;1allele=G/T;version=Hapmap2;RS=rs814278882;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	136391766	136391865	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:133793656;1allele=G/A;version=Hapmap2;RS=rs802727420;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	136471642	136471741	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:133873827;1allele=A/G;version=Hapmap2;RS=rs821551473;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	136595707	136595806	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:133995304;1allele=T/A;version=Hapmap2;RS=rs808688229;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	136636081	136636180	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:134037508;1allele=A/T;version=Hapmap2;RS=rs820605789;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	136651184	136651283	.	+	.	Name=Protein;B73v2_pos=10:134052611;1allele=G/A;version=Hapmap2;RS=rs132601615;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	136805344	136805443	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:134219633;1allele=A/G;version=Hapmap2;RS=rs847762486;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	136806076	136806175	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:134189212;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	136834822	136834921	.	+	.	Name=Leaf_length;B73v2_pos=3:215008617;1allele=T/A;version=Hapmap2;RS=rs823637744;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	136875445	136875544	.	+	.	Name=Cob_diameter;B73v2_pos=10:134256694;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	136953555	136953654	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:134433435;1allele=A/T;version=Hapmap2;RS=rs820492120;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	136979047	136979146	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:134458173;1allele=/GCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	137196122	137196221	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:134565057;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	137214419	137214518	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:134583354;1allele=C/G;version=Hapmap2;RS=rs837306268;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	137550932	137551031	.	+	.	Name=Leaf_length;B73v2_pos=10:134923953;1allele=A/G;version=Hapmap2;RS=rs821304590;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	137598021	137598120	.	+	.	Name=Leaf_length;B73v2_pos=10:134973721;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	137618677	137618776	.	+	.	Name=Ear_height;B73v2_pos=10:134994371;1allele=G/A;version=Hapmap2;RS=rs279000969;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	137622039	137622138	.	+	.	Name=Fructose;B73v2_pos=10:134997733;1allele=G/A;version=Hapmap2;RS=rs724719285;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	137677125	137677224	.	+	.	Name=Plant_height;B73v2_pos=10:135055900;1allele=C/T;version=Hapmap2;RS=rs850506680;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	137678853	137678952	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:135057628;1allele=T/A;version=Hapmap2;RS=rs807996737;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	137686010	137686109	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:135064787;1allele=C/T;version=Hapmap2;RS=rs833266995;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	137686286	137686385	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:135065063;1allele=A/C;version=Hapmap2;RS=rs801786438;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	137766290	137766389	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:135161364;1allele=G/A;version=Hapmap2;RS=rs827806529;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	137783254	137783353	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:135178328;1allele=C/T;version=Hapmap2;RS=rs811867752;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	137951251	137951350	.	+	.	Name=Ear_height;B73v2_pos=10:135332776;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138062131	138062230	.	+	.	Name=Ear_height;B73v2_pos=10:135446751;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138250573	138250672	.	+	.	Name=Ear_row_number;B73v2_pos=10:135615044;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138320925	138321024	.	+	.	Name=Ear_row_number;B73v2_pos=10:135685396;1allele=C/T;version=Hapmap1;RS=rs132604425;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	138324845	138324944	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:135689316;1allele=G/A;version=Hapmap2;RS=rs817529683;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	138327590	138327689	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:135692061;1allele=/GCAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138433668	138433767	.	+	.	Name=Leaf_width;B73v2_pos=10:135799118;1allele=G/A;version=Hapmap2;RS=rs132604678;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138546069	138546168	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:135901898;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138635980	138636079	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:136000111;1allele=C/T;version=Hapmap2;RS=rs814056809;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	138670894	138670993	.	+	.	Name=Leaf_length;B73v2_pos=10:136040699;1allele=A/G;version=Hapmap2;RS=rs807491021;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138671418	138671517	.	+	.	Name=Leaf_length;B73v2_pos=10:136041223;1allele=A/C;version=Hapmap2;RS=rs279002269;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	138703912	138704011	.	+	.	Name=Ear_height;B73v2_pos=10:136073718;1allele=T/C;version=Hapmap1;RS=rs132605132;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138726694	138726793	.	+	.	Name=Plant_height;B73v2_pos=10:136085716;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138726694	138726793	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:136085716;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138737713	138737812	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:136105406;1allele=T/C;version=Hapmap1;RS=rs726771371;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138739467	138739566	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=10:136107160;1allele=C/A;version=Hapmap1;RS=rs132605398;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	138740243	138740342	.	+	.	Name=Leaf_width;B73v2_pos=10:136107936;1allele=G/C;version=Hapmap1;RS=rs132605426;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	138740244	138740343	.	+	.	Name=Ear_row_number;B73v2_pos=10:136107937;1allele=T/G;version=Hapmap2;RS=rs847491579;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	138778804	138778903	.	+	.	Name=Stalk_strength;B73v2_pos=10:136131537;1allele=A/C;version=Hapmap2;RS=rs801869816;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	138822687	138822786	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:136183494;1allele=A/G;version=Hapmap2;RS=rs812152254;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138823845	138823944	.	+	.	Name=Leaf_width;B73v2_pos=10:136184652;1allele=C/T;version=Hapmap2;RS=rs279002564;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138827329	138827428	.	+	.	Name=Leaf_width;B73v2_pos=10:136188136;1allele=A/G;version=Hapmap2;RS=rs808593617;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	138827335	138827434	.	+	.	Name=Leaf_width;B73v2_pos=10:136188142;1allele=T/C;version=Hapmap2;RS=rs820587274;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	138884007	138884106	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:136244904;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138884461	138884560	.	+	.	Name=Leaf_width;B73v2_pos=10:136245358;1allele=C/T;version=Hapmap2;RS=rs1062694851;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138884748	138884847	.	+	.	Name=Plant_height;B73v2_pos=10:136245645;1allele=A/C;version=Hapmap1;RS=rs844869208;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	138884796	138884895	.	+	.	Name=Leaf_width;B73v2_pos=10:136245693;1allele=G/C;version=Hapmap1;RS=rs132605605;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	138886732	138886831	.	+	.	Name=Leaf_width;B73v2_pos=10:136247629;1allele=A/G;version=Hapmap2;RS=rs279002589;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	138886968	138887067	.	+	.	Name=Leaf_width;B73v2_pos=10:136247865;1allele=C/T;version=Hapmap2;RS=rs279002593;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138887222	138887321	.	+	.	Name=Ear_row_number;B73v2_pos=10:136248119;1allele=C/T;version=Hapmap2;RS=rs839047604;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138887589	138887688	.	+	.	Name=Ear_row_number;B73v2_pos=10:136248486;1allele=A/G;version=Hapmap2;RS=rs279002606;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	138889141	138889240	.	+	.	Name=Leaf_width;B73v2_pos=10:136250032;1allele=G/A;version=Hapmap2;RS=rs1062381665;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138889156	138889255	.	+	.	Name=Ear_height;B73v2_pos=10:136250047;1allele=G/A;version=Hapmap2;RS=rs823194955;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	138890290	138890389	.	+	.	Name=Leaf_width;B73v2_pos=10:136251181;1allele=C/T;version=Hapmap2;RS=rs1061155444;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138894624	138894723	.	+	.	Name=Leaf_width;B73v2_pos=10:136255516;1allele=G/A;version=Hapmap2;RS=rs1060586448;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138894912	138895011	.	+	.	Name=Leaf_width;B73v2_pos=10:136255804;1allele=C/T;version=Hapmap2;RS=rs813230582;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	138894912	138895011	.	+	.	Name=Ear_row_number;B73v2_pos=10:136255804;1allele=C/T;version=Hapmap2;RS=rs813230582;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	138895975	138896074	.	+	.	Name=Ear_row_number;B73v2_pos=10:136256867;1allele=C/A;version=Hapmap2;RS=rs279002667;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	138896002	138896101	.	+	.	Name=Leaf_width;B73v2_pos=10:136256894;1allele=A/G;version=Hapmap2;RS=rs279002668;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	138897078	138897177	.	+	.	Name=Leaf_width;B73v2_pos=10:136257970;1allele=G/A;version=Hapmap2;RS=rs1062249820;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138897798	138897897	.	+	.	Name=Leaf_width;B73v2_pos=10:136258690;1allele=A/G;version=Hapmap2;RS=rs279002691;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	138898898	138898997	.	+	.	Name=Ear_row_number;B73v2_pos=10:136259790;1allele=A/T;version=Hapmap2;RS=rs279002707;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	138913390	138913489	.	+	.	Name=Ear_row_number;B73v2_pos=10:136270540;1allele=A/G;version=Hapmap2;RS=rs831205744;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138926299	138926398	.	+	.	Name=Leaf_width;B73v2_pos=10:136281943;1allele=T/C;version=Hapmap1;RS=rs132605774;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138926771	138926870	.	+	.	Name=Cob_diameter;B73v2_pos=10:136282415;1allele=T/A;version=Hapmap2;RS=rs810789017;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	138927340	138927439	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:136282984;1allele=C/A;version=Hapmap2;RS=rs132605749;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	138927342	138927441	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:136282986;1allele=A/G;version=Hapmap2;RS=rs132605748;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	138927458	138927557	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:136283102;1allele=T/C;version=Hapmap2;RS=rs132605744;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138942113	138942212	.	+	.	Name=Leaf_width;B73v2_pos=10:136297754;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	138943635	138943734	.	+	.	Name=Ear_height;B73v2_pos=10:136299276;1allele=G/A;version=Hapmap2;RS=rs827135842;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	138957785	138957884	.	+	.	Name=Plant_height;B73v2_pos=10:136313426;1allele=G/T;version=Hapmap2;RS=rs279002858;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	138957785	138957884	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:136313426;1allele=G/T;version=Hapmap2;RS=rs279002858;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	138959784	138959883	.	+	.	Name=Leaf_width;B73v2_pos=10:136315425;1allele=C/T;version=Hapmap2;RS=rs802263546;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	138960963	138961062	.	+	.	Name=Ear_height;B73v2_pos=10:136316604;1allele=G/A;version=Hapmap1;RS=rs132605667;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	139005863	139005962	.	+	.	Name=Plant_height;B73v2_pos=10:136361209;1allele=A/G;version=Hapmap2;RS=rs824127167;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	139005863	139005962	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:136361209;1allele=A/G;version=Hapmap2;RS=rs824127167;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	139067107	139067206	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:136422458;1allele=C/T;version=Hapmap2;RS=rs821104529;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	139083274	139083373	.	+	.	Name=Leaf_width;B73v2_pos=10:136438433;1allele=C/G;version=Hapmap2;RS=rs128348108;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	139083885	139083984	.	+	.	Name=Leaf_width;B73v2_pos=10:136439044;1allele=C/T;version=Hapmap2;RS=rs128631316;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	139084321	139084420	.	+	.	Name=Ear_row_number;B73v2_pos=10:136439480;1allele=G/A;version=Hapmap2;RS=rs726685866;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139085127	139085226	.	+	.	Name=Leaf_width;B73v2_pos=10:136440286;1allele=G/T;version=Hapmap2;RS=rs279002935;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	139085207	139085306	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:136440366;1allele=A/G;version=Hapmap2;RS=rs834220071;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	139099637	139099736	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:136454798;1allele=G/A;version=Hapmap2;RS=rs279002953;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139117392	139117491	.	+	.	Name=Cob_diameter;B73v2_pos=10:136474238;1allele=C/G;version=Hapmap2;RS=rs818441087;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	139120173	139120272	.	+	.	Name=Plant_height;B73v2_pos=10:136477019;1allele=T/C;version=Hapmap2;RS=rs845911999;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	139120173	139120272	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:136477019;1allele=T/C;version=Hapmap2;RS=rs845911999;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	139120173	139120272	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:136477019;1allele=T/C;version=Hapmap2;RS=rs845911999;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	139124198	139124297	.	+	.	Name=Ear_height;B73v2_pos=10:136481036;1allele=A/C;version=Hapmap2;RS=rs813750006;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	139163544	139163643	.	+	.	Name=Leaf_width;B73v2_pos=10:136520393;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139267769	139267868	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:136616833;1allele=A/G;version=Hapmap2;RS=rs132606087;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	139282478	139282577	.	+	.	Name=Leaf_length;B73v2_pos=10:136651016;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139352382	139352481	.	+	.	Name=Ear_height;B73v2_pos=10:136707506;1allele=G/T;version=Hapmap2;RS=rs819106195;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	139389547	139389646	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:136743250;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139410470	139410569	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:136765306;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139441177	139441276	.	+	.	Name=Ear_height;B73v2_pos=10:136803233;1allele=C/A;version=Hapmap2;RS=rs841291894;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	139441430	139441529	.	+	.	Name=Plant_height;B73v2_pos=10:136803486;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139447057	139447156	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:136808377;1allele=G/A;version=Hapmap2;RS=rs804815577;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139447057	139447156	.	+	.	Name=Plant_height;B73v2_pos=10:136808377;1allele=G/A;version=Hapmap2;RS=rs804815577;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139447330	139447429	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:136808650;1allele=T/G;version=Hapmap2;RS=rs841116047;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139478572	139478671	.	+	.	Name=Plant_height;B73v2_pos=10:136832176;1allele=C/T;version=Hapmap2;RS=rs824903004;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	139478900	139478999	.	+	.	Name=Ear_height;B73v2_pos=10:136832504;1allele=AT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139480816	139480915	.	+	.	Name=Plant_height;B73v2_pos=10:136834420;1allele=C/T;version=Hapmap2;RS=rs128631492;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	139484667	139484766	.	+	.	Name=Ear_height;B73v2_pos=10:136838271;1allele=G/A;version=Hapmap2;RS=rs132606538;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	139486025	139486124	.	+	.	Name=Ear_row_number;B73v2_pos=10:136839629;1allele=G/C;version=Hapmap2;RS=rs128631523;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	139486064	139486163	.	+	.	Name=Ear_row_number;B73v2_pos=10:136839668;1allele=T/C;version=Hapmap2;RS=rs132606556;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	139573604	139573703	.	+	.	Name=Starch;B73v2_pos=10:136945700;1allele=A/C;version=Hapmap2;RS=rs828594821;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	139744370	139744469	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:137102787;1allele=T/A;version=Hapmap2;RS=rs841486136;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	139783533	139783632	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:137202227;1allele=G/A;version=Hapmap2;RS=rs825318433;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139834582	139834681	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:137165243;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139836040	139836139	.	+	.	Name=Ear_row_number;B73v2_pos=10:137163784;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139836243	139836342	.	+	.	Name=Ear_row_number;B73v2_pos=10:137163581;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	139906963	139907062	.	+	.	Name=Stalk_strength;B73v2_pos=10:137252382;1allele=G/A;version=Hapmap2;RS=rs806164514;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139925515	139925614	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:137270104;1allele=G/A;version=Hapmap2;RS=rs835215362;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139939796	139939895	.	+	.	Name=Ear_height;B73v2_pos=10:137283572;1allele=ATCG/;version=Hapmap1;RS=rs810097629;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	139970964	139971063	.	+	.	Name=Stalk_strength;B73v2_pos=10:137314165;1allele=C/G;version=Hapmap2;RS=rs827303681;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	139973511	139973610	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:137316712;1allele=A/G;version=Hapmap2;RS=rs829305977;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	139974868	139974967	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:137318068;1allele=C/T;version=Hapmap2;RS=rs128631761;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	139986547	139986646	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:137329319;1allele=G/A;version=Hapmap2;RS=rs834522283;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	139986712	139986811	.	+	.	Name=Leaf_width;B73v2_pos=10:137329484;1allele=T/C;version=Hapmap2;RS=rs128348194;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	140009016	140009115	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:137357353;1allele=/CTACC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	140078963	140079062	.	+	.	Name=Ear_height;B73v2_pos=10:137425557;1allele=A/G;version=Hapmap2;RS=rs811272161;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140081452	140081551	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:137428046;1allele=A/G;version=Hapmap2;RS=rs843231840;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140081452	140081551	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:137428046;1allele=A/G;version=Hapmap2;RS=rs843231840;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140112570	140112669	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=10:137456294;1allele=C/T;version=Hapmap2;RS=rs804343939;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	140116997	140117096	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:137460722;1allele=G/A;version=Hapmap2;RS=rs833276956;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140118923	140119022	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:137462648;1allele=T/A;version=Hapmap2;RS=rs812574188;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	140128423	140128522	.	+	.	Name=Ear_height;B73v2_pos=10:137472149;1allele=C/T;version=Hapmap1;RS=rs132607599;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	140128963	140129062	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:137472688;1allele=T/A;version=Hapmap2;RS=rs831873746;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	140136390	140136489	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:137480116;1allele=C/T;version=Hapmap2;RS=rs813582389;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	140143620	140143719	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:137487346;1allele=/TT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	140144747	140144846	.	+	.	Name=Ear_height;B73v2_pos=10:137488473;1allele=A/T;version=Hapmap2;RS=rs132607734;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	140145494	140145593	.	+	.	Name=Ear_height;B73v2_pos=10:137489220;1allele=G/A;version=Hapmap1;RS=rs132607766;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140154435	140154534	.	+	.	Name=Ear_height;B73v2_pos=10:137498162;1allele=A/C;version=Hapmap2;RS=rs821279380;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	140157316	140157415	.	+	.	Name=Plant_height;B73v2_pos=10:137501043;1allele=C/G;version=Hapmap2;RS=rs128631834;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	140162093	140162192	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:137505820;1allele=A/C;version=Hapmap2;RS=rs128348345;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	140162093	140162192	.	+	.	Name=Ear_height;B73v2_pos=10:137505820;1allele=A/C;version=Hapmap2;RS=rs128348345;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	140195061	140195160	.	+	.	Name=Stalk_strength;B73v2_pos=10:137538083;1allele=T/C;version=Hapmap2;RS=rs279004111;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	140197220	140197319	.	+	.	Name=Ear_height;B73v2_pos=10:137540242;1allele=T/A;version=Hapmap2;RS=rs826242496;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	140208587	140208686	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:137551589;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	140225716	140225815	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:137568492;1allele=G/C;version=Hapmap1;RS=rs132607926;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	140225716	140225815	.	+	.	Name=Plant_height;B73v2_pos=10:137568492;1allele=G/C;version=Hapmap1;RS=rs132607926;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	140226246	140226345	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:137569022;1allele=G/A;version=Hapmap2;RS=rs802304228;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140246282	140246381	.	+	.	Name=Plant_height;B73v2_pos=10:137589128;1allele=A/G;version=Hapmap1;RS=rs132607969;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	140317231	140317330	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:137658935;1allele=A/T;version=Hapmap2;RS=rs835277028;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	140322366	140322465	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:137664070;1allele=T/C;version=Hapmap2;RS=rs279004323;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	140322366	140322465	.	+	.	Name=Plant_height;B73v2_pos=10:137664070;1allele=T/C;version=Hapmap2;RS=rs279004323;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	140330346	140330445	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:137672050;1allele=G/T;version=Hapmap2;RS=rs844358280;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	140332167	140332266	.	+	.	Name=Ear_height;B73v2_pos=10:137673871;1allele=C/G;version=Hapmap1;RS=rs132608117;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	140332170	140332269	.	+	.	Name=Ear_height;B73v2_pos=10:137673874;1allele=T/C;version=Hapmap2;RS=rs132608118;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	140406651	140406750	.	+	.	Name=Stalk_strength;B73v2_pos=10:137748358;1allele=C/A;version=Hapmap2;RS=rs826062834;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	140447309	140447408	.	+	.	Name=Stalk_strength;B73v2_pos=10:137766353;1allele=G/A;version=Hapmap2;RS=rs834432407;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140472565	140472664	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:137812968;1allele=G/A;version=Hapmap2;RS=rs833251767;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140489040	140489139	.	+	.	Name=Cob_diameter;B73v2_pos=10:137829444;1allele=G/C;version=Hapmap1;RS=rs132608322;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	140492290	140492389	.	+	.	Name=Stalk_strength;B73v2_pos=10:137832694;1allele=A/G;version=Hapmap2;RS=rs810781038;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140492739	140492838	.	+	.	Name=Ear_row_number;B73v2_pos=10:137833143;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	140492852	140492951	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:137833256;1allele=G/C;version=Hapmap2;RS=rs811575766;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	140542734	140542833	.	+	.	Name=Cob_diameter;B73v2_pos=10:137883143;1allele=-/+;version=Hapmap2;RS=rs819291888;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	140721247	140721346	.	+	.	Name=Ear_height;B73v2_pos=10:138021400;1allele=A/T;version=Hapmap2;RS=rs847544312;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	140721996	140722095	.	+	.	Name=Plant_height;B73v2_pos=10:138022149;1allele=T/C;version=Hapmap2;RS=rs128632446;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	140726527	140726626	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:138026681;1allele=G/A;version=Hapmap2;RS=rs726706255;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140730470	140730569	.	+	.	Name=Tassel_length;B73v2_pos=10:138030624;1allele=G/A;version=Hapmap2;RS=rs831325483;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140730483	140730582	.	+	.	Name=Tassel_length;B73v2_pos=10:138030637;1allele=G/A;version=Hapmap2;RS=rs817888279;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140740704	140740803	.	+	.	Name=Cob_diameter;B73v2_pos=10:138040860;1allele=A/G;version=Hapmap2;RS=rs836122391;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140740882	140740981	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:138041038;1allele=C/T;version=Hapmap2;RS=rs815489702;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	140745070	140745169	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:138045226;1allele=A/G;version=Hapmap1;RS=rs132608745;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140745070	140745169	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138045226;1allele=A/G;version=Hapmap1;RS=rs132608745;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140749593	140749692	.	+	.	Name=Cob_diameter;B73v2_pos=10:138049749;1allele=G/C;version=Hapmap2;RS=rs835269988;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	140769232	140769331	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:138069521;1allele=G/C;version=Hapmap2;RS=rs803888972;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	140788368	140788467	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:138083320;1allele=G/A;version=Hapmap2;RS=rs814445573;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140793071	140793170	.	+	.	Name=Leaf_length;B73v2_pos=10:138088023;1allele=A/G;version=Hapmap2;RS=rs132608968;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140824721	140824820	.	+	.	Name=Plant_height;B73v2_pos=10:138119668;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	140905224	140905323	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138193080;1allele=G/A;version=Hapmap2;RS=rs815144128;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	140906098	140906197	.	+	.	Name=Fructose;B73v2_pos=10:138193954;1allele=T/C;version=Hapmap2;RS=rs812735256;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	140924781	140924880	.	+	.	Name=Cob_diameter;B73v2_pos=10:138210618;1allele=T/C;version=Hapmap1;RS=rs132609217;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	140927132	140927231	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:138212969;1allele=A/G;version=Hapmap2;RS=rs826268979;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	141013393	141013492	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138299659;1allele=C/A;version=Hapmap2;RS=rs128632756;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	141013596	141013695	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138299862;1allele=A/C;version=Hapmap2;RS=rs819030568;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	141019797	141019896	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:138306064;1allele=G/C;version=Hapmap2;RS=rs814865330;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	141056174	141056273	.	+	.	Name=Cob_diameter;B73v2_pos=10:138345618;1allele=A/G;version=Hapmap2;RS=rs128632805;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141152137	141152236	.	+	.	Name=Leaf_width;B73v2_pos=10:138426805;1allele=G/A;version=Hapmap2;RS=rs132609310;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	141186621	141186720	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:138461288;1allele=A/G;version=Hapmap2;RS=rs817479441;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	141334235	141334334	.	+	.	Name=Tassel_length;B73v2_pos=10:138608669;1allele=C/G;version=Hapmap2;RS=rs279005912;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	141334332	141334431	.	+	.	Name=Ear_height;B73v2_pos=10:138608766;1allele=C/T;version=Hapmap1;RS=rs132609512;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	141335344	141335443	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:138609778;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141387852	141387951	.	+	.	Name=Leaf_width;B73v2_pos=10:138661966;1allele=/GT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141388898	141388997	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138663012;1allele=G/T;version=Hapmap2;RS=rs128348964;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	141400828	141400927	.	+	.	Name=Ear_height;B73v2_pos=10:138674948;1allele=T/A;version=Hapmap2;RS=rs128632996;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	141464009	141464108	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:138728801;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141465764	141465863	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:138730556;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141466712	141466811	.	+	.	Name=Stalk_strength;B73v2_pos=10:138731504;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141466712	141466811	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:138731504;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141467949	141468048	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:138732741;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141469630	141469729	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138734422;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141491328	141491427	.	+	.	Name=Cob_diameter;B73v2_pos=10:138774343;1allele=C/T;version=Hapmap2;RS=rs279005996;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	141514013	141514112	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:138797926;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141514026	141514125	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138797939;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141514026	141514125	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:138797939;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141514162	141514261	.	+	.	Name=Cob_diameter;B73v2_pos=10:138798075;1allele=T/C;version=Hapmap2;RS=rs279006024;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	141602373	141602472	.	+	.	Name=Cob_diameter;B73v2_pos=10:138858605;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141614698	141614797	.	+	.	Name=100_Kernel_weight;B73v2_pos=10:138870935;1allele=A/C;version=Hapmap2;RS=rs813734655;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	141624998	141625097	.	+	.	Name=Ear_height;B73v2_pos=10:138881235;1allele=G/A;version=Hapmap2;RS=rs824256360;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141625808	141625907	.	+	.	Name=Cob_diameter;B73v2_pos=10:138882045;1allele=C/A;version=Hapmap2;RS=rs726750496;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	141631961	141632060	.	+	.	Name=Cob_diameter;B73v2_pos=10:138888198;1allele=A/G;version=Hapmap2;RS=rs826408313;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141636849	141636948	.	+	.	Name=Cob_diameter;B73v2_pos=10:138893086;1allele=C/T;version=Hapmap2;RS=rs838157703;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	141650248	141650347	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:138906485;1allele=G/A;version=Hapmap2;RS=rs831293009;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141655544	141655643	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:138911781;1allele=T/A;version=Hapmap2;RS=rs806515748;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	141679614	141679713	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:138935854;1allele=T/C;version=Hapmap2;RS=rs128633311;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	141682217	141682316	.	+	.	Name=Tassel_length;B73v2_pos=10:138938457;1allele=C/T;version=Hapmap2;RS=rs822468690;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	141682649	141682748	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:138938889;1allele=C/G;version=Hapmap1;RS=rs132610123;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	141702857	141702956	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138993351;1allele=C/T;version=Hapmap2;RS=rs814970692;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	141702969	141703068	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:138993463;1allele=G/C;version=Hapmap2;RS=rs834698900;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	141705564	141705663	.	+	.	Name=Leaf_length;B73v2_pos=10:138996058;1allele=A/T;version=Hapmap2;RS=rs834695443;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	141720738	141720837	.	+	.	Name=Cob_diameter;B73v2_pos=10:139011236;1allele=T/G;version=Hapmap2;RS=rs822005850;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	141720989	141721088	.	+	.	Name=Cob_diameter;B73v2_pos=10:139011487;1allele=A/G;version=Hapmap2;RS=rs132610177;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141763233	141763332	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:139043084;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141763300	141763399	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139043151;1allele=T/A;version=Hapmap2;RS=rs279006572;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	141763738	141763837	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139043589;1allele=A/G;version=Hapmap2;RS=rs818112515;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	141764987	141765086	.	+	.	Name=Leaf_width;B73v2_pos=10:139044837;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141765888	141765987	.	+	.	Name=Ear_height;B73v2_pos=10:139045738;1allele=T/A;version=Hapmap2;RS=rs831185270;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	141766043	141766142	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:139045893;1allele=A/G;version=Hapmap2;RS=rs279006584;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	141786636	141786735	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139075214;1allele=G/A;version=Hapmap1;RS=rs128349110;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141791573	141791672	.	+	.	Name=Tassel_length;B73v2_pos=10:139080151;1allele=G/T;version=Hapmap2;RS=rs279006610;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	141794214	141794313	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139082790;1allele=/TAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	141796586	141796685	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:139085162;1allele=A/G;version=Hapmap2;RS=rs128633467;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141833486	141833585	.	+	.	Name=Cob_diameter;B73v2_pos=10:139122054;1allele=G/A;version=Hapmap2;RS=rs128633582;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	141835803	141835902	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139124371;1allele=G/C;version=Hapmap2;RS=rs132610483;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	141836084	141836183	.	+	.	Name=Tassel_length;B73v2_pos=10:139124652;1allele=C/A;version=Hapmap2;RS=rs279006734;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	142001957	142002056	.	+	.	Name=Ear_row_number;B73v2_pos=10:139841237;1allele=A/T;version=Hapmap2;RS=rs821385931;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	142011307	142011406	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139850955;1allele=A/T;version=Hapmap1;RS=rs132611456;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	142014315	142014414	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:139853963;1allele=G/C;version=Hapmap2;RS=rs814564569;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	142019152	142019251	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:139858795;1allele=G/C;version=Hapmap2;RS=rs832108860;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	142019152	142019251	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:139858795;1allele=G/C;version=Hapmap2;RS=rs832108860;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	142070733	142070832	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:139883049;1allele=T/C;version=Hapmap2;RS=rs824947923;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	142070948	142071047	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:139882834;1allele=G/A;version=Hapmap2;RS=rs815832138;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	142074102	142074201	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:139879680;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	142119518	142119617	.	+	.	Name=Cob_diameter;B73v2_pos=10:139961578;1allele=T/C;version=Hapmap2;RS=rs128634088;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	142131827	142131926	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:139973887;1allele=G/A;version=Hapmap2;RS=rs726838610;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	142133937	142134036	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:139975997;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	142136841	142136940	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:139978901;1allele=G/A;version=Hapmap2;RS=rs128349329;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	142157868	142157967	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:139999886;1allele=A/G;version=Hapmap2;RS=rs128349433;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	142214264	142214363	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:140048769;1allele=G/T;version=Hapmap2;RS=rs128634216;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	142214264	142214363	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:140048769;1allele=G/T;version=Hapmap2;RS=rs128634216;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	142218749	142218848	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:140053254;1allele=G/A;version=Hapmap2;RS=rs832555256;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	142247545	142247644	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:140082059;1allele=A/T;version=Hapmap2;RS=rs835189394;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	142275857	142275956	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:140129907;1allele=G/C;version=Hapmap2;RS=rs820467876;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	142290847	142290946	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:140144900;1allele=G/A;version=Hapmap2;RS=rs849035862;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	142327272	142327371	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:140191254;1allele=G/A;version=Hapmap2;RS=rs818352249;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	142345582	142345681	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:140165891;1allele=A/T;version=Hapmap2;RS=rs128634340;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	142346422	142346521	.	+	.	Name=Plant_height;B73v2_pos=10:140166731;1allele=T/C;version=Hapmap2;RS=rs128634343;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	142346875	142346974	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:140167184;1allele=C/A;version=Hapmap1;RS=rs806129187;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	142347264	142347363	.	+	.	Name=Ear_row_number;B73v2_pos=10:140167573;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	142347272	142347371	.	+	.	Name=Ear_row_number;B73v2_pos=10:140167581;1allele=T/A;version=Hapmap1;RS=rs132611996;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	142347378	142347477	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:140167687;1allele=A/G;version=Hapmap2;RS=rs279007789;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	142347631	142347730	.	+	.	Name=Ear_row_number;B73v2_pos=10:140167940;1allele=C/T;version=Hapmap2;RS=rs829711744;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	142699033	142699132	.	+	.	Name=Nitrate;B73v2_pos=4:21842796;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	142714201	142714300	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:140548532;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	142781778	142781877	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:140615934;1allele=G/A;version=Hapmap2;RS=rs810550499;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	142821287	142821386	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:140654317;1allele=C/T;version=Hapmap2;RS=rs843406341;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	142823628	142823727	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:140656657;1allele=C/T;version=Hapmap1;RS=rs132612480;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	142832350	142832449	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:140665381;1allele=T/C;version=Hapmap1;RS=rs132612515;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	142892932	142893031	.	+	.	Name=Ear_row_number;B73v2_pos=10:140727207;1allele=A/C;version=Hapmap2;RS=rs724342853;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	142899470	142899569	.	+	.	Name=Plant_height;B73v2_pos=10:140733745;1allele=T/C;version=Hapmap2;RS=rs840347454;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	142901537	142901636	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:140735812;1allele=A/T;version=Hapmap2;RS=rs817592635;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	142906343	142906442	.	+	.	Name=Cob_diameter;B73v2_pos=10:140740733;1allele=C/G;version=Hapmap2;RS=rs279008047;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	142907526	142907625	.	+	.	Name=Ear_height;B73v2_pos=10:140741916;1allele=/CT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	142908504	142908603	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:140742894;1allele=C/A;version=Hapmap2;RS=rs128634764;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	142909903	142910002	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:140744293;1allele=C/A;version=Hapmap2;RS=rs806243596;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	142912002	142912101	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:140746392;1allele=T/C;version=Hapmap1;RS=rs813160545;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	142968893	142968992	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:140801064;1allele=T/C;version=Hapmap2;RS=rs814454342;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143020190	143020289	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:140853468;1allele=/TTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143020247	143020346	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:140853525;1allele=G/A;version=Hapmap1;RS=rs128349728;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143020247	143020346	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:140853525;1allele=G/A;version=Hapmap1;RS=rs128349728;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143029551	143029650	.	+	.	Name=Cob_diameter;B73v2_pos=10:140862831;1allele=C/T;version=Hapmap2;RS=rs819055622;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143125681	143125780	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:141003526;1allele=C/T;version=Hapmap2;RS=rs128349837;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143126935	143127034	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:141004780;1allele=C/G;version=Hapmap1;RS=rs128635349;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	143161224	143161323	.	+	.	Name=Ear_height;B73v2_pos=10:140959045;1allele=G/A;version=Hapmap2;RS=rs808685653;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143169718	143169817	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:140967539;1allele=A/T;version=Hapmap2;RS=rs829364654;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	143170542	143170641	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:140968363;1allele=T/C;version=Hapmap2;RS=rs132613190;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143170542	143170641	.	+	.	Name=Plant_height;B73v2_pos=10:140968363;1allele=G/A;version=Hapmap1;RS=rs132613190;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143170878	143170977	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:140968699;1allele=/CGT;version=Hapmap1;RS=rs132613184;2ref_allele=A;3alt_allele=AC
chr10	Wallace_2014	SNP	143170971	143171070	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:140968792;1allele=/TC;version=Hapmap1;RS=rs132613180;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	143172876	143172975	.	+	.	Name=Ear_row_number;B73v2_pos=10:140970697;1allele=C/A;version=Hapmap2;RS=rs128349753;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	143188154	143188253	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:140985975;1allele=A/T;version=Hapmap2;RS=rs128635098;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143197391	143197490	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:140995212;1allele=G/T;version=Hapmap1;RS=rs132612880;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143236413	143236512	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:141061397;1allele=C/T;version=Hapmap2;RS=rs825795866;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143246635	143246734	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:141071619;1allele=C/T;version=Hapmap2;RS=rs831442715;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143305905	143306004	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171851697;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143306679	143306778	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:141125887;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143309016	143309115	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141128224;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143309625	143309724	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141128833;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143339216	143339315	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141158518;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143437274	143437373	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141193039;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143447818	143447917	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141237480;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143454858	143454957	.	+	.	Name=Ear_row_number;B73v2_pos=10:141230506;1allele=T/A;version=Hapmap1;RS=rs826924460;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143473877	143473976	.	+	.	Name=Cob_diameter;B73v2_pos=10:141252542;1allele=G/C;version=Hapmap1;RS=rs132613811;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	143501959	143502058	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:141263943;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143509435	143509534	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141271419;1allele=G/C;version=Hapmap2;RS=rs807420978;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	143589370	143589469	.	+	.	Name=Leaf_length;B73v2_pos=10:141350077;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143595219	143595318	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141355926;1allele=G/T;version=Hapmap2;RS=rs128350236;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	143595336	143595435	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=10:141356043;1allele=T/A;version=Hapmap2;RS=rs817018344;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	143604716	143604815	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141366432;1allele=G/A;version=Hapmap2;RS=rs820754703;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143604730	143604829	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141366446;1allele=G/A;version=Hapmap2;RS=rs827431266;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143604730	143604829	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141366446;1allele=G/A;version=Hapmap2;RS=rs827431266;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143605898	143605997	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141367614;1allele=A/C;version=Hapmap2;RS=rs822460055;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	143606597	143606696	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141368313;1allele=G/T;version=Hapmap1;RS=rs132614192;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	143606710	143606809	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141368426;1allele=G/T;version=Hapmap2;RS=rs132614196;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	143606710	143606809	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141368426;1allele=G/T;version=Hapmap2;RS=rs132614196;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	143606761	143606860	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141368477;1allele=C/T;version=Hapmap2;RS=rs132614197;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143606761	143606860	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141368477;1allele=C/T;version=Hapmap2;RS=rs132614197;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143619567	143619666	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:141381286;1allele=A/G;version=Hapmap2;RS=rs842411047;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	143658618	143658717	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141420186;1allele=T/C;version=Hapmap2;RS=rs840196440;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143681049	143681148	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:141442618;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143706805	143706904	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:141465508;1allele=G/T;version=Hapmap2;RS=rs833072212;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	143715029	143715128	.	+	.	Name=Ear_row_number;B73v2_pos=10:141473129;1allele=T/G;version=Hapmap2;RS=rs132614273;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	143715635	143715734	.	+	.	Name=Ear_row_number;B73v2_pos=10:141473735;1allele=A/T;version=Hapmap1;RS=rs132614293;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	143746324	143746423	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141504601;1allele=G/A;version=Hapmap2;RS=rs830522409;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143785300	143785399	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:141543584;1allele=T/C;version=Hapmap2;RS=rs128350329;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143796061	143796160	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141553110;1allele=T/C;version=Hapmap2;RS=rs826387874;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143800962	143801061	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:141558011;1allele=C/G;version=Hapmap2;RS=rs829014804;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	143803342	143803441	.	+	.	Name=Ear_row_number;B73v2_pos=10:141560391;1allele=A/G;version=Hapmap1;RS=rs128636339;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143811988	143812087	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:141569034;1allele=T/C;version=Hapmap2;RS=rs128636277;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143813923	143814022	.	+	.	Name=Plant_height;B73v2_pos=10:141570969;1allele=A/G;version=Hapmap2;RS=rs279009437;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	143816155	143816254	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:141573201;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143829188	143829287	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:141586234;1allele=G/C;version=Hapmap2;RS=rs822483948;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	143829302	143829401	.	+	.	Name=Plant_height;B73v2_pos=10:141586348;1allele=C/T;version=Hapmap2;RS=rs1062563080;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143830132	143830231	.	+	.	Name=Stalk_strength;B73v2_pos=10:141587178;1allele=C/T;version=Hapmap2;RS=rs823385586;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	143832438	143832537	.	+	.	Name=Ear_row_number;B73v2_pos=10:141589484;1allele=T/C;version=Hapmap2;RS=rs132614700;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143833092	143833191	.	+	.	Name=Ear_row_number;B73v2_pos=10:141590138;1allele=C/G;version=Hapmap2;RS=rs724506065;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	143843840	143843939	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:141600886;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143854046	143854145	.	+	.	Name=Tassel_length;B73v2_pos=10:141611091;1allele=A/C;version=Hapmap2;RS=rs805751887;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	143885137	143885236	.	+	.	Name=Ear_row_number;B73v2_pos=10:141642204;1allele=C/T;version=Hapmap2;RS=rs838179477;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	143892477	143892576	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:141649544;1allele=G/C;version=Hapmap2;RS=rs279009674;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	143905011	143905110	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141662148;1allele=G/C;version=Hapmap2;RS=rs726862012;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	143918369	143918424	.	+	.	Name=Total_amino_acids;B73v2_pos=10:141677229;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	143928564	143928663	.	+	.	Name=Ear_row_number;B73v2_pos=10:141687469;1allele=A/C;version=Hapmap1;RS=rs132614877;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	143993853	143993952	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:141759449;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144008270	144008369	.	+	.	Name=Plant_height;B73v2_pos=10:141772666;1allele=A/G;version=Hapmap2;RS=rs816805355;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144021230	144021329	.	+	.	Name=Stalk_strength;B73v2_pos=10:141785630;1allele=G/A;version=Hapmap2;RS=rs826718490;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144063250	144063349	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:141820156;1allele=G/A;version=Hapmap2;RS=rs128350522;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144065235	144065334	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:141822953;1allele=A/G;version=Hapmap2;RS=rs807363009;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144065236	144065335	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:141822954;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144065272	144065371	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:141822990;1allele=C/G;version=Hapmap2;RS=rs839952909;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	144065272	144065371	.	+	.	Name=Ear_row_number;B73v2_pos=10:141822990;1allele=C/G;version=Hapmap2;RS=rs839952909;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	144067872	144067971	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:141825590;1allele=A/G;version=Hapmap2;RS=rs808858820;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144072199	144072298	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:141829917;1allele=A/G;version=Hapmap2;RS=rs279009866;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144074213	144074312	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:141831931;1allele=A/C;version=Hapmap2;RS=rs807603001;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	144075449	144075548	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:141833167;1allele=C/T;version=Hapmap2;RS=rs806150415;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144217682	144217781	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:141965058;1allele=C/G;version=Hapmap2;RS=rs819171324;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	144223869	144223968	.	+	.	Name=Stalk_strength;B73v2_pos=10:141971245;1allele=G/A;version=Hapmap1;RS=rs132615304;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144224047	144224146	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:141971423;1allele=A/G;version=Hapmap2;RS=rs128636726;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144227392	144227491	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:141974768;1allele=G/A;version=Hapmap2;RS=rs279010183;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144287659	144287758	.	+	.	Name=Stalk_strength;B73v2_pos=10:142034706;1allele=C/G;version=Hapmap2;RS=rs279010218;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	144321992	144322091	.	+	.	Name=Ear_row_number;B73v2_pos=10:142070414;1allele=C/G;version=Hapmap2;RS=rs128636800;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144325772	144325871	.	+	.	Name=Stalk_strength;B73v2_pos=10:142074194;1allele=A/G;version=Hapmap2;RS=rs820855718;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144326138	144326237	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142074560;1allele=T/C;version=Hapmap1;RS=rs128636845;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	144327885	144327984	.	+	.	Name=Plant_height;B73v2_pos=10:142076303;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144346271	144346370	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142094649;1allele=G/A;version=Hapmap2;RS=rs840933168;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144349082	144349181	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:142097460;1allele=A/G;version=Hapmap2;RS=rs132615511;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	144374050	144374149	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:142124824;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144414173	144414272	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142163364;1allele=A/G;version=Hapmap2;RS=rs279010444;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144414208	144414307	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142163399;1allele=T/C;version=Hapmap2;RS=rs279010445;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	144414379	144414478	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142163570;1allele=A/G;version=Hapmap2;RS=rs132615555;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144414386	144414485	.	+	.	Name=Height_above_ear;B73v2_pos=10:142163577;1allele=A/G;version=Hapmap1;RS=rs132615556;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144415295	144415394	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:142164486;1allele=C/T;version=Hapmap2;RS=rs279010452;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144415317	144415416	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:142164508;1allele=C/T;version=Hapmap2;RS=rs829105196;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144419696	144419795	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:142168887;1allele=C/T;version=Hapmap2;RS=rs835566736;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144430661	144430760	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:142179857;1allele=A/G;version=Hapmap2;RS=rs1061057764;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144440765	144440864	.	+	.	Name=Starch;B73v2_pos=10:142189961;1allele=C/T;version=Hapmap2;RS=rs279010616;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	144446400	144446499	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142195596;1allele=A/G;version=Hapmap2;RS=rs840659149;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144446400	144446499	.	+	.	Name=Plant_height;B73v2_pos=10:142195596;1allele=A/G;version=Hapmap2;RS=rs840659149;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144446884	144446983	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142196080;1allele=A/G;version=Hapmap2;RS=rs846064730;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144509006	144509105	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:142240802;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144532548	144532647	.	+	.	Name=Cob_diameter;B73v2_pos=10:142279094;1allele=T/A;version=Hapmap2;RS=rs826768553;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	144536142	144536241	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:142282688;1allele=T/C;version=Hapmap2;RS=rs826650199;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	144545111	144545210	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:142291657;1allele=A/T;version=Hapmap1;RS=rs128637050;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	144593441	144593540	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:142336871;1allele=T/C;version=Hapmap2;RS=rs128351013;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	144596073	144596172	.	+	.	Name=Total_amino_acids;B73v2_pos=10:142339503;1allele=G/A;version=Hapmap2;RS=rs821125340;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144620541	144620640	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:142365050;1allele=G/A;version=Hapmap2;RS=rs132615911;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	144622672	144622771	.	+	.	Name=Total_amino_acids;B73v2_pos=10:142367181;1allele=A/G;version=Hapmap2;RS=rs128637268;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144654422	144654521	.	+	.	Name=Tassel_length;B73v2_pos=10:142398932;1allele=T/A;version=Hapmap2;RS=rs128637327;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	144656211	144656310	.	+	.	Name=Starch;B73v2_pos=10:142400722;1allele=T/A;version=Hapmap2;RS=rs132616059;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	144659709	144659808	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:142404220;1allele=A/G;version=Hapmap2;RS=rs128637345;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144698187	144698286	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:142442717;1allele=G/A;version=Hapmap1;RS=rs132616143;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	144761180	144761279	.	+	.	Name=Total_amino_acids;B73v2_pos=10:142506965;1allele=C/T;version=Hapmap2;RS=rs128351196;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144763683	144763782	.	+	.	Name=Starch;B73v2_pos=10:142509468;1allele=C/T;version=Hapmap2;RS=rs132616256;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144764491	144764590	.	+	.	Name=Ear_row_number;B73v2_pos=10:142510276;1allele=C/G;version=Hapmap2;RS=rs128351214;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144765840	144765939	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:142511625;1allele=/AGGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144820337	144820436	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:142592178;1allele=G/A;version=Hapmap2;RS=rs842026049;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	144821301	144821400	.	+	.	Name=Ear_row_number;B73v2_pos=10:142593142;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144821341	144821440	.	+	.	Name=Ear_row_number;B73v2_pos=10:142593182;1allele=C/T;version=Hapmap1;RS=rs842258526;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	144824841	144824940	.	+	.	Name=Total_amino_acids;B73v2_pos=10:142596681;1allele=G/T;version=Hapmap2;RS=rs838859379;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	144843402	144843501	.	+	.	Name=Stalk_strength;B73v2_pos=10:142615243;1allele=G/A;version=Hapmap2;RS=rs726661400;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	144843461	144843560	.	+	.	Name=Plant_height;B73v2_pos=10:142615302;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144845982	144846081	.	+	.	Name=Days_to_silk;B73v2_pos=10:142617823;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144947041	144947140	.	+	.	Name=Plant_height;B73v2_pos=10:142713077;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	144947062	144947161	.	+	.	Name=Plant_height;B73v2_pos=10:142713098;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145026948	145027047	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:142793574;1allele=A/G;version=Hapmap2;RS=rs279011704;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	145027921	145028020	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:142794547;1allele=A/T;version=Hapmap2;RS=rs808161818;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	145029203	145029302	.	+	.	Name=Starch;B73v2_pos=10:142795829;1allele=T/C;version=Hapmap2;RS=rs132616819;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	145029203	145029302	.	+	.	Name=Total_amino_acids;B73v2_pos=10:142795829;1allele=C/T;version=Hapmap1;RS=rs132616819;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	145031736	145031835	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:142798362;1allele=A/G;version=Hapmap2;RS=rs132616886;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	145032342	145032441	.	+	.	Name=Starch;B73v2_pos=10:142798968;1allele=T/G;version=Hapmap1;RS=rs839251491;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	145046711	145046810	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:142813337;1allele=G/T;version=Hapmap2;RS=rs820565485;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	145052526	145052625	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:142819156;1allele=G/A;version=Hapmap2;RS=rs841217876;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	145085786	145085885	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:142852087;1allele=G/A;version=Hapmap2;RS=rs804751254;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	145091768	145091867	.	+	.	Name=Days_to_silk;B73v2_pos=10:143079907;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145102613	145102712	.	+	.	Name=Stalk_strength;B73v2_pos=10:143069062;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145102739	145102838	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:143068936;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145212499	145212598	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:142959246;1allele=/AGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145213512	145213611	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:142958233;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145242285	145242384	.	+	.	Name=Total_amino_acids;B73v2_pos=10:142929460;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145242464	145242563	.	+	.	Name=Total_amino_acids;B73v2_pos=10:142929281;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145349340	145349439	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:143176954;1allele=C/T;version=Hapmap2;RS=rs813999717;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	145353409	145353508	.	+	.	Name=Chlorophyll_B;B73v2_pos=10:143181023;1allele=A/G;version=Hapmap2;RS=rs805270894;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	145423827	145423926	.	+	.	Name=Days_to_silk;B73v2_pos=10:143254825;1allele=G/A;version=Hapmap2;RS=rs836219623;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	145434725	145434824	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:143265723;1allele=A/G;version=Hapmap2;RS=rs827144582;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	145439032	145439131	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:143270028;1allele=C/T;version=Hapmap2;RS=rs279012353;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	145439041	145439140	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:143270037;1allele=A/C;version=Hapmap2;RS=rs279012354;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	145551610	145551709	.	+	.	Name=Ear_height;B73v2_pos=10:143383189;1allele=G/A;version=Hapmap2;RS=rs818909393;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	145553776	145553875	.	+	.	Name=Total_amino_acids;B73v2_pos=10:143385355;1allele=T/C;version=Hapmap1;RS=rs128638651;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	145559095	145559194	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:143390674;1allele=C/A;version=Hapmap1;RS=rs132617781;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	145571541	145571640	.	+	.	Name=Ear_height;B73v2_pos=10:143405689;1allele=A/G;version=Hapmap2;RS=rs842834206;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	145572229	145572328	.	+	.	Name=Plant_height;B73v2_pos=10:143406377;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145577132	145577231	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:143411280;1allele=A/T;version=Hapmap2;RS=rs817383006;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	145589718	145589817	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:143423866;1allele=C/T;version=Hapmap2;RS=rs843421688;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	145671299	145671398	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:143505451;1allele=A/G;version=Hapmap2;RS=rs838190497;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	145671886	145671985	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:143506038;1allele=T/G;version=Hapmap2;RS=rs128638844;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	145673686	145673785	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:143507838;1allele=T/G;version=Hapmap2;RS=rs279012876;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	145797988	145798087	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:143633381;1allele=C/T;version=Hapmap2;RS=rs845405533;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	145873284	145873383	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:143710908;1allele=C/T;version=Hapmap2;RS=rs817636381;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	145873506	145873605	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:143711130;1allele=T/A;version=Hapmap2;RS=rs279013419;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	145881525	145881624	.	+	.	Name=Starch;B73v2_pos=10:143719149;1allele=A/G;version=Hapmap2;RS=rs843168360;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	145906558	145906657	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211069061;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145946130	145946229	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:143784640;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	145982863	145982962	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:143852640;1allele=A/G;version=Hapmap2;RS=rs832148106;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	146093480	146093579	.	+	.	Name=Total_amino_acids;B73v2_pos=10:143933430;1allele=A/T;version=Hapmap2;RS=rs834491197;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	146094680	146094779	.	+	.	Name=Total_amino_acids;B73v2_pos=10:143934630;1allele=G/C;version=Hapmap1;RS=rs132618629;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	146095160	146095259	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:143935110;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	146174008	146174107	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144061507;1allele=T/G;version=Hapmap2;RS=rs279013770;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	146174070	146174169	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144061569;1allele=C/T;version=Hapmap2;RS=rs279013772;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146184752	146184850	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144033101;1allele=C/T;version=Hapmap1;RS=rs279013734;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146230746	146230845	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144106741;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	146232667	146232766	.	+	.	Name=Glutamate;B73v2_pos=10:144108662;1allele=G/A;version=Hapmap1;RS=rs132618786;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146237898	146237997	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144113893;1allele=C/T;version=Hapmap2;RS=rs132618711;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	146266398	146266497	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144130847;1allele=C/G;version=Hapmap2;RS=rs128639560;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	146268286	146268385	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144132735;1allele=T/G;version=Hapmap2;RS=rs823167858;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	146269668	146269767	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144134117;1allele=G/A;version=Hapmap2;RS=rs834828326;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	146273407	146273506	.	+	.	Name=Glutamate;B73v2_pos=10:144137644;1allele=A/C;version=Hapmap1;RS=rs132618856;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	146277784	146277883	.	+	.	Name=Glutamate;B73v2_pos=10:144142021;1allele=C/T;version=Hapmap1;RS=rs132618885;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146281192	146281291	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144145429;1allele=A/C;version=Hapmap1;RS=rs132618940;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	146306894	146306993	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:144189015;1allele=G/A;version=Hapmap2;RS=rs807850864;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	146360176	146360275	.	+	.	Name=Malate;B73v2_pos=10:144242209;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	146405928	146406027	.	+	.	Name=Glutamate;B73v2_pos=10:144410104;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	146598727	146598826	.	+	.	Name=Plant_height;B73v2_pos=10:144453313;1allele=C/T;version=Hapmap2;RS=rs128352197;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	146606339	146606438	.	+	.	Name=Tassel_length;B73v2_pos=10:144460925;1allele=A/C;version=Hapmap2;RS=rs829759119;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	146666702	146666801	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:144522689;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	146667130	146667229	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144523117;1allele=T/A;version=Hapmap2;RS=rs802424697;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	146667903	146668002	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144523890;1allele=A/G;version=Hapmap2;RS=rs832153746;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	146668518	146668617	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144524505;1allele=C/A;version=Hapmap2;RS=rs724804760;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	146668533	146668632	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144524520;1allele=A/G;version=Hapmap2;RS=rs128640046;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	146669452	146669551	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:144525439;1allele=G/C;version=Hapmap2;RS=rs128640059;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	146672845	146672944	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144528832;1allele=C/G;version=Hapmap2;RS=rs279014490;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	146673116	146673215	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144529103;1allele=A/G;version=Hapmap2;RS=rs834379571;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	146673116	146673215	.	+	.	Name=Glutamate;B73v2_pos=10:144529103;1allele=A/G;version=Hapmap2;RS=rs834379571;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	146773475	146773574	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144617911;1allele=T/A;version=Hapmap2;RS=rs279014601;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	146774862	146774961	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144619298;1allele=C/A;version=Hapmap2;RS=rs128640264;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	146779097	146779196	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144623533;1allele=A/T;version=Hapmap2;RS=rs279014619;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	146785640	146785739	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144630076;1allele=C/T;version=Hapmap2;RS=rs835648416;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146797258	146797357	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144641694;1allele=A/G;version=Hapmap2;RS=rs279014703;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	146797744	146797843	.	+	.	Name=Ear_height;B73v2_pos=10:144642180;1allele=C/T;version=Hapmap2;RS=rs838026133;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146811317	146811416	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144645100;1allele=G/T;version=Hapmap2;RS=rs128352300;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	146822672	146822771	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:144660502;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	146845862	146845961	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144677423;1allele=C/T;version=Hapmap2;RS=rs1063352566;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	146846535	146846634	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144678096;1allele=A/G;version=Hapmap2;RS=rs279014748;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	146851041	146851140	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144682602;1allele=A/G;version=Hapmap1;RS=rs279014770;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	146853430	146853529	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144684991;1allele=C/T;version=Hapmap2;RS=rs725500842;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	146854437	146854536	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144685998;1allele=G/A;version=Hapmap1;RS=rs726696689;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	146855913	146856012	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144687474;1allele=A/G;version=Hapmap1;RS=rs132619841;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	146856830	146856929	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144688391;1allele=A/T;version=Hapmap2;RS=rs279014789;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	146857026	146857125	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144688587;1allele=C/A;version=Hapmap1;RS=rs132619887;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	146857038	146857137	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144688599;1allele=C/A;version=Hapmap1;RS=rs132619890;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146860355	146860454	.	+	.	Name=Glucose;B73v2_pos=10:144691916;1allele=T/C;version=Hapmap2;RS=rs128640365;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	146860740	146860839	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:144692301;1allele=G/C;version=Hapmap2;RS=rs132619941;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	146913488	146913587	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:144736099;1allele=G/T;version=Hapmap2;RS=rs832350366;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	146920031	146920130	.	+	.	Name=Ear_height;B73v2_pos=10:144742642;1allele=C/T;version=Hapmap2;RS=rs830350166;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	146923487	146923586	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144746097;1allele=G/T;version=Hapmap2;RS=rs279015029;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	146935954	146936053	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144775179;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147002231	147002330	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144836022;1allele=C/A;version=Hapmap2;RS=rs816849350;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	147007157	147007256	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:144840949;1allele=C/T;version=Hapmap2;RS=rs809712589;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	147012198	147012297	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:144845369;1allele=T/A;version=Hapmap2;RS=rs848653072;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	147012198	147012297	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:144845369;1allele=T/A;version=Hapmap2;RS=rs848653072;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	147018938	147019037	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144852109;1allele=T/G;version=Hapmap2;RS=rs279015338;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	147020034	147020133	.	+	.	Name=Malate;B73v2_pos=10:144853204;1allele=T/A;version=Hapmap2;RS=rs279015349;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	147098395	147098494	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144922114;1allele=T/A;version=Hapmap2;RS=rs825511874;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	147098628	147098727	.	+	.	Name=Glutamate;B73v2_pos=10:144922347;1allele=A/G;version=Hapmap2;RS=rs815070392;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147104124	147104223	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144932403;1allele=C/G;version=Hapmap2;RS=rs823753005;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	147104427	147104526	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144932706;1allele=A/C;version=Hapmap2;RS=rs128640675;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	147104688	147104787	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144932967;1allele=C/T;version=Hapmap2;RS=rs279015428;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	147104882	147104981	.	+	.	Name=Glutamate;B73v2_pos=10:144933161;1allele=G/C;version=Hapmap2;RS=rs279015429;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	147105055	147105154	.	+	.	Name=Glutamate;B73v2_pos=10:144933334;1allele=T/C;version=Hapmap2;RS=rs132620442;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147106151	147106250	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144934430;1allele=T/C;version=Hapmap1;RS=rs132620482;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147106259	147106358	.	+	.	Name=Glutamate;B73v2_pos=10:144934538;1allele=C/A;version=Hapmap1;RS=rs845758932;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	147106353	147106452	.	+	.	Name=Malate;B73v2_pos=10:144934632;1allele=TT/;version=Hapmap1;RS=rs838699985;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	147110443	147110542	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:144938722;1allele=C/T;version=Hapmap2;RS=rs814983675;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	147164583	147164682	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:144991793;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147172408	147172507	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144984141;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147176644	147176743	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:144979907;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147176811	147176910	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:144979740;1allele=C/T;version=Hapmap1;RS=rs726897548;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	147183725	147183824	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145014749;1allele=/CCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147186714	147186813	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:145017738;1allele=A/G;version=Hapmap2;RS=rs804476075;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147187104	147187203	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:145018128;1allele=A/T;version=Hapmap2;RS=rs847055502;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	147187495	147187594	.	+	.	Name=Glutamate;B73v2_pos=10:145018519;1allele=C/T;version=Hapmap2;RS=rs279015610;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147188655	147188754	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145019679;1allele=G/T;version=Hapmap1;RS=rs128640835;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	147189165	147189264	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145020189;1allele=T/C;version=Hapmap2;RS=rs850264571;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147193361	147193460	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145024386;1allele=T/C;version=Hapmap2;RS=rs802437123;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147213380	147213479	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:144957318;1allele=/GCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147216706	147216805	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:144960644;1allele=C/A;version=Hapmap2;RS=rs810352278;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	147248850	147248949	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:145094497;1allele=C/T;version=Hapmap2;RS=rs128640804;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	147255013	147255112	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:145098450;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147261218	147261317	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145104656;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147328909	147329008	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145173947;1allele=C/T;version=Hapmap2;RS=rs826040893;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	147329014	147329113	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145174052;1allele=C/A;version=Hapmap2;RS=rs817988468;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	147331895	147331994	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:145176935;1allele=G/A;version=Hapmap2;RS=rs816415397;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	147333127	147333226	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145178167;1allele=T/C;version=Hapmap2;RS=rs807685276;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147333466	147333565	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145178506;1allele=T/G;version=Hapmap1;RS=rs132620989;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	147333466	147333565	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:145178506;1allele=T/G;version=Hapmap1;RS=rs132620989;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	147334363	147334462	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:145179403;1allele=T/A;version=Hapmap2;RS=rs843660854;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	147345657	147345756	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145190698;1allele=T/C;version=Hapmap2;RS=rs828632790;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147345657	147345756	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:145190698;1allele=T/C;version=Hapmap2;RS=rs828632790;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147353364	147353463	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145198407;1allele=G/C;version=Hapmap2;RS=rs806856915;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	147387736	147387835	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:145232973;1allele=G/T;version=Hapmap2;RS=rs132621409;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	147418582	147418681	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145263833;1allele=A/G;version=Hapmap2;RS=rs132621510;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147426686	147426785	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145273173;1allele=G/T;version=Hapmap2;RS=rs128641140;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	147428392	147428491	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145274879;1allele=G/A;version=Hapmap1;RS=rs128641160;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	147430805	147430904	.	+	.	Name=Starch;B73v2_pos=10:145277292;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147437808	147437907	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145279004;1allele=A/-;version=Hapmap1;RS=rs835818456;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147440103	147440202	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145281299;1allele=C/T;version=Hapmap2;RS=rs802330036;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147443540	147443639	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145284737;1allele=T/C;version=Hapmap2;RS=rs834888564;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147444205	147444304	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145285402;1allele=A/G;version=Hapmap1;RS=rs132621694;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	147520071	147520170	.	+	.	Name=Starch;B73v2_pos=10:145355079;1allele=G/A;version=Hapmap2;RS=rs128352729;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147573804	147573903	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145375517;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147584007	147584106	.	+	.	Name=Starch;B73v2_pos=10:145395939;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147584017	147584116	.	+	.	Name=Starch;B73v2_pos=10:145395949;1allele=G/A;version=Hapmap2;RS=rs279016107;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147584199	147584298	.	+	.	Name=Starch;B73v2_pos=10:145396131;1allele=G/A;version=Hapmap2;RS=rs726461357;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147584221	147584320	.	+	.	Name=Starch;B73v2_pos=10:145396153;1allele=C/T;version=Hapmap2;RS=rs726290914;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147598100	147598199	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145402332;1allele=G/A;version=Hapmap2;RS=rs825898839;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	147599572	147599671	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:145403804;1allele=A/C;version=Hapmap2;RS=rs128641241;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	147599966	147600065	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:145404198;1allele=C/G;version=Hapmap2;RS=rs128641243;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	147600943	147601042	.	+	.	Name=Ear_height;B73v2_pos=10:145405175;1allele=A/T;version=Hapmap1;RS=rs132621908;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147601060	147601159	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145405292;1allele=T/C;version=Hapmap2;RS=rs837420287;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147608526	147608625	.	+	.	Name=Starch;B73v2_pos=10:145412759;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147669502	147669600	.	+	.	Name=Sucrose;B73v2_pos=10:145453083;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147680872	147680971	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145464457;1allele=C/T;version=Hapmap2;RS=rs279016165;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	147761557	147761656	.	+	.	Name=Starch;B73v2_pos=10:145559047;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	147762966	147763065	.	+	.	Name=Starch;B73v2_pos=10:145560456;1allele=G/A;version=Hapmap2;RS=rs1061929676;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147763268	147763367	.	+	.	Name=Starch;B73v2_pos=10:145560758;1allele=G/A;version=Hapmap2;RS=rs1061138589;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147769139	147769238	.	+	.	Name=Starch;B73v2_pos=10:145566629;1allele=T/A;version=Hapmap2;RS=rs279016259;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	147770652	147770751	.	+	.	Name=Starch;B73v2_pos=10:145568142;1allele=G/A;version=Hapmap2;RS=rs847102136;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	147773103	147773202	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:145570593;1allele=G/A;version=Hapmap2;RS=rs726547892;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	147773511	147773610	.	+	.	Name=Starch;B73v2_pos=10:145571001;1allele=C/G;version=Hapmap2;RS=rs1064047934;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	147773660	147773759	.	+	.	Name=Starch;B73v2_pos=10:145571150;1allele=A/G;version=Hapmap2;RS=rs279016263;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	147864263	147864362	.	+	.	Name=Stalk_strength;B73v2_pos=10:145632352;1allele=G/A;version=Hapmap2;RS=rs840840877;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	147879389	147879488	.	+	.	Name=Starch;B73v2_pos=10:145647482;1allele=T/C;version=Hapmap2;RS=rs128352900;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	147935197	147935296	.	+	.	Name=Stalk_strength;B73v2_pos=10:145695383;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148011840	148011939	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:145787722;1allele=C/T;version=Hapmap2;RS=rs828275074;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148022580	148022679	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145798462;1allele=T/A;version=Hapmap2;RS=rs814429221;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	148022580	148022679	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:145798462;1allele=T/A;version=Hapmap2;RS=rs814429221;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	148023798	148023897	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145799680;1allele=G/A;version=Hapmap2;RS=rs835265100;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148030055	148030154	.	+	.	Name=Ear_row_number;B73v2_pos=10:145805938;1allele=C/G;version=Hapmap2;RS=rs820724386;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	148057386	148057485	.	+	.	Name=Days_to_silk;B73v2_pos=10:145844240;1allele=G/A;version=Hapmap2;RS=rs828131839;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148102095	148102194	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:145874532;1allele=A/G;version=Hapmap2;RS=rs830009568;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148116780	148116879	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:145889227;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148119411	148119510	.	+	.	Name=Sucrose;B73v2_pos=10:145891859;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148121024	148121123	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145893472;1allele=C/T;version=Hapmap2;RS=rs813009536;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148131369	148131468	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145903815;1allele=A/T;version=Hapmap1;RS=rs132622402;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148131369	148131468	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:145903815;1allele=A/T;version=Hapmap1;RS=rs132622402;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148150660	148150759	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145923111;1allele=G/A;version=Hapmap2;RS=rs128641871;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148151615	148151714	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:145924066;1allele=T/C;version=Hapmap2;RS=rs834715475;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148151816	148151915	.	+	.	Name=Starch;B73v2_pos=10:145924267;1allele=G/A;version=Hapmap2;RS=rs279017067;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148165831	148165930	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145938287;1allele=G/T;version=Hapmap2;RS=rs809618035;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	148168320	148168419	.	+	.	Name=Starch;B73v2_pos=10:145940776;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148169686	148169785	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:145942142;1allele=C/T;version=Hapmap1;RS=rs132622440;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148175065	148175164	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145947521;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148175280	148175379	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145947736;1allele=T/G;version=Hapmap1;RS=rs132622459;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	148175283	148175382	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:145947739;1allele=A/C;version=Hapmap1;RS=rs132622460;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148176403	148176502	.	+	.	Name=Ear_height;B73v2_pos=10:145948859;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148176906	148177005	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:145949362;1allele=G/A;version=Hapmap1;RS=rs132622538;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	148178733	148178832	.	+	.	Name=Starch;B73v2_pos=10:145951189;1allele=A/C;version=Hapmap2;RS=rs128353055;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	148250622	148250721	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:146054197;1allele=A/T;version=Hapmap2;RS=rs803020213;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148341017	148341116	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:146109857;1allele=C/G;version=Hapmap2;RS=rs822490605;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	148348221	148348320	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146117061;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148348221	148348320	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146117061;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148395639	148395738	.	+	.	Name=Starch;B73v2_pos=10:146165690;1allele=T/G;version=Hapmap2;RS=rs279017358;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	148397352	148397451	.	+	.	Name=Starch;B73v2_pos=10:146167403;1allele=T/A;version=Hapmap2;RS=rs1064008386;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148403626	148403725	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146173677;1allele=C/A;version=Hapmap2;RS=rs842533362;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	148403626	148403725	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146173677;1allele=C/A;version=Hapmap2;RS=rs842533362;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	148404241	148404340	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:146174292;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148404394	148404493	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:146174445;1allele=A/G;version=Hapmap2;RS=rs824967787;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148404592	148404691	.	+	.	Name=Ear_height;B73v2_pos=10:146174643;1allele=A/G;version=Hapmap2;RS=rs846686574;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148407726	148407825	.	+	.	Name=Ear_height;B73v2_pos=10:146177777;1allele=T/G;version=Hapmap1;RS=rs132622982;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	148407726	148407825	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146177777;1allele=T/G;version=Hapmap1;RS=rs132622982;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	148408524	148408623	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146178572;1allele=T/C;version=Hapmap2;RS=rs812487009;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148413598	148413697	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:146183646;1allele=C/G;version=Hapmap1;RS=rs128642170;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148416814	148416913	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146186862;1allele=A/C;version=Hapmap1;RS=rs128353138;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	148419185	148419284	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=10:146189233;1allele=T/C;version=Hapmap2;RS=rs833513129;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148459200	148459299	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146228630;1allele=C/T;version=Hapmap2;RS=rs279017505;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148503276	148503375	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146236997;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148503439	148503538	.	+	.	Name=Nitrate;B73v2_pos=10:146236834;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148503557	148503656	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146236716;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148503866	148503965	.	+	.	Name=Starch;B73v2_pos=10:146236407;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148507401	148507500	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146295344;1allele=/TAA;version=Hapmap1;RS=rs869547723;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	148507760	148507859	.	+	.	Name=Starch;B73v2_pos=10:146294985;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148510465	148510564	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146292280;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148512639	148512738	.	+	.	Name=Starch;B73v2_pos=10:146290106;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148513877	148513976	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146288868;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148545632	148545731	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146312247;1allele=A/G;version=Hapmap2;RS=rs831676868;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148546861	148546960	.	+	.	Name=Days_to_silk;B73v2_pos=10:146313476;1allele=C/T;version=Hapmap2;RS=rs819091862;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148547609	148547708	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=10:146314224;1allele=A/G;version=Hapmap2;RS=rs813524973;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148548346	148548445	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146314961;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148549128	148549227	.	+	.	Name=Days_to_silk;B73v2_pos=10:146315743;1allele=G/A;version=Hapmap2;RS=rs811605760;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148549128	148549227	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:146315743;1allele=G/A;version=Hapmap2;RS=rs811605760;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148549265	148549364	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146315880;1allele=C/T;version=Hapmap2;RS=rs846783949;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148549599	148549698	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146316214;1allele=C/T;version=Hapmap2;RS=rs807063324;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148549703	148549802	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146316318;1allele=T/C;version=Hapmap2;RS=rs801737616;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148549703	148549802	.	+	.	Name=Ear_height;B73v2_pos=10:146316318;1allele=T/C;version=Hapmap2;RS=rs801737616;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148549703	148549802	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146316318;1allele=T/C;version=Hapmap2;RS=rs801737616;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148557081	148557180	.	+	.	Name=Ear_height;B73v2_pos=10:146323696;1allele=A/G;version=Hapmap2;RS=rs850057239;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148558124	148558223	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:146324739;1allele=G/T;version=Hapmap2;RS=rs805417389;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	148558127	148558226	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:146324742;1allele=A/T;version=Hapmap2;RS=rs279017601;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148561964	148562063	.	+	.	Name=Starch;B73v2_pos=10:146328579;1allele=A/G;version=Hapmap1;RS=rs132623313;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148562466	148562565	.	+	.	Name=Starch;B73v2_pos=10:146329081;1allele=T/C;version=Hapmap2;RS=rs128642226;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148568070	148568169	.	+	.	Name=Days_to_silk;B73v2_pos=10:146334685;1allele=G/T;version=Hapmap2;RS=rs827535229;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	148569626	148569725	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146336241;1allele=C/T;version=Hapmap1;RS=rs824342897;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148569704	148569803	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146336319;1allele=G/T;version=Hapmap2;RS=rs809090556;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	148572038	148572137	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:146338653;1allele=G/A;version=Hapmap2;RS=rs132623359;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148572689	148572788	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146339304;1allele=C/T;version=Hapmap2;RS=rs841009927;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148572689	148572788	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146339304;1allele=C/T;version=Hapmap2;RS=rs841009927;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148578830	148578929	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146345445;1allele=C/G;version=Hapmap2;RS=rs822498719;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	148578830	148578929	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146345445;1allele=C/G;version=Hapmap2;RS=rs822498719;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	148613084	148613183	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146397627;1allele=T/C;version=Hapmap2;RS=rs128353234;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148613899	148613998	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146398442;1allele=C/T;version=Hapmap1;RS=rs128353240;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148628935	148629034	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:208966372;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148683767	148683866	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146454098;1allele=G/T;version=Hapmap2;RS=rs838985669;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	148694570	148694669	.	+	.	Name=Malate;B73v2_pos=10:146464901;1allele=C/G;version=Hapmap2;RS=rs128642286;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	148694570	148694669	.	+	.	Name=Glutamate;B73v2_pos=10:146464901;1allele=C/G;version=Hapmap2;RS=rs128642286;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	148699276	148699375	.	+	.	Name=Malate;B73v2_pos=10:146469607;1allele=G/A;version=Hapmap2;RS=rs817407057;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148728526	148728625	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:146498964;1allele=T/G;version=Hapmap2;RS=rs803808845;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	148728549	148728648	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:146498987;1allele=T/C;version=Hapmap2;RS=rs279017812;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148762611	148762710	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146524216;1allele=G/A;version=Hapmap2;RS=rs839160509;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148764354	148764453	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146525959;1allele=C/T;version=Hapmap2;RS=rs820628437;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148812508	148812607	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146571790;1allele=C/A;version=Hapmap2;RS=rs803840322;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	148812508	148812607	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146571790;1allele=C/A;version=Hapmap2;RS=rs803840322;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	148812536	148812635	.	+	.	Name=Ear_height;B73v2_pos=10:146571818;1allele=G/C;version=Hapmap2;RS=rs833039590;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	148818094	148818193	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146577376;1allele=C/G;version=Hapmap2;RS=rs279018015;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	148822835	148822934	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146582117;1allele=T/-;version=Hapmap1;RS=rs132623854;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	148826163	148826262	.	+	.	Name=Ear_height;B73v2_pos=10:146585445;1allele=T/G;version=Hapmap2;RS=rs128642476;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	148884736	148884835	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147178013;1allele=A/G;version=Hapmap2;RS=rs847017705;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148890584	148890683	.	+	.	Name=Malate;B73v2_pos=10:146647549;1allele=A/C;version=Hapmap1;RS=rs132623996;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148890584	148890683	.	+	.	Name=Glutamate;B73v2_pos=10:146647549;1allele=A/C;version=Hapmap1;RS=rs132623996;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148892749	148892848	.	+	.	Name=Glutamate;B73v2_pos=10:146649714;1allele=C/T;version=Hapmap2;RS=rs132624004;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148892755	148892854	.	+	.	Name=Glutamate;B73v2_pos=10:146649720;1allele=A/G;version=Hapmap2;RS=rs132624005;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148893318	148893417	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146650283;1allele=C/A;version=Hapmap2;RS=rs724406139;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	148893324	148893423	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146650289;1allele=G/A;version=Hapmap2;RS=rs128642582;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148894697	148894796	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146651662;1allele=T/A;version=Hapmap2;RS=rs813869508;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	148895931	148896030	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:146652896;1allele=A/G;version=Hapmap2;RS=rs279018272;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148895942	148896041	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146652907;1allele=T/C;version=Hapmap2;RS=rs828852391;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148896290	148896370	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146653131;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148896451	148896550	.	+	.	Name=Malate;B73v2_pos=10:146653311;1allele=A/T;version=Hapmap2;RS=rs128642603;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148896587	148896686	.	+	.	Name=Glutamate;B73v2_pos=10:146653447;1allele=C/T;version=Hapmap2;RS=rs128642606;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148896626	148896725	.	+	.	Name=Malate;B73v2_pos=10:146653486;1allele=C/T;version=Hapmap2;RS=rs132624023;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148896634	148896733	.	+	.	Name=Malate;B73v2_pos=10:146653494;1allele=A/G;version=Hapmap2;RS=rs816413553;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148909199	148909298	.	+	.	Name=Malate;B73v2_pos=10:146666066;1allele=A/G;version=Hapmap2;RS=rs128642621;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148910212	148910311	.	+	.	Name=Ear_height;B73v2_pos=10:146667079;1allele=G/T;version=Hapmap2;RS=rs820642145;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	148911353	148911452	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146668220;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148911560	148911659	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146668427;1allele=T/G;version=Hapmap2;RS=rs805251870;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	148915045	148915144	.	+	.	Name=Malate;B73v2_pos=10:146671912;1allele=A/T;version=Hapmap2;RS=rs128642641;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148919549	148919648	.	+	.	Name=Glutamate;B73v2_pos=10:146676416;1allele=A/G;version=Hapmap2;RS=rs279018311;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148921553	148921652	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146678420;1allele=G/A;version=Hapmap1;RS=rs128353332;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148923131	148923230	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146679998;1allele=A/G;version=Hapmap2;RS=rs128353345;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148923292	148923391	.	+	.	Name=Glutamate;B73v2_pos=10:146680159;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148924265	148924364	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:146681132;1allele=T/C;version=Hapmap2;RS=rs128353354;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148924441	148924540	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146681308;1allele=A/C;version=Hapmap2;RS=rs810920321;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	148924450	148924549	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146681317;1allele=G/A;version=Hapmap2;RS=rs845039737;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148925780	148925879	.	+	.	Name=Malate;B73v2_pos=10:146682647;1allele=T/C;version=Hapmap2;RS=rs128353364;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148927490	148927589	.	+	.	Name=Malate;B73v2_pos=10:146684267;1allele=G/A;version=Hapmap2;RS=rs817605305;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148928842	148928941	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146685619;1allele=A/G;version=Hapmap2;RS=rs279018330;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148928974	148929073	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146685751;1allele=C/T;version=Hapmap2;RS=rs279018334;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148928978	148929077	.	+	.	Name=Malate;B73v2_pos=10:146685755;1allele=A/C;version=Hapmap2;RS=rs279018335;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	148929742	148929841	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146686519;1allele=G/A;version=Hapmap2;RS=rs128642699;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	148930168	148930267	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146686945;1allele=T/C;version=Hapmap2;RS=rs828465908;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148930174	148930273	.	+	.	Name=Ear_height;B73v2_pos=10:146686951;1allele=T/C;version=Hapmap2;RS=rs840080475;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148932050	148932149	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146688827;1allele=C/T;version=Hapmap2;RS=rs279018342;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	148933899	148933998	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:146690676;1allele=A/G;version=Hapmap2;RS=rs128642743;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	148933955	148934054	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:146690732;1allele=T/C;version=Hapmap2;RS=rs279018357;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148933955	148934054	.	+	.	Name=Ear_height;B73v2_pos=10:146690732;1allele=T/C;version=Hapmap2;RS=rs279018357;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148934970	148935069	.	+	.	Name=Ear_height;B73v2_pos=10:146691747;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	148960810	148960909	.	+	.	Name=Plant_height;B73v2_pos=4:5256497;1allele=C/T;version=Hapmap2;RS=rs844390800;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	148967725	148967824	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:146724487;1allele=C/T;version=Hapmap2;RS=rs1060692069;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149200376	149200475	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:146944476;1allele=/CACGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149200409	149200508	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:146944509;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149200409	149200508	.	+	.	Name=Glutamate;B73v2_pos=10:146944509;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149200680	149200779	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:146944780;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149218769	149218868	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:146962375;1allele=A/G;version=Hapmap2;RS=rs132624191;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149219875	149219974	.	+	.	Name=Plant_height;B73v2_pos=10:146963481;1allele=G/A;version=Hapmap2;RS=rs833447163;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149222114	149222213	.	+	.	Name=Total_amino_acids;B73v2_pos=10:146965721;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149222489	149222588	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:146966096;1allele=C/T;version=Hapmap1;RS=rs132624268;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149224151	149224250	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:146967758;1allele=G/A;version=Hapmap2;RS=rs128353468;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149229607	149229706	.	+	.	Name=Ear_height;B73v2_pos=10:146973214;1allele=A/T;version=Hapmap2;RS=rs128353506;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149258267	149258366	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147000171;1allele=T/A;version=Hapmap2;RS=rs128642916;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	149261506	149261605	.	+	.	Name=Ear_height;B73v2_pos=10:147003410;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149267509	149267608	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147009413;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149267994	149268093	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147009898;1allele=G/C;version=Hapmap1;RS=rs132624593;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	149268822	149268921	.	+	.	Name=Glutamate;B73v2_pos=10:147010726;1allele=C/T;version=Hapmap2;RS=rs128642960;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149300058	149300157	.	+	.	Name=Ear_height;B73v2_pos=10:147049441;1allele=A/G;version=Hapmap2;RS=rs848842831;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149303888	149303987	.	+	.	Name=Plant_height;B73v2_pos=10:147053271;1allele=T/A;version=Hapmap2;RS=rs279018696;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149305724	149305823	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147055107;1allele=A/G;version=Hapmap2;RS=rs128353585;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149306530	149306629	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147055913;1allele=C/A;version=Hapmap1;RS=rs132624656;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	149306619	149306718	.	+	.	Name=Malate;B73v2_pos=10:147056002;1allele=A/G;version=Hapmap2;RS=rs726988391;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149309964	149310063	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147059347;1allele=C/T;version=Hapmap2;RS=rs802596859;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149309964	149310063	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147059347;1allele=C/T;version=Hapmap2;RS=rs802596859;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149310336	149310435	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147059719;1allele=C/G;version=Hapmap2;RS=rs835685038;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	149311373	149311472	.	+	.	Name=Ear_height;B73v2_pos=10:147060762;1allele=G/A;version=Hapmap1;RS=rs802787910;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149311707	149311806	.	+	.	Name=Total_amino_acids;B73v2_pos=10:147061096;1allele=/ACCTAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149328916	149329015	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:147070496;1allele=C/T;version=Hapmap2;RS=rs1062009358;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149331367	149331466	.	+	.	Name=Glutamate;B73v2_pos=10:147075586;1allele=T/C;version=Hapmap2;RS=rs128643033;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149374379	149374478	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:147118304;1allele=A/T;version=Hapmap2;RS=rs818469952;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149374483	149374582	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:147118408;1allele=A/G;version=Hapmap2;RS=rs132624784;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149377524	149377623	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147121449;1allele=A/G;version=Hapmap2;RS=rs839833957;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149377942	149378041	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147121867;1allele=G/A;version=Hapmap2;RS=rs128643073;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149378029	149378128	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147121954;1allele=G/A;version=Hapmap1;RS=rs128643075;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149378615	149378714	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147122540;1allele=A/G;version=Hapmap2;RS=rs132624822;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	149380102	149380201	.	+	.	Name=Ear_height;B73v2_pos=10:147124027;1allele=G/A;version=Hapmap2;RS=rs279018851;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149380104	149380203	.	+	.	Name=Ear_height;B73v2_pos=10:147124029;1allele=A/T;version=Hapmap2;RS=rs279018852;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149381898	149381997	.	+	.	Name=Malate;B73v2_pos=10:147125824;1allele=ATGC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149382363	149382462	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147126289;1allele=C/T;version=Hapmap2;RS=rs814486308;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149394235	149394334	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147137463;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149396299	149396398	.	+	.	Name=Leaf_width;B73v2_pos=10:147139527;1allele=A/G;version=Hapmap2;RS=rs128353743;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149396408	149396507	.	+	.	Name=Leaf_width;B73v2_pos=10:147139636;1allele=A/C;version=Hapmap2;RS=rs279018929;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	149397484	149397583	.	+	.	Name=Leaf_width;B73v2_pos=10:147140712;1allele=C/T;version=Hapmap2;RS=rs128643090;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149397919	149398018	.	+	.	Name=Leaf_width;B73v2_pos=10:147141147;1allele=C/T;version=Hapmap2;RS=rs128643096;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149406601	149406700	.	+	.	Name=Days_to_silk;B73v2_pos=10:147149828;1allele=T/G;version=Hapmap2;RS=rs128643133;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	149406601	149406700	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:147149828;1allele=T/G;version=Hapmap2;RS=rs128643133;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	149406830	149406929	.	+	.	Name=Days_to_silk;B73v2_pos=10:147150057;1allele=T/C;version=Hapmap2;RS=rs128643136;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149410275	149410374	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147153502;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149411577	149411676	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147154804;1allele=T/C;version=Hapmap1;RS=rs128643177;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149411854	149411953	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147155081;1allele=C/T;version=Hapmap2;RS=rs128643186;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149412279	149412378	.	+	.	Name=Days_to_anthesis;B73v2_pos=10:147155506;1allele=G/A;version=Hapmap2;RS=rs128643195;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149412279	149412378	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147155506;1allele=G/A;version=Hapmap2;RS=rs128643195;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149418235	149418334	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147161405;1allele=C/A;version=Hapmap2;RS=rs815997806;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	149461877	149461976	.	+	.	Name=Malate;B73v2_pos=10:147205579;1allele=A/G;version=Hapmap2;RS=rs128643297;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	149463567	149463666	.	+	.	Name=Starch;B73v2_pos=10:147207269;1allele=T/A;version=Hapmap2;RS=rs829646296;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149463708	149463807	.	+	.	Name=Starch;B73v2_pos=10:147207410;1allele=A/T;version=Hapmap2;RS=rs807251303;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	149470638	149470737	.	+	.	Name=Total_amino_acids;B73v2_pos=10:147214459;1allele=A/G;version=Hapmap2;RS=rs1061377559;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149473345	149473444	.	+	.	Name=Total_amino_acids;B73v2_pos=10:147217166;1allele=C/T;version=Hapmap2;RS=rs279019246;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149474075	149474174	.	+	.	Name=Total_amino_acids;B73v2_pos=10:147217896;1allele=A/G;version=Hapmap2;RS=rs128643318;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149495889	149495988	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147238258;1allele=A/G;version=Hapmap2;RS=rs132625299;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149498712	149498811	.	+	.	Name=Nodes_above_ear;B73v2_pos=10:147241082;1allele=C/T;version=Hapmap2;RS=rs818482351;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149501577	149501676	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147243947;1allele=C/T;version=Hapmap2;RS=rs810950181;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149501695	149501794	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147244065;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149501695	149501794	.	+	.	Name=Glutamate;B73v2_pos=10:147244065;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149509356	149509455	.	+	.	Name=Leaf_width;B73v2_pos=10:147251800;1allele=A/G;version=Hapmap2;RS=rs128643362;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149509685	149509784	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:147252129;1allele=T/A;version=Hapmap2;RS=rs815239997;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	149606056	149606155	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:147350291;1allele=C/T;version=Hapmap2;RS=rs807629273;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149630795	149630894	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147375030;1allele=C/A;version=Hapmap2;RS=rs818878519;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149638626	149638725	.	+	.	Name=Leaf_width;B73v2_pos=10:147382861;1allele=A/G;version=Hapmap2;RS=rs820934523;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149640788	149640887	.	+	.	Name=Leaf_width;B73v2_pos=10:147385023;1allele=T/A;version=Hapmap2;RS=rs813366490;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149650102	149650201	.	+	.	Name=Leaf_length;B73v2_pos=10:147394337;1allele=C/T;version=Hapmap2;RS=rs808484848;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149655903	149656002	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:147400138;1allele=G/C;version=Hapmap2;RS=rs843087646;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	149707024	149707123	.	+	.	Name=Leaf_width;B73v2_pos=10:147450904;1allele=T/C;version=Hapmap2;RS=rs128354034;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149717335	149717434	.	+	.	Name=Plant_height;B73v2_pos=10:147461214;1allele=A/T;version=Hapmap2;RS=rs827434221;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	149717410	149717509	.	+	.	Name=Plant_height;B73v2_pos=10:147461289;1allele=A/G;version=Hapmap2;RS=rs132625875;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149717479	149717578	.	+	.	Name=Plant_height;B73v2_pos=10:147461358;1allele=G/C;version=Hapmap2;RS=rs803764962;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	149718077	149718176	.	+	.	Name=Plant_height;B73v2_pos=10:147461956;1allele=A/G;version=Hapmap2;RS=rs820262331;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149723041	149723140	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147466842;1allele=G/C;version=Hapmap2;RS=rs128643854;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	149723041	149723140	.	+	.	Name=Ear_height;B73v2_pos=10:147466842;1allele=G/C;version=Hapmap2;RS=rs128643854;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	149723489	149723588	.	+	.	Name=Ear_height;B73v2_pos=10:147467290;1allele=A/G;version=Hapmap2;RS=rs128643857;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149796517	149796616	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147538898;1allele=A/G;version=Hapmap2;RS=rs724293917;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149796741	149796840	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147539122;1allele=T/A;version=Hapmap2;RS=rs128643926;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	149796741	149796840	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147539122;1allele=T/A;version=Hapmap2;RS=rs128643926;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	149797009	149797108	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147539390;1allele=T/C;version=Hapmap2;RS=rs128354054;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149797130	149797229	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147539511;1allele=C/G;version=Hapmap2;RS=rs279019721;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	149797636	149797735	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147540017;1allele=A/C;version=Hapmap2;RS=rs128354060;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	149797636	149797735	.	+	.	Name=Plant_height;B73v2_pos=10:147540017;1allele=A/C;version=Hapmap2;RS=rs128354060;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	149838020	149838119	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147580402;1allele=C/A;version=Hapmap2;RS=rs724806817;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	149838024	149838123	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147580406;1allele=A/G;version=Hapmap2;RS=rs831372109;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149838024	149838123	.	+	.	Name=Plant_height;B73v2_pos=10:147580406;1allele=A/G;version=Hapmap2;RS=rs831372109;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149838024	149838123	.	+	.	Name=Ear_height;B73v2_pos=10:147580406;1allele=A/G;version=Hapmap2;RS=rs831372109;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149839308	149839407	.	+	.	Name=Plant_height;B73v2_pos=10:147581685;1allele=A/C;version=Hapmap2;RS=rs132626037;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	149839343	149839442	.	+	.	Name=Tassel_branch_number;B73v2_pos=10:147581720;1allele=C/T;version=Hapmap1;RS=rs132626039;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149851955	149852054	.	+	.	Name=Starch;B73v2_pos=10:147594332;1allele=A/C;version=Hapmap2;RS=rs128644073;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	149852070	149852169	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147594447;1allele=C/T;version=Hapmap2;RS=rs847503384;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149852996	149853095	.	+	.	Name=Glutamate;B73v2_pos=10:147595373;1allele=C/A;version=Hapmap2;RS=rs726539145;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	149853064	149853163	.	+	.	Name=Glutamate;B73v2_pos=10:147595441;1allele=C/T;version=Hapmap2;RS=rs724370505;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149857219	149857318	.	+	.	Name=Nitrate;B73v2_pos=10:147599596;1allele=G/T;version=Hapmap2;RS=rs848268864;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	149857881	149857980	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147600258;1allele=T/C;version=Hapmap2;RS=rs128644118;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149857889	149857988	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147600266;1allele=G/A;version=Hapmap2;RS=rs128644119;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	149858661	149858760	.	+	.	Name=Plant_height;B73v2_pos=10:147601038;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149859338	149859437	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147601715;1allele=C/T;version=Hapmap2;RS=rs128644125;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149859658	149859757	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147602035;1allele=T/C;version=Hapmap2;RS=rs128644128;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149864445	149864544	.	+	.	Name=Leaf_length;B73v2_pos=10:147606822;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	149864662	149864761	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147607039;1allele=T/C;version=Hapmap2;RS=rs279019872;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149865478	149865577	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147607855;1allele=T/C;version=Hapmap2;RS=rs279019881;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	149868103	149868202	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147610480;1allele=C/T;version=Hapmap2;RS=rs811156478;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	149869802	149869901	.	+	.	Name=Ear_height;B73v2_pos=10:147612179;1allele=A/T;version=Hapmap2;RS=rs838855608;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149870015	149870114	.	+	.	Name=Ear_height;B73v2_pos=10:147612392;1allele=T/G;version=Hapmap2;RS=rs847268986;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	149870015	149870114	.	+	.	Name=Plant_height;B73v2_pos=10:147612392;1allele=T/G;version=Hapmap2;RS=rs847268986;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	149961198	149961297	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147703774;1allele=A/C;version=Hapmap2;RS=rs279019927;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	149976676	149976775	.	+	.	Name=Chlorophyll_A;B73v2_pos=10:147719246;1allele=A/G;version=Hapmap2;RS=rs844877475;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149978770	149978869	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:147721340;1allele=+/-;version=Hapmap2;RS=rs846254528;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	149981268	149981367	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:147723838;1allele=G/C;version=Hapmap2;RS=rs279020052;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	149984184	149984283	.	+	.	Name=Leaf_width;B73v2_pos=10:147726754;1allele=A/G;version=Hapmap1;RS=rs132626275;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	149984208	149984307	.	+	.	Name=Leaf_width;B73v2_pos=10:147726778;1allele=A/G;version=Hapmap1;RS=rs838068081;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150077387	150077486	.	+	.	Name=Starch;B73v2_pos=10:147936072;1allele=A/G;version=Hapmap2;RS=rs811590972;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150120552	150120651	.	+	.	Name=Plant_height;B73v2_pos=10:147940011;1allele=G/T;version=Hapmap2;RS=rs827151248;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	150120557	150120656	.	+	.	Name=Plant_height;B73v2_pos=10:147940016;1allele=C/G;version=Hapmap2;RS=rs819180740;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	150120557	150120656	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147940016;1allele=C/G;version=Hapmap2;RS=rs819180740;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	150120563	150120662	.	+	.	Name=Plant_height;B73v2_pos=10:147940022;1allele=C/T;version=Hapmap2;RS=rs849348308;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150120563	150120662	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147940022;1allele=C/T;version=Hapmap2;RS=rs849348308;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150168655	150168754	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:147890652;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150175012	150175111	.	+	.	Name=Glutamate;B73v2_pos=10:147897009;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150175701	150175800	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:147897698;1allele=G/A;version=Hapmap2;RS=rs279020305;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150175948	150176047	.	+	.	Name=Leaf_length;B73v2_pos=10:147897945;1allele=C/T;version=Hapmap2;RS=rs279020307;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	150175948	150176047	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147897945;1allele=C/T;version=Hapmap2;RS=rs279020307;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	150175948	150176047	.	+	.	Name=Plant_height;B73v2_pos=10:147897945;1allele=C/T;version=Hapmap2;RS=rs279020307;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	150178439	150178538	.	+	.	Name=Plant_height;B73v2_pos=10:147900436;1allele=G/C;version=Hapmap1;RS=rs132626892;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	150178489	150178588	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147900486;1allele=A/T;version=Hapmap1;RS=rs132626897;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	150179480	150179579	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:147901477;1allele=/GCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150179739	150179838	.	+	.	Name=Ear_height;B73v2_pos=10:147901736;1allele=G/T;version=Hapmap2;RS=rs279020328;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	150179739	150179838	.	+	.	Name=Plant_height;B73v2_pos=10:147901736;1allele=G/T;version=Hapmap2;RS=rs279020328;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	150179739	150179838	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147901736;1allele=G/T;version=Hapmap2;RS=rs279020328;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	150183125	150183224	.	+	.	Name=Starch;B73v2_pos=10:147905122;1allele=A/C;version=Hapmap1;RS=rs132627016;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	150185020	150185119	.	+	.	Name=Leaf_length;B73v2_pos=10:147907017;1allele=G/T;version=Hapmap1;RS=rs132627042;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	150185654	150185753	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:147907651;1allele=A/G;version=Hapmap2;RS=rs838779867;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150217337	150217436	.	+	.	Name=Leaf_length;B73v2_pos=10:147954493;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150217458	150217557	.	+	.	Name=Plant_height;B73v2_pos=10:147954372;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150217458	150217557	.	+	.	Name=Leaf_length;B73v2_pos=10:147954372;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150217554	150217653	.	+	.	Name=Leaf_length;B73v2_pos=10:147954276;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150217565	150217664	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147954265;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150217565	150217664	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:147954265;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150217565	150217664	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:147954265;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150218200	150218299	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:147953630;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150218282	150218381	.	+	.	Name=Leaf_length;B73v2_pos=10:147953548;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150256691	150256790	.	+	.	Name=Leaf_length;B73v2_pos=10:147992351;1allele=G/A;version=Hapmap2;RS=rs838046546;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	150256797	150256896	.	+	.	Name=Leaf_length;B73v2_pos=10:147992457;1allele=G/A;version=Hapmap2;RS=rs279020501;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	150256804	150256903	.	+	.	Name=Leaf_length;B73v2_pos=10:147992464;1allele=G/A;version=Hapmap2;RS=rs279020502;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	150257380	150257479	.	+	.	Name=Leaf_length;B73v2_pos=10:147993040;1allele=C/T;version=Hapmap2;RS=rs128644616;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150257637	150257736	.	+	.	Name=Leaf_length;B73v2_pos=10:147993297;1allele=A/G;version=Hapmap2;RS=rs128644618;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	150257747	150257846	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:147993407;1allele=T/C;version=Hapmap2;RS=rs279020513;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150257747	150257846	.	+	.	Name=Plant_height;B73v2_pos=10:147993407;1allele=T/C;version=Hapmap2;RS=rs279020513;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150262628	150262727	.	+	.	Name=Leaf_length;B73v2_pos=10:147998288;1allele=G/A;version=Hapmap2;RS=rs809282070;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150274157	150274256	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:148009817;1allele=A/G;version=Hapmap2;RS=rs842618496;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150334376	150334475	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:138100162;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150354224	150354323	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:148089344;1allele=A/G;version=Hapmap2;RS=rs803738481;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150354224	150354323	.	+	.	Name=Plant_height;B73v2_pos=10:148089344;1allele=A/G;version=Hapmap2;RS=rs803738481;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150354394	150354493	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148089514;1allele=C/T;version=Hapmap2;RS=rs1061574870;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	150354404	150354503	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:148089524;1allele=T/G;version=Hapmap2;RS=rs279020584;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	150354404	150354503	.	+	.	Name=Ear_height;B73v2_pos=10:148089524;1allele=T/G;version=Hapmap2;RS=rs279020584;2ref_allele=T;3alt_allele=G
chr10	Wallace_2014	SNP	150354451	150354550	.	+	.	Name=Plant_height;B73v2_pos=10:148089571;1allele=C/T;version=Hapmap2;RS=rs279020587;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150354451	150354550	.	+	.	Name=Ear_height;B73v2_pos=10:148089571;1allele=C/T;version=Hapmap2;RS=rs279020587;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150354709	150354808	.	+	.	Name=Plant_height;B73v2_pos=10:148089829;1allele=C/G;version=Hapmap2;RS=rs845580825;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	150362027	150362126	.	+	.	Name=Nitrate;B73v2_pos=10:148097144;1allele=G/A;version=Hapmap1;RS=rs132627458;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150368904	150369003	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148104021;1allele=A/G;version=Hapmap2;RS=rs279020704;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150385999	150386098	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:148121116;1allele=C/A;version=Hapmap2;RS=rs823198634;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	150441540	150441639	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148274009;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150450812	150450911	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:148264738;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150635661	150635760	.	+	.	Name=Leaf_length;B73v2_pos=10:148414628;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150637393	150637492	.	+	.	Name=Leaf_length;B73v2_pos=10:148416360;1allele=C/T;version=Hapmap2;RS=rs128644964;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	150644444	150644543	.	+	.	Name=Leaf_length;B73v2_pos=10:148423411;1allele=/TTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150645379	150645478	.	+	.	Name=Leaf_length;B73v2_pos=10:148424346;1allele=T/C;version=Hapmap2;RS=rs1064786948;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150648410	150648509	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148427377;1allele=C/-;version=Hapmap1;RS=rs132628006;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	150651617	150651716	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=10:148430548;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150654048	150654147	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148432979;1allele=A/T;version=Hapmap2;RS=rs128354534;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	150698820	150698919	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:148502202;1allele=G/A;version=Hapmap2;RS=rs132628208;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	150703189	150703288	.	+	.	Name=Nitrate;B73v2_pos=10:148506571;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150721320	150721419	.	+	.	Name=Fumarate;B73v2_pos=10:148524702;1allele=A/G;version=Hapmap2;RS=rs279021289;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150721755	150721854	.	+	.	Name=Fumarate;B73v2_pos=10:148525137;1allele=C/T;version=Hapmap2;RS=rs128645146;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	150756691	150756790	.	+	.	Name=Sucrose;B73v2_pos=10:148565497;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150785516	150785615	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:148576425;1allele=G/A;version=Hapmap2;RS=rs828244347;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	150816810	150816909	.	+	.	Name=Southern_leaf_blight;B73v2_pos=10:148609543;1allele=C/G;version=Hapmap2;RS=rs812442794;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	150833405	150833504	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:148626140;1allele=G/A;version=Hapmap2;RS=rs822748803;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	150852955	150853054	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148645691;1allele=A/T;version=Hapmap2;RS=rs279021710;2ref_allele=T;3alt_allele=A
chr10	Wallace_2014	SNP	150876708	150876807	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:148692405;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	150906691	150906790	.	+	.	Name=Leaf_length;B73v2_pos=10:148716966;1allele=G/A;version=Hapmap2;RS=rs279021758;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	150976544	150976643	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148737094;1allele=A/T;version=Hapmap2;RS=rs805163760;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	150976940	150977039	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:148737490;1allele=G/C;version=Hapmap2;RS=rs808395056;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	150976941	150977040	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:148737491;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151027240	151027339	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148799553;1allele=T/C;version=Hapmap2;RS=rs838367912;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151043249	151043348	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148813865;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151044482	151044581	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148815098;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151044538	151044637	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:148815154;1allele=C/T;version=Hapmap2;RS=rs279021951;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151045601	151045700	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148816217;1allele=C/A;version=Hapmap2;RS=rs843310402;2ref_allele=C;3alt_allele=A
chr10	Wallace_2014	SNP	151045868	151045967	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148816484;1allele=C/G;version=Hapmap2;RS=rs128354849;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	151062347	151062446	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:148832965;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151062347	151062446	.	+	.	Name=Plant_height;B73v2_pos=10:148832965;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151062347	151062446	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:148832965;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151078018	151078117	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:148848636;1allele=G/C;version=Hapmap2;RS=rs128645573;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	151078052	151078151	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:148848670;1allele=G/A;version=Hapmap2;RS=rs128645574;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151078210	151078309	.	+	.	Name=Plant_height;B73v2_pos=10:148848828;1allele=G/A;version=Hapmap2;RS=rs831328868;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151082220	151082319	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148852838;1allele=C/G;version=Hapmap1;RS=rs132629068;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	151087525	151087624	.	+	.	Name=Glutamate;B73v2_pos=10:148858143;1allele=A/G;version=Hapmap1;RS=rs132629082;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151094432	151094531	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:148865050;1allele=A/C;version=Hapmap1;RS=rs132629089;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	151095873	151095972	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:148866491;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151118896	151118995	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148887680;1allele=T/C;version=Hapmap2;RS=rs279022149;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151149725	151149824	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148918831;1allele=C/T;version=Hapmap2;RS=rs279022171;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151168067	151168166	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:148937660;1allele=C/G;version=Hapmap2;RS=rs802022462;2ref_allele=C;3alt_allele=G
chr10	Wallace_2014	SNP	151208138	151208237	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148977925;1allele=C/T;version=Hapmap2;RS=rs279022375;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151208140	151208239	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148977927;1allele=G/T;version=Hapmap2;RS=rs279022376;2ref_allele=G;3alt_allele=T
chr10	Wallace_2014	SNP	151209765	151209864	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148979552;1allele=C/G;version=Hapmap2;RS=rs804627266;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151213043	151213142	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148982830;1allele=G/A;version=Hapmap2;RS=rs279022405;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151213079	151213178	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148982866;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151217678	151217777	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:148987465;1allele=C/T;version=Hapmap1;RS=rs132629368;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151229128	151229227	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:148998907;1allele=A/G;version=Hapmap1;RS=rs132629412;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151229491	151229590	.	+	.	Name=Height_above_ear;B73v2_pos=10:148999270;1allele=G/A;version=Hapmap2;RS=rs279022522;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151229987	151230086	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148999766;1allele=T/C;version=Hapmap2;RS=rs279022528;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151231624	151231723	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149001403;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151231633	151231732	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149001412;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151237296	151237395	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149007418;1allele=C/T;version=Hapmap2;RS=rs841193240;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151238582	151238681	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149008704;1allele=A/G;version=Hapmap2;RS=rs279022616;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151238944	151239043	.	+	.	Name=Height_above_ear;B73v2_pos=10:149009066;1allele=A/G;version=Hapmap2;RS=rs128646008;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151240198	151240297	.	+	.	Name=Height_above_ear;B73v2_pos=10:149011482;1allele=C/T;version=Hapmap2;RS=rs823480960;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151252898	151252997	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149024183;1allele=C/A;version=Hapmap2;RS=rs279022676;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	151260121	151260220	.	+	.	Name=Leaf_length;B73v2_pos=10:149031413;1allele=C/T;version=Hapmap2;RS=rs128355033;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151366346	151366445	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149161640;1allele=C/T;version=Hapmap2;RS=rs1062945030;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151405936	151406035	.	+	.	Name=Leaf_length;B73v2_pos=10:149201234;1allele=C/T;version=Hapmap2;RS=rs801750453;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151441599	151441698	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149236898;1allele=C/T;version=Hapmap2;RS=rs128355148;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151443089	151443188	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149238388;1allele=G/A;version=Hapmap2;RS=rs128646203;2ref_allele=A;3alt_allele=T
chr10	Wallace_2014	SNP	151444541	151444640	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149239839;1allele=G/A;version=Hapmap2;RS=rs128646218;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151447910	151448009	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149243209;1allele=G/A;version=Hapmap2;RS=rs279022956;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151472600	151472699	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149267916;1allele=C/T;version=Hapmap2;RS=rs279022967;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151520839	151520938	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149316260;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151520872	151520971	.	+	.	Name=Height_above_ear;B73v2_pos=10:149316293;1allele=C/T;version=Hapmap2;RS=rs279023048;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151536731	151536830	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149332152;1allele=C/T;version=Hapmap2;RS=rs128646453;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151539648	151539747	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:149335069;1allele=G/A;version=Hapmap2;RS=rs842668865;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151547604	151547703	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149343025;1allele=G/A;version=Hapmap2;RS=rs128355307;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151552510	151552609	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149347931;1allele=C/T;version=Hapmap2;RS=rs128355327;2ref_allele=T;3alt_allele=C
chr10	Wallace_2014	SNP	151559324	151559423	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:127663248;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151559946	151560045	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:149355368;1allele=A/G;version=Hapmap2;RS=rs806508873;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151575772	151575871	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:149370757;1allele=G/A;version=Hapmap2;RS=rs807903894;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151575827	151575926	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149370812;1allele=A/G;version=Hapmap1;RS=rs132629708;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151575827	151575926	.	+	.	Name=Height_above_ear;B73v2_pos=10:149370812;1allele=A/G;version=Hapmap1;RS=rs132629708;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151580906	151581005	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149375891;1allele=T/C;version=Hapmap2;RS=rs807511308;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151580906	151581005	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149375891;1allele=T/C;version=Hapmap2;RS=rs807511308;2ref_allele=C;3alt_allele=T
chr10	Wallace_2014	SNP	151591117	151591216	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149386102;1allele=A/G;version=Hapmap2;RS=rs128646624;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151591846	151591945	.	+	.	Name=Plant_height;B73v2_pos=10:149386831;1allele=A/G;version=Hapmap2;RS=rs814838555;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151591846	151591945	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=10:149386831;1allele=A/G;version=Hapmap2;RS=rs814838555;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151591846	151591945	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=10:149386831;1allele=A/G;version=Hapmap2;RS=rs814838555;2ref_allele=G;3alt_allele=A
chr10	Wallace_2014	SNP	151737539	151737638	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149531182;1allele=G/A;version=Hapmap2;RS=rs128355418;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151758288	151758387	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149544829;1allele=G/A;version=Hapmap2;RS=rs840410313;2ref_allele=A;3alt_allele=G
chr10	Wallace_2014	SNP	151771786	151771885	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149558327;1allele=C/G;version=Hapmap2;RS=rs128646966;2ref_allele=G;3alt_allele=C
chr10	Wallace_2014	SNP	151776823	151776922	.	+	.	Name=Glucose;B73v2_pos=10:149563364;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151880576	151880675	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:149662360;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr10	Wallace_2014	SNP	151922908	151923007	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:149689960;1allele=C/A;version=Hapmap2;RS=rs1061547210;2ref_allele=A;3alt_allele=C
chr10	Wallace_2014	SNP	152274171	152274270	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:150080155;1allele=C/T;version=Hapmap2;RS=rs820028555;2ref_allele=C;3alt_allele=T
chr10_151230054_151230153	Wallace_2014	SNP	151230153	1.88E-45	.	+	.	Name=Total_amino_acids;B73v2_pos=10:148999833;1allele=T/A;version=Hapmap2;RS=rs279022532;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	30188	30287	.	+	.	Name=NA;B73v2_pos=NA;1allele=NA;version=NA;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	30992	31091	.	+	.	Name=Nitrate;B73v2_pos=2:10056;1allele=C/T;version=Hapmap2;RS=rs131280498;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	56005	56104	.	+	.	Name=Stalk_strength;B73v2_pos=2:53659;1allele=T/C;version=Hapmap2;RS=rs807193269;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	72869	72968	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:70527;1allele=T/C;version=Hapmap2;RS=rs801483261;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	72885	72984	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:70543;1allele=C/T;version=Hapmap2;RS=rs840880633;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	257864	257963	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:282161;1allele=A/G;version=Hapmap2;RS=rs276599819;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	257903	258002	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:282200;1allele=A/G;version=Hapmap2;RS=rs276599820;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	819930	820029	.	+	.	Name=Nitrate;B73v2_pos=2:548458;1allele=C/T;version=Hapmap2;RS=rs837571381;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	930438	930537	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:654290;1allele=G/A;version=Hapmap2;RS=rs821237393;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	930797	930896	.	+	.	Name=Nitrate;B73v2_pos=2:654649;1allele=T/A;version=Hapmap2;RS=rs831273535;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	935905	936004	.	+	.	Name=Leaf_length;B73v2_pos=2:659687;1allele=G/T;version=Hapmap2;RS=rs131280753;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	935951	936050	.	+	.	Name=Leaf_length;B73v2_pos=2:659733;1allele=A/G;version=Hapmap2;RS=rs131280755;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	952295	952394	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:674811;1allele=G/A;version=Hapmap2;RS=rs817872569;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	957413	957512	.	+	.	Name=Leaf_length;B73v2_pos=2:679929;1allele=G/A;version=Hapmap2;RS=rs847313881;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	958724	958823	.	+	.	Name=Leaf_length;B73v2_pos=2:681240;1allele=C/T;version=Hapmap2;RS=rs815334717;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	977609	977708	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:699450;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	982910	983009	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:704751;1allele=C/T;version=Hapmap1;RS=rs131280777;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	986839	986938	.	+	.	Name=Ear_height;B73v2_pos=2:708682;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	986851	986950	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:708694;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	996980	997079	.	+	.	Name=Ear_height;B73v2_pos=2:719884;1allele=A/G;version=Hapmap2;RS=rs838917920;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	996980	997079	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:719884;1allele=A/G;version=Hapmap2;RS=rs838917920;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1029286	1029385	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:751858;1allele=C/A;version=Hapmap2;RS=rs824816828;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	1031025	1031124	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:753597;1allele=C/T;version=Hapmap2;RS=rs825402860;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1104238	1104337	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:824377;1allele=G/A;version=Hapmap2;RS=rs841788103;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1119309	1119408	.	+	.	Name=Ear_height;B73v2_pos=2:839457;1allele=C/T;version=Hapmap2;RS=rs822085593;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1123890	1123989	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:844038;1allele=A/G;version=Hapmap2;RS=rs128995897;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1131870	1131969	.	+	.	Name=Nitrate;B73v2_pos=2:852018;1allele=G/A;version=Hapmap2;RS=rs131280980;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1166842	1166941	.	+	.	Name=Nitrate;B73v2_pos=2:883579;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1170521	1170620	.	+	.	Name=Nitrate;B73v2_pos=2:879898;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1176458	1176557	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:891291;1allele=T/C;version=Hapmap2;RS=rs276600595;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1209985	1210084	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:919568;1allele=G/A;version=Hapmap2;RS=rs816661350;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1225181	1225280	.	+	.	Name=Ear_height;B73v2_pos=2:934766;1allele=T/C;version=Hapmap2;RS=rs826013389;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	1225225	1225324	.	+	.	Name=Plant_height;B73v2_pos=2:934810;1allele=T/G;version=Hapmap2;RS=rs828574427;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	1225349	1225448	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:934934;1allele=T/C;version=Hapmap2;RS=rs276600712;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1225373	1225472	.	+	.	Name=Plant_height;B73v2_pos=2:934958;1allele=G/A;version=Hapmap2;RS=rs276600713;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1231078	1231177	.	+	.	Name=Ear_height;B73v2_pos=2:940663;1allele=T/C;version=Hapmap2;RS=rs128996296;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1236524	1236623	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:950077;1allele=T/C;version=Hapmap2;RS=rs724226204;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1241032	1241131	.	+	.	Name=Ear_height;B73v2_pos=2:954585;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1244215	1244314	.	+	.	Name=Ear_height;B73v2_pos=2:957768;1allele=G/A;version=Hapmap2;RS=rs128996395;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1260906	1261005	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:982492;1allele=C/T;version=Hapmap2;RS=rs128996440;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1291603	1291702	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1017364;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1293539	1293638	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1019302;1allele=G/A;version=Hapmap2;RS=rs276600935;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1308032	1308131	.	+	.	Name=Ear_height;B73v2_pos=2:1033796;1allele=G/A;version=Hapmap2;RS=rs276600983;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1336180	1336279	.	+	.	Name=Ear_height;B73v2_pos=2:1074233;1allele=G/A;version=Hapmap2;RS=rs817158062;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1338302	1338401	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:1076355;1allele=C/A;version=Hapmap2;RS=rs820302191;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	1361405	1361504	.	+	.	Name=Ear_height;B73v2_pos=2:1091256;1allele=C/T;version=Hapmap2;RS=rs128996695;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1364685	1364784	.	+	.	Name=Ear_height;B73v2_pos=2:1094536;1allele=G/A;version=Hapmap2;RS=rs128996715;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1377618	1377717	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1141936;1allele=G/C;version=Hapmap2;RS=rs276601255;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	1440465	1440564	.	+	.	Name=Nitrate;B73v2_pos=2:1184129;1allele=T/A;version=Hapmap2;RS=rs839543233;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	1442451	1442550	.	+	.	Name=Nitrate;B73v2_pos=2:1186115;1allele=C/G;version=Hapmap2;RS=rs830164518;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	1442550	1442649	.	+	.	Name=Nitrate;B73v2_pos=2:1186214;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1443249	1443348	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1186913;1allele=T/C;version=Hapmap2;RS=rs55623248;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1467147	1467246	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1213265;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1468486	1468585	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1211926;1allele=G/A;version=Hapmap2;RS=rs820251728;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1475646	1475745	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1204782;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1506725	1506824	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1249134;1allele=T/G;version=Hapmap2;RS=rs131281362;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	1513742	1513841	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1256151;1allele=G/A;version=Hapmap2;RS=rs831987832;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1513971	1514070	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1256380;1allele=T/C;version=Hapmap2;RS=rs802791667;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1517173	1517272	.	+	.	Name=Ear_height;B73v2_pos=2:1259582;1allele=A/C;version=Hapmap2;RS=rs833917399;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	1520006	1520105	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1262415;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1520523	1520622	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1262932;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1523730	1523829	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1266139;1allele=A/G;version=Hapmap1;RS=rs131281326;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1526466	1526565	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1268875;1allele=C/G;version=Hapmap2;RS=rs55623542;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	1528122	1528221	.	+	.	Name=Ear_height;B73v2_pos=2:1270531;1allele=/GGCAA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1528880	1528979	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1271289;1allele=T/C;version=Hapmap2;RS=rs276601593;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1531471	1531570	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1273822;1allele=G/A;version=Hapmap2;RS=rs824553660;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1533045	1533144	.	+	.	Name=Ear_height;B73v2_pos=2:1275396;1allele=A/C;version=Hapmap2;RS=rs803073344;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	1537265	1537364	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1279616;1allele=A/G;version=Hapmap2;RS=rs131281251;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1537551	1537650	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1279902;1allele=A/C;version=Hapmap2;RS=rs276601630;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	1543405	1543504	.	+	.	Name=Tassel_length;B73v2_pos=2:1285756;1allele=A/G;version=Hapmap2;RS=rs276601696;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1543613	1543712	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1285964;1allele=C/T;version=Hapmap2;RS=rs276601700;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1546371	1546470	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1288722;1allele=C/T;version=Hapmap2;RS=rs839198592;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1611269	1611368	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1352978;1allele=A/G;version=Hapmap2;RS=rs848387107;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1612912	1613011	.	+	.	Name=Ear_height;B73v2_pos=2:1354621;1allele=G/A;version=Hapmap2;RS=rs276601845;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1613279	1613378	.	+	.	Name=Nitrate;B73v2_pos=2:1354988;1allele=A/G;version=Hapmap2;RS=rs837700470;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1613893	1613992	.	+	.	Name=Nitrate;B73v2_pos=2:1355602;1allele=G/A;version=Hapmap2;RS=rs846394039;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	1614848	1614947	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1356557;1allele=C/T;version=Hapmap2;RS=rs128997413;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1616957	1617056	.	+	.	Name=Ear_height;B73v2_pos=2:1358666;1allele=A/G;version=Hapmap2;RS=rs839726433;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1616957	1617056	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:1358666;1allele=A/G;version=Hapmap2;RS=rs839726433;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1619188	1619287	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1360897;1allele=C/G;version=Hapmap2;RS=rs819362358;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	1619189	1619288	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1360898;1allele=C/T;version=Hapmap2;RS=rs850104211;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1688549	1688648	.	+	.	Name=Nitrate;B73v2_pos=2:1433561;1allele=T/G;version=Hapmap2;RS=rs838628052;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	1689291	1689390	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1434303;1allele=C/A;version=Hapmap2;RS=rs1061997172;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	1690648	1690747	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1435659;1allele=+/-;version=Hapmap2;RS=rs828623004;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1711011	1711110	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1455771;1allele=G/A;version=Hapmap1;RS=rs131281714;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1713472	1713571	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1458232;1allele=A/G;version=Hapmap2;RS=rs276602015;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1764746	1764845	.	+	.	Name=Leaf_length;B73v2_pos=2:1508748;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1809175	1809274	.	+	.	Name=Nitrate;B73v2_pos=2:1537438;1allele=C/A;version=Hapmap2;RS=rs816151721;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	1816740	1816839	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1545004;1allele=G/A;version=Hapmap2;RS=rs276602160;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1820947	1821046	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1549210;1allele=G/C;version=Hapmap2;RS=rs128997727;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	1822364	1822463	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1550627;1allele=T/G;version=Hapmap1;RS=rs131281867;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	1823000	1823099	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1551263;1allele=T/C;version=Hapmap2;RS=rs825163522;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1823146	1823245	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1551409;1allele=G/C;version=Hapmap1;RS=rs131281856;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	1823428	1823527	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1551691;1allele=C/A;version=Hapmap2;RS=rs843160870;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	1823903	1824002	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1552166;1allele=C/T;version=Hapmap2;RS=rs841545623;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1824681	1824780	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1552944;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1828167	1828266	.	+	.	Name=Height_above_ear;B73v2_pos=2:1556429;1allele=A/G;version=Hapmap2;RS=rs847503622;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1828167	1828266	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1556429;1allele=A/G;version=Hapmap2;RS=rs847503622;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1835489	1835588	.	+	.	Name=Nitrate;B73v2_pos=2:1563870;1allele=A/C;version=Hapmap2;RS=rs825082381;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	1837293	1837392	.	+	.	Name=Ear_height;B73v2_pos=2:1565674;1allele=A/G;version=Hapmap2;RS=rs811224450;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1839166	1839265	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:1567547;1allele=A/T;version=Hapmap2;RS=rs128997624;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	1912657	1912756	.	+	.	Name=Nitrate;B73v2_pos=2:1642866;1allele=G/A;version=Hapmap2;RS=rs812022208;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1922538	1922637	.	+	.	Name=Nitrate;B73v2_pos=2:1652745;1allele=G/A;version=Hapmap2;RS=rs812775434;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1958611	1958710	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:1688823;1allele=C/T;version=Hapmap2;RS=rs815757621;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	1959561	1959660	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1689773;1allele=A/T;version=Hapmap1;RS=rs845933747;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	1960201	1960300	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:1690413;1allele=A/G;version=Hapmap2;RS=rs844352791;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	1965738	1965837	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1695895;1allele=G/A;version=Hapmap2;RS=rs131282429;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	1965748	1965847	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1695905;1allele=C/T;version=Hapmap2;RS=rs131282430;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1978248	1978347	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1708286;1allele=C/T;version=Hapmap2;RS=rs1064445314;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	1987720	1987819	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1717758;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	1988482	1988581	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1718520;1allele=G/A;version=Hapmap2;RS=rs824795242;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2044427	2044526	.	+	.	Name=Ear_height;B73v2_pos=2:1775426;1allele=C/T;version=Hapmap2;RS=rs276602704;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2077862	2077961	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1808863;1allele=C/T;version=Hapmap2;RS=rs833141997;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2081177	2081276	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1812178;1allele=C/T;version=Hapmap2;RS=rs128998317;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2116961	2117060	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1847962;1allele=C/T;version=Hapmap2;RS=rs128998551;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2119402	2119501	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1850403;1allele=T/G;version=Hapmap2;RS=rs832577748;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2177287	2177386	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1908765;1allele=G/A;version=Hapmap2;RS=rs839301992;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2188745	2188844	.	+	.	Name=Ear_height;B73v2_pos=2:1920223;1allele=C/G;version=Hapmap2;RS=rs128998700;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2190128	2190227	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1921606;1allele=C/T;version=Hapmap2;RS=rs1062590734;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2191196	2191295	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1922673;1allele=A/G;version=Hapmap1;RS=rs128998708;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2195531	2195630	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1927008;1allele=C/T;version=Hapmap2;RS=rs841208860;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2203248	2203347	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1934725;1allele=G/T;version=Hapmap2;RS=rs276603061;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2203301	2203400	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:1934778;1allele=C/T;version=Hapmap2;RS=rs815356057;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2203431	2203530	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1934908;1allele=A/T;version=Hapmap2;RS=rs849140817;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	2208600	2208699	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1940077;1allele=C/G;version=Hapmap2;RS=rs829178301;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	2223350	2223449	.	+	.	Name=Height_above_ear;B73v2_pos=2:1954833;1allele=/CGAGCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2223768	2223867	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1955251;1allele=/TGAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2227335	2227434	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1958818;1allele=/TGTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2227590	2227689	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1959073;1allele=A/G;version=Hapmap1;RS=rs131282912;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2227590	2227689	.	+	.	Name=Height_above_ear;B73v2_pos=2:1959073;1allele=A/G;version=Hapmap1;RS=rs131282912;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2227598	2227697	.	+	.	Name=Height_above_ear;B73v2_pos=2:1959081;1allele=A/G;version=Hapmap1;RS=rs131282913;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2228222	2228321	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:1959697;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2231609	2231708	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1963084;1allele=T/C;version=Hapmap2;RS=rs128998772;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2231609	2231708	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:1963084;1allele=T/C;version=Hapmap2;RS=rs128998772;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2232961	2233060	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1964436;1allele=T/C;version=Hapmap2;RS=rs276603142;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2241593	2241692	.	+	.	Name=Height_above_ear;B73v2_pos=2:1973068;1allele=T/C;version=Hapmap2;RS=rs276603160;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2241632	2241731	.	+	.	Name=Ear_height;B73v2_pos=2:1973107;1allele=A/C;version=Hapmap2;RS=rs128998812;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2241632	2241731	.	+	.	Name=Plant_height;B73v2_pos=2:1973107;1allele=A/C;version=Hapmap2;RS=rs128998812;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2241632	2241731	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:1973107;1allele=A/C;version=Hapmap2;RS=rs128998812;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2241734	2241833	.	+	.	Name=Plant_height;B73v2_pos=2:1973209;1allele=G/A;version=Hapmap2;RS=rs276603161;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2241883	2241982	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:1973358;1allele=/GTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2305507	2305606	.	+	.	Name=Ear_height;B73v2_pos=2:2031581;1allele=A/G;version=Hapmap2;RS=rs809716691;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2316036	2316135	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:2042110;1allele=A/G;version=Hapmap2;RS=rs838960674;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2322343	2322442	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2048417;1allele=C/T;version=Hapmap2;RS=rs810698486;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2324388	2324487	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:2050366;1allele=G/A;version=Hapmap2;RS=rs848336159;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2330683	2330782	.	+	.	Name=Plant_height;B73v2_pos=2:2056661;1allele=G/A;version=Hapmap2;RS=rs811308791;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2333456	2333555	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:2059434;1allele=C/A;version=Hapmap2;RS=rs276603371;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2333600	2333699	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:2059578;1allele=A/G;version=Hapmap2;RS=rs131283341;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2348136	2348235	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:2074114;1allele=G/C;version=Hapmap1;RS=rs726113307;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2348136	2348235	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2074114;1allele=G/C;version=Hapmap1;RS=rs726113307;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2348136	2348235	.	+	.	Name=Plant_height;B73v2_pos=2:2074114;1allele=G/C;version=Hapmap1;RS=rs726113307;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2352922	2353021	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2078900;1allele=T/C;version=Hapmap2;RS=rs844434775;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2359504	2359603	.	+	.	Name=Height_above_ear;B73v2_pos=2:2085482;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2372512	2372611	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:2097158;1allele=G/T;version=Hapmap1;RS=rs131283657;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	2375101	2375200	.	+	.	Name=Tassel_length;B73v2_pos=2:2099747;1allele=T/A;version=Hapmap2;RS=rs128999253;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	2375151	2375250	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:2099797;1allele=T/G;version=Hapmap1;RS=rs128999256;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2375151	2375250	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:2099797;1allele=T/G;version=Hapmap1;RS=rs128999256;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2381960	2382059	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2106606;1allele=G/T;version=Hapmap2;RS=rs128999311;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	2386947	2387046	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2110111;1allele=G/T;version=Hapmap2;RS=rs834646117;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2388363	2388462	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2111527;1allele=C/T;version=Hapmap2;RS=rs1062048753;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2390878	2390977	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2114042;1allele=A/G;version=Hapmap1;RS=rs131283852;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2391055	2391154	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2114219;1allele=C/T;version=Hapmap2;RS=rs131283844;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2398469	2398568	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:2121633;1allele=G/A;version=Hapmap2;RS=rs1062286823;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2398787	2398886	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2121951;1allele=G/A;version=Hapmap2;RS=rs817943393;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2398793	2398892	.	+	.	Name=Leaf_length;B73v2_pos=2:2121957;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2400601	2400700	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2123765;1allele=G/T;version=Hapmap1;RS=rs821299394;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2401446	2401545	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2124610;1allele=G/A;version=Hapmap2;RS=rs815886560;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2403317	2403416	.	+	.	Name=Ear_height;B73v2_pos=2:2126481;1allele=A/G;version=Hapmap2;RS=rs131283759;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	2446057	2446156	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2168189;1allele=G/T;version=Hapmap2;RS=rs128999402;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2447032	2447131	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2169164;1allele=T/A;version=Hapmap2;RS=rs833258367;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	2478204	2478303	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:2201943;1allele=T/C;version=Hapmap2;RS=rs276603701;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2499491	2499590	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:2223230;1allele=T/C;version=Hapmap2;RS=rs725376614;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2500296	2500395	.	+	.	Name=Plant_height;B73v2_pos=2:2224035;1allele=A/G;version=Hapmap1;RS=rs128999437;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2519460	2519559	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:2261101;1allele=A/G;version=Hapmap1;RS=rs131284073;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2530753	2530852	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:2272394;1allele=T/A;version=Hapmap2;RS=rs128999536;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	2532118	2532217	.	+	.	Name=Plant_height;B73v2_pos=2:2273759;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2532118	2532217	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2273759;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2534585	2534684	.	+	.	Name=Height_above_ear;B73v2_pos=2:2276228;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2535006	2535105	.	+	.	Name=Height_above_ear;B73v2_pos=2:2276649;1allele=A/G;version=Hapmap2;RS=rs835438131;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2535006	2535105	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:2276649;1allele=A/G;version=Hapmap2;RS=rs835438131;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2537002	2537101	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2278645;1allele=G/A;version=Hapmap2;RS=rs128999571;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2537002	2537101	.	+	.	Name=Plant_height;B73v2_pos=2:2278645;1allele=G/A;version=Hapmap2;RS=rs128999571;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2596941	2597040	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2336420;1allele=G/A;version=Hapmap2;RS=rs1064686562;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2596993	2597092	.	+	.	Name=Plant_height;B73v2_pos=2:2336472;1allele=G/A;version=Hapmap2;RS=rs1060829892;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2596993	2597092	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2336472;1allele=G/A;version=Hapmap2;RS=rs1060829892;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2599221	2599320	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2338666;1allele=A/C;version=Hapmap2;RS=rs276603900;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2621377	2621476	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2360822;1allele=G/A;version=Hapmap2;RS=rs276603923;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2621732	2621831	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:2361177;1allele=G/A;version=Hapmap2;RS=rs276603925;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2621732	2621831	.	+	.	Name=Plant_height;B73v2_pos=2:2361177;1allele=G/A;version=Hapmap2;RS=rs276603925;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2621732	2621831	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2361177;1allele=G/A;version=Hapmap2;RS=rs276603925;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2623548	2623647	.	+	.	Name=Ear_height;B73v2_pos=2:2362993;1allele=T/C;version=Hapmap2;RS=rs276603929;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2627773	2627872	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:2367218;1allele=G/T;version=Hapmap1;RS=rs128999726;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	2637501	2637600	.	+	.	Name=Plant_height;B73v2_pos=2:2376946;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2637501	2637600	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2376946;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2727374	2727473	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2451625;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2727374	2727473	.	+	.	Name=Plant_height;B73v2_pos=2:2451625;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2766020	2766119	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:2473847;1allele=A/C;version=Hapmap2;RS=rs804036743;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2777346	2777445	.	+	.	Name=Ear_height;B73v2_pos=2:2485204;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2777372	2777471	.	+	.	Name=Ear_height;B73v2_pos=2:2485230;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2777571	2777670	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:2485429;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2777937	2778036	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:2485795;1allele=/GC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2779733	2779832	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:2487591;1allele=C/G;version=Hapmap2;RS=rs128999945;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2779733	2779832	.	+	.	Name=Height_above_ear;B73v2_pos=2:2487591;1allele=C/G;version=Hapmap2;RS=rs128999945;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2779733	2779832	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2487591;1allele=C/G;version=Hapmap2;RS=rs128999945;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2779950	2780049	.	+	.	Name=Ear_row_number;B73v2_pos=2:2487808;1allele=G/A;version=Hapmap2;RS=rs834262488;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2781072	2781171	.	+	.	Name=Height_above_ear;B73v2_pos=2:2488930;1allele=C/T;version=Hapmap2;RS=rs1063146393;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2784360	2784459	.	+	.	Name=Height_above_ear;B73v2_pos=2:2492218;1allele=G/T;version=Hapmap2;RS=rs276604110;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2786588	2786687	.	+	.	Name=Ear_row_number;B73v2_pos=2:2494446;1allele=G/A;version=Hapmap2;RS=rs823953741;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2793227	2793326	.	+	.	Name=Height_above_ear;B73v2_pos=2:2501084;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2800814	2800913	.	+	.	Name=Height_above_ear;B73v2_pos=2:2508677;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2838156	2838255	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:2545836;1allele=C/T;version=Hapmap2;RS=rs131284631;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2841187	2841286	.	+	.	Name=Ear_height;B73v2_pos=2:2548867;1allele=G/A;version=Hapmap2;RS=rs841603813;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	2841583	2841682	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:2549263;1allele=C/T;version=Hapmap2;RS=rs276604309;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2842151	2842250	.	+	.	Name=Plant_height;B73v2_pos=2:2549831;1allele=G/T;version=Hapmap2;RS=rs129000107;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2843144	2843243	.	+	.	Name=Height_above_ear;B73v2_pos=2:2550824;1allele=A/G;version=Hapmap2;RS=rs129000117;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2843144	2843243	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:2550824;1allele=A/G;version=Hapmap2;RS=rs129000117;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2843852	2843951	.	+	.	Name=Ear_height;B73v2_pos=2:2551532;1allele=C/G;version=Hapmap1;RS=rs129000124;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	2856166	2856265	.	+	.	Name=Height_above_ear;B73v2_pos=2:2563846;1allele=G/A;version=Hapmap2;RS=rs835325410;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	2890873	2890972	.	+	.	Name=Tassel_length;B73v2_pos=2:2599084;1allele=A/C;version=Hapmap2;RS=rs129000175;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	2914415	2914514	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:2622627;1allele=T/A;version=Hapmap1;RS=rs131284775;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	2914866	2914965	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:2623078;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	2919923	2920022	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:2628135;1allele=T/G;version=Hapmap2;RS=rs129000236;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2967654	2967753	.	+	.	Name=Ear_height;B73v2_pos=2:2677365;1allele=C/T;version=Hapmap2;RS=rs131285017;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2970281	2970380	.	+	.	Name=Ear_height;B73v2_pos=2:2679992;1allele=A/C;version=Hapmap2;RS=rs129000324;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2970597	2970696	.	+	.	Name=Ear_height;B73v2_pos=2:2680308;1allele=G/T;version=Hapmap2;RS=rs129000333;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2970636	2970735	.	+	.	Name=Ear_height;B73v2_pos=2:2680347;1allele=A/G;version=Hapmap2;RS=rs129000336;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	2970678	2970777	.	+	.	Name=Ear_height;B73v2_pos=2:2680389;1allele=C/T;version=Hapmap2;RS=rs129000337;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2970795	2970894	.	+	.	Name=Ear_height;B73v2_pos=2:2680506;1allele=T/C;version=Hapmap2;RS=rs131285033;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	2970797	2970896	.	+	.	Name=Ear_height;B73v2_pos=2:2680508;1allele=T/C;version=Hapmap1;RS=rs131285034;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	2972759	2972858	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:2682470;1allele=T/C;version=Hapmap1;RS=rs131285070;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	2973977	2974076	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:2683688;1allele=C/A;version=Hapmap2;RS=rs276604630;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	2974957	2975056	.	+	.	Name=Height_above_ear;B73v2_pos=2:2684668;1allele=A/G;version=Hapmap2;RS=rs276604636;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	2975241	2975340	.	+	.	Name=Height_above_ear;B73v2_pos=2:2684952;1allele=G/T;version=Hapmap2;RS=rs276604639;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	3031395	3031494	.	+	.	Name=Height_above_ear;B73v2_pos=2:2747178;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3040868	3040967	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:2781972;1allele=A/G;version=Hapmap2;RS=rs818117904;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	3066567	3066666	.	+	.	Name=Starch;B73v2_pos=2:2807671;1allele=C/G;version=Hapmap2;RS=rs129000566;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3272615	3272714	.	+	.	Name=Nitrate;B73v2_pos=2:3001518;1allele=T/C;version=Hapmap2;RS=rs810219285;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3276567	3276666	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:3005466;1allele=G/A;version=Hapmap2;RS=rs801702133;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	3277274	3277373	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3006173;1allele=C/T;version=Hapmap1;RS=rs131285220;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3278081	3278180	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3006980;1allele=T/C;version=Hapmap2;RS=rs276604850;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3279114	3279213	.	+	.	Name=Total_amino_acids;B73v2_pos=2:3008013;1allele=T/C;version=Hapmap2;RS=rs276604866;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3283292	3283391	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3012188;1allele=T/A;version=Hapmap2;RS=rs806598697;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	3283927	3284026	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3012823;1allele=A/G;version=Hapmap2;RS=rs276604890;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3284359	3284458	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3013255;1allele=T/C;version=Hapmap2;RS=rs276604908;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3284450	3284549	.	+	.	Name=Nitrate;B73v2_pos=2:3013346;1allele=T/G;version=Hapmap2;RS=rs801742238;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	3284463	3284562	.	+	.	Name=Nitrate;B73v2_pos=2:3013359;1allele=G/T;version=Hapmap2;RS=rs845154874;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	3284640	3284739	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3013536;1allele=G/A;version=Hapmap2;RS=rs276604918;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3305653	3305752	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3034554;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3323933	3324032	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3054139;1allele=T/A;version=Hapmap2;RS=rs276604991;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	3351725	3351824	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3081929;1allele=C/G;version=Hapmap2;RS=rs810632644;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3363633	3363732	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:3093837;1allele=C/T;version=Hapmap1;RS=rs131285468;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3376559	3376658	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3105233;1allele=A/G;version=Hapmap2;RS=rs823286341;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3377447	3377546	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:3106121;1allele=C/G;version=Hapmap1;RS=rs131285641;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	3380118	3380217	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:3108792;1allele=C/T;version=Hapmap2;RS=rs822322901;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3380324	3380423	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:3108998;1allele=G/C;version=Hapmap1;RS=rs129000958;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3401233	3401332	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3129907;1allele=A/G;version=Hapmap1;RS=rs131285570;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3405089	3405188	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:3133763;1allele=T/C;version=Hapmap2;RS=rs833639696;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3458473	3458572	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:3180276;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3460010	3460109	.	+	.	Name=Ear_height;B73v2_pos=2:3181813;1allele=C/T;version=Hapmap2;RS=rs131285723;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3461794	3461893	.	+	.	Name=Ear_height;B73v2_pos=2:3183597;1allele=C/G;version=Hapmap2;RS=rs842371899;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3462292	3462391	.	+	.	Name=Ear_height;B73v2_pos=2:3184095;1allele=A/T;version=Hapmap2;RS=rs725267757;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	3467397	3467496	.	+	.	Name=Ear_height;B73v2_pos=2:3189200;1allele=T/C;version=Hapmap2;RS=rs829812207;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3502840	3502939	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:3224642;1allele=G/A;version=Hapmap2;RS=rs129001093;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3503779	3503878	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:3225581;1allele=G/C;version=Hapmap1;RS=rs129001102;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	3504127	3504226	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3225929;1allele=C/G;version=Hapmap2;RS=rs131285823;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3505544	3505643	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:3227346;1allele=G/T;version=Hapmap2;RS=rs276605418;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	3507548	3507647	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:3229350;1allele=C/A;version=Hapmap2;RS=rs129001124;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	3509819	3509918	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:3231621;1allele=C/T;version=Hapmap2;RS=rs276605434;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3509819	3509918	.	+	.	Name=Height_above_ear;B73v2_pos=2:3231621;1allele=C/T;version=Hapmap2;RS=rs276605434;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3524857	3524956	.	+	.	Name=Height_above_ear;B73v2_pos=2:3246659;1allele=C/T;version=Hapmap2;RS=rs276605443;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3575000	3575099	.	+	.	Name=Height_above_ear;B73v2_pos=2:3276365;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3597254	3597353	.	+	.	Name=Height_above_ear;B73v2_pos=2:3316135;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3606719	3606818	.	+	.	Name=Height_above_ear;B73v2_pos=2:3306674;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3619204	3619303	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:3294188;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3627714	3627813	.	+	.	Name=Tassel_length;B73v2_pos=2:3335375;1allele=/GCAGCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3629894	3629993	.	+	.	Name=Fructose;B73v2_pos=2:3337555;1allele=T/C;version=Hapmap1;RS=rs840273978;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3631377	3631476	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3339038;1allele=T/A;version=Hapmap1;RS=rs131286003;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3631613	3631712	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:3339274;1allele=/AAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3634218	3634317	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3341879;1allele=G/C;version=Hapmap2;RS=rs835335836;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	3634334	3634433	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3341995;1allele=G/A;version=Hapmap2;RS=rs816252054;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	3657965	3658064	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3366281;1allele=T/A;version=Hapmap2;RS=rs820671987;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	3659367	3659466	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3367683;1allele=A/G;version=Hapmap2;RS=rs726869122;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3660383	3660482	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3368699;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3669291	3669390	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3377607;1allele=C/T;version=Hapmap2;RS=rs276605527;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3673623	3673722	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3381939;1allele=C/T;version=Hapmap2;RS=rs276605561;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3674154	3674253	.	+	.	Name=Total_amino_acids;B73v2_pos=2:3382470;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3674321	3674420	.	+	.	Name=Cob_diameter;B73v2_pos=2:3382637;1allele=A/G;version=Hapmap2;RS=rs811208103;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3678382	3678481	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3386700;1allele=G/A;version=Hapmap2;RS=rs820152356;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	3702094	3702193	.	+	.	Name=Fructose;B73v2_pos=2:3410411;1allele=C/G;version=Hapmap2;RS=rs276605652;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	3711969	3712068	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3420287;1allele=C/G;version=Hapmap2;RS=rs831919639;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3711998	3712097	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3420316;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3714622	3714721	.	+	.	Name=Leaf_length;B73v2_pos=2:3422940;1allele=C/T;version=Hapmap2;RS=rs842030938;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3716619	3716718	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3424937;1allele=C/T;version=Hapmap2;RS=rs807568879;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3718944	3719044	.	+	.	Name=Ear_row_number;B73v2_pos=2:3427264;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3722624	3722723	.	+	.	Name=Leaf_length;B73v2_pos=2:3430942;1allele=T/C;version=Hapmap2;RS=rs839776403;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3807990	3808089	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:3543111;1allele=G/A;version=Hapmap2;RS=rs810838633;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3809290	3809389	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3544411;1allele=T/A;version=Hapmap2;RS=rs818125980;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	3810462	3810561	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3545583;1allele=A/T;version=Hapmap2;RS=rs816971723;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	3811677	3811776	.	+	.	Name=Cob_diameter;B73v2_pos=2:3546798;1allele=C/G;version=Hapmap2;RS=rs129001505;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3813789	3813888	.	+	.	Name=Cob_diameter;B73v2_pos=2:3548910;1allele=C/T;version=Hapmap2;RS=rs804181376;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3818418	3818517	.	+	.	Name=Fructose;B73v2_pos=2:3553537;1allele=A/G;version=Hapmap2;RS=rs129001555;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3818954	3819053	.	+	.	Name=Fructose;B73v2_pos=2:3554073;1allele=T/C;version=Hapmap2;RS=rs129001561;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3821392	3821491	.	+	.	Name=Starch;B73v2_pos=2:3556511;1allele=T/G;version=Hapmap2;RS=rs276605856;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	3821392	3821491	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:3556511;1allele=T/G;version=Hapmap2;RS=rs276605856;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	3824862	3824961	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3559981;1allele=G/A;version=Hapmap2;RS=rs824120617;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	3825009	3825108	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3560128;1allele=A/T;version=Hapmap2;RS=rs819901181;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	3827053	3827152	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3562172;1allele=G/A;version=Hapmap1;RS=rs131286488;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	3828154	3828253	.	+	.	Name=Starch;B73v2_pos=2:3563273;1allele=G/C;version=Hapmap1;RS=rs131286540;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	3830044	3830143	.	+	.	Name=Height_above_ear;B73v2_pos=2:3565163;1allele=T/G;version=Hapmap1;RS=rs131286572;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	3853308	3853407	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3588425;1allele=A/G;version=Hapmap2;RS=rs816232322;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3853648	3853747	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3588765;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3857950	3858049	.	+	.	Name=Glucose;B73v2_pos=2:3593067;1allele=C/T;version=Hapmap2;RS=rs1060650125;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3861003	3861102	.	+	.	Name=Glucose;B73v2_pos=2:3596119;1allele=A/T;version=Hapmap1;RS=rs131286805;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	3861355	3861454	.	+	.	Name=Glucose;B73v2_pos=2:3596471;1allele=T/G;version=Hapmap2;RS=rs820465910;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	3861502	3861601	.	+	.	Name=Glucose;B73v2_pos=2:3596618;1allele=C/T;version=Hapmap2;RS=rs129001787;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3861502	3861601	.	+	.	Name=Fructose;B73v2_pos=2:3596618;1allele=C/T;version=Hapmap2;RS=rs129001787;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	3861555	3861654	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:3596671;1allele=C/G;version=Hapmap1;RS=rs131286819;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3865014	3865113	.	+	.	Name=Fructose;B73v2_pos=2:3600130;1allele=/GG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3871837	3871936	.	+	.	Name=Fructose;B73v2_pos=2:3606953;1allele=A/C;version=Hapmap2;RS=rs276606154;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	3874497	3874596	.	+	.	Name=Starch;B73v2_pos=2:3609613;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	3926856	3926955	.	+	.	Name=Starch;B73v2_pos=2:3672883;1allele=A/C;version=Hapmap2;RS=rs276606310;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	3971348	3971447	.	+	.	Name=Fructose;B73v2_pos=2:3688000;1allele=T/A;version=Hapmap2;RS=rs276606382;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	3971375	3971474	.	+	.	Name=Fructose;B73v2_pos=2:3688027;1allele=G/C;version=Hapmap2;RS=rs276606383;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	3982077	3982176	.	+	.	Name=Tassel_length;B73v2_pos=2:3698728;1allele=T/C;version=Hapmap2;RS=rs845886698;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	3982170	3982269	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:3698821;1allele=G/A;version=Hapmap2;RS=rs131286946;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	3992860	3992959	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:3709342;1allele=A/C;version=Hapmap2;RS=rs276606474;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	4056915	4057014	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3771740;1allele=G/A;version=Hapmap2;RS=rs838063319;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4059012	4059111	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:3773837;1allele=A/G;version=Hapmap2;RS=rs276606674;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4059730	4059829	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:3774555;1allele=G/A;version=Hapmap2;RS=rs276606688;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4065456	4065555	.	+	.	Name=Fructose;B73v2_pos=2:3780281;1allele=C/T;version=Hapmap2;RS=rs129002020;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4074124	4074223	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:3792521;1allele=C/T;version=Hapmap2;RS=rs832510344;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4089910	4090009	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:3808307;1allele=A/C;version=Hapmap2;RS=rs806546629;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	4127154	4127253	.	+	.	Name=Leaf_length;B73v2_pos=2:3820388;1allele=T/C;version=Hapmap2;RS=rs1061003899;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4136212	4136311	.	+	.	Name=Height_above_ear;B73v2_pos=2:3856631;1allele=C/A;version=Hapmap2;RS=rs1062532580;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	4137107	4137206	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:3857526;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4137969	4138068	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:3858388;1allele=A/G;version=Hapmap2;RS=rs845909185;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4143985	4144084	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:3864404;1allele=AGCT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4144353	4144452	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:3864772;1allele=G/C;version=Hapmap1;RS=rs131287223;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4144588	4144687	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:3865007;1allele=G/C;version=Hapmap2;RS=rs131287235;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	4144695	4144794	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:3865114;1allele=A/G;version=Hapmap1;RS=rs131287239;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4146524	4146623	.	+	.	Name=Height_above_ear;B73v2_pos=2:3866943;1allele=G/T;version=Hapmap2;RS=rs846989021;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	4148345	4148444	.	+	.	Name=Glucose;B73v2_pos=2:3868764;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4150690	4150789	.	+	.	Name=Glucose;B73v2_pos=2:3871109;1allele=C/T;version=Hapmap2;RS=rs276606859;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4152257	4152356	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3872676;1allele=T/A;version=Hapmap2;RS=rs825167542;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	4156905	4157004	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3877324;1allele=G/A;version=Hapmap2;RS=rs276606895;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4159647	4159746	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:3880066;1allele=A/G;version=Hapmap2;RS=rs840976274;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4171228	4171327	.	+	.	Name=Height_above_ear;B73v2_pos=2:3892415;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4172280	4172379	.	+	.	Name=Height_above_ear;B73v2_pos=2:3893463;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4182531	4182630	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:3903717;1allele=C/A;version=Hapmap2;RS=rs129002194;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	4201768	4201867	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3922743;1allele=C/A;version=Hapmap2;RS=rs823804376;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	4201991	4202090	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:3922966;1allele=G/C;version=Hapmap2;RS=rs129002463;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4202531	4202630	.	+	.	Name=Glucose;B73v2_pos=2:3923506;1allele=G/A;version=Hapmap2;RS=rs827767719;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4202546	4202645	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:3923521;1allele=A/G;version=Hapmap2;RS=rs842192185;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4211868	4211967	.	+	.	Name=Glucose;B73v2_pos=2:3932782;1allele=C/T;version=Hapmap2;RS=rs276607060;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4215562	4215661	.	+	.	Name=Glucose;B73v2_pos=2:3936476;1allele=T/C;version=Hapmap1;RS=rs131287589;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4217545	4217644	.	+	.	Name=Glucose;B73v2_pos=2:3938459;1allele=C/G;version=Hapmap2;RS=rs129002335;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4218513	4218612	.	+	.	Name=Glucose;B73v2_pos=2:3939427;1allele=C/T;version=Hapmap2;RS=rs810800823;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4222187	4222286	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:3943101;1allele=G/A;version=Hapmap2;RS=rs812496610;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4222445	4222544	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:3943359;1allele=C/A;version=Hapmap2;RS=rs835656581;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	4267600	4267699	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:3973718;1allele=G/A;version=Hapmap2;RS=rs839065788;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4268601	4268700	.	+	.	Name=Glucose;B73v2_pos=2:3974719;1allele=G/A;version=Hapmap2;RS=rs725133850;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4284653	4284752	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:3990782;1allele=G/T;version=Hapmap1;RS=rs131287367;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4321414	4321513	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4039596;1allele=G/A;version=Hapmap2;RS=rs825212682;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4327237	4327336	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4045421;1allele=C/A;version=Hapmap2;RS=rs834507891;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4330275	4330374	.	+	.	Name=Fructose;B73v2_pos=2:4048459;1allele=A/G;version=Hapmap2;RS=rs838205266;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4336972	4337071	.	+	.	Name=Fructose;B73v2_pos=2:4055175;1allele=G/A;version=Hapmap2;RS=rs131287836;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4339366	4339465	.	+	.	Name=Fructose;B73v2_pos=2:4057569;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4339366	4339465	.	+	.	Name=Glucose;B73v2_pos=2:4057569;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4339366	4339465	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:4057569;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4339635	4339734	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4057838;1allele=A/G;version=Hapmap2;RS=rs129002566;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4340350	4340449	.	+	.	Name=Fructose;B73v2_pos=2:4058553;1allele=A/T;version=Hapmap2;RS=rs804664000;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	4389391	4389490	.	+	.	Name=Glucose;B73v2_pos=2:4163097;1allele=G/A;version=Hapmap2;RS=rs129002606;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4391066	4391165	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:4164772;1allele=G/T;version=Hapmap2;RS=rs276607290;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	4393026	4393125	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4166732;1allele=C/T;version=Hapmap2;RS=rs837676968;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4393133	4393232	.	+	.	Name=Starch;B73v2_pos=2:4166839;1allele=G/A;version=Hapmap2;RS=rs131287984;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4393644	4393743	.	+	.	Name=Glucose;B73v2_pos=2:4167350;1allele=A/G;version=Hapmap2;RS=rs129002635;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4394340	4394439	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4168046;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4395495	4395594	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4169201;1allele=A/G;version=Hapmap1;RS=rs131288009;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4402091	4402190	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4175797;1allele=A/G;version=Hapmap2;RS=rs826399436;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4403255	4403354	.	+	.	Name=Glucose;B73v2_pos=2:4176964;1allele=A/G;version=Hapmap2;RS=rs809437302;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4405467	4405566	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4179174;1allele=A/T;version=Hapmap2;RS=rs276607397;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	4406340	4406439	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:4180047;1allele=C/T;version=Hapmap2;RS=rs276607405;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4407078	4407177	.	+	.	Name=Tassel_length;B73v2_pos=2:4180785;1allele=G/C;version=Hapmap2;RS=rs276607412;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	4412703	4412802	.	+	.	Name=Height_above_ear;B73v2_pos=2:4186410;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4414004	4414103	.	+	.	Name=Glucose;B73v2_pos=2:4187711;1allele=G/A;version=Hapmap2;RS=rs131288150;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4417800	4417899	.	+	.	Name=Days_to_silk;B73v2_pos=2:4191507;1allele=T/C;version=Hapmap2;RS=rs811349307;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4419207	4419306	.	+	.	Name=Total_amino_acids;B73v2_pos=2:4192914;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4419424	4419523	.	+	.	Name=Fructose;B73v2_pos=2:4193131;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4419718	4419817	.	+	.	Name=Glucose;B73v2_pos=2:4193425;1allele=A/G;version=Hapmap1;RS=rs131288253;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4429531	4429630	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:4203238;1allele=T/C;version=Hapmap1;RS=rs131288264;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	4433627	4433726	.	+	.	Name=Fructose;B73v2_pos=2:4204791;1allele=C/A;version=Hapmap2;RS=rs129002830;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	4437681	4437780	.	+	.	Name=Glucose;B73v2_pos=2:4208845;1allele=G/T;version=Hapmap2;RS=rs129002855;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	4442414	4442513	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4213575;1allele=A/C;version=Hapmap2;RS=rs131288422;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	4443300	4443399	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4214461;1allele=A/G;version=Hapmap2;RS=rs824509038;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4494903	4495002	.	+	.	Name=Glucose;B73v2_pos=2:4260986;1allele=T/C;version=Hapmap2;RS=rs129002888;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4495217	4495316	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4261300;1allele=G/A;version=Hapmap2;RS=rs812309271;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4495218	4495317	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4261301;1allele=A/G;version=Hapmap2;RS=rs817052025;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4500464	4500563	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:4101830;1allele=G/A;version=Hapmap2;RS=rs129002580;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4510359	4510458	.	+	.	Name=Ear_row_number;B73v2_pos=2:4269870;1allele=T/C;version=Hapmap2;RS=rs825315632;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4529732	4529831	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4289334;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4529736	4529835	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4289338;1allele=G/C;version=Hapmap2;RS=rs820561972;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4530106	4530205	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4289708;1allele=C/A;version=Hapmap2;RS=rs826310493;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	4532416	4532515	.	+	.	Name=Ear_row_number;B73v2_pos=2:4292018;1allele=C/G;version=Hapmap1;RS=rs131288793;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4533612	4533711	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:4293214;1allele=CAT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4533709	4533808	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:4293311;1allele=T/C;version=Hapmap2;RS=rs129003031;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4533816	4533915	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:4293418;1allele=G/A;version=Hapmap2;RS=rs813980198;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4533842	4533941	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:4293444;1allele=G/A;version=Hapmap1;RS=rs131288836;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4535460	4535559	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4295062;1allele=G/C;version=Hapmap1;RS=rs131288870;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4536553	4536652	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4296155;1allele=C/G;version=Hapmap2;RS=rs834057557;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4536928	4537027	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4296530;1allele=T/C;version=Hapmap2;RS=rs129003045;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4538228	4538327	.	+	.	Name=Cob_diameter;B73v2_pos=2:4297830;1allele=A/G;version=Hapmap2;RS=rs827095277;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	4539588	4539687	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4299190;1allele=C/T;version=Hapmap2;RS=rs807632542;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4541836	4541935	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:4301438;1allele=A/G;version=Hapmap2;RS=rs828646016;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4543163	4543262	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4302765;1allele=A/G;version=Hapmap2;RS=rs276607725;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4547131	4547230	.	+	.	Name=Malate;B73v2_pos=2:4306733;1allele=A/G;version=Hapmap1;RS=rs276607742;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4547134	4547233	.	+	.	Name=Malate;B73v2_pos=2:4306736;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4548120	4548219	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4307722;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4548137	4548236	.	+	.	Name=Malate;B73v2_pos=2:4307739;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4548152	4548251	.	+	.	Name=Malate;B73v2_pos=2:4307754;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4552310	4552409	.	+	.	Name=Ear_row_number;B73v2_pos=2:4311911;1allele=C/T;version=Hapmap2;RS=rs276607777;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4582929	4583028	.	+	.	Name=Glucose;B73v2_pos=2:4343048;1allele=A/T;version=Hapmap2;RS=rs129002929;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4584379	4584478	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4344498;1allele=A/G;version=Hapmap2;RS=rs843160174;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4601943	4602042	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:4369727;1allele=/CTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4645024	4645123	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:4415625;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4667754	4667853	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:4437365;1allele=T/C;version=Hapmap1;RS=rs131289188;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	4696271	4696370	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:4466902;1allele=G/A;version=Hapmap2;RS=rs804126560;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4801476	4801575	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:4571512;1allele=G/C;version=Hapmap2;RS=rs129003402;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4802734	4802833	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:4572770;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4805426	4805525	.	+	.	Name=Days_to_silk;B73v2_pos=2:4575462;1allele=+/-;version=Hapmap2;RS=rs803272869;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4810997	4811096	.	+	.	Name=Cob_diameter;B73v2_pos=2:4581035;1allele=A/G;version=Hapmap2;RS=rs802997923;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4816252	4816351	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4586290;1allele=C/T;version=Hapmap2;RS=rs828653901;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4853341	4853440	.	+	.	Name=Glucose;B73v2_pos=2:4621723;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4858974	4859073	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4627354;1allele=C/T;version=Hapmap2;RS=rs727354456;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4862638	4862737	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4631018;1allele=G/A;version=Hapmap2;RS=rs820064629;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4865519	4865618	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4633899;1allele=C/T;version=Hapmap2;RS=rs825341943;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4869107	4869206	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4637485;1allele=G/C;version=Hapmap2;RS=rs276608385;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	4887727	4887826	.	+	.	Name=Glucose;B73v2_pos=2:4656146;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4888633	4888732	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4657052;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4889563	4889662	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4657982;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	4896392	4896491	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4664811;1allele=G/T;version=Hapmap2;RS=rs131289523;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	4897413	4897512	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4665832;1allele=G/T;version=Hapmap2;RS=rs828375919;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	4903192	4903291	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4671611;1allele=C/T;version=Hapmap1;RS=rs131289617;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4907401	4907500	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4675820;1allele=/TATA;version=Hapmap1;RS=rs828510580;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	4907402	4907501	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:4675821;1allele=C/G;version=Hapmap1;RS=rs131289671;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	4908498	4908597	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4676917;1allele=C/G;version=Hapmap2;RS=rs129003581;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	4909146	4909245	.	+	.	Name=Cob_diameter;B73v2_pos=2:4677565;1allele=G/A;version=Hapmap2;RS=rs833310133;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	4920099	4920198	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4688519;1allele=A/T;version=Hapmap2;RS=rs804653857;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	4923374	4923473	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4691794;1allele=G/A;version=Hapmap2;RS=rs276608536;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	4924004	4924103	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4692424;1allele=T/C;version=Hapmap2;RS=rs276608543;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4924938	4925037	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4693358;1allele=C/G;version=Hapmap1;RS=rs131289724;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	4927892	4927991	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4696312;1allele=T/C;version=Hapmap2;RS=rs129003696;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5010468	5010567	.	+	.	Name=Glucose;B73v2_pos=2:4781430;1allele=C/T;version=Hapmap2;RS=rs276608612;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5013310	5013409	.	+	.	Name=Glucose;B73v2_pos=2:4784272;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5025695	5025794	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4796657;1allele=T/C;version=Hapmap2;RS=rs832777137;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5070406	5070505	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:4833940;1allele=T/G;version=Hapmap1;RS=rs131289856;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	5076895	5076994	.	+	.	Name=Malate;B73v2_pos=2:4840429;1allele=C/G;version=Hapmap1;RS=rs131289882;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5077080	5077179	.	+	.	Name=Malate;B73v2_pos=2:4840614;1allele=T/C;version=Hapmap2;RS=rs131289886;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5083681	5083780	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:4847215;1allele=G/C;version=Hapmap2;RS=rs276608747;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5083681	5083780	.	+	.	Name=Malate;B73v2_pos=2:4847215;1allele=G/C;version=Hapmap2;RS=rs276608747;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5083765	5083864	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:4847299;1allele=C/T;version=Hapmap2;RS=rs847081951;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5083777	5083876	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:4847311;1allele=T/C;version=Hapmap2;RS=rs129003906;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5085727	5085826	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4849261;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5086242	5086341	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:4849776;1allele=A/C;version=Hapmap2;RS=rs129003923;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	5122771	5122870	.	+	.	Name=Ear_height;B73v2_pos=2:4888931;1allele=G/C;version=Hapmap2;RS=rs839424182;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5123022	5123121	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4889182;1allele=A/G;version=Hapmap2;RS=rs828547314;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	5123553	5123652	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:4889713;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5123860	5123959	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:4890020;1allele=G/A;version=Hapmap1;RS=rs131290070;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5126556	5126655	.	+	.	Name=Protein;B73v2_pos=2:4892714;1allele=T/C;version=Hapmap2;RS=rs131290142;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5126781	5126880	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4892939;1allele=AT/;version=Hapmap1;RS=rs131290153;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	5130262	5130361	.	+	.	Name=Sucrose;B73v2_pos=2:4896420;1allele=G/A;version=Hapmap2;RS=rs129004038;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	5156804	5156903	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4926100;1allele=T/C;version=Hapmap2;RS=rs837149198;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5181750	5181849	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:4988818;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5202968	5203067	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5010036;1allele=C/A;version=Hapmap2;RS=rs276609034;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	5277529	5277628	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5065274;1allele=G/T;version=Hapmap2;RS=rs276609176;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	5279923	5280022	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5067668;1allele=/TTCTGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5285507	5285606	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:5073252;1allele=G/A;version=Hapmap1;RS=rs131290355;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	5294847	5294946	.	+	.	Name=Cob_diameter;B73v2_pos=2:5082588;1allele=C/T;version=Hapmap1;RS=rs823416641;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5298121	5298220	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5085862;1allele=T/A;version=Hapmap2;RS=rs803595883;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	5312045	5312144	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5107818;1allele=G/C;version=Hapmap2;RS=rs129004468;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5379549	5379648	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:5175526;1allele=G/A;version=Hapmap2;RS=rs848872886;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	5425148	5425247	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:5316284;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5436760	5436859	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:5211906;1allele=T/G;version=Hapmap2;RS=rs841889566;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	5444449	5444548	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:5219595;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5444836	5444935	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5219982;1allele=G/C;version=Hapmap2;RS=rs276609331;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5445332	5445431	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5220478;1allele=T/C;version=Hapmap2;RS=rs831550049;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5451853	5451952	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:5226999;1allele=G/C;version=Hapmap1;RS=rs825408238;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5455370	5455469	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5230514;1allele=C/G;version=Hapmap1;RS=rs131290750;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5516191	5516290	.	+	.	Name=Days_to_silk;B73v2_pos=2:5290237;1allele=C/G;version=Hapmap2;RS=rs131290840;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5662254	5662353	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5453999;1allele=G/C;version=Hapmap2;RS=rs847966916;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5663475	5663574	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:5455220;1allele=G/A;version=Hapmap2;RS=rs832803887;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	5666029	5666128	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:5457780;1allele=T/C;version=Hapmap1;RS=rs724824110;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5668855	5668954	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:5460606;1allele=A/G;version=Hapmap2;RS=rs131291103;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	5720070	5720169	.	+	.	Name=Tassel_length;B73v2_pos=2:5515707;1allele=A/G;version=Hapmap2;RS=rs131291376;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	5720410	5720509	.	+	.	Name=Tassel_length;B73v2_pos=2:5516047;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5727608	5727707	.	+	.	Name=Tassel_length;B73v2_pos=2:5523242;1allele=G/C;version=Hapmap2;RS=rs276609607;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5750747	5750846	.	+	.	Name=Starch;B73v2_pos=2:5546381;1allele=G/C;version=Hapmap2;RS=rs815648429;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5750876	5750975	.	+	.	Name=Starch;B73v2_pos=2:5546510;1allele=C/G;version=Hapmap2;RS=rs829545456;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5751352	5751451	.	+	.	Name=Starch;B73v2_pos=2:5546986;1allele=C/A;version=Hapmap1;RS=rs131291541;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5751738	5751837	.	+	.	Name=Starch;B73v2_pos=2:5547372;1allele=G/T;version=Hapmap1;RS=rs131291554;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	5752581	5752680	.	+	.	Name=Days_to_silk;B73v2_pos=2:5548215;1allele=C/G;version=Hapmap2;RS=rs131291585;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5752831	5752930	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5548465;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5753113	5753212	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5548747;1allele=ACG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5753811	5753910	.	+	.	Name=Tassel_length;B73v2_pos=2:5549445;1allele=A/C;version=Hapmap2;RS=rs845359069;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	5756377	5756476	.	+	.	Name=Total_amino_acids;B73v2_pos=2:5552011;1allele=C/A;version=Hapmap2;RS=rs129004958;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5765048	5765147	.	+	.	Name=Tassel_length;B73v2_pos=2:5560678;1allele=C/G;version=Hapmap2;RS=rs1064383567;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5765219	5765318	.	+	.	Name=Malate;B73v2_pos=2:5560849;1allele=A/T;version=Hapmap2;RS=rs822374901;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	5766907	5767006	.	+	.	Name=Malate;B73v2_pos=2:5562537;1allele=T/C;version=Hapmap2;RS=rs1062145910;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5766968	5767067	.	+	.	Name=Malate;B73v2_pos=2:5562598;1allele=T/C;version=Hapmap2;RS=rs1062444642;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5767986	5768085	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5563616;1allele=G/T;version=Hapmap2;RS=rs131291758;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	5768686	5768785	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:5564316;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5770874	5770973	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:5566504;1allele=G/A;version=Hapmap1;RS=rs131291844;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	5779997	5780096	.	+	.	Name=Sucrose;B73v2_pos=2:5575627;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5780077	5780176	.	+	.	Name=Sucrose;B73v2_pos=2:5575707;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	5788261	5788360	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:5583891;1allele=A/T;version=Hapmap2;RS=rs129005096;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	5889687	5889786	.	+	.	Name=Malate;B73v2_pos=2:5681634;1allele=G/T;version=Hapmap2;RS=rs276609899;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	5893186	5893285	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5685133;1allele=C/G;version=Hapmap2;RS=rs131291983;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5895089	5895188	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5687036;1allele=C/G;version=Hapmap2;RS=rs815484292;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	5896213	5896312	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5688160;1allele=A/G;version=Hapmap2;RS=rs826404322;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	5897366	5897465	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5689313;1allele=T/C;version=Hapmap2;RS=rs276609974;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	5899564	5899663	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5691511;1allele=G/A;version=Hapmap2;RS=rs129005133;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	5899737	5899836	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5691684;1allele=C/T;version=Hapmap2;RS=rs827618820;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5899787	5899886	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5691734;1allele=C/A;version=Hapmap2;RS=rs129005130;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	5923710	5923809	.	+	.	Name=Starch;B73v2_pos=2:5711624;1allele=C/T;version=Hapmap2;RS=rs276610070;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	5929147	5929246	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5717061;1allele=G/A;version=Hapmap2;RS=rs276610101;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	5942133	5942232	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5730051;1allele=C/G;version=Hapmap2;RS=rs1063056260;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	5965364	5965463	.	+	.	Name=Fructose;B73v2_pos=2:5754628;1allele=G/T;version=Hapmap2;RS=rs276610167;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	5967057	5967156	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5756321;1allele=C/T;version=Hapmap2;RS=rs276610178;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	6048978	6049077	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:5838257;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6054198	6054297	.	+	.	Name=Leaf_width;B73v2_pos=2:5843477;1allele=G/A;version=Hapmap2;RS=rs129005467;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	6059784	6059883	.	+	.	Name=Tassel_length;B73v2_pos=2:5849064;1allele=G/C;version=Hapmap1;RS=rs131292424;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	6060576	6060675	.	+	.	Name=Total_amino_acids;B73v2_pos=2:5849856;1allele=C/T;version=Hapmap1;RS=rs131292430;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	6061702	6061801	.	+	.	Name=Tassel_length;B73v2_pos=2:5850982;1allele=G/T;version=Hapmap2;RS=rs822895585;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	6062250	6062349	.	+	.	Name=Tassel_length;B73v2_pos=2:5851530;1allele=/ACTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6069089	6069188	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:5858369;1allele=C/A;version=Hapmap2;RS=rs276610461;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	6073084	6073183	.	+	.	Name=Malate;B73v2_pos=2:5862364;1allele=C/T;version=Hapmap2;RS=rs1062153236;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	6074273	6074372	.	+	.	Name=Malate;B73v2_pos=2:5863553;1allele=C/T;version=Hapmap2;RS=rs129005586;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	6074547	6074646	.	+	.	Name=Malate;B73v2_pos=2:5863827;1allele=G/A;version=Hapmap2;RS=rs129005589;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	6074584	6074683	.	+	.	Name=Malate;B73v2_pos=2:5863864;1allele=T/C;version=Hapmap2;RS=rs276610539;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	6074635	6074734	.	+	.	Name=Malate;B73v2_pos=2:5863915;1allele=A/T;version=Hapmap2;RS=rs276610543;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	6114380	6114479	.	+	.	Name=Total_amino_acids;B73v2_pos=2:5903664;1allele=T/C;version=Hapmap2;RS=rs129005696;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	6115235	6115334	.	+	.	Name=Tassel_length;B73v2_pos=2:5904519;1allele=T/C;version=Hapmap1;RS=rs129005699;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	6122198	6122297	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:5911480;1allele=C/T;version=Hapmap2;RS=rs843490013;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	6364858	6364957	.	+	.	Name=Tassel_length;B73v2_pos=2:6155313;1allele=T/G;version=Hapmap2;RS=rs131293225;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	6386427	6386526	.	+	.	Name=Tassel_length;B73v2_pos=2:6169321;1allele=G/A;version=Hapmap2;RS=rs849346629;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	6397089	6397188	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:6179975;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6403140	6403239	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6186026;1allele=T/G;version=Hapmap1;RS=rs819066118;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	6405181	6405280	.	+	.	Name=Starch;B73v2_pos=2:6188067;1allele=GTC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6405527	6405626	.	+	.	Name=Starch;B73v2_pos=2:6188413;1allele=C/A;version=Hapmap2;RS=rs841420974;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	6538354	6538453	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6320727;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6554858	6554957	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6337232;1allele=T/A;version=Hapmap2;RS=rs276611648;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	6556211	6556310	.	+	.	Name=Starch;B73v2_pos=2:6338585;1allele=G/A;version=Hapmap2;RS=rs129006757;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	6580529	6580628	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:6362856;1allele=G/A;version=Hapmap2;RS=rs829414668;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	6583038	6583137	.	+	.	Name=Total_amino_acids;B73v2_pos=2:6365365;1allele=T/G;version=Hapmap1;RS=rs131293895;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	6688858	6688957	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:6469880;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6705078	6705177	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6453729;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6709537	6709636	.	+	.	Name=Malate;B73v2_pos=2:6449269;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	6782694	6782793	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6596791;1allele=/GGAA;version=Hapmap1;RS=rs812288175;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	6816282	6816381	.	+	.	Name=Leaf_width;B73v2_pos=2:6630517;1allele=A/C;version=Hapmap2;RS=rs831191793;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	6818351	6818450	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:6632586;1allele=A/C;version=Hapmap2;RS=rs1064664903;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	6920138	6920237	.	+	.	Name=Total_amino_acids;B73v2_pos=2:6737894;1allele=A/T;version=Hapmap2;RS=rs129007289;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	6922253	6922352	.	+	.	Name=Glucose;B73v2_pos=2:6740010;1allele=C/T;version=Hapmap2;RS=rs276612249;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	6948504	6948603	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:6766832;1allele=C/T;version=Hapmap2;RS=rs805692065;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	7040702	7040801	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:6857988;1allele=G/A;version=Hapmap2;RS=rs809705106;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	7044308	7044407	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:6861594;1allele=T/C;version=Hapmap2;RS=rs726522333;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	7044457	7044556	.	+	.	Name=Ear_height;B73v2_pos=2:6861743;1allele=T/C;version=Hapmap2;RS=rs823083960;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	7071833	7071932	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6889128;1allele=T/A;version=Hapmap2;RS=rs835841432;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	7083204	7083303	.	+	.	Name=Glucose;B73v2_pos=2:7047276;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7091503	7091602	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:7038977;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7115444	7115543	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7016532;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7115588	7115687	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7016388;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7115656	7115755	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7016320;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7144611	7144710	.	+	.	Name=Fructose;B73v2_pos=2:6987382;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7222726	7222825	.	+	.	Name=Glucose;B73v2_pos=2:6916953;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7224373	7224472	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:6915306;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7226623	7226722	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6913056;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7229312	7229411	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:6910367;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7229358	7229457	.	+	.	Name=Glucose;B73v2_pos=2:6910321;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7241037	7241136	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:6899463;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7343447	7343546	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:7172052;1allele=C/A;version=Hapmap2;RS=rs812607316;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	7345298	7345397	.	+	.	Name=Total_amino_acids;B73v2_pos=2:7173906;1allele=T/C;version=Hapmap2;RS=rs835392169;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	7347578	7347677	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:7176186;1allele=A/C;version=Hapmap2;RS=rs129008004;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	7348195	7348294	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:7176803;1allele=A/T;version=Hapmap2;RS=rs276613132;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	7352144	7352243	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7180748;1allele=G/A;version=Hapmap2;RS=rs726232975;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	7363507	7363606	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:7192110;1allele=T/C;version=Hapmap2;RS=rs1062983028;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	7364192	7364291	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:7192795;1allele=T/C;version=Hapmap1;RS=rs804945302;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	7375109	7375208	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7202652;1allele=G/A;version=Hapmap2;RS=rs129008095;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	7375466	7375565	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7203009;1allele=G/A;version=Hapmap2;RS=rs129008091;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	7400023	7400122	.	+	.	Name=Fructose;B73v2_pos=2:7154481;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7453467	7453566	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7216424;1allele=G/A;version=Hapmap2;RS=rs812640979;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	7455590	7455689	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:7218547;1allele=G/A;version=Hapmap1;RS=rs129008124;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	7458162	7458261	.	+	.	Name=Fructose;B73v2_pos=2:7221119;1allele=A/T;version=Hapmap2;RS=rs276613281;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	7458343	7458442	.	+	.	Name=Tassel_length;B73v2_pos=2:7221300;1allele=T/C;version=Hapmap1;RS=rs131295435;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	7465310	7465409	.	+	.	Name=Leaf_width;B73v2_pos=2:7228267;1allele=G/T;version=Hapmap2;RS=rs829010829;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	7487767	7487866	.	+	.	Name=Leaf_width;B73v2_pos=2:7250729;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7504637	7504736	.	+	.	Name=Tassel_length;B73v2_pos=2:7267686;1allele=C/T;version=Hapmap2;RS=rs129008183;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	7547376	7547475	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:7307216;1allele=A/G;version=Hapmap2;RS=rs848308959;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	7555151	7555250	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7314991;1allele=T/G;version=Hapmap2;RS=rs276613403;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	7555238	7555337	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7315078;1allele=T/C;version=Hapmap2;RS=rs827892710;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	7555785	7555884	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7315625;1allele=G/T;version=Hapmap2;RS=rs129008295;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	7556535	7556634	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:7316375;1allele=A/T;version=Hapmap2;RS=rs131295652;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	7809432	7809531	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:7523998;1allele=A/G;version=Hapmap2;RS=rs129008736;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	7809521	7809620	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:7524087;1allele=T/A;version=Hapmap2;RS=rs840771476;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	7813465	7813564	.	+	.	Name=Total_amino_acids;B73v2_pos=2:7528031;1allele=T/C;version=Hapmap2;RS=rs129008781;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	7918019	7918118	.	+	.	Name=Leaf_width;B73v2_pos=2:7662924;1allele=C/G;version=Hapmap1;RS=rs131295919;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	7918428	7918527	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7663333;1allele=T/C;version=Hapmap2;RS=rs129009059;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	7920871	7920970	.	+	.	Name=Tassel_length;B73v2_pos=2:7665776;1allele=CTT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	7996920	7997019	.	+	.	Name=Fructose;B73v2_pos=2:7744053;1allele=T/C;version=Hapmap2;RS=rs131296101;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	7997983	7998082	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:7745116;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	8399723	8399822	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7951145;1allele=A/G;version=Hapmap1;RS=rs131296323;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	8401642	8401741	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7953064;1allele=/CG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	8405847	8405946	.	+	.	Name=Leaf_width;B73v2_pos=2:7957269;1allele=C/T;version=Hapmap2;RS=rs845458835;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	8724798	8724897	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:8284157;1allele=C/T;version=Hapmap2;RS=rs838298188;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	8725227	8725326	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:8284586;1allele=A/T;version=Hapmap2;RS=rs838281380;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	8725680	8725779	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:8285039;1allele=G/A;version=Hapmap2;RS=rs814615464;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9161019	9161118	.	+	.	Name=Tassel_length;B73v2_pos=2:8715928;1allele=C/T;version=Hapmap1;RS=rs131296685;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	9163703	9163802	.	+	.	Name=Fructose;B73v2_pos=2:8718612;1allele=G/A;version=Hapmap2;RS=rs131296695;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	9227398	9227497	.	+	.	Name=Tassel_length;B73v2_pos=2:8781948;1allele=G/C;version=Hapmap2;RS=rs724706336;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	9251561	9251660	.	+	.	Name=Leaf_width;B73v2_pos=2:8815270;1allele=C/T;version=Hapmap2;RS=rs129010139;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	9338053	9338152	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:8900440;1allele=C/G;version=Hapmap2;RS=rs129010436;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	9338339	9338438	.	+	.	Name=Tassel_length;B73v2_pos=2:8900726;1allele=/CT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	9341380	9341479	.	+	.	Name=Leaf_width;B73v2_pos=2:8903767;1allele=T/C;version=Hapmap2;RS=rs129010425;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	9341495	9341594	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:8903882;1allele=A/G;version=Hapmap2;RS=rs848167880;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9345281	9345381	.	+	.	Name=Total_amino_acids;B73v2_pos=2:8907668;1allele=G/A;version=Hapmap2;RS=rs844087623;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	9351427	9351526	.	+	.	Name=Ear_height;B73v2_pos=2:8913813;1allele=A/C;version=Hapmap2;RS=rs810129579;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	9354969	9355068	.	+	.	Name=Leaf_width;B73v2_pos=2:8917355;1allele=A/T;version=Hapmap2;RS=rs276614554;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	9387478	9387577	.	+	.	Name=Leaf_width;B73v2_pos=2:8950342;1allele=G/C;version=Hapmap2;RS=rs276614610;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	9396133	9396232	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:8958997;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	9396532	9396631	.	+	.	Name=Glucose;B73v2_pos=2:8959396;1allele=A/C;version=Hapmap2;RS=rs839005244;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	9441774	9441873	.	+	.	Name=Tassel_length;B73v2_pos=2:9004632;1allele=C/T;version=Hapmap2;RS=rs809096563;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	9448337	9448436	.	+	.	Name=Glucose;B73v2_pos=2:9011195;1allele=G/A;version=Hapmap2;RS=rs839938767;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	9450689	9450788	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:9013547;1allele=G/C;version=Hapmap2;RS=rs276614729;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	9536976	9537075	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:9085071;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	9552559	9552658	.	+	.	Name=Ear_height;B73v2_pos=2:9100642;1allele=G/A;version=Hapmap1;RS=rs131297580;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	9552808	9552907	.	+	.	Name=Ear_height;B73v2_pos=2:9100891;1allele=C/G;version=Hapmap2;RS=rs131297593;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	9558335	9558434	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:9106418;1allele=T/C;version=Hapmap2;RS=rs276614854;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	9561500	9561599	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:9109583;1allele=C/T;version=Hapmap2;RS=rs842310521;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	9561657	9561756	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:9109740;1allele=C/T;version=Hapmap2;RS=rs850472906;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	9579813	9579912	.	+	.	Name=Total_amino_acids;B73v2_pos=2:9127898;1allele=T/G;version=Hapmap1;RS=rs835826350;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	9583845	9583944	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:9131930;1allele=G/A;version=Hapmap2;RS=rs131297712;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9585654	9585753	.	+	.	Name=Total_amino_acids;B73v2_pos=2:9133739;1allele=A/G;version=Hapmap1;RS=rs131297755;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9586119	9586218	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:9134204;1allele=C/A;version=Hapmap2;RS=rs847123459;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	9586704	9586803	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:9134789;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	9587995	9588094	.	+	.	Name=Leaf_width;B73v2_pos=2:9136080;1allele=T/G;version=Hapmap2;RS=rs802375113;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	9589078	9589177	.	+	.	Name=Tassel_length;B73v2_pos=2:9137117;1allele=T/C;version=Hapmap2;RS=rs1063878529;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	9589246	9589345	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:9137285;1allele=T/A;version=Hapmap2;RS=rs811809812;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	9639461	9639560	.	+	.	Name=Total_amino_acids;B73v2_pos=2:9194364;1allele=A/G;version=Hapmap2;RS=rs843478941;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9658872	9658971	.	+	.	Name=Stalk_strength;B73v2_pos=2:9214678;1allele=A/T;version=Hapmap2;RS=rs832847812;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	9693120	9693194	.	+	.	Name=Glucose;B73v2_pos=2:9267529;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	9695718	9695817	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:9270152;1allele=G/A;version=Hapmap2;RS=rs131297922;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	9699340	9699439	.	+	.	Name=Stalk_strength;B73v2_pos=2:9273774;1allele=T/C;version=Hapmap2;RS=rs848553476;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	9763585	9763684	.	+	.	Name=Ear_height;B73v2_pos=2:9318267;1allele=A/C;version=Hapmap1;RS=rs131297793;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	9804189	9804288	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:9354092;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	9808174	9808273	.	+	.	Name=Leaf_width;B73v2_pos=2:9358077;1allele=C/G;version=Hapmap2;RS=rs835305204;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	9809855	9809954	.	+	.	Name=Tassel_length;B73v2_pos=2:9359758;1allele=C/G;version=Hapmap2;RS=rs129011504;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	9813626	9813725	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:9363529;1allele=A/G;version=Hapmap2;RS=rs828992917;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9815138	9815237	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:9365041;1allele=G/A;version=Hapmap1;RS=rs131298321;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	9819280	9819379	.	+	.	Name=Starch;B73v2_pos=2:9369183;1allele=AA/;version=Hapmap1;RS=rs131298256;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	9819445	9819544	.	+	.	Name=Glucose;B73v2_pos=2:9369348;1allele=C/T;version=Hapmap1;RS=rs131298246;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	9821696	9821795	.	+	.	Name=Leaf_length;B73v2_pos=2:9371599;1allele=T/C;version=Hapmap2;RS=rs131298181;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	9821902	9822001	.	+	.	Name=Leaf_length;B73v2_pos=2:9371805;1allele=A/C;version=Hapmap1;RS=rs131298175;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	9850761	9850860	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:9412950;1allele=G/A;version=Hapmap2;RS=rs843900855;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	9864385	9864484	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:9428310;1allele=G/A;version=Hapmap2;RS=rs276615239;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9870719	9870818	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:9434644;1allele=C/T;version=Hapmap2;RS=rs129011652;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	9881398	9881497	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:9445323;1allele=G/C;version=Hapmap2;RS=rs725571916;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	9929483	9929582	.	+	.	Name=Ear_row_number;B73v2_pos=2:9497922;1allele=A/G;version=Hapmap2;RS=rs825762069;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9983891	9983990	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:9544639;1allele=G/T;version=Hapmap2;RS=rs129011892;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	9988803	9988902	.	+	.	Name=Cob_diameter;B73v2_pos=2:9549551;1allele=G/T;version=Hapmap2;RS=rs727462729;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	9990533	9990632	.	+	.	Name=Ear_height;B73v2_pos=2:9551281;1allele=T/G;version=Hapmap2;RS=rs846926759;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	9990704	9990803	.	+	.	Name=Ear_height;B73v2_pos=2:9551452;1allele=A/G;version=Hapmap2;RS=rs131298962;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	9990721	9990820	.	+	.	Name=Ear_height;B73v2_pos=2:9551469;1allele=G/T;version=Hapmap2;RS=rs131298963;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	9992737	9992836	.	+	.	Name=Cob_diameter;B73v2_pos=2:9553485;1allele=G/T;version=Hapmap1;RS=rs129011951;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	10035060	10035159	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:9587706;1allele=G/T;version=Hapmap2;RS=rs850363182;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	10049932	10050031	.	+	.	Name=Leaf_length;B73v2_pos=2:9602581;1allele=A/T;version=Hapmap2;RS=rs129012080;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10050376	10050475	.	+	.	Name=Cob_diameter;B73v2_pos=2:9603025;1allele=G/A;version=Hapmap2;RS=rs824020347;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	10093828	10093927	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:9646440;1allele=C/T;version=Hapmap2;RS=rs276615767;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10093868	10093967	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:9646480;1allele=G/T;version=Hapmap2;RS=rs837598002;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10105917	10106016	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:9658524;1allele=C/T;version=Hapmap2;RS=rs821277291;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	10374300	10374399	.	+	.	Name=Leaf_length;B73v2_pos=2:9924943;1allele=A/G;version=Hapmap2;RS=rs131299325;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10374720	10374819	.	+	.	Name=Ear_height;B73v2_pos=2:9925363;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	10375676	10375775	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:9926319;1allele=T/C;version=Hapmap2;RS=rs830122343;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10390886	10390985	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:9941529;1allele=C/T;version=Hapmap2;RS=rs129012462;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10393230	10393329	.	+	.	Name=Cob_diameter;B73v2_pos=2:9943873;1allele=G/A;version=Hapmap2;RS=rs276615893;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	10437286	10437385	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:9987929;1allele=C/T;version=Hapmap2;RS=rs129012710;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10581991	10582090	.	+	.	Name=Cob_diameter;B73v2_pos=2:10029579;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	10607176	10607275	.	+	.	Name=Starch;B73v2_pos=2:10211624;1allele=A/T;version=Hapmap1;RS=rs131299776;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	10607747	10607846	.	+	.	Name=Starch;B73v2_pos=2:10212195;1allele=G/T;version=Hapmap2;RS=rs829662907;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	10770934	10771033	.	+	.	Name=Leaf_length;B73v2_pos=2:10372072;1allele=G/A;version=Hapmap2;RS=rs129013080;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10771977	10772076	.	+	.	Name=Cob_diameter;B73v2_pos=2:10373113;1allele=C/A;version=Hapmap2;RS=rs131299868;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	10774218	10774317	.	+	.	Name=Cob_diameter;B73v2_pos=2:10375354;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	10774225	10774324	.	+	.	Name=Total_amino_acids;B73v2_pos=2:10375361;1allele=G/T;version=Hapmap2;RS=rs833233906;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	10781048	10781147	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:10382102;1allele=A/G;version=Hapmap2;RS=rs726398622;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10868342	10868441	.	+	.	Name=Ear_height;B73v2_pos=2:10474345;1allele=A/G;version=Hapmap2;RS=rs816123307;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10868537	10868636	.	+	.	Name=Ear_height;B73v2_pos=2:10474540;1allele=C/A;version=Hapmap1;RS=rs131300088;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	10880091	10880190	.	+	.	Name=Tassel_length;B73v2_pos=2:10486094;1allele=A/G;version=Hapmap2;RS=rs823822517;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10886371	10886470	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:10492374;1allele=T/C;version=Hapmap2;RS=rs818057002;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10886868	10886967	.	+	.	Name=Leaf_length;B73v2_pos=2:10492871;1allele=G/A;version=Hapmap2;RS=rs1064505657;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10888558	10888657	.	+	.	Name=Leaf_length;B73v2_pos=2:10494561;1allele=C/T;version=Hapmap2;RS=rs1064180378;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10892028	10892127	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:10498031;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	10892348	10892447	.	+	.	Name=Starch;B73v2_pos=2:10498351;1allele=C/A;version=Hapmap1;RS=rs131300291;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	10892961	10893060	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:10498964;1allele=C/G;version=Hapmap2;RS=rs808593080;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	10895325	10895424	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:10501328;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	10896181	10896280	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:10502184;1allele=G/C;version=Hapmap2;RS=rs129013305;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	10899948	10900047	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:10505951;1allele=T/C;version=Hapmap2;RS=rs816806314;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	10925303	10925402	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:10531300;1allele=T/C;version=Hapmap2;RS=rs129013415;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	10927306	10927405	.	+	.	Name=Leaf_length;B73v2_pos=2:10533303;1allele=A/G;version=Hapmap1;RS=rs834606521;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10927715	10927814	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:10533712;1allele=T/C;version=Hapmap2;RS=rs131300500;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10928417	10928516	.	+	.	Name=Leaf_length;B73v2_pos=2:10534414;1allele=C/T;version=Hapmap2;RS=rs830256023;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10928417	10928516	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:10534414;1allele=C/T;version=Hapmap2;RS=rs830256023;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10948747	10948846	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:10554958;1allele=C/G;version=Hapmap1;RS=rs129013625;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	10955158	10955257	.	+	.	Name=Cob_diameter;B73v2_pos=2:10561369;1allele=T/A;version=Hapmap2;RS=rs823373719;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	10956383	10956482	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:10562594;1allele=A/G;version=Hapmap2;RS=rs821867905;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10956478	10956577	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:10562689;1allele=C/T;version=Hapmap2;RS=rs813719128;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	10956482	10956581	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:10562693;1allele=G/C;version=Hapmap2;RS=rs813921303;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	10956624	10956723	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:10562835;1allele=A/G;version=Hapmap2;RS=rs839172641;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	10962735	10962834	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10568946;1allele=A/G;version=Hapmap2;RS=rs831471737;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	10965133	10965232	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:10571344;1allele=C/T;version=Hapmap2;RS=rs1060816498;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	10966619	10966718	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:10572830;1allele=C/T;version=Hapmap2;RS=rs276617277;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10987190	10987289	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10592074;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	10988275	10988374	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:10593159;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	10989212	10989311	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10594096;1allele=G/T;version=Hapmap2;RS=rs812184206;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	10989661	10989760	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10594545;1allele=C/T;version=Hapmap2;RS=rs805971713;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	10993064	10993163	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10597948;1allele=G/A;version=Hapmap2;RS=rs837919923;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11002047	11002146	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10606931;1allele=A/G;version=Hapmap2;RS=rs129013730;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	11002386	11002485	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10607270;1allele=T/C;version=Hapmap2;RS=rs276617518;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	11019880	11019979	.	+	.	Name=Tassel_length;B73v2_pos=2:10625140;1allele=T/A;version=Hapmap2;RS=rs131300879;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	11038376	11038475	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10646767;1allele=T/G;version=Hapmap1;RS=rs131300945;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	11038376	11038475	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:10646767;1allele=T/G;version=Hapmap1;RS=rs131300945;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	11039236	11039335	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10647627;1allele=T/A;version=Hapmap2;RS=rs839274356;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	11040457	11040556	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10648848;1allele=G/T;version=Hapmap2;RS=rs830295678;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	11040938	11041037	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:10649329;1allele=A/G;version=Hapmap2;RS=rs845297617;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11046248	11046347	.	+	.	Name=Ear_height;B73v2_pos=2:10654639;1allele=T/G;version=Hapmap2;RS=rs725131821;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	11046868	11046967	.	+	.	Name=Cob_diameter;B73v2_pos=2:10655259;1allele=G/A;version=Hapmap2;RS=rs131301024;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	11046907	11047006	.	+	.	Name=Cob_diameter;B73v2_pos=2:10655298;1allele=G/T;version=Hapmap2;RS=rs129013778;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	11049267	11049366	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:10657658;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11052574	11052673	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:10660965;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11053071	11053170	.	+	.	Name=Ear_height;B73v2_pos=2:10661462;1allele=C/A;version=Hapmap1;RS=rs810827082;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	11149800	11149899	.	+	.	Name=Leaf_width;B73v2_pos=2:10753411;1allele=G/A;version=Hapmap2;RS=rs832949195;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	11151756	11151855	.	+	.	Name=Leaf_width;B73v2_pos=2:10755367;1allele=G/A;version=Hapmap2;RS=rs276617677;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	11181976	11182075	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:10785590;1allele=C/T;version=Hapmap1;RS=rs131301278;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	11204386	11204485	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:10838709;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11238694	11238793	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:10872980;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11290770	11290869	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:10926153;1allele=C/T;version=Hapmap2;RS=rs1062527826;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	11353320	11353419	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11033151;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11391549	11391648	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11023718;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11393911	11394010	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11021356;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11394757	11394856	.	+	.	Name=Leaf_length;B73v2_pos=2:11020510;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11408138	11408237	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11049648;1allele=A/C;version=Hapmap2;RS=rs129014114;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	11408169	11408268	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11049679;1allele=G/A;version=Hapmap2;RS=rs276618192;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11409167	11409266	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11050677;1allele=A/G;version=Hapmap2;RS=rs811455539;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	11410110	11410209	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:11051620;1allele=T/A;version=Hapmap2;RS=rs129014119;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	11422943	11423042	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11057342;1allele=G/A;version=Hapmap2;RS=rs131301439;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11424136	11424235	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:11058535;1allele=G/A;version=Hapmap2;RS=rs276618250;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11424198	11424297	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:11058597;1allele=G/A;version=Hapmap2;RS=rs276618254;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	11464445	11464544	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11099304;1allele=T/C;version=Hapmap2;RS=rs276618332;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	11466631	11466730	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11101490;1allele=T/C;version=Hapmap2;RS=rs828811889;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	11499113	11499212	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11132542;1allele=C/T;version=Hapmap2;RS=rs276618441;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	11502045	11502144	.	+	.	Name=Cob_diameter;B73v2_pos=2:11135474;1allele=C/T;version=Hapmap2;RS=rs848423274;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	11505785	11505884	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:11139214;1allele=T/C;version=Hapmap2;RS=rs822928299;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	11518624	11518723	.	+	.	Name=Cob_diameter;B73v2_pos=2:11152053;1allele=A/G;version=Hapmap2;RS=rs842302764;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11562913	11563012	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11196757;1allele=G/T;version=Hapmap2;RS=rs276618558;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	11566738	11566837	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11200582;1allele=T/G;version=Hapmap2;RS=rs837113665;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	11569363	11569462	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:11203207;1allele=A/G;version=Hapmap2;RS=rs805268031;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11570165	11570264	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:11204009;1allele=A/G;version=Hapmap1;RS=rs131301567;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11571204	11571303	.	+	.	Name=Leaf_length;B73v2_pos=2:11205045;1allele=C/T;version=Hapmap2;RS=rs131301571;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	11571204	11571303	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11205045;1allele=T/C;version=Hapmap1;RS=rs131301571;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	11572489	11572588	.	+	.	Name=Cob_diameter;B73v2_pos=2:11206330;1allele=C/A;version=Hapmap2;RS=rs815240362;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	11573772	11573871	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:11207613;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11762840	11762939	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11278937;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11763774	11763873	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11278002;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11798831	11798930	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:11297814;1allele=A/G;version=Hapmap2;RS=rs276618731;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	11800658	11800757	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11299641;1allele=A/G;version=Hapmap1;RS=rs129014462;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	11868497	11868596	.	+	.	Name=Leaf_length;B73v2_pos=2:11352510;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11869334	11869433	.	+	.	Name=Leaf_length;B73v2_pos=2:11353347;1allele=C/T;version=Hapmap2;RS=rs276618883;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	11871664	11871763	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:11355679;1allele=C/T;version=Hapmap2;RS=rs833318560;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	11884456	11884555	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11368481;1allele=C/T;version=Hapmap2;RS=rs276618969;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	11892920	11893018	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11376950;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	11913416	11913515	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11397448;1allele=G/T;version=Hapmap1;RS=rs131301897;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	11915911	11916010	.	+	.	Name=Days_to_silk;B73v2_pos=2:11399943;1allele=A/G;version=Hapmap2;RS=rs843880522;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	11926445	11926544	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11408726;1allele=G/A;version=Hapmap2;RS=rs129014929;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12031836	12031935	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11515513;1allele=C/G;version=Hapmap2;RS=rs276619470;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	12032968	12033067	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11516645;1allele=C/T;version=Hapmap2;RS=rs276619490;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12063717	12063816	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:11546639;1allele=T/C;version=Hapmap1;RS=rs131302007;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12065696	12065795	.	+	.	Name=Leaf_length;B73v2_pos=2:11548572;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12074603	12074702	.	+	.	Name=Cob_diameter;B73v2_pos=2:11557480;1allele=G/A;version=Hapmap2;RS=rs276619554;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	12088588	12088687	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:11564676;1allele=G/C;version=Hapmap2;RS=rs827028916;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	12088608	12088707	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11564696;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12103182	12103281	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11579271;1allele=C/G;version=Hapmap2;RS=rs129015154;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	12103307	12103406	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11579396;1allele=C/A;version=Hapmap2;RS=rs845552594;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	12103328	12103427	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11579417;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12118327	12118426	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:11594416;1allele=A/G;version=Hapmap2;RS=rs806719988;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12118365	12118464	.	+	.	Name=Tassel_length;B73v2_pos=2:11594454;1allele=G/A;version=Hapmap2;RS=rs804992075;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	12118426	12118525	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:11594515;1allele=T/G;version=Hapmap2;RS=rs846572455;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	12129961	12130060	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11606050;1allele=C/T;version=Hapmap2;RS=rs1062205358;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12142862	12142961	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11618950;1allele=A/G;version=Hapmap2;RS=rs276619675;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12158755	12158854	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11623565;1allele=G/A;version=Hapmap2;RS=rs827204404;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	12158773	12158872	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11623583;1allele=C/G;version=Hapmap2;RS=rs809854469;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	12158855	12158954	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11623665;1allele=A/C;version=Hapmap2;RS=rs131302316;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	12214484	12214583	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:11678373;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12214492	12214591	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:11678381;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12215819	12215918	.	+	.	Name=Tassel_length;B73v2_pos=2:11679708;1allele=C/A;version=Hapmap1;RS=rs724619793;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	12219016	12219115	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11682905;1allele=T/C;version=Hapmap1;RS=rs131302697;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12235965	12236064	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11723045;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12247092	12247191	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:11733249;1allele=A/G;version=Hapmap2;RS=rs835553175;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12247094	12247193	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:11733251;1allele=T/C;version=Hapmap2;RS=rs849897830;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12265823	12265922	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11751980;1allele=A/G;version=Hapmap1;RS=rs129015608;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	12266480	12266579	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11752637;1allele=C/T;version=Hapmap2;RS=rs129015605;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12267024	12267123	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11753181;1allele=TC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12270800	12270899	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:11756957;1allele=+/-;version=Hapmap2;RS=rs847788415;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	12271874	12271973	.	+	.	Name=Ear_row_number;B73v2_pos=2:11757943;1allele=A/C;version=Hapmap2;RS=rs832355371;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	12273381	12273480	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:11759450;1allele=C/T;version=Hapmap2;RS=rs129015569;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12275729	12275828	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11761798;1allele=A/G;version=Hapmap2;RS=rs276619901;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	12337235	12337334	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11823827;1allele=A/G;version=Hapmap1;RS=rs131303001;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12337380	12337479	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11823972;1allele=G/A;version=Hapmap2;RS=rs276619997;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	12341383	12341482	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11827975;1allele=T/C;version=Hapmap2;RS=rs276620030;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12343349	12343448	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11829941;1allele=A/G;version=Hapmap1;RS=rs131303134;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	12347463	12347562	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:11834055;1allele=A/C;version=Hapmap2;RS=rs1063931575;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	12350305	12350404	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:11836897;1allele=T/C;version=Hapmap2;RS=rs820515931;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12445122	12445221	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11932898;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12460674	12460773	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:11948450;1allele=C/-;version=Hapmap1;RS=rs131303259;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	12461452	12461551	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:11949228;1allele=A/G;version=Hapmap2;RS=rs131303261;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12461838	12461937	.	+	.	Name=Ear_height;B73v2_pos=2:11949614;1allele=C/G;version=Hapmap2;RS=rs131303287;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	12462021	12462120	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:11949797;1allele=C/T;version=Hapmap2;RS=rs129015952;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12464017	12464116	.	+	.	Name=Days_to_silk;B73v2_pos=2:11951789;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12464164	12464263	.	+	.	Name=Days_to_silk;B73v2_pos=2:11951936;1allele=C/G;version=Hapmap1;RS=rs131303326;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12524040	12524139	.	+	.	Name=Leaf_width;B73v2_pos=2:12011816;1allele=A/G;version=Hapmap2;RS=rs807118467;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12526556	12526655	.	+	.	Name=Leaf_width;B73v2_pos=2:12014332;1allele=A/G;version=Hapmap2;RS=rs129016187;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12527986	12528085	.	+	.	Name=Leaf_width;B73v2_pos=2:12015762;1allele=T/C;version=Hapmap2;RS=rs849861347;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12538807	12538906	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12026581;1allele=A/G;version=Hapmap1;RS=rs129016225;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	12609426	12609525	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12097212;1allele=G/C;version=Hapmap2;RS=rs801707586;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	12610808	12610907	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12098594;1allele=T/C;version=Hapmap2;RS=rs129016375;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12613876	12613975	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12101662;1allele=A/G;version=Hapmap2;RS=rs129016409;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	12616109	12616208	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12103895;1allele=C/T;version=Hapmap2;RS=rs129016444;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12616249	12616348	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12104035;1allele=G/A;version=Hapmap2;RS=rs129016446;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	12616647	12616746	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12104433;1allele=T/G;version=Hapmap2;RS=rs131178080;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	12618172	12618271	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12105958;1allele=G/A;version=Hapmap2;RS=rs826402971;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12619635	12619734	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12112194;1allele=G/A;version=Hapmap2;RS=rs131303731;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	12629312	12629411	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12129423;1allele=C/G;version=Hapmap1;RS=rs131303736;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12636384	12636483	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12136495;1allele=G/A;version=Hapmap2;RS=rs131303753;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12637547	12637646	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12137658;1allele=T/C;version=Hapmap1;RS=rs129016515;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12637816	12637915	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12137927;1allele=A/G;version=Hapmap2;RS=rs131303775;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	12637857	12637956	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12137968;1allele=G/T;version=Hapmap2;RS=rs276620738;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	12659224	12659323	.	+	.	Name=Tassel_length;B73v2_pos=2:12154567;1allele=G/T;version=Hapmap2;RS=rs842302454;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	12698028	12698127	.	+	.	Name=Cob_diameter;B73v2_pos=2:12193048;1allele=G/T;version=Hapmap2;RS=rs131303796;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	12705595	12705694	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12200615;1allele=AT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12705702	12705801	.	+	.	Name=Ear_height;B73v2_pos=2:12200722;1allele=G/C;version=Hapmap2;RS=rs833214246;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	12733090	12733189	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:12228325;1allele=T/C;version=Hapmap2;RS=rs129016647;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12744775	12744874	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:12240346;1allele=T/A;version=Hapmap2;RS=rs825597209;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	12745475	12745574	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:12241046;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12746918	12747017	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:12242489;1allele=A/G;version=Hapmap1;RS=rs131303976;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12746999	12747098	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:12242570;1allele=C/G;version=Hapmap1;RS=rs129016612;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	12746999	12747098	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:12242570;1allele=C/G;version=Hapmap1;RS=rs129016612;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	12749414	12749513	.	+	.	Name=Days_to_silk;B73v2_pos=2:12244985;1allele=A/T;version=Hapmap2;RS=rs129016603;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	12761156	12761255	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12254569;1allele=/GTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	12761342	12761441	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12254755;1allele=A/G;version=Hapmap1;RS=rs846640120;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	12762329	12762428	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:12255742;1allele=C/G;version=Hapmap2;RS=rs131304146;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12785489	12785588	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:12278904;1allele=T/C;version=Hapmap2;RS=rs848196853;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	12805664	12805763	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:12299033;1allele=C/G;version=Hapmap1;RS=rs131304278;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12846449	12846548	.	+	.	Name=Total_amino_acids;B73v2_pos=2:12338135;1allele=C/T;version=Hapmap2;RS=rs824604381;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12878893	12878992	.	+	.	Name=Ear_height;B73v2_pos=2:12370581;1allele=C/T;version=Hapmap2;RS=rs825702116;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12878893	12878992	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:12370581;1allele=C/T;version=Hapmap2;RS=rs825702116;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	12963990	12964089	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:12447845;1allele=T/G;version=Hapmap2;RS=rs849736651;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	12966276	12966375	.	+	.	Name=Tassel_length;B73v2_pos=2:12450131;1allele=T/G;version=Hapmap2;RS=rs825327609;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	13123724	13123823	.	+	.	Name=Total_amino_acids;B73v2_pos=2:12602492;1allele=C/G;version=Hapmap2;RS=rs276621357;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	13162937	13163036	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:12643220;1allele=T/C;version=Hapmap2;RS=rs833370546;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	13191885	13191984	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:12670067;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13199975	13200074	.	+	.	Name=Tassel_length;B73v2_pos=2:12678159;1allele=G/A;version=Hapmap2;RS=rs129017312;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13203496	13203595	.	+	.	Name=Total_amino_acids;B73v2_pos=2:12681680;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13204555	13204654	.	+	.	Name=Days_to_silk;B73v2_pos=2:12682739;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13205333	13205432	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:12683517;1allele=C/T;version=Hapmap2;RS=rs129017339;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	13205333	13205432	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:12683517;1allele=C/T;version=Hapmap2;RS=rs129017339;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	13307755	13307854	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:12791348;1allele=A/G;version=Hapmap2;RS=rs813647331;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	13313279	13313378	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:12796872;1allele=C/G;version=Hapmap2;RS=rs837316841;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13319396	13319495	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:12802989;1allele=C/T;version=Hapmap2;RS=rs131304948;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	13321229	13321328	.	+	.	Name=Cob_diameter;B73v2_pos=2:12804810;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13322859	13322958	.	+	.	Name=Leaf_width;B73v2_pos=2:12806440;1allele=A/G;version=Hapmap2;RS=rs812195375;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	13323370	13323469	.	+	.	Name=Cob_diameter;B73v2_pos=2:12806952;1allele=/CGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13328118	13328217	.	+	.	Name=Leaf_width;B73v2_pos=2:12811700;1allele=A/C;version=Hapmap1;RS=rs131305001;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	13395254	13395353	.	+	.	Name=Cob_diameter;B73v2_pos=2:12847527;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13395277	13395376	.	+	.	Name=Cob_diameter;B73v2_pos=2:12847504;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13436729	13436828	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:12899890;1allele=A/T;version=Hapmap2;RS=rs847529969;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	13472035	13472134	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:12935196;1allele=G/A;version=Hapmap2;RS=rs809233236;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13514786	13514885	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:12974904;1allele=C/T;version=Hapmap2;RS=rs849360754;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	13529443	13529542	.	+	.	Name=Cob_diameter;B73v2_pos=2:12990048;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13542160	13542259	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:13002766;1allele=G/A;version=Hapmap2;RS=rs129017812;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13542181	13542280	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:13002787;1allele=G/A;version=Hapmap2;RS=rs129017814;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13545693	13545792	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:13006299;1allele=C/G;version=Hapmap1;RS=rs129017823;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	13550865	13550964	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:13011471;1allele=T/C;version=Hapmap1;RS=rs276622043;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	13564849	13564948	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:13025455;1allele=C/T;version=Hapmap2;RS=rs129017854;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	13566918	13567017	.	+	.	Name=Ear_row_number;B73v2_pos=2:13027524;1allele=G/A;version=Hapmap2;RS=rs802974531;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13638733	13638832	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:13099271;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13693245	13693344	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13154045;1allele=G/A;version=Hapmap2;RS=rs847280623;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13820824	13820923	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13282211;1allele=G/A;version=Hapmap2;RS=rs276622302;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	13821630	13821729	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13283017;1allele=C/T;version=Hapmap2;RS=rs826262143;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	13821835	13821934	.	+	.	Name=Days_to_silk;B73v2_pos=2:13283222;1allele=A/G;version=Hapmap2;RS=rs276622317;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	13822301	13822400	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13283688;1allele=C/G;version=Hapmap2;RS=rs276622322;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	13823311	13823410	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13284698;1allele=G/T;version=Hapmap2;RS=rs276622329;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	13831774	13831873	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13292181;1allele=C/G;version=Hapmap1;RS=rs131305490;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	13833202	13833301	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13293609;1allele=T/C;version=Hapmap2;RS=rs842557080;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	13837088	13837187	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13297495;1allele=C/T;version=Hapmap2;RS=rs823150473;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	13837113	13837212	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13297520;1allele=T/G;version=Hapmap2;RS=rs129018354;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	13840268	13840367	.	+	.	Name=Days_to_silk;B73v2_pos=2:13300675;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13848752	13848851	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:13309159;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13848752	13848851	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:13309159;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13854894	13854993	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13315302;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13854908	13855007	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13315316;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13882517	13882616	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13341287;1allele=G/A;version=Hapmap2;RS=rs818608975;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	13885317	13885416	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13344087;1allele=T/C;version=Hapmap1;RS=rs131305748;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	13893303	13893402	.	+	.	Name=Stalk_strength;B73v2_pos=2:13352073;1allele=C/A;version=Hapmap1;RS=rs131305790;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	13922605	13922704	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13381302;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13931780	13931879	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13390477;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13933040	13933139	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:13391737;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13939123	13939222	.	+	.	Name=Stalk_strength;B73v2_pos=2:13397820;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	13942571	13942670	.	+	.	Name=Cob_diameter;B73v2_pos=2:13401742;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	14006129	14006228	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13453975;1allele=G/T;version=Hapmap2;RS=rs805478198;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	14006934	14007033	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13454780;1allele=A/C;version=Hapmap2;RS=rs826049993;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	14006999	14007098	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13454845;1allele=C/T;version=Hapmap2;RS=rs830170759;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	14072282	14072381	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:13520127;1allele=A/T;version=Hapmap2;RS=rs276622793;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	14073823	14073922	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13521668;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	14073823	14073922	.	+	.	Name=Days_to_silk;B73v2_pos=2:13521668;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	14074121	14074220	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13521966;1allele=T/G;version=Hapmap2;RS=rs802084398;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	14080255	14080354	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13528100;1allele=C/G;version=Hapmap1;RS=rs849930926;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	14095066	14095165	.	+	.	Name=Cob_diameter;B73v2_pos=2:13543051;1allele=C/A;version=Hapmap1;RS=rs131306063;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	14097653	14097752	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:13545638;1allele=G/T;version=Hapmap2;RS=rs822273566;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	14142055	14142154	.	+	.	Name=Tassel_length;B73v2_pos=2:13590030;1allele=C/G;version=Hapmap2;RS=rs821206924;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	14142185	14142284	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13590160;1allele=G/A;version=Hapmap2;RS=rs276622865;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	14143080	14143179	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:13591055;1allele=G/A;version=Hapmap2;RS=rs839795493;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	14143126	14143225	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:13591101;1allele=G/C;version=Hapmap2;RS=rs725475600;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	14143922	14144021	.	+	.	Name=Ear_height;B73v2_pos=2:13591897;1allele=A/G;version=Hapmap2;RS=rs807337038;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	14144876	14144975	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:13592851;1allele=G/A;version=Hapmap2;RS=rs816100312;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	14145676	14145775	.	+	.	Name=Ear_height;B73v2_pos=2:13593648;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	14145691	14145790	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:13593663;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	14168941	14169040	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:13616916;1allele=G/A;version=Hapmap1;RS=rs131306343;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	14188551	14188650	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:13636396;1allele=G/A;version=Hapmap2;RS=rs805526294;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	14262084	14262183	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:13711690;1allele=A/T;version=Hapmap2;RS=rs817827473;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14263433	14263532	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:13713039;1allele=G/T;version=Hapmap2;RS=rs129019353;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	14299536	14299635	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13747846;1allele=C/T;version=Hapmap2;RS=rs830253293;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14336930	14337029	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13785781;1allele=G/C;version=Hapmap1;RS=rs131306753;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	14337692	14337791	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:13786543;1allele=A/C;version=Hapmap2;RS=rs827060961;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	14350383	14350482	.	+	.	Name=Ear_height;B73v2_pos=2:13799234;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	14378585	14378684	.	+	.	Name=Ear_height;B73v2_pos=2:13827192;1allele=A/G;version=Hapmap2;RS=rs845692289;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	14379046	14379145	.	+	.	Name=Ear_height;B73v2_pos=2:13827653;1allele=A/G;version=Hapmap2;RS=rs131306807;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	14379046	14379145	.	+	.	Name=Cob_diameter;B73v2_pos=2:13827653;1allele=A/G;version=Hapmap2;RS=rs131306807;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	14379046	14379145	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:13827653;1allele=A/G;version=Hapmap2;RS=rs131306807;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	14381280	14381379	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:13829887;1allele=G/T;version=Hapmap2;RS=rs1063902816;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	14384238	14384337	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:13832845;1allele=C/T;version=Hapmap2;RS=rs276623397;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	14389302	14389401	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:13837909;1allele=T/A;version=Hapmap2;RS=rs849074134;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	14402390	14402489	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:13850997;1allele=T/A;version=Hapmap2;RS=rs276623481;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	14404993	14405092	.	+	.	Name=Cob_diameter;B73v2_pos=2:13853600;1allele=C/T;version=Hapmap2;RS=rs811277703;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	14405016	14405115	.	+	.	Name=Cob_diameter;B73v2_pos=2:13853623;1allele=G/T;version=Hapmap2;RS=rs812603149;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	14405016	14405115	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:13853623;1allele=G/T;version=Hapmap2;RS=rs812603149;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	14408625	14408724	.	+	.	Name=Days_to_silk;B73v2_pos=2:13857232;1allele=C/T;version=Hapmap2;RS=rs825785637;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14408625	14408724	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:13857232;1allele=C/T;version=Hapmap2;RS=rs825785637;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14415789	14415888	.	+	.	Name=Tassel_length;B73v2_pos=2:13864396;1allele=A/C;version=Hapmap1;RS=rs131306873;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	14416565	14416664	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:13865172;1allele=G/A;version=Hapmap2;RS=rs849813842;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	14421111	14421210	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13869570;1allele=C/A;version=Hapmap2;RS=rs129019621;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	14421231	14421330	.	+	.	Name=Total_amino_acids;B73v2_pos=2:13869690;1allele=T/C;version=Hapmap2;RS=rs803456761;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14765264	14765363	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14106478;1allele=T/A;version=Hapmap2;RS=rs1061092686;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	14766443	14766542	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:14107654;1allele=C/T;version=Hapmap1;RS=rs129020239;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	14770236	14770335	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14111447;1allele=T/C;version=Hapmap2;RS=rs131307051;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14906399	14906498	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14203258;1allele=G/T;version=Hapmap2;RS=rs821136572;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	14908156	14908255	.	+	.	Name=Protein;B73v2_pos=2:14205015;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	14910238	14910337	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:14207097;1allele=G/C;version=Hapmap1;RS=rs131307114;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	14911075	14911174	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:14207934;1allele=T/C;version=Hapmap1;RS=rs131307129;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14920733	14920832	.	+	.	Name=Cob_diameter;B73v2_pos=2:14217592;1allele=T/C;version=Hapmap2;RS=rs131307154;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	14928243	14928342	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:14225093;1allele=T/C;version=Hapmap2;RS=rs824632330;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	14929837	14929936	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:14226687;1allele=A/C;version=Hapmap1;RS=rs131307355;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	14971763	14971862	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:14265824;1allele=T/A;version=Hapmap2;RS=rs129020465;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	14974653	14974752	.	+	.	Name=Total_amino_acids;B73v2_pos=2:14268710;1allele=C/G;version=Hapmap1;RS=rs131307592;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	15034081	15034180	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:14327857;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	15041978	15042077	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:14335754;1allele=C/A;version=Hapmap1;RS=rs129020573;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	15043452	15043551	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:14337228;1allele=T/C;version=Hapmap2;RS=rs129020599;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	15047222	15047321	.	+	.	Name=Ear_row_number;B73v2_pos=2:14340998;1allele=C/T;version=Hapmap2;RS=rs847210108;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15057028	15057127	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:14350612;1allele=A/G;version=Hapmap2;RS=rs129020632;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15057450	15057549	.	+	.	Name=Protein;B73v2_pos=2:14351034;1allele=T/C;version=Hapmap2;RS=rs818123869;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	15089207	15089306	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:14382795;1allele=A/C;version=Hapmap2;RS=rs809652493;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	15101089	15101188	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:14394677;1allele=G/T;version=Hapmap2;RS=rs129020727;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	15107429	15107528	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14401017;1allele=A/G;version=Hapmap1;RS=rs131307770;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15164307	15164406	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14459353;1allele=C/T;version=Hapmap2;RS=rs847306761;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15165432	15165531	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14460478;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	15165443	15165542	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14460489;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	15166020	15166119	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14461066;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	15169787	15169886	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:14464833;1allele=G/T;version=Hapmap2;RS=rs276624413;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	15172664	15172763	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14467710;1allele=T/C;version=Hapmap2;RS=rs724314108;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15173969	15174068	.	+	.	Name=Days_to_silk;B73v2_pos=2:14469015;1allele=C/A;version=Hapmap2;RS=rs131307957;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	15173969	15174068	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:14469015;1allele=C/A;version=Hapmap2;RS=rs131307957;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	15229754	15229853	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14525533;1allele=C/T;version=Hapmap2;RS=rs129020971;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	15230720	15230819	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:14526499;1allele=C/G;version=Hapmap2;RS=rs809018425;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	15232013	15232112	.	+	.	Name=Days_to_silk;B73v2_pos=2:14527792;1allele=T/G;version=Hapmap2;RS=rs129020986;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	15235946	15236045	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:14531725;1allele=G/A;version=Hapmap2;RS=rs725431051;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	15241519	15241618	.	+	.	Name=Ear_height;B73v2_pos=2:14537297;1allele=G/A;version=Hapmap2;RS=rs726355832;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	15251196	15251295	.	+	.	Name=Ear_row_number;B73v2_pos=2:14546974;1allele=C/T;version=Hapmap1;RS=rs129021162;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15251873	15251972	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:14547651;1allele=C/A;version=Hapmap1;RS=rs131308136;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15309077	15309176	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:14613551;1allele=T/C;version=Hapmap2;RS=rs802782325;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	15312763	15312862	.	+	.	Name=Total_amino_acids;B73v2_pos=2:14617237;1allele=A/G;version=Hapmap2;RS=rs817892027;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15313317	15313416	.	+	.	Name=Total_amino_acids;B73v2_pos=2:14617791;1allele=+/-;version=Hapmap2;RS=rs824648644;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	15315526	15315625	.	+	.	Name=Total_amino_acids;B73v2_pos=2:14620000;1allele=A/G;version=Hapmap2;RS=rs822024875;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15333384	15333483	.	+	.	Name=Cob_diameter;B73v2_pos=2:14672957;1allele=G/A;version=Hapmap2;RS=rs811105596;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	15335437	15335536	.	+	.	Name=Days_to_silk;B73v2_pos=2:14675010;1allele=A/G;version=Hapmap1;RS=rs131308311;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15335437	15335536	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:14675010;1allele=A/G;version=Hapmap1;RS=rs131308311;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15335974	15336073	.	+	.	Name=Protein;B73v2_pos=2:14675547;1allele=G/C;version=Hapmap2;RS=rs843529291;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	15337976	15338075	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14677549;1allele=A/G;version=Hapmap1;RS=rs129021251;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15338421	15338520	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14677994;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	15352343	15352442	.	+	.	Name=Total_amino_acids;B73v2_pos=2:14691321;1allele=C/T;version=Hapmap2;RS=rs828315196;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15377299	15377398	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14716191;1allele=C/T;version=Hapmap2;RS=rs131308408;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15379936	15380035	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:14718828;1allele=G/C;version=Hapmap1;RS=rs129021362;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	15380036	15380135	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:14718928;1allele=T/A;version=Hapmap2;RS=rs129021363;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	15426788	15426887	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14730860;1allele=C/G;version=Hapmap2;RS=rs822640261;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	15429742	15429841	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14733814;1allele=A/C;version=Hapmap1;RS=rs817471065;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15429744	15429843	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14733816;1allele=C/T;version=Hapmap1;RS=rs1063436015;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15454142	15454241	.	+	.	Name=Cob_diameter;B73v2_pos=2:14797044;1allele=T/C;version=Hapmap2;RS=rs812133167;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	15454868	15454967	.	+	.	Name=Cob_diameter;B73v2_pos=2:14797770;1allele=T/C;version=Hapmap2;RS=rs129021425;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	15456788	15456887	.	+	.	Name=Leaf_length;B73v2_pos=2:14799690;1allele=C/T;version=Hapmap1;RS=rs803818215;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15509227	15509326	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14822355;1allele=G/C;version=Hapmap2;RS=rs810847058;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	15541745	15541844	.	+	.	Name=Leaf_length;B73v2_pos=2:14880961;1allele=T/G;version=Hapmap2;RS=rs1060609177;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	15554030	15554129	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14893246;1allele=C/T;version=Hapmap1;RS=rs131308782;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15554361	15554460	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14893577;1allele=G/C;version=Hapmap2;RS=rs131308795;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	15556693	15556792	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:14895909;1allele=T/A;version=Hapmap2;RS=rs828284042;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	15558477	15558576	.	+	.	Name=Cob_diameter;B73v2_pos=2:14897693;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	15600427	15600526	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14939626;1allele=C/T;version=Hapmap2;RS=rs806519634;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15633929	15634028	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14972713;1allele=T/C;version=Hapmap2;RS=rs823009873;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	15655067	15655166	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:14993616;1allele=A/C;version=Hapmap2;RS=rs810006281;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	15667158	15667257	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:15005648;1allele=A/G;version=Hapmap2;RS=rs276624989;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	15670966	15671065	.	+	.	Name=Cob_diameter;B73v2_pos=2:15009456;1allele=G/T;version=Hapmap2;RS=rs801601104;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	15671228	15671327	.	+	.	Name=Cob_diameter;B73v2_pos=2:15009718;1allele=G/A;version=Hapmap2;RS=rs841794288;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	15681584	15681683	.	+	.	Name=Leaf_length;B73v2_pos=2:15020074;1allele=C/T;version=Hapmap2;RS=rs131308999;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15687188	15687287	.	+	.	Name=Sucrose;B73v2_pos=2:15025678;1allele=A/T;version=Hapmap2;RS=rs806537425;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	15749240	15749339	.	+	.	Name=Leaf_length;B73v2_pos=2:15102971;1allele=C/T;version=Hapmap2;RS=rs847379840;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15750661	15750760	.	+	.	Name=Cob_diameter;B73v2_pos=2:15104392;1allele=A/G;version=Hapmap2;RS=rs724504104;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15761087	15761186	.	+	.	Name=Leaf_length;B73v2_pos=2:15114818;1allele=A/C;version=Hapmap2;RS=rs726469231;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	15769337	15769436	.	+	.	Name=Cob_diameter;B73v2_pos=2:15123068;1allele=G/A;version=Hapmap2;RS=rs816033896;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	15779652	15779751	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:15133383;1allele=G/C;version=Hapmap2;RS=rs823728779;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	15872643	15872742	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:15240263;1allele=T/C;version=Hapmap2;RS=rs809879129;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15873380	15873479	.	+	.	Name=Sucrose;B73v2_pos=2:15241000;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	15873626	15873725	.	+	.	Name=Sucrose;B73v2_pos=2:15241246;1allele=C/T;version=Hapmap2;RS=rs834508592;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15876057	15876156	.	+	.	Name=Cob_diameter;B73v2_pos=2:15243677;1allele=C/T;version=Hapmap2;RS=rs131309312;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15877861	15877960	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:15245481;1allele=C/T;version=Hapmap1;RS=rs131309322;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15881429	15881528	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:15249049;1allele=C/T;version=Hapmap2;RS=rs836902336;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	15896133	15896232	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:15263754;1allele=A/G;version=Hapmap2;RS=rs131309338;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	15912447	15912546	.	+	.	Name=Leaf_length;B73v2_pos=2:15280069;1allele=T/A;version=Hapmap2;RS=rs817752000;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	16043883	16043982	.	+	.	Name=Cob_diameter;B73v2_pos=2:15375529;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16112258	16112357	.	+	.	Name=Cob_diameter;B73v2_pos=2:15476587;1allele=C/G;version=Hapmap2;RS=rs849950555;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	16117672	16117771	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:15482000;1allele=/CGCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16172589	16172687	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:15537852;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16188452	16188551	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:15553882;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16206596	16206695	.	+	.	Name=Starch;B73v2_pos=2:15572026;1allele=T/A;version=Hapmap2;RS=rs276625535;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	16215905	16216004	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:15581335;1allele=G/A;version=Hapmap2;RS=rs817367643;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16317867	16317966	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:15683478;1allele=T/A;version=Hapmap2;RS=rs129022275;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	16334057	16334156	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:15704721;1allele=C/T;version=Hapmap2;RS=rs276625922;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	16495571	16495670	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:15867345;1allele=G/A;version=Hapmap2;RS=rs827168356;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16527079	16527178	.	+	.	Name=Cob_diameter;B73v2_pos=2:15898850;1allele=T/A;version=Hapmap2;RS=rs845014499;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	16527552	16527651	.	+	.	Name=Cob_diameter;B73v2_pos=2:15899323;1allele=A/C;version=Hapmap2;RS=rs276626199;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	16542190	16542289	.	+	.	Name=Days_to_silk;B73v2_pos=2:15913945;1allele=T/C;version=Hapmap2;RS=rs276626301;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	16543337	16543436	.	+	.	Name=Cob_diameter;B73v2_pos=2:15915092;1allele=C/T;version=Hapmap2;RS=rs814532377;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	16559098	16559197	.	+	.	Name=Leaf_length;B73v2_pos=2:15930409;1allele=A/G;version=Hapmap2;RS=rs276626338;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16562624	16562723	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:15933935;1allele=A/T;version=Hapmap2;RS=rs812025528;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	16597495	16597594	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:15968830;1allele=G/A;version=Hapmap2;RS=rs276626358;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16601042	16601141	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:15972377;1allele=G/T;version=Hapmap2;RS=rs129022387;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	16602436	16602535	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:15973771;1allele=T/C;version=Hapmap1;RS=rs131310285;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16605452	16605551	.	+	.	Name=Cob_diameter;B73v2_pos=2:15976787;1allele=G/A;version=Hapmap2;RS=rs276626442;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16612260	16612359	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:15983595;1allele=A/G;version=Hapmap2;RS=rs838113227;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16612987	16613086	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:15984322;1allele=T/C;version=Hapmap2;RS=rs823545466;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16613010	16613109	.	+	.	Name=Leaf_length;B73v2_pos=2:15984345;1allele=T/G;version=Hapmap2;RS=rs809385087;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	16613243	16613342	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:15984578;1allele=T/C;version=Hapmap1;RS=rs131310425;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16615570	16615669	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:15986905;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16616858	16616957	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:15988193;1allele=A/G;version=Hapmap2;RS=rs846637107;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16616858	16616957	.	+	.	Name=Ear_height;B73v2_pos=2:15988193;1allele=A/G;version=Hapmap2;RS=rs846637107;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16617863	16617962	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:15989198;1allele=G/T;version=Hapmap2;RS=rs726456043;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	16618193	16618292	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:15989528;1allele=G/A;version=Hapmap2;RS=rs836879886;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	16619156	16619255	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:15990491;1allele=T/G;version=Hapmap2;RS=rs131310453;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	16627552	16627651	.	+	.	Name=Cob_diameter;B73v2_pos=2:15998887;1allele=C/G;version=Hapmap2;RS=rs131310625;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	16653319	16653418	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:16022267;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16653664	16653763	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:16022612;1allele=A/G;version=Hapmap2;RS=rs823336300;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16653808	16653907	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:16022756;1allele=T/C;version=Hapmap2;RS=rs846060075;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16653826	16653925	.	+	.	Name=Protein;B73v2_pos=2:16022774;1allele=C/T;version=Hapmap2;RS=rs819777410;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	16654338	16654437	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:16023286;1allele=A/C;version=Hapmap2;RS=rs819771503;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	16657406	16657505	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:16026354;1allele=G/A;version=Hapmap2;RS=rs819738266;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16660196	16660295	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:16029144;1allele=C/A;version=Hapmap2;RS=rs813041235;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	16660372	16660471	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:16029320;1allele=T/C;version=Hapmap2;RS=rs726438297;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16669745	16669844	.	+	.	Name=Ear_height;B73v2_pos=2:16038693;1allele=G/T;version=Hapmap1;RS=rs131310786;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	16737972	16738071	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:16106915;1allele=G/A;version=Hapmap2;RS=rs1062791692;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16738317	16738416	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:16107260;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16750744	16750843	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:16119687;1allele=G/A;version=Hapmap2;RS=rs846310063;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16751378	16751477	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:16120321;1allele=C/G;version=Hapmap2;RS=rs818453342;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	16751666	16751765	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:16120609;1allele=G/A;version=Hapmap2;RS=rs725789199;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16752307	16752406	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:16121250;1allele=A/C;version=Hapmap2;RS=rs830079967;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	16753130	16753229	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:16122073;1allele=C/T;version=Hapmap2;RS=rs828895306;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16788189	16788288	.	+	.	Name=Protein;B73v2_pos=2:16157868;1allele=C/T;version=Hapmap2;RS=rs1062100343;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	16788566	16788665	.	+	.	Name=Protein;B73v2_pos=2:16158245;1allele=A/G;version=Hapmap2;RS=rs1064666162;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16851284	16851383	.	+	.	Name=Cob_diameter;B73v2_pos=2:16220967;1allele=C/G;version=Hapmap2;RS=rs131310945;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	16864655	16864754	.	+	.	Name=Ear_height;B73v2_pos=2:16234339;1allele=T/G;version=Hapmap1;RS=rs131311030;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	16873036	16873135	.	+	.	Name=Protein;B73v2_pos=2:16242720;1allele=A/G;version=Hapmap2;RS=rs823216421;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16915052	16915151	.	+	.	Name=Ear_height;B73v2_pos=2:16293302;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16969524	16969623	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:16341489;1allele=T/C;version=Hapmap2;RS=rs1064623045;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16977570	16977669	.	+	.	Name=Leaf_length;B73v2_pos=2:16349535;1allele=G/A;version=Hapmap2;RS=rs131311234;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16977884	16977983	.	+	.	Name=Leaf_length;B73v2_pos=2:16349849;1allele=G/A;version=Hapmap2;RS=rs276626923;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16977922	16978021	.	+	.	Name=Leaf_length;B73v2_pos=2:16349887;1allele=T/C;version=Hapmap2;RS=rs276626924;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16977938	16978037	.	+	.	Name=Leaf_length;B73v2_pos=2:16349903;1allele=C/A;version=Hapmap2;RS=rs807310205;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	16978396	16978495	.	+	.	Name=Leaf_length;B73v2_pos=2:16350361;1allele=G/A;version=Hapmap2;RS=rs820361861;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	16979216	16979315	.	+	.	Name=Leaf_length;B73v2_pos=2:16351181;1allele=T/G;version=Hapmap2;RS=rs129022529;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	16980620	16980719	.	+	.	Name=Ear_height;B73v2_pos=2:16352585;1allele=C/T;version=Hapmap2;RS=rs832659109;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	16980669	16980768	.	+	.	Name=Ear_height;B73v2_pos=2:16352634;1allele=T/C;version=Hapmap2;RS=rs276626964;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	16981093	16981192	.	+	.	Name=Leaf_length;B73v2_pos=2:16353058;1allele=C/T;version=Hapmap2;RS=rs129022548;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	16981261	16981360	.	+	.	Name=Leaf_length;B73v2_pos=2:16353226;1allele=A/G;version=Hapmap2;RS=rs809976645;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	16981280	16981379	.	+	.	Name=Leaf_length;B73v2_pos=2:16353245;1allele=C/T;version=Hapmap2;RS=rs818737319;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	16981622	16981721	.	+	.	Name=Ear_height;B73v2_pos=2:16353587;1allele=G/C;version=Hapmap1;RS=rs846311681;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	16988105	16988204	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:16360070;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	16994367	16994466	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:16366331;1allele=T/C;version=Hapmap2;RS=rs803154178;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	17000211	17000310	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:16372176;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17027435	17027534	.	+	.	Name=Ear_height;B73v2_pos=2:16398859;1allele=T/G;version=Hapmap2;RS=rs848434005;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	17027800	17027899	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:16399224;1allele=T/C;version=Hapmap2;RS=rs806273266;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	17033152	17033251	.	+	.	Name=Leaf_width;B73v2_pos=2:16404576;1allele=A/C;version=Hapmap1;RS=rs726703910;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	17044864	17044963	.	+	.	Name=Leaf_width;B73v2_pos=2:16416289;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17137777	17137876	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:16509207;1allele=A/G;version=Hapmap2;RS=rs844885256;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	17165668	17165767	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:16531938;1allele=C/T;version=Hapmap2;RS=rs131311465;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	17180826	17180925	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:16540724;1allele=G/A;version=Hapmap2;RS=rs131311525;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	17180827	17180926	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:16540725;1allele=C/G;version=Hapmap2;RS=rs131311526;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	17263911	17264010	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:16637499;1allele=C/G;version=Hapmap2;RS=rs131311763;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	17273273	17273372	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:16646861;1allele=T/C;version=Hapmap2;RS=rs833524919;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	17273290	17273389	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:16646878;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17273471	17273570	.	+	.	Name=Sucrose;B73v2_pos=2:16647059;1allele=C/T;version=Hapmap2;RS=rs129023025;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	17281216	17281315	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:16654804;1allele=A/G;version=Hapmap2;RS=rs131311941;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	17282128	17282227	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:16655716;1allele=T/C;version=Hapmap2;RS=rs819630611;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	17282487	17282586	.	+	.	Name=Leaf_width;B73v2_pos=2:16656075;1allele=A/T;version=Hapmap2;RS=rs818952986;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	17357210	17357309	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:16676682;1allele=+/-;version=Hapmap2;RS=rs837830172;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	17376097	17376196	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:16584109;1allele=A/C;version=Hapmap2;RS=rs831187769;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	17534168	17534267	.	+	.	Name=Ear_row_number;B73v2_pos=10:139747867;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17534789	17534888	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=10:139747246;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17536869	17536968	.	+	.	Name=Ear_row_number;B73v2_pos=10:139745167;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17537787	17537886	.	+	.	Name=Ear_row_number;B73v2_pos=10:139744249;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17537868	17537967	.	+	.	Name=Cob_diameter;B73v2_pos=10:139744168;1allele=C/T;version=Hapmap2;RS=rs829132463;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	17537868	17537967	.	+	.	Name=Ear_row_number;B73v2_pos=10:139744168;1allele=C/T;version=Hapmap2;RS=rs829132463;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	17539418	17539517	.	+	.	Name=Ear_row_number;B73v2_pos=10:139742618;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17546954	17547053	.	+	.	Name=Nodes_per_plant;B73v2_pos=10:139735082;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17547099	17547198	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:139734937;1allele=A/C;version=Hapmap2;RS=rs832147176;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	17954257	17954356	.	+	.	Name=Leaf_length;B73v2_pos=10:139316369;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17956639	17956738	.	+	.	Name=Ear_row_number;B73v2_pos=10:139313987;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17958615	17958714	.	+	.	Name=Ear_row_number;B73v2_pos=10:139312011;1allele=G/A;version=Hapmap2;RS=rs808895477;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	17963247	17963346	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139307379;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17963790	17963889	.	+	.	Name=Leaf_width;B73v2_pos=10:139306836;1allele=TA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17965986	17966085	.	+	.	Name=Nodes_to_ear;B73v2_pos=10:139304639;1allele=/GCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	17969235	17969334	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:139301390;1allele=AAT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	18296376	18296475	.	+	.	Name=Ear_height;B73v2_pos=2:16867998;1allele=A/T;version=Hapmap1;RS=rs129023122;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	18296694	18296793	.	+	.	Name=Ear_height;B73v2_pos=2:16868316;1allele=A/G;version=Hapmap1;RS=rs131312108;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	18297367	18297466	.	+	.	Name=Ear_height;B73v2_pos=2:16868989;1allele=G/A;version=Hapmap2;RS=rs841840025;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	18303481	18303580	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:16875104;1allele=A/T;version=Hapmap2;RS=rs820529818;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	18303530	18303629	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:16875153;1allele=C/T;version=Hapmap2;RS=rs803351449;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	18305846	18305945	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:16877469;1allele=C/T;version=Hapmap2;RS=rs131312187;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	18357940	18358039	.	+	.	Name=Ear_row_number;B73v2_pos=2:16914849;1allele=C/T;version=Hapmap2;RS=rs816128990;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	18374031	18374130	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:16930946;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	18375872	18375971	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:16932787;1allele=A/G;version=Hapmap2;RS=rs821806581;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	18387891	18387990	.	+	.	Name=Ear_row_number;B73v2_pos=2:16944806;1allele=G/A;version=Hapmap2;RS=rs817556389;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	18515832	18515931	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:17091112;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	18517377	18517476	.	+	.	Name=Ear_height;B73v2_pos=2:17092657;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	18522846	18522945	.	+	.	Name=Leaf_length;B73v2_pos=2:17098126;1allele=G/C;version=Hapmap2;RS=rs276628055;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	18526425	18526524	.	+	.	Name=Leaf_length;B73v2_pos=2:17101705;1allele=C/T;version=Hapmap1;RS=rs131312563;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	18527124	18527223	.	+	.	Name=Leaf_length;B73v2_pos=2:17102404;1allele=C/T;version=Hapmap2;RS=rs129023455;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	18578072	18578171	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17153350;1allele=T/C;version=Hapmap2;RS=rs848928204;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	18601292	18601391	.	+	.	Name=Ear_height;B73v2_pos=2:17176575;1allele=G/A;version=Hapmap2;RS=rs842046898;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	18616989	18617088	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:17192751;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	18638892	18638991	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:17215531;1allele=T/C;version=Hapmap2;RS=rs818255730;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	18639605	18639704	.	+	.	Name=Ear_height;B73v2_pos=2:17216244;1allele=C/T;version=Hapmap2;RS=rs822432428;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	18639673	18639772	.	+	.	Name=Ear_height;B73v2_pos=2:17216312;1allele=C/T;version=Hapmap1;RS=rs131312648;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	18754280	18754379	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:17331279;1allele=T/C;version=Hapmap2;RS=rs838469588;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	18882188	18882287	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:17458199;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	18916651	18916750	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:17492654;1allele=A/G;version=Hapmap2;RS=rs129024247;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	18998675	18998774	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17573486;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19005136	19005235	.	+	.	Name=Ear_row_number;B73v2_pos=2:17579947;1allele=G/A;version=Hapmap2;RS=rs821940385;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	19006583	19006682	.	+	.	Name=Leaf_length;B73v2_pos=2:17581394;1allele=A/G;version=Hapmap2;RS=rs131312990;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	19007001	19007100	.	+	.	Name=Leaf_length;B73v2_pos=2:17581812;1allele=A/T;version=Hapmap2;RS=rs847309665;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	19007177	19007276	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17581988;1allele=G/A;version=Hapmap2;RS=rs727325891;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	19036453	19036552	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17612032;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19044410	19044509	.	+	.	Name=Cob_diameter;B73v2_pos=2:17604077;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19073253	19073352	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:17648286;1allele=A/G;version=Hapmap2;RS=rs838419846;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	19084263	19084362	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17659143;1allele=G/T;version=Hapmap2;RS=rs810683454;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	19099271	19099370	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:17674315;1allele=C/G;version=Hapmap2;RS=rs805143714;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	19099367	19099466	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:17674411;1allele=G/C;version=Hapmap2;RS=rs843884068;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	19099614	19099713	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17674658;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19099647	19099746	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17674691;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19099943	19100042	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17674987;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19099967	19100066	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17675011;1allele=T/C;version=Hapmap2;RS=rs831087149;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	19116304	19116403	.	+	.	Name=Ear_row_number;B73v2_pos=2:17691344;1allele=C/T;version=Hapmap2;RS=rs846463060;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	19217299	19217398	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:17787328;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19277461	19277560	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:17854194;1allele=T/C;version=Hapmap2;RS=rs801501970;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	19410851	19410950	.	+	.	Name=Leaf_length;B73v2_pos=2:17994419;1allele=A/C;version=Hapmap2;RS=rs835946059;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	19522050	19522149	.	+	.	Name=Plant_height;B73v2_pos=2:18106172;1allele=G/T;version=Hapmap2;RS=rs813269033;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	19523179	19523278	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:18107301;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19542990	19543089	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:18127097;1allele=G/A;version=Hapmap2;RS=rs812877285;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	19547032	19547131	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:18131139;1allele=G/T;version=Hapmap2;RS=rs802687873;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	19628033	19628132	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:18210955;1allele=C/T;version=Hapmap1;RS=rs129024958;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	19636164	19636263	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:18219086;1allele=A/T;version=Hapmap2;RS=rs827999758;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	19638391	19638490	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:18221313;1allele=G/A;version=Hapmap2;RS=rs819072852;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	19638409	19638508	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:18221331;1allele=G/A;version=Hapmap2;RS=rs804852248;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	19652964	19653063	.	+	.	Name=Leaf_length;B73v2_pos=2:18239749;1allele=A/C;version=Hapmap2;RS=rs839351776;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	19654272	19654371	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:18241057;1allele=T/C;version=Hapmap1;RS=rs131314337;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	19664956	19665055	.	+	.	Name=Cob_diameter;B73v2_pos=2:18251741;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19707501	19707600	.	+	.	Name=Ear_row_number;B73v2_pos=2:18307866;1allele=G/T;version=Hapmap2;RS=rs810544324;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	19714397	19714496	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:18314762;1allele=T/G;version=Hapmap2;RS=rs836189181;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	19766862	19766961	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:18364551;1allele=C/A;version=Hapmap2;RS=rs811981955;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	19770765	19770864	.	+	.	Name=Days_to_silk;B73v2_pos=2:18368454;1allele=A/C;version=Hapmap2;RS=rs804492564;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	19789172	19789271	.	+	.	Name=Cob_diameter;B73v2_pos=2:18383591;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19793728	19793827	.	+	.	Name=Cob_diameter;B73v2_pos=2:18388147;1allele=C/T;version=Hapmap2;RS=rs834931773;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	19822870	19822969	.	+	.	Name=Cob_diameter;B73v2_pos=2:18417299;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19841627	19841726	.	+	.	Name=Days_to_silk;B73v2_pos=2:18436055;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	19907630	19907729	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:18507690;1allele=A/G;version=Hapmap2;RS=rs129025303;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	20020026	20020125	.	+	.	Name=Ear_height;B73v2_pos=2:18619764;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	20022148	20022247	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:18621886;1allele=G/T;version=Hapmap2;RS=rs129025571;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	20024596	20024695	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:18624334;1allele=T/C;version=Hapmap2;RS=rs833858182;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	20030387	20030486	.	+	.	Name=Leaf_length;B73v2_pos=2:18630125;1allele=C/G;version=Hapmap2;RS=rs839573479;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	20057054	20057153	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:18646088;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	20057072	20057171	.	+	.	Name=Days_to_silk;B73v2_pos=2:18646070;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	20080662	20080761	.	+	.	Name=Cob_diameter;B73v2_pos=2:18736215;1allele=T/C;version=Hapmap2;RS=rs814836908;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	20217609	20217708	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:18809346;1allele=-/+;version=Hapmap2;RS=rs838139148;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20578311	20578410	.	+	.	Name=Tassel_length;B73v2_pos=2:19150900;1allele=C/A;version=Hapmap2;RS=rs846520788;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	20578381	20578480	.	+	.	Name=Height_above_ear;B73v2_pos=2:19150970;1allele=C/T;version=Hapmap2;RS=rs276630699;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20623620	20623719	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:19194809;1allele=C/T;version=Hapmap2;RS=rs802679500;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20624111	20624210	.	+	.	Name=Plant_height;B73v2_pos=2:19195300;1allele=/GC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	20647352	20647451	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:19218541;1allele=G/T;version=Hapmap2;RS=rs727242877;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	20686317	20686416	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:19257512;1allele=A/G;version=Hapmap2;RS=rs129026189;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	20692550	20692649	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:19263745;1allele=G/A;version=Hapmap2;RS=rs131315482;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	20696150	20696249	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:19267345;1allele=A/C;version=Hapmap2;RS=rs810755677;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	20697092	20697191	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:19268287;1allele=G/A;version=Hapmap2;RS=rs828310493;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	20709296	20709395	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:19282862;1allele=C/T;version=Hapmap2;RS=rs276630830;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20744003	20744102	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:19318892;1allele=T/C;version=Hapmap2;RS=rs844784749;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	20751586	20751685	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:19326425;1allele=G/A;version=Hapmap2;RS=rs833587282;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	20752326	20752425	.	+	.	Name=Height_above_ear;B73v2_pos=2:19327165;1allele=A/C;version=Hapmap2;RS=rs817862241;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	20752328	20752427	.	+	.	Name=Plant_height;B73v2_pos=2:19327167;1allele=T/C;version=Hapmap2;RS=rs846556091;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	20801483	20801582	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:19376325;1allele=G/A;version=Hapmap2;RS=rs276630993;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	20806989	20807088	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:19382232;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	20856351	20856450	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:19430305;1allele=A/G;version=Hapmap2;RS=rs276631092;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	20864619	20864718	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:19438520;1allele=G/A;version=Hapmap2;RS=rs129026592;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	20884301	20884400	.	+	.	Name=Height_above_ear;B73v2_pos=2:19458201;1allele=G/T;version=Hapmap2;RS=rs803037696;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	20891358	20891457	.	+	.	Name=Height_above_ear;B73v2_pos=2:19465258;1allele=G/T;version=Hapmap2;RS=rs129026681;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	20893554	20893653	.	+	.	Name=Height_above_ear;B73v2_pos=2:19467454;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	20900402	20900501	.	+	.	Name=Height_above_ear;B73v2_pos=2:19469211;1allele=A/G;version=Hapmap2;RS=rs129026689;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	20902459	20902558	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19471267;1allele=T/G;version=Hapmap2;RS=rs129026703;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	20912778	20912877	.	+	.	Name=Height_above_ear;B73v2_pos=2:19481587;1allele=C/T;version=Hapmap2;RS=rs129026722;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20912924	20913023	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19481733;1allele=C/T;version=Hapmap2;RS=rs129026724;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20916789	20916888	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:19485599;1allele=C/T;version=Hapmap2;RS=rs129026735;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20919344	20919443	.	+	.	Name=Height_above_ear;B73v2_pos=2:19488156;1allele=C/T;version=Hapmap2;RS=rs129026747;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20928617	20928716	.	+	.	Name=Height_above_ear;B73v2_pos=2:19497433;1allele=C/T;version=Hapmap2;RS=rs129026788;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	20942582	20942681	.	+	.	Name=Height_above_ear;B73v2_pos=2:19533058;1allele=G/A;version=Hapmap2;RS=rs129026818;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	20943458	20943557	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19533934;1allele=C/T;version=Hapmap2;RS=rs276631382;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	21015662	21015761	.	+	.	Name=Height_above_ear;B73v2_pos=2:19585271;1allele=G/T;version=Hapmap2;RS=rs129026931;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	21029239	21029338	.	+	.	Name=Height_above_ear;B73v2_pos=2:19598849;1allele=C/T;version=Hapmap2;RS=rs129026972;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21081406	21081505	.	+	.	Name=Height_above_ear;B73v2_pos=2:19651020;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	21081406	21081505	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19651020;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	21087358	21087457	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19656970;1allele=T/C;version=Hapmap2;RS=rs845325945;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21100394	21100493	.	+	.	Name=Height_above_ear;B73v2_pos=2:19670008;1allele=A/G;version=Hapmap2;RS=rs805597945;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	21107505	21107604	.	+	.	Name=Ear_height;B73v2_pos=2:19677135;1allele=T/C;version=Hapmap2;RS=rs276631626;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21113384	21113483	.	+	.	Name=Height_above_ear;B73v2_pos=2:19682822;1allele=C/A;version=Hapmap2;RS=rs821821482;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	21121825	21121924	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19691269;1allele=C/G;version=Hapmap2;RS=rs844666327;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	21177948	21178047	.	+	.	Name=Height_above_ear;B73v2_pos=2:19746655;1allele=T/C;version=Hapmap2;RS=rs129027247;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21196505	21196604	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19765213;1allele=T/C;version=Hapmap2;RS=rs830125518;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21224563	21224662	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:19794033;1allele=A/G;version=Hapmap2;RS=rs129027343;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	21224969	21225068	.	+	.	Name=Height_above_ear;B73v2_pos=2:19794439;1allele=T/C;version=Hapmap2;RS=rs129027352;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21260555	21260654	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:19830295;1allele=G/C;version=Hapmap2;RS=rs837124613;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	21400053	21400152	.	+	.	Name=Plant_height;B73v2_pos=2:19965354;1allele=T/C;version=Hapmap2;RS=rs802162274;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21422237	21422336	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:19987680;1allele=A/G;version=Hapmap2;RS=rs802976334;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	21424035	21424134	.	+	.	Name=Tassel_length;B73v2_pos=2:19989478;1allele=G/A;version=Hapmap1;RS=rs131178095;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	21535028	21535127	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:20096826;1allele=C/T;version=Hapmap1;RS=rs131316347;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	21535186	21535285	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:20096984;1allele=A/G;version=Hapmap1;RS=rs131316350;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	21536234	21536333	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:20098032;1allele=T/C;version=Hapmap2;RS=rs841927307;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21536786	21536885	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:20098584;1allele=T/G;version=Hapmap2;RS=rs131316382;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	21553293	21553392	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:20115122;1allele=A/G;version=Hapmap2;RS=rs1061372887;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	21846077	21846176	.	+	.	Name=Total_amino_acids;B73v2_pos=2:20402739;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	21847557	21847656	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:20404219;1allele=A/G;version=Hapmap2;RS=rs276632446;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	21856711	21856810	.	+	.	Name=Plant_height;B73v2_pos=2:20413374;1allele=G/A;version=Hapmap2;RS=rs834449788;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	21856711	21856810	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:20413374;1allele=G/A;version=Hapmap2;RS=rs834449788;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	21856730	21856829	.	+	.	Name=Plant_height;B73v2_pos=2:20413393;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	21856802	21856901	.	+	.	Name=Plant_height;B73v2_pos=2:20413465;1allele=T/C;version=Hapmap2;RS=rs129027936;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21856802	21856901	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:20413465;1allele=T/C;version=Hapmap2;RS=rs129027936;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21862296	21862395	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:20418959;1allele=C/G;version=Hapmap2;RS=rs814105471;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	21922272	21922371	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:20478664;1allele=G/A;version=Hapmap2;RS=rs827052297;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	21923450	21923549	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:20479842;1allele=G/A;version=Hapmap2;RS=rs725270127;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	21960912	21961011	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:20520536;1allele=A/G;version=Hapmap2;RS=rs821622140;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	21968554	21968653	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:20528172;1allele=A/T;version=Hapmap2;RS=rs820039951;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	21968554	21968653	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:20528172;1allele=A/T;version=Hapmap2;RS=rs820039951;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	21968965	21969064	.	+	.	Name=Leaf_length;B73v2_pos=2:20528583;1allele=A/G;version=Hapmap2;RS=rs802264013;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	21969817	21969916	.	+	.	Name=Height_above_ear;B73v2_pos=2:20529435;1allele=A/T;version=Hapmap2;RS=rs129028099;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	21969848	21969947	.	+	.	Name=Height_above_ear;B73v2_pos=2:20529466;1allele=T/C;version=Hapmap2;RS=rs129028101;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21969879	21969978	.	+	.	Name=Height_above_ear;B73v2_pos=2:20529497;1allele=T/C;version=Hapmap2;RS=rs848719773;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	21999152	21999251	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:20558755;1allele=A/T;version=Hapmap2;RS=rs129028228;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	21999903	22000002	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:20559506;1allele=G/A;version=Hapmap2;RS=rs129028242;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	22006369	22006468	.	+	.	Name=Height_above_ear;B73v2_pos=2:20565972;1allele=G/A;version=Hapmap2;RS=rs826897151;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	22033477	22033576	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:20593289;1allele=C/A;version=Hapmap2;RS=rs822671933;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	22056309	22056408	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:20616545;1allele=T/C;version=Hapmap2;RS=rs830830432;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	22112194	22112293	.	+	.	Name=Leaf_width;B73v2_pos=2:20718889;1allele=G/T;version=Hapmap2;RS=rs129028369;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	22115208	22115307	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:20721903;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	22115208	22115307	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:20721903;1allele=/CGTGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	22116414	22116513	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:20723109;1allele=G/C;version=Hapmap2;RS=rs131317432;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	22118161	22118260	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:20724856;1allele=C/T;version=Hapmap2;RS=rs810804732;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	22219192	22219291	.	+	.	Name=Tassel_length;B73v2_pos=2:20765568;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	22305766	22305865	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:20846294;1allele=C/T;version=Hapmap1;RS=rs131317525;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	22327436	22327535	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:20867965;1allele=G/A;version=Hapmap2;RS=rs1060569542;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	22390037	22390136	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:20955961;1allele=C/T;version=Hapmap2;RS=rs819897349;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	22535934	22536033	.	+	.	Name=Stalk_strength;B73v2_pos=2:21094143;1allele=G/C;version=Hapmap2;RS=rs808332809;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	22584027	22584124	.	+	.	Name=Glucose;B73v2_pos=2:21140011;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	22585696	22585795	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:21141682;1allele=A/G;version=Hapmap2;RS=rs810147499;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	22601306	22601405	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:21156498;1allele=A/G;version=Hapmap2;RS=rs824880357;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	22656123	22656222	.	+	.	Name=Stalk_strength;B73v2_pos=2:21211318;1allele=C/T;version=Hapmap2;RS=rs809324463;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	22688525	22688624	.	+	.	Name=Days_to_silk;B73v2_pos=2:21231195;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	22844494	22844593	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:21390913;1allele=C/T;version=Hapmap2;RS=rs845803169;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	22973094	22973193	.	+	.	Name=Ear_height;B73v2_pos=2:21510928;1allele=A/G;version=Hapmap2;RS=rs829219323;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	22973551	22973650	.	+	.	Name=Glucose;B73v2_pos=2:21511385;1allele=A/G;version=Hapmap2;RS=rs842892205;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	22973615	22973714	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:21511449;1allele=A/G;version=Hapmap2;RS=rs131318099;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	22975811	22975910	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:21513645;1allele=C/T;version=Hapmap2;RS=rs1062088266;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	22976093	22976192	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:21513927;1allele=G/T;version=Hapmap2;RS=rs276633805;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	22977689	22977788	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:21515523;1allele=G/A;version=Hapmap2;RS=rs276633814;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	23031816	23031915	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:21569164;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23085896	23085995	.	+	.	Name=Glucose;B73v2_pos=2:21632622;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23085981	23086080	.	+	.	Name=Stalk_strength;B73v2_pos=2:21632537;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23090719	23090818	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:21627799;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23116971	23117070	.	+	.	Name=Starch;B73v2_pos=2:21601549;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23118750	23118849	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:21599770;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23118896	23118995	.	+	.	Name=Stalk_strength;B73v2_pos=2:21599624;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23118918	23119017	.	+	.	Name=Stalk_strength;B73v2_pos=2:21599602;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23119086	23119185	.	+	.	Name=Starch;B73v2_pos=2:21599434;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23123541	23123640	.	+	.	Name=Days_to_silk;B73v2_pos=2:21594979;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23123567	23123666	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:21594953;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23152190	23152289	.	+	.	Name=Ear_row_number;B73v2_pos=2:21712288;1allele=G/T;version=Hapmap2;RS=rs806694278;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	23161785	23161884	.	+	.	Name=Stalk_strength;B73v2_pos=2:21721883;1allele=T/C;version=Hapmap2;RS=rs819421459;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	23166092	23166191	.	+	.	Name=Days_to_silk;B73v2_pos=2:21726190;1allele=T/C;version=Hapmap2;RS=rs810430110;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	23166335	23166434	.	+	.	Name=Days_to_silk;B73v2_pos=2:21726433;1allele=T/A;version=Hapmap1;RS=rs849763987;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	23171422	23171521	.	+	.	Name=Ear_height;B73v2_pos=2:21731520;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23171900	23171999	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:21731998;1allele=/CAGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23232727	23232826	.	+	.	Name=Ear_row_number;B73v2_pos=2:21792725;1allele=/CCA;version=Hapmap1;RS=rs131318641;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	23233272	23233371	.	+	.	Name=Starch;B73v2_pos=2:21793270;1allele=T/C;version=Hapmap2;RS=rs131318654;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	23234939	23235038	.	+	.	Name=Glucose;B73v2_pos=2:21794937;1allele=G/A;version=Hapmap2;RS=rs276634106;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	23235169	23235268	.	+	.	Name=Glucose;B73v2_pos=2:21795167;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23235273	23235372	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:21795271;1allele=A/G;version=Hapmap2;RS=rs724763432;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	23235370	23235469	.	+	.	Name=Starch;B73v2_pos=2:21795368;1allele=G/C;version=Hapmap1;RS=rs129030252;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	23236500	23236599	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:21796498;1allele=G/A;version=Hapmap2;RS=rs822669530;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	23242744	23242843	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:21802619;1allele=C/T;version=Hapmap2;RS=rs276634141;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	23258528	23258627	.	+	.	Name=Cob_diameter;B73v2_pos=2:21818691;1allele=T/C;version=Hapmap2;RS=rs824753986;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	23259637	23259736	.	+	.	Name=Ear_height;B73v2_pos=2:21819800;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23317825	23317924	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:21870951;1allele=A/G;version=Hapmap2;RS=rs811341973;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	23343790	23343889	.	+	.	Name=Stalk_strength;B73v2_pos=2:21901737;1allele=T/A;version=Hapmap2;RS=rs802978203;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	23421100	23421199	.	+	.	Name=Sucrose;B73v2_pos=2:21979873;1allele=T/C;version=Hapmap2;RS=rs843962794;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	23472071	23472170	.	+	.	Name=Tassel_length;B73v2_pos=2:22030854;1allele=C/A;version=Hapmap2;RS=rs834028783;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	23476858	23476957	.	+	.	Name=Sucrose;B73v2_pos=2:22035641;1allele=C/A;version=Hapmap2;RS=rs809683277;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	23477827	23477926	.	+	.	Name=Sucrose;B73v2_pos=2:22036610;1allele=C/T;version=Hapmap1;RS=rs131319036;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	23510318	23510417	.	+	.	Name=Glucose;B73v2_pos=2:22069102;1allele=A/G;version=Hapmap2;RS=rs131319106;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	23514491	23514590	.	+	.	Name=Starch;B73v2_pos=2:22073275;1allele=C/T;version=Hapmap1;RS=rs131319150;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	23514664	23514763	.	+	.	Name=Glucose;B73v2_pos=2:22073448;1allele=/TCGTGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23515709	23515808	.	+	.	Name=Glucose;B73v2_pos=2:22074493;1allele=A/C;version=Hapmap1;RS=rs131319161;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	23515720	23515819	.	+	.	Name=Glucose;B73v2_pos=2:22074504;1allele=T/G;version=Hapmap1;RS=rs131319162;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	23515754	23515853	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:22074538;1allele=G/T;version=Hapmap2;RS=rs131319164;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	23515754	23515853	.	+	.	Name=Glucose;B73v2_pos=2:22074538;1allele=G/T;version=Hapmap1;RS=rs131319164;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	23582798	23582897	.	+	.	Name=Ear_row_number;B73v2_pos=2:22143724;1allele=C/T;version=Hapmap2;RS=rs845173596;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	23582908	23583007	.	+	.	Name=Starch;B73v2_pos=2:22143834;1allele=T/A;version=Hapmap2;RS=rs276634644;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	23632209	23632308	.	+	.	Name=Starch;B73v2_pos=2:22193492;1allele=A/G;version=Hapmap2;RS=rs131319252;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	23632646	23632745	.	+	.	Name=Starch;B73v2_pos=2:22193929;1allele=G/A;version=Hapmap2;RS=rs131319264;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	23633862	23633961	.	+	.	Name=Starch;B73v2_pos=2:22195142;1allele=C/A;version=Hapmap2;RS=rs131319284;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	23634424	23634523	.	+	.	Name=Plant_height;B73v2_pos=2:22195704;1allele=T/A;version=Hapmap2;RS=rs725586033;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	23670076	23670175	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:22231359;1allele=A/T;version=Hapmap2;RS=rs841904237;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	23716445	23716544	.	+	.	Name=Sucrose;B73v2_pos=2:22280697;1allele=T/G;version=Hapmap2;RS=rs129030654;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	23728972	23729071	.	+	.	Name=Sucrose;B73v2_pos=2:22293224;1allele=T/G;version=Hapmap2;RS=rs276635053;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	23738670	23738769	.	+	.	Name=Glucose;B73v2_pos=2:22302921;1allele=G/A;version=Hapmap2;RS=rs276635084;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	23739213	23739312	.	+	.	Name=Starch;B73v2_pos=2:22303464;1allele=T/C;version=Hapmap2;RS=rs129030709;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	23739266	23739365	.	+	.	Name=Starch;B73v2_pos=2:22303517;1allele=G/A;version=Hapmap2;RS=rs129030711;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	23780105	23780204	.	+	.	Name=Plant_height;B73v2_pos=2:22339745;1allele=C/T;version=Hapmap2;RS=rs813053965;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	23781078	23781177	.	+	.	Name=Glucose;B73v2_pos=2:22338772;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23782009	23782108	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:22337841;1allele=G/A;version=Hapmap2;RS=rs808329916;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	23782708	23782807	.	+	.	Name=Glucose;B73v2_pos=2:22337142;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23782853	23782952	.	+	.	Name=Starch;B73v2_pos=2:22336997;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	23910181	23910280	.	+	.	Name=Starch;B73v2_pos=2:22497917;1allele=A/G;version=Hapmap2;RS=rs276635309;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	23910181	23910280	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:22497917;1allele=A/G;version=Hapmap2;RS=rs276635309;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	23914115	23914214	.	+	.	Name=Starch;B73v2_pos=2:22501851;1allele=T/G;version=Hapmap2;RS=rs816397011;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	23934605	23934704	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:22522341;1allele=T/C;version=Hapmap2;RS=rs838841303;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	24045970	24046069	.	+	.	Name=Sucrose;B73v2_pos=2:22579657;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24149371	24149470	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:22707803;1allele=A/G;version=Hapmap2;RS=rs834062557;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	24151402	24151501	.	+	.	Name=Ear_height;B73v2_pos=2:22705772;1allele=/CGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24207681	24207780	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:22755322;1allele=/CG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24298017	24298116	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:22885187;1allele=C/T;version=Hapmap1;RS=rs131319998;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	24298099	24298198	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:22885269;1allele=G/T;version=Hapmap1;RS=rs131320000;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	24387369	24387468	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:22943060;1allele=C/G;version=Hapmap2;RS=rs842721874;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	24387398	24387497	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:22943089;1allele=G/C;version=Hapmap2;RS=rs822476846;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	24389557	24389656	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:22945248;1allele=T/G;version=Hapmap1;RS=rs131320067;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	24394129	24394228	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:22949820;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24401004	24401103	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:22956562;1allele=C/G;version=Hapmap1;RS=rs131320463;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	24402592	24402691	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:22958150;1allele=A/T;version=Hapmap1;RS=rs131320498;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	24403047	24403146	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:22958605;1allele=G/C;version=Hapmap2;RS=rs276635986;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	24418908	24419007	.	+	.	Name=Ear_row_number;B73v2_pos=2:22974466;1allele=C/A;version=Hapmap1;RS=rs727446789;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	24419299	24419398	.	+	.	Name=Sucrose;B73v2_pos=2:22974857;1allele=T/G;version=Hapmap2;RS=rs843806363;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	24428736	24428835	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:22984004;1allele=A/G;version=Hapmap2;RS=rs825436956;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	24428779	24428878	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:22984047;1allele=G/C;version=Hapmap2;RS=rs848879492;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	24431302	24431401	.	+	.	Name=Starch;B73v2_pos=2:22986571;1allele=G/A;version=Hapmap2;RS=rs131320202;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	24443689	24443788	.	+	.	Name=Ear_height;B73v2_pos=2:22999795;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24499814	24499913	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:23051299;1allele=A/G;version=Hapmap2;RS=rs804645363;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	24510128	24510227	.	+	.	Name=Ear_row_number;B73v2_pos=2:23062321;1allele=T/G;version=Hapmap2;RS=rs817326540;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	24510134	24510233	.	+	.	Name=Ear_row_number;B73v2_pos=2:23062327;1allele=A/G;version=Hapmap2;RS=rs809686845;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	24541152	24541251	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:23093362;1allele=A/T;version=Hapmap1;RS=rs129031542;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	24546284	24546383	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:23098494;1allele=T/G;version=Hapmap2;RS=rs831137191;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	24572535	24572634	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:23124659;1allele=C/A;version=Hapmap2;RS=rs276636459;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	24584350	24584449	.	+	.	Name=Plant_height;B73v2_pos=2:23136470;1allele=T/A;version=Hapmap2;RS=rs129031703;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	24584350	24584449	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:23136470;1allele=T/A;version=Hapmap2;RS=rs129031703;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	24639422	24639521	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:23191424;1allele=A/G;version=Hapmap2;RS=rs129031789;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	24718429	24718528	.	+	.	Name=Starch;B73v2_pos=2:23270219;1allele=A/G;version=Hapmap2;RS=rs129031913;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	24804889	24804988	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:23323666;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24808601	24808700	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:23319953;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24808639	24808738	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:23319915;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	24856812	24856911	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:23414622;1allele=T/C;version=Hapmap2;RS=rs843117440;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	24976618	24976717	.	+	.	Name=Sucrose;B73v2_pos=2:23532523;1allele=G/C;version=Hapmap1;RS=rs131321133;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	24986960	24987059	.	+	.	Name=Ear_row_number;B73v2_pos=2:23542866;1allele=C/T;version=Hapmap2;RS=rs727165493;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	25059357	25059456	.	+	.	Name=Ear_row_number;B73v2_pos=2:23622326;1allele=C/T;version=Hapmap2;RS=rs804592585;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	25104164	25104263	.	+	.	Name=Ear_row_number;B73v2_pos=2:23664504;1allele=G/A;version=Hapmap1;RS=rs131321285;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	25105361	25105460	.	+	.	Name=Fumarate;B73v2_pos=2:23665701;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	25107214	25107313	.	+	.	Name=Starch;B73v2_pos=2:23667554;1allele=G/A;version=Hapmap2;RS=rs819089347;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	25109313	25109412	.	+	.	Name=Ear_row_number;B73v2_pos=2:23669653;1allele=G/-;version=Hapmap1;RS=rs131321353;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	25111160	25111259	.	+	.	Name=Ear_row_number;B73v2_pos=2:23671500;1allele=A/G;version=Hapmap2;RS=rs276637161;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	25140206	25140305	.	+	.	Name=Ear_row_number;B73v2_pos=2:23699679;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	25144773	25144872	.	+	.	Name=Ear_row_number;B73v2_pos=2:23704246;1allele=C/T;version=Hapmap2;RS=rs129032478;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	25152114	25152213	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:23711587;1allele=C/G;version=Hapmap2;RS=rs131321384;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	25158233	25158332	.	+	.	Name=Tassel_length;B73v2_pos=2:23717706;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	25159166	25159265	.	+	.	Name=Ear_row_number;B73v2_pos=2:23718639;1allele=T/C;version=Hapmap2;RS=rs817728612;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	25159226	25159325	.	+	.	Name=Sucrose;B73v2_pos=2:23718699;1allele=T/C;version=Hapmap2;RS=rs801458555;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	25159404	25159503	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:23718877;1allele=T/A;version=Hapmap2;RS=rs837755003;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	25159404	25159503	.	+	.	Name=Ear_height;B73v2_pos=2:23718877;1allele=T/A;version=Hapmap2;RS=rs837755003;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	25206928	25207027	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:23766402;1allele=A/C;version=Hapmap2;RS=rs276637276;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	25212007	25212106	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:23771481;1allele=G/A;version=Hapmap2;RS=rs129032711;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	25213590	25213689	.	+	.	Name=Stalk_strength;B73v2_pos=2:23773064;1allele=A/G;version=Hapmap2;RS=rs276637283;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	25277100	25277199	.	+	.	Name=Days_to_silk;B73v2_pos=2:23828497;1allele=G/A;version=Hapmap2;RS=rs1063965740;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	25332260	25332359	.	+	.	Name=Tassel_length;B73v2_pos=2:23887545;1allele=C/G;version=Hapmap2;RS=rs129032944;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	25412619	25412718	.	+	.	Name=Stalk_strength;B73v2_pos=2:23978090;1allele=C/T;version=Hapmap2;RS=rs849787774;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	25413119	25413218	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:23978590;1allele=A/C;version=Hapmap1;RS=rs131322021;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	25413119	25413218	.	+	.	Name=Ear_row_number;B73v2_pos=2:23978590;1allele=A/C;version=Hapmap1;RS=rs131322021;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	25446506	25446605	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:24011978;1allele=G/C;version=Hapmap2;RS=rs814595838;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	25446506	25446605	.	+	.	Name=Plant_height;B73v2_pos=2:24011978;1allele=G/C;version=Hapmap2;RS=rs814595838;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	25446506	25446605	.	+	.	Name=Ear_height;B73v2_pos=2:24011978;1allele=G/C;version=Hapmap2;RS=rs814595838;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	25446506	25446605	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:24011978;1allele=G/C;version=Hapmap2;RS=rs814595838;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	25631333	25631432	.	+	.	Name=Ear_row_number;B73v2_pos=2:24171123;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	25631351	25631450	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:24171141;1allele=A/G;version=Hapmap1;RS=rs131322106;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	25693553	25693652	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:24368086;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	25703969	25704068	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:24357671;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	25730936	25731035	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:24255542;1allele=G/A;version=Hapmap2;RS=rs816273651;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	25731540	25731639	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:24256146;1allele=G/A;version=Hapmap2;RS=rs727221399;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	25753029	25753129	.	+	.	Name=Tassel_length;B73v2_pos=2:24277636;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	25786523	25786622	.	+	.	Name=Starch;B73v2_pos=2:24307468;1allele=C/A;version=Hapmap2;RS=rs276637608;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	25793147	25793246	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:24314093;1allele=T/C;version=Hapmap2;RS=rs129033468;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	25799519	25799618	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:24320466;1allele=G/A;version=Hapmap2;RS=rs131322220;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	25800682	25800781	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:24321629;1allele=C/T;version=Hapmap1;RS=rs812257494;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	25810666	25810765	.	+	.	Name=Ear_height;B73v2_pos=2:24331614;1allele=G/A;version=Hapmap2;RS=rs837218327;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	25810666	25810765	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:24331614;1allele=G/A;version=Hapmap2;RS=rs837218327;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	25825189	25825288	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:24386383;1allele=T/G;version=Hapmap2;RS=rs1063809447;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	25827039	25827138	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:24388137;1allele=T/G;version=Hapmap2;RS=rs131322242;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	25834619	25834718	.	+	.	Name=Sucrose;B73v2_pos=2:24395717;1allele=C/T;version=Hapmap2;RS=rs801956239;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	25835071	25835170	.	+	.	Name=Sucrose;B73v2_pos=2:24396169;1allele=C/A;version=Hapmap2;RS=rs276637755;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	25846038	25846137	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:24407136;1allele=C/T;version=Hapmap2;RS=rs810408234;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	25888575	25888674	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:24450220;1allele=A/G;version=Hapmap2;RS=rs276637788;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	25986025	25986124	.	+	.	Name=Ear_height;B73v2_pos=2:24532476;1allele=T/A;version=Hapmap2;RS=rs816226176;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	26001308	26001407	.	+	.	Name=Ear_height;B73v2_pos=2:24552043;1allele=T/G;version=Hapmap2;RS=rs842751578;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	26007104	26007203	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:24537047;1allele=G/A;version=Hapmap2;RS=rs817866824;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	26016246	26016345	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:24560681;1allele=C/T;version=Hapmap2;RS=rs869405018;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	26016246	26016345	.	+	.	Name=Ear_height;B73v2_pos=2:24560681;1allele=C/T;version=Hapmap2;RS=rs869405018;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	26019915	26020014	.	+	.	Name=Starch;B73v2_pos=2:24557012;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	26036600	26036699	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:24582774;1allele=G/A;version=Hapmap2;RS=rs1063729818;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	26036955	26037054	.	+	.	Name=Sucrose;B73v2_pos=2:24583129;1allele=G/A;version=Hapmap2;RS=rs816197386;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	26036987	26037086	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:24583161;1allele=T/C;version=Hapmap2;RS=rs805303891;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	26043981	26044080	.	+	.	Name=Ear_row_number;B73v2_pos=2:24590155;1allele=C/T;version=Hapmap2;RS=rs1062577760;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	26044181	26044280	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:24590355;1allele=C/T;version=Hapmap2;RS=rs1064646467;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	26070478	26070577	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:24616540;1allele=C/T;version=Hapmap2;RS=rs1063959251;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	26121601	26121700	.	+	.	Name=Glucose;B73v2_pos=2:24633399;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	26193176	26193275	.	+	.	Name=Ear_row_number;B73v2_pos=2:24734709;1allele=T/C;version=Hapmap2;RS=rs276638077;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	26193748	26193847	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:24735281;1allele=C/A;version=Hapmap1;RS=rs131322457;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	26194299	26194398	.	+	.	Name=Starch;B73v2_pos=2:24735832;1allele=C/T;version=Hapmap2;RS=rs276638078;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	26194588	26194687	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:24736121;1allele=A/G;version=Hapmap1;RS=rs131322471;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	26269814	26269913	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:24811358;1allele=C/T;version=Hapmap2;RS=rs129034147;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	26295530	26295629	.	+	.	Name=Glucose;B73v2_pos=2:24837072;1allele=G/C;version=Hapmap2;RS=rs820155908;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	26323588	26323687	.	+	.	Name=Leaf_width;B73v2_pos=2:24865132;1allele=A/G;version=Hapmap2;RS=rs835460689;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	26330284	26330383	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:24871828;1allele=C/T;version=Hapmap2;RS=rs129034212;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	26332843	26332942	.	+	.	Name=Starch;B73v2_pos=2:24874387;1allele=A/C;version=Hapmap1;RS=rs129034234;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	26333247	26333346	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:24874791;1allele=C/T;version=Hapmap2;RS=rs129034241;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	26525916	26526015	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:25057487;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27173464	27173563	.	+	.	Name=Glucose;B73v2_pos=2:25650990;1allele=T/C;version=Hapmap2;RS=rs129035034;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	27289809	27289908	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:25770272;1allele=T/C;version=Hapmap2;RS=rs850067467;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	27289809	27289908	.	+	.	Name=Days_to_silk;B73v2_pos=2:25770272;1allele=T/C;version=Hapmap2;RS=rs850067467;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	27319551	27319650	.	+	.	Name=Ear_row_number;B73v2_pos=2:25799191;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27396801	27396900	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:25875692;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27402624	27402723	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:25881516;1allele=A/G;version=Hapmap2;RS=rs809555370;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	27414232	27414331	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:25893128;1allele=C/T;version=Hapmap2;RS=rs833837191;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	27444858	27444957	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:25924611;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27507250	27507349	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:25990312;1allele=A/G;version=Hapmap2;RS=rs829935147;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	27514199	27514298	.	+	.	Name=Sucrose;B73v2_pos=2:25997261;1allele=T/C;version=Hapmap2;RS=rs805735152;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	27517755	27517854	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26000817;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27558567	27558666	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26023357;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27580734	27580833	.	+	.	Name=Ear_row_number;B73v2_pos=2:26087742;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27657333	27657432	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26140558;1allele=T/C;version=Hapmap2;RS=rs276639311;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	27657469	27657568	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26140694;1allele=A/T;version=Hapmap2;RS=rs276639312;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	27737044	27737143	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26221298;1allele=A/G;version=Hapmap2;RS=rs129035437;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	27738356	27738455	.	+	.	Name=Malate;B73v2_pos=2:26222610;1allele=C/T;version=Hapmap2;RS=rs845763282;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	27775443	27775542	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:26282840;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27786211	27786310	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:26272071;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27791103	27791202	.	+	.	Name=Starch;B73v2_pos=2:26267179;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27793332	27793431	.	+	.	Name=Leaf_length;B73v2_pos=2:26264950;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27794826	27794925	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26263456;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	27880317	27880416	.	+	.	Name=Ear_height;B73v2_pos=2:26362670;1allele=G/C;version=Hapmap2;RS=rs807307427;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	27947051	27947150	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:26430032;1allele=T/C;version=Hapmap2;RS=rs819202324;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	28006639	28006738	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26564844;1allele=A/C;version=Hapmap2;RS=rs843757355;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	28077699	28077798	.	+	.	Name=Leaf_length;B73v2_pos=2:26507591;1allele=T/A;version=Hapmap2;RS=rs828064970;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	28096200	28096299	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:26581107;1allele=A/G;version=Hapmap2;RS=rs276639720;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	28115447	28115546	.	+	.	Name=Malate;B73v2_pos=2:26606579;1allele=A/T;version=Hapmap2;RS=rs276639746;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	28127907	28128006	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:26619039;1allele=T/C;version=Hapmap2;RS=rs848309836;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	28127912	28128011	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:26619044;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	28161128	28161227	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:26652277;1allele=C/T;version=Hapmap2;RS=rs276639831;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	28199711	28199810	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:26699713;1allele=A/T;version=Hapmap2;RS=rs129035842;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	28220041	28220140	.	+	.	Name=Sucrose;B73v2_pos=2:26720044;1allele=/GCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	28220041	28220140	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:26720044;1allele=/GCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	28221274	28221373	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26721181;1allele=C/A;version=Hapmap2;RS=rs806575750;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	28222716	28222815	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26722623;1allele=G/A;version=Hapmap2;RS=rs131323444;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	28222720	28222819	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26722627;1allele=T/A;version=Hapmap2;RS=rs131323445;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	28223233	28223332	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:26723140;1allele=A/G;version=Hapmap2;RS=rs129035906;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	28224246	28224345	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:26724153;1allele=C/G;version=Hapmap2;RS=rs129035910;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	28283389	28283488	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:26769513;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	28292234	28292333	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:26778358;1allele=G/A;version=Hapmap2;RS=rs819373254;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	28371993	28372092	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:26867211;1allele=G/A;version=Hapmap2;RS=rs131323641;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	28380161	28380260	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:26875469;1allele=C/A;version=Hapmap1;RS=rs131323700;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	28386027	28386126	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:26881335;1allele=G/A;version=Hapmap2;RS=rs131323708;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	28408949	28409048	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:26904263;1allele=C/T;version=Hapmap2;RS=rs844105930;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	28490945	28491044	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:118387416;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	28784579	28784678	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:27282371;1allele=T/C;version=Hapmap2;RS=rs845053657;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	28878922	28879021	.	+	.	Name=Ear_row_number;B73v2_pos=2:27374935;1allele=T/C;version=Hapmap2;RS=rs129036597;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	28945827	28945926	.	+	.	Name=Ear_row_number;B73v2_pos=2:27434322;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29064867	29064966	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:27549389;1allele=A/C;version=Hapmap1;RS=rs131324239;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	29097256	29097355	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:27581771;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29097699	29097798	.	+	.	Name=Stalk_strength;B73v2_pos=2:27582214;1allele=C/A;version=Hapmap2;RS=rs276640539;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	29243509	29243608	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:27737876;1allele=T/A;version=Hapmap2;RS=rs818638130;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	29334370	29334469	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:27827167;1allele=A/G;version=Hapmap2;RS=rs276640669;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	29335105	29335204	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:27827903;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29339671	29339770	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:27832469;1allele=A/C;version=Hapmap1;RS=rs131324797;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	29364934	29365033	.	+	.	Name=Ear_row_number;B73v2_pos=2:27860214;1allele=G/T;version=Hapmap2;RS=rs843431633;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	29366702	29366801	.	+	.	Name=Fumarate;B73v2_pos=2:27861982;1allele=A/G;version=Hapmap2;RS=rs829297705;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	29366788	29366887	.	+	.	Name=Days_to_silk;B73v2_pos=2:27862068;1allele=A/G;version=Hapmap2;RS=rs802821884;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	29366788	29366887	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:27862068;1allele=A/G;version=Hapmap2;RS=rs802821884;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	29372774	29372873	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:27868054;1allele=C/A;version=Hapmap2;RS=rs726479257;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	29376419	29376518	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:27871699;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29377368	29377467	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:27872648;1allele=G/T;version=Hapmap2;RS=rs725156438;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	29377537	29377636	.	+	.	Name=Ear_row_number;B73v2_pos=2:27872817;1allele=G/A;version=Hapmap2;RS=rs724209858;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	29381157	29381256	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:27876437;1allele=A/G;version=Hapmap2;RS=rs726454180;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	29381525	29381624	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:27876805;1allele=G/T;version=Hapmap2;RS=rs827862196;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	29393752	29393851	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:27889032;1allele=C/T;version=Hapmap2;RS=rs835140996;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	29393752	29393851	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:27889032;1allele=C/T;version=Hapmap2;RS=rs835140996;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	29430731	29430830	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:27927241;1allele=G/A;version=Hapmap2;RS=rs850101037;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	29430731	29430830	.	+	.	Name=Days_to_silk;B73v2_pos=2:27927241;1allele=G/A;version=Hapmap2;RS=rs850101037;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	29453149	29453248	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:27950689;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29454639	29454738	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:27952179;1allele=G/T;version=Hapmap2;RS=rs131324888;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	29462554	29462653	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:27960094;1allele=G/C;version=Hapmap2;RS=rs131324987;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	29496126	29496225	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:27994794;1allele=C/T;version=Hapmap2;RS=rs816419963;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	29496955	29497054	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:27995623;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29500637	29500736	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:27999241;1allele=A/T;version=Hapmap2;RS=rs819092374;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	29500637	29500736	.	+	.	Name=Days_to_silk;B73v2_pos=2:27999241;1allele=A/T;version=Hapmap2;RS=rs819092374;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	29500694	29500793	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:27999298;1allele=C/T;version=Hapmap2;RS=rs131325058;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	29501149	29501248	.	+	.	Name=Stalk_strength;B73v2_pos=2:27999753;1allele=A/G;version=Hapmap2;RS=rs131325077;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	29503191	29503290	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:28001795;1allele=C/T;version=Hapmap2;RS=rs808651623;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	29565026	29565125	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:28049838;1allele=C/T;version=Hapmap1;RS=rs131325344;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	29566379	29566478	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:28051191;1allele=C/T;version=Hapmap2;RS=rs131325362;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	29567852	29567951	.	+	.	Name=Ear_height;B73v2_pos=2:28052664;1allele=G/A;version=Hapmap2;RS=rs829539759;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	29691526	29691625	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28179439;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29711701	29711800	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28199615;1allele=C/A;version=Hapmap1;RS=rs131325547;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	29712542	29712641	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28200456;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29748259	29748358	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28276371;1allele=T/C;version=Hapmap2;RS=rs834809756;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	29818781	29818880	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28301714;1allele=C/T;version=Hapmap2;RS=rs819320157;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	29823702	29823801	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28306635;1allele=A/G;version=Hapmap2;RS=rs1063866826;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	29830466	29830565	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28313268;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	29831131	29831230	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:28313933;1allele=A/G;version=Hapmap2;RS=rs803755962;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	29831242	29831341	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:28314044;1allele=T/C;version=Hapmap2;RS=rs838221795;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	29832364	29832463	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:28315162;1allele=C/T;version=Hapmap2;RS=rs1061590606;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	29880271	29880370	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28377377;1allele=C/G;version=Hapmap2;RS=rs1064447806;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	29896033	29896132	.	+	.	Name=Stalk_strength;B73v2_pos=2:28393144;1allele=G/A;version=Hapmap2;RS=rs847780169;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	29896975	29897074	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28394086;1allele=C/G;version=Hapmap2;RS=rs276642104;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	29918846	29918945	.	+	.	Name=Ear_height;B73v2_pos=2:28414941;1allele=C/T;version=Hapmap2;RS=rs129037610;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	29944550	29944649	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:28483819;1allele=T/C;version=Hapmap2;RS=rs817505602;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	29960664	29960762	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28468316;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	30064787	30064886	.	+	.	Name=Stalk_strength;B73v2_pos=2:28559318;1allele=C/T;version=Hapmap2;RS=rs839090275;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30131081	30131180	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28642698;1allele=G/T;version=Hapmap2;RS=rs129037726;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	30134900	30134999	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28646517;1allele=C/A;version=Hapmap1;RS=rs131325861;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30135341	30135440	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:28646958;1allele=T/C;version=Hapmap2;RS=rs845375836;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	30135719	30135818	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:28647336;1allele=A/T;version=Hapmap1;RS=rs131325884;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	30139205	30139304	.	+	.	Name=Sucrose;B73v2_pos=2:28650822;1allele=G/A;version=Hapmap2;RS=rs826738192;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30140219	30140318	.	+	.	Name=Sucrose;B73v2_pos=2:28651836;1allele=A/G;version=Hapmap2;RS=rs131325935;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30150716	30150815	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28662333;1allele=A/G;version=Hapmap2;RS=rs811902780;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30150778	30150877	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28662395;1allele=G/A;version=Hapmap2;RS=rs815117098;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30151036	30151135	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28662653;1allele=G/T;version=Hapmap2;RS=rs129037835;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	30151531	30151630	.	+	.	Name=Sucrose;B73v2_pos=2:28663148;1allele=G/A;version=Hapmap2;RS=rs129037845;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30152818	30152917	.	+	.	Name=Sucrose;B73v2_pos=2:28664435;1allele=C/G;version=Hapmap2;RS=rs129037860;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	30159814	30159913	.	+	.	Name=Sucrose;B73v2_pos=2:28671431;1allele=G/A;version=Hapmap2;RS=rs129037868;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	30159854	30159953	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28671471;1allele=G/A;version=Hapmap2;RS=rs276642532;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30162319	30162418	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:28673936;1allele=A/G;version=Hapmap2;RS=rs129037887;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30163197	30163296	.	+	.	Name=Ear_height;B73v2_pos=2:28674814;1allele=T/C;version=Hapmap2;RS=rs817417508;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	30167295	30167394	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28678912;1allele=G/T;version=Hapmap2;RS=rs727254059;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	30170354	30170453	.	+	.	Name=Cob_diameter;B73v2_pos=2:28681296;1allele=G/A;version=Hapmap2;RS=rs129038001;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30173626	30173725	.	+	.	Name=Stalk_strength;B73v2_pos=2:28685642;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	30203300	30203399	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:28700666;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	30223956	30224055	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28721394;1allele=T/A;version=Hapmap2;RS=rs808787221;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	30227663	30227762	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28725101;1allele=G/A;version=Hapmap2;RS=rs846154570;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30248317	30248416	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:28754676;1allele=C/T;version=Hapmap2;RS=rs131326141;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30254084	30254183	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28761277;1allele=T/G;version=Hapmap1;RS=rs131326144;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	30353211	30353310	.	+	.	Name=Cob_diameter;B73v2_pos=2:28862774;1allele=G/A;version=Hapmap2;RS=rs129038126;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30358179	30358278	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28867742;1allele=G/A;version=Hapmap2;RS=rs825200259;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	30359445	30359544	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:28869008;1allele=C/T;version=Hapmap2;RS=rs841814265;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30361285	30361384	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28870848;1allele=A/T;version=Hapmap2;RS=rs814220443;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	30361855	30361954	.	+	.	Name=Glutamate;B73v2_pos=2:28871418;1allele=A/G;version=Hapmap2;RS=rs833269134;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30362575	30362674	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:28872138;1allele=G/A;version=Hapmap1;RS=rs129038153;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30389755	30389854	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:28899939;1allele=G/A;version=Hapmap2;RS=rs831132231;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30421326	30421425	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:28932586;1allele=A/G;version=Hapmap2;RS=rs276643224;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30421723	30421822	.	+	.	Name=Total_amino_acids;B73v2_pos=2:28932983;1allele=C/G;version=Hapmap1;RS=rs129038276;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	30421745	30421844	.	+	.	Name=Total_amino_acids;B73v2_pos=2:28933005;1allele=G/T;version=Hapmap1;RS=rs131326277;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	30424285	30424384	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:28935545;1allele=G/A;version=Hapmap2;RS=rs823642628;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30425480	30425579	.	+	.	Name=Cob_diameter;B73v2_pos=2:28936740;1allele=T/C;version=Hapmap2;RS=rs131326308;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30427586	30427685	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:28938846;1allele=T/C;version=Hapmap2;RS=rs845021901;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	30428160	30428259	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:28939420;1allele=A/G;version=Hapmap2;RS=rs814117728;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30432511	30432610	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:28943771;1allele=C/T;version=Hapmap2;RS=rs726262010;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30459173	30459272	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28970597;1allele=T/C;version=Hapmap2;RS=rs1061186774;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30541561	30541660	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:29054994;1allele=A/G;version=Hapmap1;RS=rs131326400;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30542458	30542557	.	+	.	Name=Glutamate;B73v2_pos=2:29055891;1allele=G/A;version=Hapmap1;RS=rs131326417;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	30547296	30547395	.	+	.	Name=Stalk_strength;B73v2_pos=2:29060729;1allele=C/T;version=Hapmap2;RS=rs834978324;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30596094	30596193	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:29076316;1allele=G/A;version=Hapmap2;RS=rs815800164;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	30598918	30599017	.	+	.	Name=Stalk_strength;B73v2_pos=2:29079140;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	30628425	30628524	.	+	.	Name=Cob_diameter;B73v2_pos=2:29109899;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	30750550	30750649	.	+	.	Name=Cob_diameter;B73v2_pos=2:29232052;1allele=C/T;version=Hapmap2;RS=rs276643924;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	30752254	30752353	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:29233756;1allele=A/G;version=Hapmap2;RS=rs820169188;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30787608	30787707	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:29261428;1allele=G/T;version=Hapmap1;RS=rs726260426;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	30789926	30790025	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:29263746;1allele=A/G;version=Hapmap2;RS=rs129038909;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	30792192	30792291	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29266012;1allele=C/A;version=Hapmap2;RS=rs276644021;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	30844217	30844316	.	+	.	Name=Cob_diameter;B73v2_pos=2:29334473;1allele=A/G;version=Hapmap2;RS=rs844548427;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	30844474	30844573	.	+	.	Name=Cob_diameter;B73v2_pos=2:29334216;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	30877252	30877351	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:29404904;1allele=G/A;version=Hapmap2;RS=rs809981621;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	31035257	31035356	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:29520346;1allele=T/A;version=Hapmap2;RS=rs1062463936;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	31041665	31041764	.	+	.	Name=Cob_diameter;B73v2_pos=2:29526753;1allele=T/G;version=Hapmap1;RS=rs869563309;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	31121854	31121952	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29599848;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31122258	31122357	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:29600253;1allele=C/A;version=Hapmap2;RS=rs129039235;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	31144348	31144447	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29606446;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31144396	31144495	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29606398;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31147703	31147802	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:29602807;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31186140	31186239	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:29672474;1allele=G/T;version=Hapmap1;RS=rs129039309;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	31193458	31193557	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:29679792;1allele=A/T;version=Hapmap2;RS=rs129039335;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	31362684	31362783	.	+	.	Name=Stalk_strength;B73v2_pos=2:29865978;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31460631	31460730	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29944443;1allele=G/T;version=Hapmap2;RS=rs276644723;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	31462734	31462833	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:29946546;1allele=G/A;version=Hapmap2;RS=rs129039608;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	31464714	31464813	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29948527;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31486359	31486458	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29970049;1allele=G/A;version=Hapmap2;RS=rs839279039;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	31487095	31487194	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29970785;1allele=C/T;version=Hapmap2;RS=rs824093192;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	31529706	31529805	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:30041760;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31570336	31570435	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:30001127;1allele=+/-;version=Hapmap2;RS=rs822422222;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	31581637	31581736	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:29989826;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31678924	31679023	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:30134216;1allele=A/T;version=Hapmap2;RS=rs810485667;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	31779013	31779112	.	+	.	Name=Days_to_silk;B73v2_pos=2:30233978;1allele=G/T;version=Hapmap2;RS=rs129039721;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	31780423	31780522	.	+	.	Name=Total_amino_acids;B73v2_pos=2:30235388;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31814904	31815003	.	+	.	Name=Total_amino_acids;B73v2_pos=2:30358091;1allele=A/C;version=Hapmap2;RS=rs129040037;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	31815089	31815188	.	+	.	Name=Total_amino_acids;B73v2_pos=2:30358276;1allele=C/A;version=Hapmap2;RS=rs129040039;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	31815864	31815963	.	+	.	Name=Total_amino_acids;B73v2_pos=2:30359051;1allele=T/A;version=Hapmap2;RS=rs129040046;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	31815970	31816069	.	+	.	Name=Total_amino_acids;B73v2_pos=2:30359157;1allele=T/C;version=Hapmap2;RS=rs836908927;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	31816024	31816123	.	+	.	Name=Total_amino_acids;B73v2_pos=2:30359211;1allele=T/C;version=Hapmap2;RS=rs129040048;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	31816148	31816247	.	+	.	Name=Stalk_strength;B73v2_pos=2:30359335;1allele=G/T;version=Hapmap2;RS=rs828636757;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	31816279	31816378	.	+	.	Name=Stalk_strength;B73v2_pos=2:30359466;1allele=A/G;version=Hapmap2;RS=rs828092448;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	31816988	31817087	.	+	.	Name=Total_amino_acids;B73v2_pos=2:30360175;1allele=A/G;version=Hapmap2;RS=rs806365828;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	31820118	31820217	.	+	.	Name=Cob_diameter;B73v2_pos=2:30363305;1allele=G/A;version=Hapmap2;RS=rs837058309;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	31862877	31862976	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:30331904;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31910177	31910276	.	+	.	Name=Days_to_silk;B73v2_pos=2:30284611;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31913256	31913355	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:30281532;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31917616	31917715	.	+	.	Name=Days_to_silk;B73v2_pos=2:30277172;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	31921574	31921673	.	+	.	Name=Cob_diameter;B73v2_pos=2:30273217;1allele=C/A;version=Hapmap2;RS=rs814472293;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	32105193	32105292	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:30553248;1allele=T/A;version=Hapmap2;RS=rs131327763;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	32105233	32105332	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:30553288;1allele=C/T;version=Hapmap2;RS=rs831373517;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	32105558	32105657	.	+	.	Name=Nitrate;B73v2_pos=2:30553613;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	32138462	32138561	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:30571784;1allele=C/T;version=Hapmap2;RS=rs843170321;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	32507336	32507435	.	+	.	Name=Nitrate;B73v2_pos=2:30900796;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	32526511	32526610	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:30865876;1allele=G/A;version=Hapmap2;RS=rs813289283;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	32526511	32526610	.	+	.	Name=Ear_height;B73v2_pos=2:30865876;1allele=G/A;version=Hapmap2;RS=rs813289283;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	32534051	32534150	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:30873421;1allele=T/C;version=Hapmap2;RS=rs131328101;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	32534095	32534194	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:30873465;1allele=A/T;version=Hapmap1;RS=rs131328097;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	32568415	32568514	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:30999667;1allele=C/T;version=Hapmap2;RS=rs802584173;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	32570092	32570191	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:31001344;1allele=C/T;version=Hapmap2;RS=rs819591205;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	32613317	32613416	.	+	.	Name=Stalk_strength;B73v2_pos=2:31045858;1allele=G/T;version=Hapmap2;RS=rs831644643;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	32669516	32669615	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:31100587;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	32685470	32685569	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:31084629;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	32704734	32704833	.	+	.	Name=Stalk_strength;B73v2_pos=2:31065351;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	32704946	32705045	.	+	.	Name=Stalk_strength;B73v2_pos=2:31065139;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	32783742	32783841	.	+	.	Name=Days_to_silk;B73v2_pos=2:31215023;1allele=T/C;version=Hapmap2;RS=rs832361909;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	32868310	32868409	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:31291365;1allele=A/G;version=Hapmap2;RS=rs806476836;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	33025307	33025406	.	+	.	Name=Days_to_silk;B73v2_pos=2:31460965;1allele=T/C;version=Hapmap2;RS=rs1064112891;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	33109000	33109099	.	+	.	Name=Stalk_strength;B73v2_pos=2:31545890;1allele=G/A;version=Hapmap2;RS=rs808539161;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	33486416	33486515	.	+	.	Name=Ear_height;B73v2_pos=2:31921571;1allele=T/G;version=Hapmap2;RS=rs129041882;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	33487058	33487157	.	+	.	Name=Malate;B73v2_pos=2:31922213;1allele=C/A;version=Hapmap2;RS=rs818435241;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	33508155	33508254	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:31943254;1allele=C/T;version=Hapmap2;RS=rs1062223222;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	33534894	33534993	.	+	.	Name=Cob_diameter;B73v2_pos=2:31969998;1allele=C/T;version=Hapmap2;RS=rs846262787;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	33535460	33535559	.	+	.	Name=Cob_diameter;B73v2_pos=2:31970564;1allele=T/G;version=Hapmap2;RS=rs848980743;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	33537723	33537822	.	+	.	Name=Cob_diameter;B73v2_pos=2:31972827;1allele=T/C;version=Hapmap2;RS=rs820628139;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	33772395	33772494	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:32212433;1allele=G/A;version=Hapmap1;RS=rs131328922;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	33782546	33782645	.	+	.	Name=Days_to_silk;B73v2_pos=2:32222075;1allele=A/G;version=Hapmap2;RS=rs803667587;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	34028803	34028902	.	+	.	Name=Stalk_strength;B73v2_pos=2:32486760;1allele=A/G;version=Hapmap2;RS=rs815318230;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	34035364	34035463	.	+	.	Name=Cob_diameter;B73v2_pos=2:32493321;1allele=G/A;version=Hapmap2;RS=rs131329005;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	34043791	34043890	.	+	.	Name=Sucrose;B73v2_pos=2:32501748;1allele=C/T;version=Hapmap2;RS=rs276647940;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	34044080	34044179	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:32502037;1allele=C/T;version=Hapmap2;RS=rs838434363;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	34048896	34048995	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:32506853;1allele=A/G;version=Hapmap2;RS=rs843493467;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	34052790	34052889	.	+	.	Name=Cob_diameter;B73v2_pos=2:32510747;1allele=T/C;version=Hapmap2;RS=rs832275095;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	34059219	34059318	.	+	.	Name=Cob_diameter;B73v2_pos=2:32517176;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	34059560	34059659	.	+	.	Name=Cob_diameter;B73v2_pos=2:32517517;1allele=C/A;version=Hapmap2;RS=rs131329073;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	34062228	34062327	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:32520185;1allele=C/A;version=Hapmap2;RS=rs131329126;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	34083456	34083555	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:32540421;1allele=C/T;version=Hapmap2;RS=rs850308191;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	34128559	34128658	.	+	.	Name=Days_to_silk;B73v2_pos=2:32583662;1allele=C/T;version=Hapmap2;RS=rs276648267;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	34335080	34335177	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:32790900;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	34445765	34445864	.	+	.	Name=Days_to_silk;B73v2_pos=2:32896026;1allele=A/G;version=Hapmap2;RS=rs276648650;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	34907280	34907379	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:33347441;1allele=G/A;version=Hapmap2;RS=rs725410322;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	34916883	34916982	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:33357043;1allele=A/G;version=Hapmap2;RS=rs276649150;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	34918160	34918259	.	+	.	Name=Glucose;B73v2_pos=2:33358320;1allele=C/T;version=Hapmap2;RS=rs809903333;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	35057326	35057425	.	+	.	Name=Ear_height;B73v2_pos=2:33506900;1allele=T/C;version=Hapmap2;RS=rs129044409;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	35058123	35058222	.	+	.	Name=Glutamate;B73v2_pos=2:33507697;1allele=T/C;version=Hapmap1;RS=rs811865208;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	35085610	35085709	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:33535144;1allele=C/G;version=Hapmap1;RS=rs131330158;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	35266653	35266752	.	+	.	Name=Days_to_silk;B73v2_pos=2:33621470;1allele=T/A;version=Hapmap1;RS=rs830125275;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	35267814	35267913	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:33622631;1allele=G/A;version=Hapmap2;RS=rs807413764;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	35407569	35407668	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:33805077;1allele=G/A;version=Hapmap2;RS=rs814549767;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	35437752	35437851	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:33836981;1allele=A/C;version=Hapmap2;RS=rs842370951;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	35790446	35790545	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:34210177;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	35805155	35805254	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:34225342;1allele=C/T;version=Hapmap2;RS=rs830895857;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	35826370	35826469	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:34246559;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	35926173	35926272	.	+	.	Name=Cob_diameter;B73v2_pos=2:34343216;1allele=A/C;version=Hapmap2;RS=rs276650224;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	35930330	35930429	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:34347373;1allele=C/A;version=Hapmap2;RS=rs129045537;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	36155139	36155238	.	+	.	Name=Days_to_silk;B73v2_pos=2:34572271;1allele=T/G;version=Hapmap2;RS=rs129046091;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	36155478	36155577	.	+	.	Name=Days_to_silk;B73v2_pos=2:34572610;1allele=C/T;version=Hapmap2;RS=rs131330853;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	36160544	36160643	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:34577676;1allele=C/T;version=Hapmap2;RS=rs276650599;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	36161051	36161150	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:34578183;1allele=T/C;version=Hapmap2;RS=rs129046160;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	36804264	36804363	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:35272110;1allele=A/T;version=Hapmap1;RS=rs131331188;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	36852274	36852373	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:35330217;1allele=A/G;version=Hapmap1;RS=rs131331302;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	36852439	36852538	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:35330382;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	37227372	37227471	.	+	.	Name=Nitrate;B73v2_pos=2:35731035;1allele=C/T;version=Hapmap2;RS=rs823775398;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	37826962	37827061	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:36317513;1allele=G/A;version=Hapmap1;RS=rs841817320;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	37838976	37839075	.	+	.	Name=Nitrate;B73v2_pos=2:36329464;1allele=A/G;version=Hapmap1;RS=rs131331740;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	37903825	37903924	.	+	.	Name=Tassel_length;B73v2_pos=2:36393994;1allele=T/G;version=Hapmap2;RS=rs810058956;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	37964329	37964428	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:36452986;1allele=G/T;version=Hapmap2;RS=rs820962779;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	37964330	37964429	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:36452987;1allele=C/T;version=Hapmap2;RS=rs850311443;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	37996347	37996446	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:36485003;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	38042871	38042970	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:36531913;1allele=G/T;version=Hapmap2;RS=rs810444988;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	38100051	38100150	.	+	.	Name=Malate;B73v2_pos=2:36589271;1allele=C/G;version=Hapmap2;RS=rs821005376;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	38104156	38104255	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:36593328;1allele=A/G;version=Hapmap2;RS=rs276651995;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	38223274	38223373	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:36711451;1allele=G/A;version=Hapmap2;RS=rs811842190;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	38281432	38281531	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:36766065;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	38283821	38283920	.	+	.	Name=Glutamate;B73v2_pos=2:36763676;1allele=T/G;version=Hapmap2;RS=rs725253358;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	38345814	38345913	.	+	.	Name=Glutamate;B73v2_pos=2:36825191;1allele=/CT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	38347198	38347297	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:36826575;1allele=G/A;version=Hapmap1;RS=rs131332380;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	38364413	38364512	.	+	.	Name=Ear_height;B73v2_pos=2:36843788;1allele=G/T;version=Hapmap1;RS=rs131332520;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	38427275	38427374	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:36906488;1allele=G/A;version=Hapmap2;RS=rs842751082;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	38447720	38447819	.	+	.	Name=Glutamate;B73v2_pos=2:36926835;1allele=A/G;version=Hapmap2;RS=rs835983040;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	38447761	38447860	.	+	.	Name=Glutamate;B73v2_pos=2:36926876;1allele=C/A;version=Hapmap2;RS=rs835252375;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	38455308	38455407	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:36934423;1allele=C/T;version=Hapmap2;RS=rs1062941022;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	38457423	38457522	.	+	.	Name=Malate;B73v2_pos=2:36936538;1allele=C/G;version=Hapmap1;RS=rs129048415;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	38458959	38459058	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:36938074;1allele=G/A;version=Hapmap2;RS=rs276652503;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	38460567	38460666	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:36939682;1allele=A/G;version=Hapmap2;RS=rs129048430;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	38461575	38461674	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:36940690;1allele=G/A;version=Hapmap1;RS=rs129048437;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	38512982	38513081	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:36990908;1allele=A/G;version=Hapmap2;RS=rs834322368;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	38570075	38570174	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37047180;1allele=C/T;version=Hapmap2;RS=rs813717849;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	38594057	38594156	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37090116;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	38667383	38667482	.	+	.	Name=Cob_diameter;B73v2_pos=2:37099395;1allele=C/G;version=Hapmap2;RS=rs822888096;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	38678349	38678448	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37117337;1allele=G/T;version=Hapmap2;RS=rs276652603;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	38681300	38681399	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:37120288;1allele=G/A;version=Hapmap2;RS=rs129048703;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	38700435	38700534	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:37139403;1allele=C/G;version=Hapmap2;RS=rs1061003250;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	38713325	38713424	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37152293;1allele=T/C;version=Hapmap2;RS=rs826780781;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	38757276	38757375	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37191751;1allele=G/A;version=Hapmap2;RS=rs131333081;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	38759888	38759987	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:37194363;1allele=C/T;version=Hapmap2;RS=rs829985977;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	38805484	38805583	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:37347692;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	38824366	38824465	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:37328806;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	38861281	38861380	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37251339;1allele=G/A;version=Hapmap2;RS=rs845934792;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	38882477	38882576	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:37272541;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	38970297	38970396	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37420070;1allele=C/T;version=Hapmap1;RS=rs129049186;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	38971605	38971704	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37421378;1allele=T/C;version=Hapmap2;RS=rs1061712899;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	39000173	39000272	.	+	.	Name=Leaf_length;B73v2_pos=2:37447573;1allele=T/C;version=Hapmap2;RS=rs819749162;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	39002098	39002197	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:37449498;1allele=G/A;version=Hapmap2;RS=rs837104802;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	39107164	39107263	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:37554965;1allele=C/G;version=Hapmap2;RS=rs807218415;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	39265149	39265248	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:37728603;1allele=A/G;version=Hapmap2;RS=rs822513271;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	39402893	39402992	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:37863219;1allele=G/C;version=Hapmap2;RS=rs1063982174;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	39412433	39412532	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:37873912;1allele=G/T;version=Hapmap2;RS=rs1060955773;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	39681341	39681440	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:38109495;1allele=C/T;version=Hapmap2;RS=rs129050076;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	39713514	39713613	.	+	.	Name=Cob_diameter;B73v2_pos=2:38141671;1allele=C/T;version=Hapmap2;RS=rs276654022;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	39897572	39897671	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:38322804;1allele=C/T;version=Hapmap1;RS=rs131333935;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	39897617	39897716	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:38322849;1allele=C/T;version=Hapmap1;RS=rs131333932;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	40121858	40121957	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:38544651;1allele=A/G;version=Hapmap2;RS=rs1062122710;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	40273404	40273503	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:38696485;1allele=C/T;version=Hapmap1;RS=rs131334176;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	40275601	40275700	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:38698682;1allele=A/T;version=Hapmap2;RS=rs816338137;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	40368412	40368511	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:38755645;1allele=A/G;version=Hapmap2;RS=rs807968501;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	40385379	40385478	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:38796194;1allele=G/A;version=Hapmap2;RS=rs129050812;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	40424042	40424141	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:38837080;1allele=A/C;version=Hapmap2;RS=rs825343320;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	40452829	40452928	.	+	.	Name=Stalk_strength;B73v2_pos=2:38862849;1allele=C/G;version=Hapmap2;RS=rs826907551;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	40461190	40461289	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:38871232;1allele=G/A;version=Hapmap2;RS=rs804343309;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	40520655	40520754	.	+	.	Name=Stalk_strength;B73v2_pos=2:38930316;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	40574942	40575041	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:38985233;1allele=G/A;version=Hapmap1;RS=rs131334373;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	40575682	40575781	.	+	.	Name=Stalk_strength;B73v2_pos=2:38985973;1allele=C/T;version=Hapmap2;RS=rs131334398;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	40594302	40594401	.	+	.	Name=Stalk_strength;B73v2_pos=2:39004593;1allele=A/T;version=Hapmap2;RS=rs829645772;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	40621278	40621377	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:39031568;1allele=A/C;version=Hapmap1;RS=rs131334455;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	40673297	40673396	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:39083588;1allele=C/T;version=Hapmap2;RS=rs844516240;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	40821030	40821129	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:39203624;1allele=T/C;version=Hapmap2;RS=rs804453146;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	40924284	40924383	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:39317678;1allele=C/T;version=Hapmap2;RS=rs129051388;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	40925386	40925485	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:39318780;1allele=C/G;version=Hapmap2;RS=rs276655586;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	41030775	41030874	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:39422028;1allele=G/T;version=Hapmap2;RS=rs804562186;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	41156253	41156352	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:39546819;1allele=C/T;version=Hapmap2;RS=rs129051895;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	41337361	41337460	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:39714461;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	41375730	41375829	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:39752502;1allele=A/C;version=Hapmap2;RS=rs129052266;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	41380943	41381042	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:39757715;1allele=C/G;version=Hapmap1;RS=rs131335013;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	41426671	41426770	.	+	.	Name=Ear_height;B73v2_pos=2:39795614;1allele=A/G;version=Hapmap1;RS=rs131335050;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	41426687	41426786	.	+	.	Name=Ear_height;B73v2_pos=2:39795630;1allele=A/T;version=Hapmap1;RS=rs131335051;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	41445188	41445287	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:39811369;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	41555896	41555995	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:39922106;1allele=A/G;version=Hapmap1;RS=rs131335152;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	41614399	41614498	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:39978740;1allele=A/G;version=Hapmap2;RS=rs1063084708;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	41775884	41775983	.	+	.	Name=Nitrate;B73v2_pos=2:40139810;1allele=T/A;version=Hapmap2;RS=rs847364062;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	41794893	41794992	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:40158819;1allele=C/T;version=Hapmap2;RS=rs276656752;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	42084659	42084758	.	+	.	Name=Malate;B73v2_pos=2:40440372;1allele=T/G;version=Hapmap2;RS=rs821054368;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	42137807	42137906	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:40490814;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	42141967	42142066	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:40494974;1allele=A/G;version=Hapmap2;RS=rs725054629;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	42146239	42146338	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:40499247;1allele=G/A;version=Hapmap2;RS=rs131335765;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	42149573	42149672	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:40502626;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	42722008	42722107	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:40947967;1allele=A/G;version=Hapmap2;RS=rs804666234;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	42809538	42809637	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:40963912;1allele=T/G;version=Hapmap2;RS=rs803362003;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	43013451	43013550	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:41230598;1allele=G/A;version=Hapmap2;RS=rs835850654;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	43182218	43182317	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:41396608;1allele=A/G;version=Hapmap2;RS=rs276658650;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	43197208	43197307	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:41411598;1allele=C/T;version=Hapmap2;RS=rs837241463;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	43269892	43269991	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:41479330;1allele=G/A;version=Hapmap2;RS=rs131336473;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	43298110	43298209	.	+	.	Name=Ear_row_number;B73v2_pos=2:41506846;1allele=A/C;version=Hapmap2;RS=rs276658871;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	43525613	43525712	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:41728132;1allele=A/G;version=Hapmap2;RS=rs276659205;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	43565464	43565563	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:41767984;1allele=T/A;version=Hapmap2;RS=rs839914108;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	43568249	43568348	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:41770769;1allele=G/C;version=Hapmap2;RS=rs129055098;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	43576925	43577024	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:41779447;1allele=G/T;version=Hapmap2;RS=rs724271389;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	43681628	43681727	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:41887512;1allele=T/G;version=Hapmap2;RS=rs129055151;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	43683602	43683701	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:41889486;1allele=T/G;version=Hapmap2;RS=rs815166875;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	43684045	43684144	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:41889929;1allele=C/G;version=Hapmap1;RS=rs131337175;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	43692577	43692676	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:41898461;1allele=T/C;version=Hapmap2;RS=rs837955415;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	43752374	43752473	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:41958158;1allele=G/C;version=Hapmap2;RS=rs131337311;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	43951419	43951518	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:42108115;1allele=G/A;version=Hapmap2;RS=rs129055442;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	43956635	43956734	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:42113331;1allele=G/T;version=Hapmap2;RS=rs129055414;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	44004259	44004358	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:42186996;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	44234111	44234210	.	+	.	Name=Tassel_length;B73v2_pos=2:42419837;1allele=T/C;version=Hapmap2;RS=rs276660411;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	44795834	44795933	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:42990216;1allele=G/A;version=Hapmap2;RS=rs829969088;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	44894304	44894403	.	+	.	Name=Ear_height;B73v2_pos=2:43086197;1allele=G/C;version=Hapmap2;RS=rs824921729;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	44985484	44985583	.	+	.	Name=Plant_height;B73v2_pos=2:43175167;1allele=C/T;version=Hapmap2;RS=rs805423392;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	44987370	44987469	.	+	.	Name=Leaf_width;B73v2_pos=2:43177053;1allele=A/T;version=Hapmap2;RS=rs827238351;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	45161856	45161955	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:43339957;1allele=C/G;version=Hapmap2;RS=rs824552107;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	45174625	45174724	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:43352728;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	45177090	45177189	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:43355193;1allele=C/G;version=Hapmap2;RS=rs843536952;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	45240327	45240426	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:43428626;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	45351624	45351723	.	+	.	Name=Days_to_silk;B73v2_pos=2:43523290;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	45384828	45384927	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:43557354;1allele=C/A;version=Hapmap2;RS=rs812098783;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	45414497	45414596	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:43602643;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	45470369	45470468	.	+	.	Name=Ear_height;B73v2_pos=2:43659415;1allele=G/C;version=Hapmap2;RS=rs847259564;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	45502775	45502874	.	+	.	Name=Plant_height;B73v2_pos=2:43704849;1allele=A/C;version=Hapmap2;RS=rs847418290;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	45521955	45522054	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:43699112;1allele=G/A;version=Hapmap2;RS=rs276662097;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	45548735	45548834	.	+	.	Name=Malate;B73v2_pos=2:43737696;1allele=C/T;version=Hapmap2;RS=rs803914781;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	45840790	45840889	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:44040872;1allele=G/A;version=Hapmap1;RS=rs129057663;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	45971608	45971707	.	+	.	Name=Days_to_silk;B73v2_pos=2:44169839;1allele=+/-;version=Hapmap2;RS=rs821361944;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	45998744	45998843	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:44196453;1allele=A/G;version=Hapmap2;RS=rs129057990;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	46061134	46061233	.	+	.	Name=Stalk_strength;B73v2_pos=2:44258324;1allele=T/A;version=Hapmap2;RS=rs832159423;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	46108067	46108166	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:44305570;1allele=A/G;version=Hapmap2;RS=rs724287989;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	46133628	46133727	.	+	.	Name=Days_to_silk;B73v2_pos=2:44331424;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	46134997	46135096	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:44332794;1allele=/GCCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	46164503	46164602	.	+	.	Name=Ear_height;B73v2_pos=2:44362300;1allele=C/G;version=Hapmap2;RS=rs810858383;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	46192928	46193027	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:44391886;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	46193923	46194022	.	+	.	Name=Days_to_silk;B73v2_pos=2:44392881;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	46235769	46235868	.	+	.	Name=Days_to_silk;B73v2_pos=2:44434696;1allele=C/T;version=Hapmap2;RS=rs846496244;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	46236274	46236373	.	+	.	Name=Days_to_silk;B73v2_pos=2:44435201;1allele=A/G;version=Hapmap2;RS=rs131339866;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	46264866	46264965	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:44461128;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	46801591	46801690	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:45006202;1allele=C/T;version=Hapmap2;RS=rs833081615;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	47342535	47342634	.	+	.	Name=Days_to_silk;B73v2_pos=2:45526473;1allele=G/T;version=Hapmap1;RS=rs131340705;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	47408660	47408759	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:45592754;1allele=T/C;version=Hapmap2;RS=rs129059532;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	47409151	47409250	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:45594571;1allele=A/C;version=Hapmap2;RS=rs806640406;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	47535409	47535508	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:45718960;1allele=C/T;version=Hapmap2;RS=rs129059782;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	47595258	47595357	.	+	.	Name=Leaf_width;B73v2_pos=2:45778816;1allele=C/T;version=Hapmap1;RS=rs131340890;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	47703127	47703226	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:45891859;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	47703717	47703816	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:45892449;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	47703755	47703854	.	+	.	Name=Ear_row_number;B73v2_pos=2:45892487;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	47782205	47782304	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:45970945;1allele=T/C;version=Hapmap2;RS=rs831411753;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	48470945	48471044	.	+	.	Name=Plant_height;B73v2_pos=2:46588579;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	48527925	48528024	.	+	.	Name=Tassel_length;B73v2_pos=2:46656103;1allele=G/A;version=Hapmap2;RS=rs829226716;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	48544192	48544291	.	+	.	Name=Plant_height;B73v2_pos=2:46672370;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	48553804	48553903	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:46681982;1allele=T/G;version=Hapmap2;RS=rs1061473069;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	48604620	48604719	.	+	.	Name=Days_to_silk;B73v2_pos=2:46733378;1allele=C/T;version=Hapmap2;RS=rs838949094;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	48796113	48796212	.	+	.	Name=Ear_row_number;B73v2_pos=2:46920164;1allele=G/A;version=Hapmap2;RS=rs824182653;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	48893707	48893806	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:47017018;1allele=T/C;version=Hapmap2;RS=rs129061566;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	49153151	49153250	.	+	.	Name=Tassel_length;B73v2_pos=2:47274723;1allele=T/A;version=Hapmap2;RS=rs813668962;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	49153187	49153286	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:47274759;1allele=C/T;version=Hapmap2;RS=rs841352859;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	49442052	49442151	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:47560368;1allele=A/C;version=Hapmap2;RS=rs806601651;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	49565028	49565127	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:47652252;1allele=C/G;version=Hapmap2;RS=rs843050712;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	50207846	50207945	.	+	.	Name=Tassel_length;B73v2_pos=2:48281291;1allele=G/T;version=Hapmap2;RS=rs843789464;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	50322492	50322591	.	+	.	Name=Ear_height;B73v2_pos=2:48397879;1allele=C/T;version=Hapmap2;RS=rs808054454;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	50332758	50332857	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:48408146;1allele=G/A;version=Hapmap2;RS=rs826595539;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	50381456	50381555	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:48416590;1allele=T/A;version=Hapmap1;RS=rs131342897;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	50382592	50382691	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:48417726;1allele=/GGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	50525907	50526006	.	+	.	Name=Stalk_strength;B73v2_pos=2:48582796;1allele=G/A;version=Hapmap2;RS=rs820373893;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	50536694	50536793	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:48593583;1allele=T/C;version=Hapmap2;RS=rs129063895;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	50787694	50787793	.	+	.	Name=Ear_row_number;B73v2_pos=2:48823247;1allele=T/G;version=Hapmap2;RS=rs131343284;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	50861963	50862062	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:48884513;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	50864929	50865028	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:48881547;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	50866701	50866800	.	+	.	Name=Stalk_strength;B73v2_pos=2:48879775;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	51019664	51019763	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:49057867;1allele=C/T;version=Hapmap1;RS=rs131343430;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	51021046	51021145	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:49059249;1allele=C/T;version=Hapmap2;RS=rs846557081;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	51021881	51021980	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:49060084;1allele=T/G;version=Hapmap2;RS=rs845510263;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	51053687	51053786	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:49091888;1allele=G/A;version=Hapmap2;RS=rs725058622;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	51072468	51072567	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:49110668;1allele=G/A;version=Hapmap2;RS=rs842826253;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	51982599	51982698	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:50045771;1allele=C/T;version=Hapmap2;RS=rs802643083;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	52132458	52132557	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:50217407;1allele=G/A;version=Hapmap2;RS=rs828971284;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	52211219	52211317	.	+	.	Name=Ear_row_number;B73v2_pos=2:50289298;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	52293531	52293630	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:50370048;1allele=G/A;version=Hapmap2;RS=rs803397743;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	52514997	52515096	.	+	.	Name=Ear_row_number;B73v2_pos=2:50605887;1allele=C/T;version=Hapmap2;RS=rs1064079682;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	52595799	52595898	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:50674683;1allele=G/T;version=Hapmap2;RS=rs830133331;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	52659643	52659742	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:50743141;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	53066863	53066962	.	+	.	Name=Tassel_length;B73v2_pos=2:51127290;1allele=A/C;version=Hapmap2;RS=rs276671834;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	53179319	53179418	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:51236997;1allele=T/C;version=Hapmap2;RS=rs836292008;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	53486526	53486625	.	+	.	Name=Ear_row_number;B73v2_pos=2:51549056;1allele=A/G;version=Hapmap2;RS=rs809290893;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	53486845	53486944	.	+	.	Name=Ear_row_number;B73v2_pos=2:51549375;1allele=A/G;version=Hapmap2;RS=rs813978216;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	53692204	53692303	.	+	.	Name=Tassel_length;B73v2_pos=2:51754704;1allele=A/T;version=Hapmap2;RS=rs131344974;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	53747657	53747756	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:51807332;1allele=T/C;version=Hapmap2;RS=rs129066695;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	53750352	53750451	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:51810027;1allele=C/T;version=Hapmap2;RS=rs836353587;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	53753016	53753115	.	+	.	Name=Leaf_width;B73v2_pos=2:51812691;1allele=G/A;version=Hapmap2;RS=rs815798890;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	53753950	53754049	.	+	.	Name=Leaf_width;B73v2_pos=2:51813625;1allele=G/A;version=Hapmap1;RS=rs131345019;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	53952764	53952863	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:52022934;1allele=C/T;version=Hapmap2;RS=rs843535972;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	54165584	54165683	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:52234525;1allele=G/A;version=Hapmap2;RS=rs835030667;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	54199438	54199537	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:52282426;1allele=G/A;version=Hapmap2;RS=rs823502683;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	54259397	54259496	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:52306455;1allele=T/C;version=Hapmap2;RS=rs824399250;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	54349600	54349699	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:52431078;1allele=A/C;version=Hapmap2;RS=rs129067518;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	54469440	54469539	.	+	.	Name=Tassel_length;B73v2_pos=2:52550654;1allele=G/A;version=Hapmap2;RS=rs847983004;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	54490988	54491087	.	+	.	Name=Leaf_width;B73v2_pos=2:52560677;1allele=T/G;version=Hapmap2;RS=rs826801290;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	54508169	54508268	.	+	.	Name=Tassel_length;B73v2_pos=2:52587366;1allele=T/A;version=Hapmap2;RS=rs806887078;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	54509097	54509196	.	+	.	Name=Leaf_width;B73v2_pos=2:52588294;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	54514101	54514200	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:52593536;1allele=G/T;version=Hapmap2;RS=rs803395119;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	54524054	54524153	.	+	.	Name=Leaf_width;B73v2_pos=2:52603489;1allele=G/A;version=Hapmap2;RS=rs831339354;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	54545900	54545999	.	+	.	Name=Tassel_length;B73v2_pos=2:52625249;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	54612358	54612457	.	+	.	Name=Days_to_silk;B73v2_pos=2:52702583;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	54671039	54671138	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:52745975;1allele=T/A;version=Hapmap2;RS=rs834447016;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	54812002	54812101	.	+	.	Name=Malate;B73v2_pos=2:52877434;1allele=T/C;version=Hapmap2;RS=rs129068283;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	54956080	54956179	.	+	.	Name=Malate;B73v2_pos=2:53018251;1allele=T/C;version=Hapmap2;RS=rs129068565;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	54980034	54980133	.	+	.	Name=Tassel_length;B73v2_pos=2:53043707;1allele=G/C;version=Hapmap2;RS=rs823883683;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	54998826	54998925	.	+	.	Name=Malate;B73v2_pos=2:53062622;1allele=T/C;version=Hapmap2;RS=rs129068675;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	55039408	55039507	.	+	.	Name=Malate;B73v2_pos=2:53102149;1allele=T/G;version=Hapmap2;RS=rs276675376;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	55041384	55041483	.	+	.	Name=Ear_row_number;B73v2_pos=2:53104125;1allele=A/G;version=Hapmap2;RS=rs844721829;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	55260870	55260969	.	+	.	Name=Tassel_length;B73v2_pos=2:53324558;1allele=T/C;version=Hapmap2;RS=rs276675547;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	55304020	55304119	.	+	.	Name=Days_to_silk;B73v2_pos=2:53367714;1allele=T/G;version=Hapmap2;RS=rs129069104;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	55347916	55348015	.	+	.	Name=Malate;B73v2_pos=2:53411632;1allele=G/A;version=Hapmap2;RS=rs829491783;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	55402548	55402647	.	+	.	Name=Malate;B73v2_pos=2:53459117;1allele=T/C;version=Hapmap2;RS=rs846537685;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	55526784	55526883	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:53572979;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	55585605	55585704	.	+	.	Name=Leaf_width;B73v2_pos=2:53631458;1allele=C/G;version=Hapmap2;RS=rs1064402811;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	55723962	55724061	.	+	.	Name=Tassel_length;B73v2_pos=2:53769933;1allele=A/G;version=Hapmap2;RS=rs832243033;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	55755332	55755431	.	+	.	Name=Leaf_width;B73v2_pos=2:53796589;1allele=C/T;version=Hapmap2;RS=rs726185452;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	55757435	55757534	.	+	.	Name=Leaf_width;B73v2_pos=2:53794486;1allele=+/-;version=Hapmap2;RS=rs850269362;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	55761027	55761126	.	+	.	Name=Leaf_width;B73v2_pos=2:53790894;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	55802672	55802771	.	+	.	Name=Leaf_width;B73v2_pos=2:53841868;1allele=G/A;version=Hapmap2;RS=rs840293359;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	55803601	55803700	.	+	.	Name=Leaf_width;B73v2_pos=2:53842797;1allele=T/C;version=Hapmap2;RS=rs807650773;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	56229753	56229852	.	+	.	Name=Malate;B73v2_pos=2:54259543;1allele=G/C;version=Hapmap1;RS=rs131346119;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	56324579	56324678	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:54353931;1allele=G/A;version=Hapmap2;RS=rs843046135;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	56328799	56328898	.	+	.	Name=Ear_row_number;B73v2_pos=2:54358152;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	56449432	56449531	.	+	.	Name=Malate;B73v2_pos=2:54478542;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	56456715	56456814	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:54485825;1allele=C/T;version=Hapmap2;RS=rs802423955;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	56458510	56458609	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:54487620;1allele=T/C;version=Hapmap2;RS=rs823539876;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	56555549	56555648	.	+	.	Name=Leaf_width;B73v2_pos=2:54591312;1allele=A/G;version=Hapmap2;RS=rs836713742;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	56714919	56715018	.	+	.	Name=Tassel_length;B73v2_pos=2:54769629;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	56902675	56902774	.	+	.	Name=Ear_row_number;B73v2_pos=2:54961766;1allele=A/T;version=Hapmap2;RS=rs808400366;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	56903506	56903605	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:54962595;1allele=G/C;version=Hapmap2;RS=rs131346673;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	57265548	57265647	.	+	.	Name=Tassel_length;B73v2_pos=2:55324722;1allele=C/T;version=Hapmap2;RS=rs801935297;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	57265629	57265728	.	+	.	Name=Tassel_length;B73v2_pos=2:55324803;1allele=C/T;version=Hapmap2;RS=rs276678705;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	57420574	57420673	.	+	.	Name=Tassel_length;B73v2_pos=2:55480912;1allele=T/A;version=Hapmap2;RS=rs820834489;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	57421768	57421867	.	+	.	Name=Days_to_silk;B73v2_pos=2:55482106;1allele=C/G;version=Hapmap1;RS=rs131347128;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	57428524	57428623	.	+	.	Name=Tassel_length;B73v2_pos=2:55488560;1allele=C/T;version=Hapmap2;RS=rs835885637;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	57428549	57428648	.	+	.	Name=Tassel_length;B73v2_pos=2:55488585;1allele=C/T;version=Hapmap2;RS=rs848873833;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	57601693	57601792	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:55659942;1allele=T/C;version=Hapmap2;RS=rs804147245;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	57610118	57610217	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:55668367;1allele=A/G;version=Hapmap2;RS=rs839411796;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	57610753	57610852	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:55669002;1allele=A/G;version=Hapmap2;RS=rs276679551;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	57618569	57618668	.	+	.	Name=Days_to_silk;B73v2_pos=2:55676818;1allele=G/T;version=Hapmap2;RS=rs276679592;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	57618730	57618829	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:55676979;1allele=T/C;version=Hapmap1;RS=rs131347445;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	57629892	57629991	.	+	.	Name=Stalk_strength;B73v2_pos=2:55688141;1allele=A/C;version=Hapmap1;RS=rs131347494;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	57630302	57630401	.	+	.	Name=Days_to_silk;B73v2_pos=2:55688551;1allele=A/C;version=Hapmap1;RS=rs131347509;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	57672882	57672981	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:55744563;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	57737041	57737140	.	+	.	Name=Days_to_silk;B73v2_pos=2:55786481;1allele=/GGC;version=Hapmap1;RS=rs830016962;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	57751087	57751186	.	+	.	Name=Tassel_length;B73v2_pos=2:55800591;1allele=C/G;version=Hapmap2;RS=rs131347715;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	57800845	57800944	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:55851245;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	58044423	58044522	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:56064006;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	58063071	58063170	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:56108473;1allele=A/G;version=Hapmap2;RS=rs276680279;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	58063071	58063170	.	+	.	Name=Ear_height;B73v2_pos=2:56108473;1allele=A/G;version=Hapmap2;RS=rs276680279;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	58352387	58352486	.	+	.	Name=Tassel_length;B73v2_pos=2:56440099;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	58384628	58384727	.	+	.	Name=Leaf_width;B73v2_pos=2:56472340;1allele=A/T;version=Hapmap2;RS=rs129071975;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	58823859	58823958	.	+	.	Name=Days_to_silk;B73v2_pos=1:83928729;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	58866537	58866636	.	+	.	Name=Stalk_strength;B73v2_pos=2:56927704;1allele=C/T;version=Hapmap2;RS=rs276680985;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	58908081	58908180	.	+	.	Name=Stalk_strength;B73v2_pos=2:56973517;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	58921593	58921692	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:56986863;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	59310685	59310784	.	+	.	Name=Tassel_length;B73v2_pos=2:57363543;1allele=G/A;version=Hapmap2;RS=rs1060958112;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	59335755	59335854	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:57388795;1allele=A/C;version=Hapmap2;RS=rs839300968;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	59715535	59715634	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:57680871;1allele=A/G;version=Hapmap2;RS=rs1062517689;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	60389725	60389824	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:58373860;1allele=A/C;version=Hapmap2;RS=rs810525957;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	60509121	60509220	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:58492628;1allele=C/T;version=Hapmap2;RS=rs129073868;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	60809542	60809641	.	+	.	Name=Fumarate;B73v2_pos=2:58795555;1allele=G/T;version=Hapmap2;RS=rs844019203;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	60922138	60922237	.	+	.	Name=Fumarate;B73v2_pos=2:58908924;1allele=C/T;version=Hapmap2;RS=rs843317914;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	61032377	61032476	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:59015869;1allele=C/A;version=Hapmap2;RS=rs839967315;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	61160629	61160728	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:59133107;1allele=C/T;version=Hapmap2;RS=rs811069612;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	61350431	61350530	.	+	.	Name=Ear_height;B73v2_pos=2:59323078;1allele=G/A;version=Hapmap2;RS=rs816083326;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	61371937	61372036	.	+	.	Name=Fumarate;B73v2_pos=2:59344575;1allele=A/T;version=Hapmap2;RS=rs842427356;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	61371947	61372046	.	+	.	Name=Fumarate;B73v2_pos=2:59344585;1allele=C/A;version=Hapmap2;RS=rs840141092;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	61406924	61407023	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:59379701;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	61554700	61554799	.	+	.	Name=Ear_height;B73v2_pos=2:59524641;1allele=A/C;version=Hapmap2;RS=rs817820124;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	61676667	61676766	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:59585066;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	61819009	61819108	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:59828713;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	61903281	61903380	.	+	.	Name=Leaf_length;B73v2_pos=2:59871374;1allele=T/C;version=Hapmap2;RS=rs846744112;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	62079717	62079816	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:60043195;1allele=C/T;version=Hapmap2;RS=rs812799295;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	62186511	62186610	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:60149292;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	62468653	62468752	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:60416359;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	62468654	62468753	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:60416360;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	62468674	62468773	.	+	.	Name=Plant_height;B73v2_pos=2:60416380;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	62734998	62735097	.	+	.	Name=Leaf_width;B73v2_pos=2:60682464;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	62844985	62845084	.	+	.	Name=Fumarate;B73v2_pos=2:60792732;1allele=A/G;version=Hapmap2;RS=rs129078659;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	62853126	62853225	.	+	.	Name=Tassel_length;B73v2_pos=2:60800873;1allele=C/G;version=Hapmap2;RS=rs131349900;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	63219926	63220025	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:61198148;1allele=G/T;version=Hapmap2;RS=rs805511564;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	63305913	63306012	.	+	.	Name=Glucose;B73v2_pos=2:61284780;1allele=G/A;version=Hapmap1;RS=rs131350547;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	63534812	63534911	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:61496396;1allele=G/A;version=Hapmap2;RS=rs818964307;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	63893705	63893804	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:61831733;1allele=C/T;version=Hapmap2;RS=rs817699329;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	63932362	63932461	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:61852345;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	63958580	63958679	.	+	.	Name=Leaf_width;B73v2_pos=2:61897715;1allele=T/C;version=Hapmap2;RS=rs726000582;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	64030550	64030649	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:61970896;1allele=C/A;version=Hapmap2;RS=rs829520434;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	64487409	64487508	.	+	.	Name=Tassel_length;B73v2_pos=2:62404592;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	64532240	64532339	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:62464284;1allele=A/G;version=Hapmap2;RS=rs847604736;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	64604302	64604401	.	+	.	Name=Leaf_width;B73v2_pos=2:62536352;1allele=C/T;version=Hapmap2;RS=rs819824557;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	64759708	64759807	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:62686216;1allele=A/T;version=Hapmap2;RS=rs829316024;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	64909374	64909473	.	+	.	Name=Leaf_length;B73v2_pos=2:62829954;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	65289099	65289198	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:63214330;1allele=T/C;version=Hapmap2;RS=rs801732695;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	65289099	65289198	.	+	.	Name=Ear_height;B73v2_pos=2:63214330;1allele=T/C;version=Hapmap2;RS=rs801732695;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	65889138	65889237	.	+	.	Name=Ear_row_number;B73v2_pos=2:63622000;1allele=G/A;version=Hapmap2;RS=rs1064446889;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	66218456	66218555	.	+	.	Name=Ear_row_number;B73v2_pos=2:63941620;1allele=T/G;version=Hapmap2;RS=rs129083053;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	66218798	66218897	.	+	.	Name=Ear_row_number;B73v2_pos=2:63941962;1allele=C/G;version=Hapmap2;RS=rs129083056;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	66218807	66218906	.	+	.	Name=Ear_row_number;B73v2_pos=2:63941971;1allele=T/A;version=Hapmap2;RS=rs129083057;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	66219014	66219113	.	+	.	Name=Ear_row_number;B73v2_pos=2:63942178;1allele=A/C;version=Hapmap1;RS=rs129083059;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	66231131	66231230	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:63954113;1allele=G/A;version=Hapmap2;RS=rs131352080;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	66231231	66231330	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:63954213;1allele=T/A;version=Hapmap2;RS=rs129083142;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	66233970	66234069	.	+	.	Name=Days_to_silk;B73v2_pos=2:63956952;1allele=G/T;version=Hapmap2;RS=rs276692629;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	66290037	66290136	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:64014701;1allele=T/A;version=Hapmap2;RS=rs819649115;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	66619201	66619300	.	+	.	Name=Plant_height;B73v2_pos=2:64366375;1allele=C/T;version=Hapmap2;RS=rs802612796;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	66645078	66645177	.	+	.	Name=Leaf_width;B73v2_pos=2:64319267;1allele=G/A;version=Hapmap2;RS=rs129084267;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	67007573	67007672	.	+	.	Name=Days_to_silk;B73v2_pos=2:64737173;1allele=C/T;version=Hapmap2;RS=rs810849005;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	67007826	67007925	.	+	.	Name=Leaf_width;B73v2_pos=2:64737426;1allele=G/A;version=Hapmap2;RS=rs814920930;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	67007941	67008040	.	+	.	Name=Days_to_silk;B73v2_pos=2:64737541;1allele=C/T;version=Hapmap2;RS=rs826376973;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	67012082	67012181	.	+	.	Name=Leaf_width;B73v2_pos=2:64741682;1allele=T/C;version=Hapmap2;RS=rs129084937;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	67012920	67013019	.	+	.	Name=Leaf_width;B73v2_pos=2:64742520;1allele=C/A;version=Hapmap2;RS=rs831327216;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	67066150	67066249	.	+	.	Name=Leaf_width;B73v2_pos=2:64817485;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	67184716	67184815	.	+	.	Name=Leaf_width;B73v2_pos=2:64925578;1allele=C/T;version=Hapmap2;RS=rs1061145518;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	67187279	67187378	.	+	.	Name=Leaf_width;B73v2_pos=2:64928140;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	67192131	67192230	.	+	.	Name=Leaf_width;B73v2_pos=2:64932992;1allele=A/T;version=Hapmap2;RS=rs129085140;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	67194819	67194918	.	+	.	Name=Leaf_width;B73v2_pos=2:64935684;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	67612966	67613065	.	+	.	Name=Plant_height;B73v2_pos=2:65363001;1allele=T/C;version=Hapmap2;RS=rs845908781;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	67618665	67618764	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:65368699;1allele=C/T;version=Hapmap2;RS=rs831949924;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	67780065	67780164	.	+	.	Name=Ear_row_number;B73v2_pos=2:65513081;1allele=G/A;version=Hapmap1;RS=rs725346708;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	69307366	69307465	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:67021379;1allele=A/G;version=Hapmap2;RS=rs845221635;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	69661588	69661687	.	+	.	Name=Glucose;B73v2_pos=2:67343101;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	69857944	69858043	.	+	.	Name=Ear_row_number;B73v2_pos=2:67589521;1allele=A/T;version=Hapmap2;RS=rs802049061;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	70229334	70229433	.	+	.	Name=Ear_row_number;B73v2_pos=2:67956623;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	70358176	70358275	.	+	.	Name=Ear_row_number;B73v2_pos=2:68085303;1allele=G/A;version=Hapmap2;RS=rs832415063;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	70366917	70367016	.	+	.	Name=Stalk_strength;B73v2_pos=2:68092271;1allele=G/A;version=Hapmap2;RS=rs808472054;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	70488724	70488823	.	+	.	Name=Ear_row_number;B73v2_pos=2:68210854;1allele=G/T;version=Hapmap2;RS=rs843514784;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	70526475	70526574	.	+	.	Name=Leaf_length;B73v2_pos=2:68325941;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	70537904	70538003	.	+	.	Name=Ear_row_number;B73v2_pos=2:68314511;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	71320793	71320892	.	+	.	Name=Ear_row_number;B73v2_pos=2:69046660;1allele=C/A;version=Hapmap1;RS=rs131354235;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	71456728	71456827	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:69181538;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	71872123	71872222	.	+	.	Name=Plant_height;B73v2_pos=2:69563290;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	72068684	72068783	.	+	.	Name=Ear_height;B73v2_pos=2:69762660;1allele=C/T;version=Hapmap2;RS=rs844753431;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	72074965	72075064	.	+	.	Name=Leaf_width;B73v2_pos=2:69768941;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	72141964	72142063	.	+	.	Name=Leaf_width;B73v2_pos=2:69835686;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	72482165	72482264	.	+	.	Name=Leaf_width;B73v2_pos=2:70185638;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	72515849	72515948	.	+	.	Name=Ear_row_number;B73v2_pos=2:70220138;1allele=T/C;version=Hapmap2;RS=rs276701825;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	72666468	72666567	.	+	.	Name=Leaf_width;B73v2_pos=2:70427108;1allele=T/C;version=Hapmap2;RS=rs807858646;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	72666582	72666681	.	+	.	Name=Leaf_width;B73v2_pos=2:70427222;1allele=C/T;version=Hapmap2;RS=rs833796143;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	73027700	73027799	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:70730408;1allele=T/C;version=Hapmap2;RS=rs826045642;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	73058526	73058625	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:70760052;1allele=G/A;version=Hapmap2;RS=rs825824063;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	73119617	73119716	.	+	.	Name=Ear_height;B73v2_pos=2:70820752;1allele=C/G;version=Hapmap2;RS=rs820291198;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	73168821	73168920	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:70947637;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	73223084	73223183	.	+	.	Name=Leaf_width;B73v2_pos=2:70893322;1allele=C/T;version=Hapmap2;RS=rs821413186;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	73305267	73305366	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:71000475;1allele=G/C;version=Hapmap2;RS=rs845724629;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	73305267	73305366	.	+	.	Name=Ear_height;B73v2_pos=2:71000475;1allele=G/C;version=Hapmap2;RS=rs845724629;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	73356104	73356203	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:71036864;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	73629970	73630069	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:71312142;1allele=T/A;version=Hapmap1;RS=rs131355069;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	73630149	73630248	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:71312321;1allele=G/A;version=Hapmap1;RS=rs131355065;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	73678304	73678403	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:71360515;1allele=T/C;version=Hapmap2;RS=rs809093874;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	73679339	73679438	.	+	.	Name=Sucrose;B73v2_pos=2:71361550;1allele=T/G;version=Hapmap2;RS=rs725588876;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	74004117	74004216	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:71682212;1allele=C/T;version=Hapmap1;RS=rs131355389;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	74023182	74023281	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:71701509;1allele=G/A;version=Hapmap2;RS=rs841391790;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	74076520	74076619	.	+	.	Name=Ear_row_number;B73v2_pos=2:71754387;1allele=G/A;version=Hapmap2;RS=rs824246567;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	74495942	74496041	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:72155341;1allele=CT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	74562989	74563088	.	+	.	Name=Days_to_silk;B73v2_pos=2:72205607;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	74814522	74814621	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:72455627;1allele=T/A;version=Hapmap2;RS=rs846830589;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	74990621	74990720	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:72624410;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	79047646	79047745	.	+	.	Name=Leaf_length;B73v2_pos=1:234292728;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	80879114	80879213	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:78501047;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	82460714	82460813	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:79997240;1allele=A/C;version=Hapmap2;RS=rs826582504;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	83158080	83158179	.	+	.	Name=Stalk_strength;B73v2_pos=2:80719199;1allele=G/A;version=Hapmap2;RS=rs276716982;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	84470394	84470493	.	+	.	Name=Stalk_strength;B73v2_pos=2:82021399;1allele=G/A;version=Hapmap2;RS=rs276717620;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	84612165	84612264	.	+	.	Name=Height_above_ear;B73v2_pos=2:82190999;1allele=A/T;version=Hapmap2;RS=rs848444703;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	85095271	85095370	.	+	.	Name=Plant_height;B73v2_pos=2:82604217;1allele=C/T;version=Hapmap2;RS=rs833819886;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	85556467	85556566	.	+	.	Name=Leaf_length;B73v2_pos=2:83059596;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	85576048	85576147	.	+	.	Name=Fumarate;B73v2_pos=2:83080680;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	85626547	85626646	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:83126905;1allele=C/T;version=Hapmap2;RS=rs131931412;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	85663210	85663309	.	+	.	Name=Plant_height;B73v2_pos=2:83164412;1allele=G/A;version=Hapmap2;RS=rs840904343;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	85663726	85663825	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:83164928;1allele=G/A;version=Hapmap2;RS=rs276720254;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	85782026	85782125	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:83278529;1allele=A/C;version=Hapmap2;RS=rs805450804;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	85803487	85803586	.	+	.	Name=Fumarate;B73v2_pos=2:83299992;1allele=A/C;version=Hapmap2;RS=rs1061862256;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	85823478	85823577	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:83345640;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	85836453	85836552	.	+	.	Name=Plant_height;B73v2_pos=2:83332665;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	85845499	85845598	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:83323616;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	86017715	86017814	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:83450463;1allele=G/A;version=Hapmap2;RS=rs805567848;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	86017715	86017814	.	+	.	Name=Plant_height;B73v2_pos=2:83450463;1allele=G/A;version=Hapmap2;RS=rs805567848;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	86313707	86313806	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:83741756;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	86429940	86430039	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:83857394;1allele=G/A;version=Hapmap2;RS=rs838318099;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	87607924	87608023	.	+	.	Name=Height_above_ear;B73v2_pos=2:201364397;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	89418615	89418714	.	+	.	Name=Height_above_ear;B73v2_pos=2:86759855;1allele=C/T;version=Hapmap2;RS=rs828995786;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	89425245	89425344	.	+	.	Name=Plant_height;B73v2_pos=2:86766485;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	89762834	89762933	.	+	.	Name=Leaf_width;B73v2_pos=2:87154690;1allele=G/A;version=Hapmap2;RS=rs1062120324;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	89876120	89876219	.	+	.	Name=Leaf_width;B73v2_pos=2:87267126;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	89992761	89992860	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:87453141;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	90422044	90422143	.	+	.	Name=Plant_height;B73v2_pos=2:87809304;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	90450245	90450344	.	+	.	Name=Leaf_width;B73v2_pos=2:87841506;1allele=C/T;version=Hapmap2;RS=rs1063552633;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	90938637	90938736	.	+	.	Name=Height_above_ear;B73v2_pos=2:88295768;1allele=A/G;version=Hapmap2;RS=rs1064672515;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	90939716	90939815	.	+	.	Name=Plant_height;B73v2_pos=2:88296849;1allele=A/G;version=Hapmap2;RS=rs827872540;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	90947980	90948079	.	+	.	Name=Leaf_width;B73v2_pos=2:88305113;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	90984756	90984854	.	+	.	Name=Height_above_ear;B73v2_pos=2:88341532;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	91060601	91060700	.	+	.	Name=Days_to_silk;B73v2_pos=2:88418194;1allele=G/A;version=Hapmap2;RS=rs835446928;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	91444714	91444813	.	+	.	Name=Days_to_silk;B73v2_pos=2:88794981;1allele=T/C;version=Hapmap2;RS=rs276730704;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	91497397	91497496	.	+	.	Name=Leaf_width;B73v2_pos=2:88845576;1allele=C/T;version=Hapmap2;RS=rs835231064;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	91570303	91570402	.	+	.	Name=Leaf_width;B73v2_pos=2:88918484;1allele=C/T;version=Hapmap1;RS=rs131360204;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	91818337	91818436	.	+	.	Name=Days_to_silk;B73v2_pos=2:89166360;1allele=C/T;version=Hapmap2;RS=rs832347522;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	91848064	91848163	.	+	.	Name=Leaf_width;B73v2_pos=2:89196087;1allele=C/A;version=Hapmap2;RS=rs129101048;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	91881210	91881309	.	+	.	Name=Leaf_width;B73v2_pos=2:89229232;1allele=C/T;version=Hapmap2;RS=rs276733201;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	92066400	92066499	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:89386528;1allele=A/C;version=Hapmap2;RS=rs846296863;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	92387856	92387955	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:89728978;1allele=G/A;version=Hapmap2;RS=rs809208296;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	93713208	93713307	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:90952621;1allele=C/T;version=Hapmap2;RS=rs276734777;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	94218053	94218152	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:91483147;1allele=G/A;version=Hapmap2;RS=rs724780389;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	94967168	94967267	.	+	.	Name=Leaf_length;B73v2_pos=2:92210875;1allele=G/A;version=Hapmap2;RS=rs846849205;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	95184741	95184840	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:92430996;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	95313175	95313274	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:92578009;1allele=G/A;version=Hapmap1;RS=rs131361072;2ref_allele=AC;3alt_allele=A
chr2	Wallace_2014	SNP	95642639	95642738	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:92861809;1allele=C/G;version=Hapmap2;RS=rs276738882;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	97765585	97765684	.	+	.	Name=Leaf_width;B73v2_pos=2:94668383;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	98314576	98314675	.	+	.	Name=Plant_height;B73v2_pos=2:95268667;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	98647433	98647532	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:95683278;1allele=T/A;version=Hapmap2;RS=rs803759125;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	98914261	98914360	.	+	.	Name=Leaf_length;B73v2_pos=2:95941839;1allele=C/T;version=Hapmap2;RS=rs828563311;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	98982492	98982591	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:96033811;1allele=A/G;version=Hapmap2;RS=rs726119510;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	99162266	99162365	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:96213420;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	99216493	99216592	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:96265422;1allele=G/A;version=Hapmap2;RS=rs844840538;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	99224044	99224143	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:96272975;1allele=C/A;version=Hapmap2;RS=rs829984356;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	99422809	99422908	.	+	.	Name=Days_to_silk;B73v2_pos=2:96470510;1allele=C/A;version=Hapmap2;RS=rs829552668;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	99582521	99582620	.	+	.	Name=Ear_row_number;B73v2_pos=2:96557553;1allele=C/T;version=Hapmap2;RS=rs815449202;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	99946614	99946713	.	+	.	Name=Days_to_silk;B73v2_pos=2:96916061;1allele=G/A;version=Hapmap2;RS=rs822746656;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	100280919	100281018	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:97239135;1allele=C/G;version=Hapmap2;RS=rs276749471;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	100788235	100788334	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:97754258;1allele=C/T;version=Hapmap2;RS=rs276751134;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	101392363	101392462	.	+	.	Name=Days_to_silk;B73v2_pos=2:98398825;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	102004691	102004790	.	+	.	Name=Days_to_silk;B73v2_pos=2:98978319;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	102601092	102601191	.	+	.	Name=Ear_height;B73v2_pos=2:99546039;1allele=A/G;version=Hapmap2;RS=rs276753322;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	102606755	102606854	.	+	.	Name=Total_amino_acids;B73v2_pos=2:99551702;1allele=A/G;version=Hapmap2;RS=rs830158111;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	102614290	102614389	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:99559237;1allele=C/T;version=Hapmap2;RS=rs276753599;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	102616231	102616330	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:99561178;1allele=C/T;version=Hapmap2;RS=rs810828889;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	102626792	102626891	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:99571740;1allele=G/A;version=Hapmap2;RS=rs276753690;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	102752307	102752406	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:99693575;1allele=G/A;version=Hapmap2;RS=rs847915302;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	102836408	102836507	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:99798872;1allele=A/T;version=Hapmap2;RS=rs829897863;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	102884730	102884829	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:99845881;1allele=A/T;version=Hapmap2;RS=rs834842818;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	102931932	102932031	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:99892852;1allele=A/G;version=Hapmap2;RS=rs276754745;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	102961165	102961264	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:99922086;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	103023888	103023987	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:99983693;1allele=C/A;version=Hapmap2;RS=rs276755283;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	103086831	103086930	.	+	.	Name=Days_to_silk;B73v2_pos=2:100046059;1allele=A/G;version=Hapmap2;RS=rs836478717;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	104188679	104188778	.	+	.	Name=Height_above_ear;B73v2_pos=2:101120639;1allele=C/T;version=Hapmap2;RS=rs843337652;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	104231597	104231696	.	+	.	Name=Stalk_strength;B73v2_pos=2:101163561;1allele=G/A;version=Hapmap2;RS=rs276758542;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	104233160	104233259	.	+	.	Name=Days_to_silk;B73v2_pos=2:101165124;1allele=C/A;version=Hapmap2;RS=rs849788094;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	104246475	104246574	.	+	.	Name=Days_to_silk;B73v2_pos=2:101178441;1allele=A/G;version=Hapmap2;RS=rs276758618;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	104304991	104305090	.	+	.	Name=Ear_height;B73v2_pos=2:101236857;1allele=G/A;version=Hapmap2;RS=rs129105075;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	104348656	104348754	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:101276497;1allele=G/T;version=Hapmap2;RS=rs804924561;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	104693628	104693727	.	+	.	Name=Days_to_silk;B73v2_pos=2:101611308;1allele=A/T;version=Hapmap2;RS=rs836836304;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	104826931	104827030	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:101744787;1allele=C/T;version=Hapmap2;RS=rs808187920;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	105142851	105142950	.	+	.	Name=Tassel_length;B73v2_pos=2:102051953;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	105319185	105319284	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:102226323;1allele=G/A;version=Hapmap2;RS=rs831952769;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	105732081	105732180	.	+	.	Name=Tassel_length;B73v2_pos=2:102636147;1allele=A/T;version=Hapmap2;RS=rs840258633;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	105791391	105791490	.	+	.	Name=Ear_height;B73v2_pos=2:102695427;1allele=A/G;version=Hapmap2;RS=rs802660518;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	105843981	105844080	.	+	.	Name=Height_above_ear;B73v2_pos=2:102765919;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	105915694	105915793	.	+	.	Name=Height_above_ear;B73v2_pos=2:102818085;1allele=A/G;version=Hapmap2;RS=rs801543098;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	106804950	106805049	.	+	.	Name=Leaf_width;B73v2_pos=2:103686276;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	106816433	106816532	.	+	.	Name=Height_above_ear;B73v2_pos=2:103697759;1allele=T/C;version=Hapmap2;RS=rs809005798;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	106908878	106908977	.	+	.	Name=Leaf_width;B73v2_pos=2:103788717;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	107032576	107032675	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:103918513;1allele=C/T;version=Hapmap2;RS=rs808318172;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	107086449	107086548	.	+	.	Name=Plant_height;B73v2_pos=2:103972598;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	107097975	107098074	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:103984124;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	107290368	107290467	.	+	.	Name=Malate;B73v2_pos=2:104097004;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	107327114	107327213	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:104205586;1allele=C/T;version=Hapmap2;RS=rs131926283;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	107486326	107486425	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:104261913;1allele=A/C;version=Hapmap2;RS=rs724824923;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	107939285	107939384	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:104822369;1allele=G/A;version=Hapmap1;RS=rs812828605;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	108101630	108101729	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:104983680;1allele=G/A;version=Hapmap2;RS=rs725651368;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	108413433	108413532	.	+	.	Name=Height_above_ear;B73v2_pos=2:105304193;1allele=T/A;version=Hapmap2;RS=rs839969358;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	108541963	108542062	.	+	.	Name=Leaf_width;B73v2_pos=2:105431045;1allele=A/G;version=Hapmap2;RS=rs811069321;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	110436268	110436367	.	+	.	Name=Leaf_width;B73v2_pos=2:107316411;1allele=G/A;version=Hapmap2;RS=rs131927279;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	110455674	110455773	.	+	.	Name=Total_amino_acids;B73v2_pos=2:107335817;1allele=G/A;version=Hapmap2;RS=rs847794028;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	110479842	110479941	.	+	.	Name=Total_amino_acids;B73v2_pos=2:107359762;1allele=G/C;version=Hapmap2;RS=rs726058061;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	110629429	110629528	.	+	.	Name=Total_amino_acids;B73v2_pos=2:107514594;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	110745296	110745395	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:107619001;1allele=C/T;version=Hapmap2;RS=rs824026368;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	110786795	110786894	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:107639114;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	110796826	110796925	.	+	.	Name=Days_to_silk;B73v2_pos=2:107665774;1allele=G/A;version=Hapmap2;RS=rs828582145;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	112026638	112026737	.	+	.	Name=Plant_height;B73v2_pos=2:108869047;1allele=C/T;version=Hapmap2;RS=rs276774447;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	112026638	112026737	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:108869047;1allele=C/T;version=Hapmap2;RS=rs276774447;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	112077224	112077323	.	+	.	Name=Plant_height;B73v2_pos=2:108914335;1allele=G/A;version=Hapmap2;RS=rs826530004;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	112077224	112077323	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:108914335;1allele=G/A;version=Hapmap2;RS=rs826530004;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	112084968	112085067	.	+	.	Name=Days_to_silk;B73v2_pos=2:108906208;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	112100448	112100547	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:108930838;1allele=/TAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	112121641	112121740	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:108952834;1allele=A/G;version=Hapmap2;RS=rs276774646;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	112290299	112290398	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:109120634;1allele=C/A;version=Hapmap2;RS=rs832510240;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	112522784	112522883	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:109339003;1allele=T/A;version=Hapmap2;RS=rs849683708;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	112669001	112669100	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:109485517;1allele=A/T;version=Hapmap2;RS=rs1061782017;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	112674335	112674434	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:109490851;1allele=A/T;version=Hapmap2;RS=rs831442464;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	112882766	112882865	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:109697001;1allele=T/A;version=Hapmap1;RS=rs131928653;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	112932248	112932347	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:109753023;1allele=C/T;version=Hapmap2;RS=rs847214268;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	113043709	113043808	.	+	.	Name=Plant_height;B73v2_pos=2:109856189;1allele=T/A;version=Hapmap2;RS=rs844610450;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	113046112	113046211	.	+	.	Name=Leaf_length;B73v2_pos=2:109858454;1allele=T/G;version=Hapmap2;RS=rs814945676;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	113279385	113279484	.	+	.	Name=Plant_height;B73v2_pos=2:110075416;1allele=G/A;version=Hapmap2;RS=rs804360085;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	113554593	113554692	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:110345548;1allele=A/G;version=Hapmap2;RS=rs848462279;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	113642672	113642771	.	+	.	Name=Total_amino_acids;B73v2_pos=2:110429079;1allele=A/G;version=Hapmap2;RS=rs726536546;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	113891485	113891584	.	+	.	Name=Plant_height;B73v2_pos=2:110672039;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	113909235	113909334	.	+	.	Name=Plant_height;B73v2_pos=2:110688086;1allele=G/A;version=Hapmap1;RS=rs838364361;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	113909235	113909334	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:110688086;1allele=G/A;version=Hapmap1;RS=rs838364361;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	114599442	114599541	.	+	.	Name=Leaf_length;B73v2_pos=2:111354674;1allele=A/G;version=Hapmap2;RS=rs843683629;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	114961478	114961577	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:111704863;1allele=T/C;version=Hapmap2;RS=rs727129372;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	115077096	115077195	.	+	.	Name=Plant_height;B73v2_pos=2:111820406;1allele=T/G;version=Hapmap2;RS=rs814844998;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	115077096	115077195	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:111820406;1allele=T/G;version=Hapmap2;RS=rs814844998;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	115081322	115081421	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:111824632;1allele=G/A;version=Hapmap2;RS=rs276781036;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	115559433	115559532	.	+	.	Name=Height_above_ear;B73v2_pos=2:112300217;1allele=A/G;version=Hapmap2;RS=rs834292260;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	115621607	115621706	.	+	.	Name=Height_above_ear;B73v2_pos=2:112361157;1allele=T/C;version=Hapmap2;RS=rs806371887;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	115624714	115624813	.	+	.	Name=Leaf_length;B73v2_pos=2:112364264;1allele=A/T;version=Hapmap2;RS=rs836323134;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	115907383	115907482	.	+	.	Name=Sucrose;B73v2_pos=2:112589592;1allele=C/T;version=Hapmap2;RS=rs827474062;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	116104097	116104196	.	+	.	Name=Days_to_silk;B73v2_pos=2:112790356;1allele=A/C;version=Hapmap1;RS=rs131930208;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	116564988	116565087	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:113230441;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	117484463	117484562	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:114187711;1allele=T/C;version=Hapmap2;RS=rs830843271;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	119234828	119234927	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:48325638;1allele=G/A;version=Hapmap2;RS=rs278491278;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	119450341	119450440	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:48533141;1allele=G/T;version=Hapmap2;RS=rs823012853;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	120069094	120069193	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:300330348;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	120397674	120397773	.	+	.	Name=Height_above_ear;B73v2_pos=2:116487056;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	121240975	121241074	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:117331533;1allele=A/T;version=Hapmap2;RS=rs1061995954;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	121494829	121494928	.	+	.	Name=Height_above_ear;B73v2_pos=2:117561311;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	121802757	121802856	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:117870568;1allele=T/C;version=Hapmap2;RS=rs129120097;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	122464553	122464652	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:118507934;1allele=G/A;version=Hapmap2;RS=rs276791102;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	122464553	122464652	.	+	.	Name=Plant_height;B73v2_pos=2:118507934;1allele=G/A;version=Hapmap2;RS=rs276791102;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	122464556	122464655	.	+	.	Name=Plant_height;B73v2_pos=2:118507937;1allele=T/C;version=Hapmap2;RS=rs276791103;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	122464556	122464655	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:118507937;1allele=T/C;version=Hapmap2;RS=rs276791103;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	122625416	122625515	.	+	.	Name=Cob_diameter;B73v2_pos=1:250864503;1allele=A/T;version=Hapmap2;RS=rs836229360;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	122672667	122672766	.	+	.	Name=Days_to_silk;B73v2_pos=2:118714101;1allele=G/A;version=Hapmap2;RS=rs811612234;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	122759459	122759558	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:118812709;1allele=G/A;version=Hapmap2;RS=rs818894887;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	122775204	122775303	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:118801147;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	122831884	122831983	.	+	.	Name=Days_to_silk;B73v2_pos=2:118871364;1allele=C/T;version=Hapmap2;RS=rs814992076;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	122840095	122840194	.	+	.	Name=Days_to_silk;B73v2_pos=2:118879575;1allele=G/T;version=Hapmap2;RS=rs829465623;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	122854165	122854264	.	+	.	Name=Days_to_silk;B73v2_pos=2:118893645;1allele=G/A;version=Hapmap2;RS=rs816365152;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	122857967	122858066	.	+	.	Name=Days_to_silk;B73v2_pos=2:118897447;1allele=A/T;version=Hapmap2;RS=rs846045676;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	123513756	123513855	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:119557626;1allele=T/A;version=Hapmap2;RS=rs276795444;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	123738987	123739086	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:119777429;1allele=A/C;version=Hapmap2;RS=rs811575686;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	123956390	123956489	.	+	.	Name=Days_to_silk;B73v2_pos=2:119994250;1allele=G/T;version=Hapmap2;RS=rs724539486;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	124095331	124095430	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:120129465;1allele=C/T;version=Hapmap2;RS=rs826692304;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	124226542	124226641	.	+	.	Name=Fumarate;B73v2_pos=2:120269872;1allele=C/T;version=Hapmap2;RS=rs832292385;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	124364312	124364411	.	+	.	Name=Glucose;B73v2_pos=2:120406981;1allele=A/T;version=Hapmap2;RS=rs811836972;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	124393861	124393960	.	+	.	Name=Ear_height;B73v2_pos=2:120436529;1allele=G/C;version=Hapmap2;RS=rs131933323;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	125856870	125856969	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:121859869;1allele=C/T;version=Hapmap2;RS=rs841371441;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	126222437	126222536	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:122223585;1allele=C/T;version=Hapmap2;RS=rs826727482;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	128092628	128092727	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:124045494;1allele=A/T;version=Hapmap2;RS=rs823228977;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	128161298	128161397	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:124112987;1allele=C/T;version=Hapmap2;RS=rs726285200;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	128648841	128648940	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:124576499;1allele=G/A;version=Hapmap2;RS=rs835732212;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	129173364	129173463	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:125093098;1allele=C/T;version=Hapmap2;RS=rs819254487;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	129234158	129234257	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:125153894;1allele=G/T;version=Hapmap2;RS=rs725828984;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	129467312	129467411	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:125384901;1allele=G/A;version=Hapmap2;RS=rs816707854;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	129521082	129521181	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:125440986;1allele=C/T;version=Hapmap2;RS=rs819221046;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	129551616	129551715	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:125471011;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	129743472	129743571	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:125651724;1allele=G/A;version=Hapmap2;RS=rs848348898;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	130032756	130032855	.	+	.	Name=Leaf_length;B73v2_pos=2:125940621;1allele=A/-;version=Hapmap1;RS=rs131935025;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	130054742	130054841	.	+	.	Name=Tassel_length;B73v2_pos=2:125962607;1allele=A/C;version=Hapmap2;RS=rs727324454;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	130063760	130063859	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:125971627;1allele=A/G;version=Hapmap2;RS=rs806162121;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	130067533	130067632	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:125975401;1allele=C/T;version=Hapmap2;RS=rs806936922;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	130076883	130076982	.	+	.	Name=Plant_height;B73v2_pos=2:125984755;1allele=T/C;version=Hapmap2;RS=rs831293561;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	130773565	130773664	.	+	.	Name=Glucose;B73v2_pos=2:126687818;1allele=T/C;version=Hapmap2;RS=rs841728936;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	131217285	131217384	.	+	.	Name=Ear_height;B73v2_pos=2:127140815;1allele=T/A;version=Hapmap2;RS=rs849315794;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	131309149	131309248	.	+	.	Name=Leaf_width;B73v2_pos=2:127224967;1allele=G/A;version=Hapmap2;RS=rs724269677;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	131538125	131538224	.	+	.	Name=Plant_height;B73v2_pos=2:127452190;1allele=G/C;version=Hapmap2;RS=rs828357541;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	131903364	131903463	.	+	.	Name=Height_above_ear;B73v2_pos=2:127815665;1allele=C/T;version=Hapmap2;RS=rs814380370;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	132056796	132056895	.	+	.	Name=Fumarate;B73v2_pos=2:127969487;1allele=C/T;version=Hapmap2;RS=rs726953250;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	132091645	132091744	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:128016220;1allele=T/C;version=Hapmap2;RS=rs818920783;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	132139199	132139298	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:128063773;1allele=G/A;version=Hapmap2;RS=rs817536733;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	132139199	132139298	.	+	.	Name=Plant_height;B73v2_pos=2:128063773;1allele=G/A;version=Hapmap2;RS=rs817536733;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	132356043	132356142	.	+	.	Name=Plant_height;B73v2_pos=2:128280609;1allele=G/T;version=Hapmap2;RS=rs847965672;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	132409458	132409557	.	+	.	Name=Plant_height;B73v2_pos=2:128334026;1allele=G/A;version=Hapmap2;RS=rs725536540;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	132433156	132433255	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:128349154;1allele=C/T;version=Hapmap2;RS=rs831117699;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	132561291	132561390	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:128458643;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	132590090	132590189	.	+	.	Name=Days_to_silk;B73v2_pos=2:128513002;1allele=C/T;version=Hapmap2;RS=rs827856318;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	132590172	132590271	.	+	.	Name=Days_to_silk;B73v2_pos=2:128513084;1allele=C/T;version=Hapmap2;RS=rs815259151;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	132655931	132656030	.	+	.	Name=Days_to_silk;B73v2_pos=2:128566414;1allele=C/T;version=Hapmap2;RS=rs814771669;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	132718161	132718260	.	+	.	Name=Days_to_silk;B73v2_pos=2:128629778;1allele=G/A;version=Hapmap2;RS=rs841007860;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	132724564	132724663	.	+	.	Name=Days_to_silk;B73v2_pos=2:128636183;1allele=G/T;version=Hapmap1;RS=rs131936371;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	132870116	132870215	.	+	.	Name=Days_to_silk;B73v2_pos=2:128820633;1allele=G/T;version=Hapmap2;RS=rs844916727;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	132932194	132932293	.	+	.	Name=Days_to_silk;B73v2_pos=2:128882606;1allele=G/A;version=Hapmap2;RS=rs831646581;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	132967075	132967174	.	+	.	Name=Days_to_silk;B73v2_pos=2:128917497;1allele=G/A;version=Hapmap1;RS=rs131936427;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	132976036	132976135	.	+	.	Name=Days_to_silk;B73v2_pos=2:128926878;1allele=C/T;version=Hapmap2;RS=rs847012521;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	133148433	133148532	.	+	.	Name=Days_to_silk;B73v2_pos=2:129089403;1allele=G/A;version=Hapmap2;RS=rs810308559;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	133245442	133245541	.	+	.	Name=Days_to_silk;B73v2_pos=2:129186506;1allele=G/A;version=Hapmap2;RS=rs820729712;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	133305182	133305281	.	+	.	Name=Stalk_strength;B73v2_pos=2:129246983;1allele=C/T;version=Hapmap2;RS=rs843536048;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	133322002	133322101	.	+	.	Name=Fumarate;B73v2_pos=2:129263632;1allele=T/C;version=Hapmap2;RS=rs1062052576;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	133338439	133338538	.	+	.	Name=Days_to_silk;B73v2_pos=2:129280074;1allele=A/T;version=Hapmap2;RS=rs842171524;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	133369761	133369860	.	+	.	Name=Days_to_silk;B73v2_pos=2:129311400;1allele=A/T;version=Hapmap2;RS=rs817845966;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	133418451	133418550	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:129360104;1allele=G/A;version=Hapmap2;RS=rs838441357;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	133418451	133418550	.	+	.	Name=Leaf_length;B73v2_pos=2:129360104;1allele=G/A;version=Hapmap2;RS=rs838441357;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	133420443	133420542	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:129362097;1allele=C/T;version=Hapmap2;RS=rs805902580;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	133724600	133724699	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:129656587;1allele=G/A;version=Hapmap2;RS=rs836954403;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	133746765	133746864	.	+	.	Name=Ear_row_number;B73v2_pos=2:129678752;1allele=G/A;version=Hapmap2;RS=rs276810468;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	133940737	133940836	.	+	.	Name=Height_above_ear;B73v2_pos=2:129873494;1allele=G/C;version=Hapmap2;RS=rs823249883;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	134101646	134101745	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:130034966;1allele=G/A;version=Hapmap1;RS=rs849465709;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	134308162	134308261	.	+	.	Name=Height_above_ear;B73v2_pos=2:130240530;1allele=G/A;version=Hapmap2;RS=rs844197129;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	134342953	134343052	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:130275323;1allele=G/A;version=Hapmap2;RS=rs276811546;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	134346306	134346405	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:130278676;1allele=A/T;version=Hapmap2;RS=rs129135097;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	134392523	134392622	.	+	.	Name=Leaf_length;B73v2_pos=2:130324289;1allele=G/A;version=Hapmap2;RS=rs840737745;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	134633009	134633108	.	+	.	Name=Ear_row_number;B73v2_pos=2:130564026;1allele=A/G;version=Hapmap2;RS=rs1063577731;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	134633010	134633109	.	+	.	Name=Ear_row_number;B73v2_pos=2:130564027;1allele=G/C;version=Hapmap2;RS=rs1064299065;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	134637374	134637473	.	+	.	Name=Ear_row_number;B73v2_pos=2:130568391;1allele=G/A;version=Hapmap2;RS=rs1060583798;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	134661169	134661268	.	+	.	Name=Ear_row_number;B73v2_pos=2:130592191;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	134661456	134661555	.	+	.	Name=Ear_row_number;B73v2_pos=2:130592478;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	134676326	134676425	.	+	.	Name=Ear_row_number;B73v2_pos=2:130612991;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	135062000	135062099	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:130998839;1allele=G/A;version=Hapmap2;RS=rs832402904;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	135065758	135065857	.	+	.	Name=Height_above_ear;B73v2_pos=2:131002597;1allele=G/A;version=Hapmap2;RS=rs804934617;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	135326842	135326941	.	+	.	Name=Height_above_ear;B73v2_pos=2:131265759;1allele=G/A;version=Hapmap1;RS=rs131937316;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	135411737	135411836	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:131350249;1allele=T/G;version=Hapmap2;RS=rs131937454;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	135425097	135425196	.	+	.	Name=Leaf_width;B73v2_pos=2:131365700;1allele=T/G;version=Hapmap2;RS=rs828756824;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	135666022	135666121	.	+	.	Name=Height_above_ear;B73v2_pos=2:131596785;1allele=C/A;version=Hapmap2;RS=rs823552323;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	136368628	136368727	.	+	.	Name=Height_above_ear;B73v2_pos=2:132334403;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	137297707	137297806	.	+	.	Name=Height_above_ear;B73v2_pos=2:133229158;1allele=A/G;version=Hapmap2;RS=rs839495499;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	137367458	137367557	.	+	.	Name=Ear_row_number;B73v2_pos=2:133298230;1allele=T/A;version=Hapmap2;RS=rs1061553861;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	137546321	137546420	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:133641393;1allele=T/C;version=Hapmap2;RS=rs838787265;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	137590806	137590905	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:133685880;1allele=C/G;version=Hapmap2;RS=rs834519361;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	137620753	137620852	.	+	.	Name=Ear_row_number;B73v2_pos=2:133715827;1allele=G/A;version=Hapmap2;RS=rs822945452;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	137826006	137826105	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:133919402;1allele=G/A;version=Hapmap2;RS=rs832940600;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	137826008	137826107	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:133919404;1allele=G/A;version=Hapmap2;RS=rs845194899;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	138249281	138249380	.	+	.	Name=Ear_row_number;B73v2_pos=2:134325024;1allele=T/C;version=Hapmap2;RS=rs845694837;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	138285690	138285789	.	+	.	Name=Ear_row_number;B73v2_pos=2:134361443;1allele=T/C;version=Hapmap2;RS=rs813545093;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	139177832	139177931	.	+	.	Name=Leaf_width;B73v2_pos=2:135238544;1allele=G/C;version=Hapmap2;RS=rs809549286;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	139861891	139861990	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:135892399;1allele=C/T;version=Hapmap2;RS=rs842999975;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	140012337	140012436	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:136032282;1allele=C/T;version=Hapmap2;RS=rs1064565744;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	140234003	140234102	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:136253957;1allele=A/G;version=Hapmap2;RS=rs1060510431;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	140688199	140688298	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:136668786;1allele=A/G;version=Hapmap2;RS=rs814012973;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	140854885	140854984	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:136839647;1allele=A/C;version=Hapmap2;RS=rs812806405;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	141072354	141072453	.	+	.	Name=Total_amino_acids;B73v2_pos=2:137043537;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	141275564	141275663	.	+	.	Name=Cob_diameter;B73v2_pos=2:137241051;1allele=T/A;version=Hapmap2;RS=rs1063896573;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	141362733	141362832	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:137327941;1allele=G/A;version=Hapmap2;RS=rs829927222;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	141478755	141478854	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:137361218;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	141492517	141492616	.	+	.	Name=Total_amino_acids;B73v2_pos=2:137398266;1allele=C/T;version=Hapmap2;RS=rs807968560;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	141502336	141502435	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:137408088;1allele=A/G;version=Hapmap2;RS=rs825813921;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	141591264	141591363	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:137496504;1allele=A/G;version=Hapmap2;RS=rs810707543;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	141622626	141622725	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:137524028;1allele=C/T;version=Hapmap2;RS=rs813509289;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	141651196	141651295	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:137550352;1allele=G/A;version=Hapmap2;RS=rs811782745;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	141872844	141872943	.	+	.	Name=Plant_height;B73v2_pos=2:137771577;1allele=G/A;version=Hapmap2;RS=rs839542823;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	143222101	143222200	.	+	.	Name=Leaf_length;B73v2_pos=2:139084877;1allele=T/C;version=Hapmap2;RS=rs810299606;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	143359781	143359880	.	+	.	Name=Cob_diameter;B73v2_pos=2:139234280;1allele=G/A;version=Hapmap2;RS=rs830601687;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	144600495	144600594	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:140458942;1allele=C/T;version=Hapmap2;RS=rs847244099;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	144610817	144610916	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:140470465;1allele=G/A;version=Hapmap2;RS=rs828076033;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	144669480	144669579	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:140529128;1allele=G/A;version=Hapmap2;RS=rs839509950;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	145541879	145541978	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:141427818;1allele=T/C;version=Hapmap2;RS=rs841260248;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	145546293	145546392	.	+	.	Name=Height_above_ear;B73v2_pos=2:141432232;1allele=G/A;version=Hapmap2;RS=rs848264364;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	146032901	146033000	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:141805699;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	146975098	146975197	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:142779706;1allele=G/C;version=Hapmap2;RS=rs725077333;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	147039574	147039673	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:142793722;1allele=G/A;version=Hapmap2;RS=rs819355955;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	147203397	147203496	.	+	.	Name=Total_amino_acids;B73v2_pos=2:142950879;1allele=G/T;version=Hapmap2;RS=rs808664197;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	147203938	147204037	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:142951420;1allele=G/A;version=Hapmap2;RS=rs810558744;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	147251705	147251804	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:142999220;1allele=G/A;version=Hapmap2;RS=rs836643576;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	147303706	147303805	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:143044747;1allele=T/C;version=Hapmap2;RS=rs131942407;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	147384331	147384430	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:143134537;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	147437347	147437446	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:143187975;1allele=C/T;version=Hapmap2;RS=rs828282600;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	147437427	147437526	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:143188055;1allele=C/A;version=Hapmap2;RS=rs813109938;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	147446110	147446209	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:143196738;1allele=G/A;version=Hapmap2;RS=rs831773959;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	147623931	147624030	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:143372973;1allele=C/T;version=Hapmap2;RS=rs810332954;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	147643525	147643624	.	+	.	Name=Sucrose;B73v2_pos=2:143392566;1allele=A/T;version=Hapmap2;RS=rs131942687;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	147701839	147701938	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:143450779;1allele=A/C;version=Hapmap2;RS=rs131942785;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	147717959	147718058	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:143466899;1allele=G/A;version=Hapmap2;RS=rs839116333;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	147738275	147738374	.	+	.	Name=Tassel_length;B73v2_pos=2:143487373;1allele=A/T;version=Hapmap2;RS=rs804103496;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	147738422	147738521	.	+	.	Name=Tassel_length;B73v2_pos=2:143487520;1allele=G/C;version=Hapmap2;RS=rs849519472;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	147738495	147738594	.	+	.	Name=Tassel_length;B73v2_pos=2:143487593;1allele=G/A;version=Hapmap2;RS=rs847547685;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	147738559	147738658	.	+	.	Name=Leaf_length;B73v2_pos=2:143487657;1allele=G/T;version=Hapmap2;RS=rs838539332;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	148462650	148462749	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:144193870;1allele=A/-;version=Hapmap1;RS=rs131943174;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	149136029	149136128	.	+	.	Name=Plant_height;B73v2_pos=2:144841881;1allele=G/C;version=Hapmap2;RS=rs835727697;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	149151478	149151577	.	+	.	Name=Plant_height;B73v2_pos=2:144857196;1allele=C/T;version=Hapmap2;RS=rs844819330;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	149152242	149152341	.	+	.	Name=Plant_height;B73v2_pos=2:144857961;1allele=A/G;version=Hapmap2;RS=rs814818899;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	149167639	149167738	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:144873359;1allele=A/G;version=Hapmap2;RS=rs129144893;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	150331449	150331548	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:145991698;1allele=C/T;version=Hapmap1;RS=rs131943936;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	150422645	150422744	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:146087750;1allele=C/T;version=Hapmap2;RS=rs1060710072;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	150422645	150422744	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:146087750;1allele=C/T;version=Hapmap2;RS=rs1060710072;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	150523857	150523956	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:146191418;1allele=A/G;version=Hapmap2;RS=rs801636353;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	150865042	150865141	.	+	.	Name=Leaf_length;B73v2_pos=2:146534268;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	150934481	150934580	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:146603446;1allele=G/A;version=Hapmap2;RS=rs805532962;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	151324619	151324718	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:146982114;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	151369472	151369571	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:147011484;1allele=A/T;version=Hapmap2;RS=rs838544438;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	151528255	151528354	.	+	.	Name=Starch;B73v2_pos=2:147195360;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	151588775	151588874	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:147229423;1allele=G/A;version=Hapmap2;RS=rs813003919;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	151739936	151740035	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:147380805;1allele=T/G;version=Hapmap2;RS=rs276834099;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	151877744	151877843	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:147520149;1allele=T/G;version=Hapmap2;RS=rs811964097;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	152656235	152656334	.	+	.	Name=Leaf_length;B73v2_pos=2:148326948;1allele=G/A;version=Hapmap2;RS=rs816084791;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	152903779	152903878	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:148563908;1allele=A/T;version=Hapmap2;RS=rs821215171;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	152925988	152926087	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:148586122;1allele=A/G;version=Hapmap2;RS=rs832496315;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	152996800	152996899	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:148657813;1allele=ATG/;version=Hapmap1;RS=rs131945056;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	152998158	152998257	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:148659171;1allele=A/T;version=Hapmap2;RS=rs831843514;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	153002179	153002278	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:148663193;1allele=G/A;version=Hapmap2;RS=rs129147182;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	153214954	153215053	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:148876657;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	153215325	153215424	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:148877028;1allele=C/A;version=Hapmap2;RS=rs129147335;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	153215547	153215646	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:148877250;1allele=C/A;version=Hapmap2;RS=rs129147338;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	153660067	153660166	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:149334223;1allele=A/T;version=Hapmap2;RS=rs276837645;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	154352266	154352365	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:150010202;1allele=C/G;version=Hapmap2;RS=rs821600487;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	154406784	154406883	.	+	.	Name=Leaf_length;B73v2_pos=2:150064652;1allele=C/T;version=Hapmap2;RS=rs842452798;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	154429130	154429229	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:150087004;1allele=G/A;version=Hapmap2;RS=rs831604817;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	154441508	154441607	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:150099383;1allele=G/A;version=Hapmap2;RS=rs832997722;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	154503062	154503161	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:150161652;1allele=A/T;version=Hapmap2;RS=rs832453392;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	154515298	154515397	.	+	.	Name=Leaf_length;B73v2_pos=2:150173888;1allele=G/T;version=Hapmap2;RS=rs845401215;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	154541751	154541850	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:150201328;1allele=A/G;version=Hapmap2;RS=rs826880892;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	154883405	154883504	.	+	.	Name=Leaf_length;B73v2_pos=2:150540648;1allele=T/G;version=Hapmap2;RS=rs836833735;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	155061803	155061902	.	+	.	Name=Leaf_length;B73v2_pos=2:150718538;1allele=A/G;version=Hapmap2;RS=rs840745446;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	155093685	155093784	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:150752976;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	155122729	155122828	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:150779455;1allele=G/A;version=Hapmap2;RS=rs848898322;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	155138736	155138835	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:150796143;1allele=G/A;version=Hapmap2;RS=rs818069121;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	156122333	156122432	.	+	.	Name=Cob_diameter;B73v2_pos=2:151687292;1allele=C/T;version=Hapmap2;RS=rs831700119;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	156134807	156134906	.	+	.	Name=Days_to_silk;B73v2_pos=2:151699766;1allele=A/G;version=Hapmap2;RS=rs815843632;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	156150643	156150742	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:151715604;1allele=T/C;version=Hapmap2;RS=rs839646831;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	156158064	156158163	.	+	.	Name=Malate;B73v2_pos=2:151723027;1allele=A/G;version=Hapmap2;RS=rs276841190;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	156170305	156170404	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:151735268;1allele=C/G;version=Hapmap2;RS=rs131946785;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	156263588	156263687	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:151828531;1allele=C/T;version=Hapmap2;RS=rs821388556;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	156307767	156307866	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:151872716;1allele=C/G;version=Hapmap2;RS=rs801654185;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	157711210	157711309	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:153129954;1allele=T/G;version=Hapmap2;RS=rs816985200;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	157902996	157903095	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:153371438;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	158011770	158011869	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:153437022;1allele=G/T;version=Hapmap2;RS=rs276843517;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	158012259	158012358	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:153437511;1allele=T/A;version=Hapmap1;RS=rs131947522;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	158697655	158697754	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:154156068;1allele=T/C;version=Hapmap2;RS=rs817136939;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	158699264	158699363	.	+	.	Name=Days_to_silk;B73v2_pos=2:154157677;1allele=G/A;version=Hapmap2;RS=rs129151903;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	158700490	158700589	.	+	.	Name=Days_to_silk;B73v2_pos=2:154158903;1allele=T/A;version=Hapmap2;RS=rs276844103;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	158718337	158718436	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:154176751;1allele=C/T;version=Hapmap2;RS=rs805362306;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	158952979	158953077	.	+	.	Name=Stalk_strength;B73v2_pos=2:154301575;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	159153268	159153367	.	+	.	Name=Stalk_strength;B73v2_pos=2:154592327;1allele=T/A;version=Hapmap2;RS=rs276845209;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	159153471	159153570	.	+	.	Name=Stalk_strength;B73v2_pos=2:154592530;1allele=C/T;version=Hapmap2;RS=rs276845212;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	159510203	159510302	.	+	.	Name=Stalk_strength;B73v2_pos=2:154946778;1allele=C/T;version=Hapmap2;RS=rs276846453;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	160327016	160327115	.	+	.	Name=Stalk_strength;B73v2_pos=2:155769585;1allele=A/T;version=Hapmap2;RS=rs806297844;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	160908056	160908155	.	+	.	Name=Cob_diameter;B73v2_pos=2:156329999;1allele=T/C;version=Hapmap2;RS=rs819622431;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	160968183	160968282	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:156390443;1allele=C/T;version=Hapmap2;RS=rs815641236;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	161022548	161022647	.	+	.	Name=Cob_diameter;B73v2_pos=2:156517278;1allele=A/G;version=Hapmap2;RS=rs1062059246;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	161210790	161210889	.	+	.	Name=Leaf_width;B73v2_pos=1:146801169;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	161403794	161403893	.	+	.	Name=Cob_diameter;B73v2_pos=2:156897981;1allele=C/T;version=Hapmap2;RS=rs1062651375;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	161427833	161427932	.	+	.	Name=Cob_diameter;B73v2_pos=2:156922060;1allele=A/C;version=Hapmap2;RS=rs1061528842;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	161603699	161603798	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:157097574;1allele=A/C;version=Hapmap2;RS=rs803216567;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	161723814	161723913	.	+	.	Name=Tassel_length;B73v2_pos=2:157209918;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	161729702	161729801	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:157215806;1allele=T/C;version=Hapmap2;RS=rs834892425;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	161755107	161755206	.	+	.	Name=Tassel_length;B73v2_pos=2:157233713;1allele=A/C;version=Hapmap2;RS=rs829356602;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	162043475	162043574	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:157581852;1allele=T/C;version=Hapmap1;RS=rs131949080;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	162152789	162152888	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:157638297;1allele=T/A;version=Hapmap2;RS=rs819120548;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	162580248	162580347	.	+	.	Name=Leaf_width;B73v2_pos=2:158065642;1allele=C/T;version=Hapmap2;RS=rs725478012;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	162600961	162601060	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:158100421;1allele=A/C;version=Hapmap2;RS=rs826978179;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	162783873	162783972	.	+	.	Name=Leaf_width;B73v2_pos=2:158280233;1allele=C/T;version=Hapmap2;RS=rs1063740724;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	162979255	162979354	.	+	.	Name=Stalk_strength;B73v2_pos=2:158480449;1allele=G/A;version=Hapmap2;RS=rs802410073;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	163092933	163093032	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:158589558;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	163175649	163175748	.	+	.	Name=Plant_height;B73v2_pos=2:158672275;1allele=G/T;version=Hapmap2;RS=rs847520687;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	163179764	163179863	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:158676390;1allele=C/T;version=Hapmap2;RS=rs801999782;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	163183706	163183805	.	+	.	Name=Leaf_width;B73v2_pos=2:158680331;1allele=A/G;version=Hapmap2;RS=rs810471456;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	163316322	163316421	.	+	.	Name=Leaf_width;B73v2_pos=2:158872981;1allele=C/T;version=Hapmap2;RS=rs830460730;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	163564699	163564798	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:159044939;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	163585965	163586064	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:159066212;1allele=T/C;version=Hapmap2;RS=rs1064121416;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	163614842	163614941	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:159094662;1allele=T/G;version=Hapmap1;RS=rs131949915;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	163647849	163647948	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:159136835;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	163672940	163673039	.	+	.	Name=Malate;B73v2_pos=2:159162507;1allele=A/C;version=Hapmap2;RS=rs802438148;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	163835792	163835891	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:159319794;1allele=A/G;version=Hapmap2;RS=rs810502077;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	163836067	163836166	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:159320069;1allele=C/T;version=Hapmap2;RS=rs811912972;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	164451062	164451161	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:160001428;1allele=G/A;version=Hapmap2;RS=rs833776576;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	164989590	164989689	.	+	.	Name=Starch;B73v2_pos=2:160533886;1allele=T/C;version=Hapmap2;RS=rs820115077;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	165185070	165185169	.	+	.	Name=Tassel_length;B73v2_pos=2:160750066;1allele=C/T;version=Hapmap2;RS=rs832318900;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	165209167	165209266	.	+	.	Name=Tassel_length;B73v2_pos=2:160774163;1allele=C/T;version=Hapmap2;RS=rs1062690192;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	165212817	165212916	.	+	.	Name=Tassel_length;B73v2_pos=2:160781502;1allele=A/G;version=Hapmap2;RS=rs276852776;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	165346328	165346427	.	+	.	Name=Days_to_silk;B73v2_pos=2:160960647;1allele=C/A;version=Hapmap2;RS=rs810513362;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	165466074	165466173	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:161039911;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	165479616	165479715	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:161026370;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	165508565	165508664	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:161120188;1allele=G/A;version=Hapmap2;RS=rs841907223;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	165510270	165510369	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:161121893;1allele=G/A;version=Hapmap2;RS=rs811868070;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	165510272	165510371	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:161121895;1allele=C/G;version=Hapmap2;RS=rs129159396;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	165510769	165510868	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:161122392;1allele=A/G;version=Hapmap2;RS=rs727090282;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	167052866	167052965	.	+	.	Name=Stalk_strength;B73v2_pos=2:162616253;1allele=G/A;version=Hapmap2;RS=rs848147321;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	167197593	167197692	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:162762299;1allele=C/T;version=Hapmap2;RS=rs839707063;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	167881364	167881463	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:163441954;1allele=G/A;version=Hapmap2;RS=rs831972666;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	168010602	168010701	.	+	.	Name=Stalk_strength;B73v2_pos=2:163568220;1allele=T/G;version=Hapmap2;RS=rs131951262;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	168169348	168169447	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:163720351;1allele=G/A;version=Hapmap2;RS=rs276857054;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	168222374	168222473	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:163773377;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	168247705	168247804	.	+	.	Name=Tassel_length;B73v2_pos=2:163798707;1allele=C/G;version=Hapmap1;RS=rs131951416;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	168327721	168327820	.	+	.	Name=Tassel_length;B73v2_pos=2:163880406;1allele=G/T;version=Hapmap2;RS=rs828502425;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	168420953	168421052	.	+	.	Name=Tassel_length;B73v2_pos=2:163970796;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	168421561	168421660	.	+	.	Name=Tassel_length;B73v2_pos=2:163970188;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	168465696	168465795	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:163956279;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	168475001	168475100	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:164040384;1allele=G/T;version=Hapmap2;RS=rs807175513;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	168624983	168625082	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:164184925;1allele=C/T;version=Hapmap2;RS=rs815832010;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	168637752	168637851	.	+	.	Name=Cob_diameter;B73v2_pos=2:164197694;1allele=A/C;version=Hapmap2;RS=rs826369006;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	168718139	168718238	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:164278505;1allele=C/T;version=Hapmap2;RS=rs815206359;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	168737365	168737464	.	+	.	Name=Stalk_strength;B73v2_pos=2:164296120;1allele=T/C;version=Hapmap2;RS=rs805042767;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	168740712	168740811	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:164299468;1allele=G/T;version=Hapmap2;RS=rs276857948;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	168769256	168769355	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:164327274;1allele=T/C;version=Hapmap2;RS=rs276858242;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	169091356	169091455	.	+	.	Name=Malate;B73v2_pos=5:25739067;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	169091356	169091455	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:25739067;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	169352443	169352542	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:164886612;1allele=/AGATCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	169374975	169375074	.	+	.	Name=Leaf_width;B73v2_pos=2:164909017;1allele=T/C;version=Hapmap2;RS=rs829433631;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	169452488	169452587	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:164986738;1allele=T/C;version=Hapmap2;RS=rs129161317;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	169458433	169458532	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:164992630;1allele=G/A;version=Hapmap2;RS=rs830080494;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	169458433	169458532	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:164992630;1allele=G/A;version=Hapmap2;RS=rs830080494;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	170979418	170979517	.	+	.	Name=Tassel_length;B73v2_pos=2:166495186;1allele=G/T;version=Hapmap1;RS=rs129162196;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	171286679	171286778	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:166748965;1allele=T/C;version=Hapmap2;RS=rs845324549;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	171305376	171305475	.	+	.	Name=Cob_diameter;B73v2_pos=2:166819067;1allele=A/G;version=Hapmap2;RS=rs831131165;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	171523041	171523140	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:167028647;1allele=C/T;version=Hapmap2;RS=rs804359150;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	171737727	171737826	.	+	.	Name=Stalk_strength;B73v2_pos=2:167204726;1allele=C/T;version=Hapmap2;RS=rs829239886;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	171919343	171919442	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:167376734;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	173203391	173203490	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:168701141;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	173419133	173419232	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:168914013;1allele=G/A;version=Hapmap2;RS=rs848882165;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	173421979	173422078	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:168916859;1allele=G/A;version=Hapmap2;RS=rs826932387;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	173426495	173426594	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:168921375;1allele=G/A;version=Hapmap2;RS=rs129163958;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	173431415	173431514	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:168926295;1allele=A/G;version=Hapmap2;RS=rs129164032;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	173434221	173434320	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:168929101;1allele=T/C;version=Hapmap2;RS=rs844241997;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	173449195	173449294	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:168944075;1allele=T/C;version=Hapmap2;RS=rs803091494;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	173449635	173449734	.	+	.	Name=Tassel_length;B73v2_pos=2:168944515;1allele=G/A;version=Hapmap2;RS=rs807563031;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	173449962	173450061	.	+	.	Name=Tassel_length;B73v2_pos=2:168944842;1allele=A/G;version=Hapmap2;RS=rs821796132;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	173589521	173589620	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:169081949;1allele=G/A;version=Hapmap2;RS=rs850299918;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	173599483	173599582	.	+	.	Name=Tassel_length;B73v2_pos=2:169091912;1allele=C/T;version=Hapmap2;RS=rs809616429;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	173652936	173653035	.	+	.	Name=Leaf_width;B73v2_pos=2:169147457;1allele=G/A;version=Hapmap2;RS=rs842151949;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	173819342	173819441	.	+	.	Name=Leaf_width;B73v2_pos=2:169308213;1allele=A/G;version=Hapmap2;RS=rs817628486;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	173874312	173874411	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:169364325;1allele=G/C;version=Hapmap1;RS=rs131953681;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	174189836	174189935	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:169671122;1allele=A/G;version=Hapmap2;RS=rs838088589;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	174190168	174190267	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:169671454;1allele=T/C;version=Hapmap2;RS=rs802176029;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	174365196	174365295	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:169849433;1allele=T/C;version=Hapmap2;RS=rs1062025536;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	174447036	174447135	.	+	.	Name=Stalk_strength;B73v2_pos=2:169931363;1allele=C/A;version=Hapmap2;RS=rs839085744;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	174879451	174879550	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:170481822;1allele=G/T;version=Hapmap2;RS=rs838015321;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	174894899	174894998	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:170497270;1allele=C/T;version=Hapmap2;RS=rs276866784;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	174894952	174895051	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:170497323;1allele=A/G;version=Hapmap2;RS=rs817389426;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	174928067	174928166	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:170530441;1allele=A/G;version=Hapmap2;RS=rs817084883;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	174928359	174928458	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:170530733;1allele=A/C;version=Hapmap2;RS=rs831460953;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	174951708	174951807	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:170554391;1allele=T/C;version=Hapmap2;RS=rs814491739;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	175036467	175036566	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:170635956;1allele=C/G;version=Hapmap1;RS=rs131954273;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	175036998	175037097	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:170636487;1allele=G/A;version=Hapmap2;RS=rs812920010;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	175270818	175270917	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:170868274;1allele=A/T;version=Hapmap2;RS=rs802987764;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	175420445	175420544	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:171011461;1allele=A/G;version=Hapmap2;RS=rs1060982691;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	175463289	175463388	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:171054342;1allele=G/A;version=Hapmap2;RS=rs807353542;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	175469557	175469656	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:171060612;1allele=C/T;version=Hapmap2;RS=rs801880872;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	175471816	175471915	.	+	.	Name=Tassel_length;B73v2_pos=2:171062871;1allele=C/G;version=Hapmap2;RS=rs276867679;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	175482928	175483027	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:171073983;1allele=A/G;version=Hapmap1;RS=rs129166843;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	176702561	176702660	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:172218674;1allele=A/G;version=Hapmap2;RS=rs818918075;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	177110615	177110714	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:172600661;1allele=G/A;version=Hapmap2;RS=rs825159630;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	177561616	177561715	.	+	.	Name=Cob_diameter;B73v2_pos=2:173065772;1allele=T/C;version=Hapmap1;RS=rs129169631;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	177668063	177668162	.	+	.	Name=Cob_diameter;B73v2_pos=2:173183034;1allele=G/T;version=Hapmap2;RS=rs1063193181;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	177815386	177815485	.	+	.	Name=Tassel_length;B73v2_pos=2:173329896;1allele=C/A;version=Hapmap2;RS=rs129169942;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	178105351	178105450	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:173609309;1allele=A/C;version=Hapmap2;RS=rs129170414;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	179633060	179633159	.	+	.	Name=Cob_diameter;B73v2_pos=2:175094898;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	179633728	179633827	.	+	.	Name=Cob_diameter;B73v2_pos=2:175094230;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	180142402	180142501	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:175268451;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	180176097	180176196	.	+	.	Name=Tassel_length;B73v2_pos=2:175369071;1allele=A/G;version=Hapmap2;RS=rs814930779;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	180277682	180277781	.	+	.	Name=Leaf_width;B73v2_pos=2:175538654;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	180302730	180302829	.	+	.	Name=Leaf_width;B73v2_pos=2:175512969;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	180789474	180789573	.	+	.	Name=Cob_diameter;B73v2_pos=2:175949765;1allele=G/T;version=Hapmap2;RS=rs834832611;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	180938216	180938315	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:176098146;1allele=T/G;version=Hapmap2;RS=rs844984275;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	180946597	180946696	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:176106527;1allele=G/C;version=Hapmap2;RS=rs814931351;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	181090126	181090225	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:176242912;1allele=G/A;version=Hapmap2;RS=rs129175221;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	181647144	181647243	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:176780395;1allele=T/C;version=Hapmap2;RS=rs844201527;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	181667713	181667812	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:176801188;1allele=A/G;version=Hapmap2;RS=rs276874903;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	181785196	181785295	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:176917765;1allele=A/G;version=Hapmap2;RS=rs847415494;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	181785232	181785331	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:176917801;1allele=A/C;version=Hapmap2;RS=rs841249373;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	181842815	181842914	.	+	.	Name=Starch;B73v2_pos=2:176969054;1allele=C/T;version=Hapmap2;RS=rs850309968;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	181984293	181984392	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:177110639;1allele=C/T;version=Hapmap2;RS=rs129176424;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	182108246	182108345	.	+	.	Name=Leaf_width;B73v2_pos=2:177267983;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	182110398	182110497	.	+	.	Name=Leaf_width;B73v2_pos=2:177265831;1allele=A/C;version=Hapmap2;RS=rs844235500;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	182188874	182188973	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:177187355;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	182859827	182859926	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:177870929;1allele=T/C;version=Hapmap2;RS=rs276876934;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	182868056	182868155	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:177879158;1allele=A/C;version=Hapmap2;RS=rs276877027;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	183077281	183077380	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:178085897;1allele=T/C;version=Hapmap2;RS=rs1062362213;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	183085410	183085509	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:178094026;1allele=T/C;version=Hapmap2;RS=rs131178269;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	183137456	183137555	.	+	.	Name=Starch;B73v2_pos=2:178142184;1allele=G/T;version=Hapmap2;RS=rs850077366;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	183138736	183138835	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:178143464;1allele=T/C;version=Hapmap2;RS=rs850379446;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	183181201	183181300	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:178186514;1allele=T/C;version=Hapmap2;RS=rs276877601;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	183209607	183209706	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:178215573;1allele=A/C;version=Hapmap2;RS=rs804554555;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	183209607	183209706	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:178215573;1allele=A/C;version=Hapmap2;RS=rs804554555;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	183209626	183209725	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:178215592;1allele=C/T;version=Hapmap2;RS=rs1062070144;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	183264704	183264803	.	+	.	Name=Stalk_strength;B73v2_pos=2:178270757;1allele=G/A;version=Hapmap2;RS=rs276877757;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	183265741	183265840	.	+	.	Name=Stalk_strength;B73v2_pos=2:178271794;1allele=C/G;version=Hapmap2;RS=rs276877766;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	183358989	183359088	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:178364871;1allele=A/G;version=Hapmap2;RS=rs1062795315;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	183376710	183376809	.	+	.	Name=Stalk_strength;B73v2_pos=2:178382593;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	183409495	183409594	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:178415378;1allele=T/C;version=Hapmap2;RS=rs840986713;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	183459398	183459497	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:178466524;1allele=A/G;version=Hapmap2;RS=rs818953922;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	183651286	183651385	.	+	.	Name=Ear_height;B73v2_pos=2:178654978;1allele=G/A;version=Hapmap2;RS=rs827726100;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	183871546	183871645	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:208606393;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	184094737	184094836	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:179100014;1allele=A/G;version=Hapmap2;RS=rs836105641;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	184301236	184301335	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:179296783;1allele=C/T;version=Hapmap2;RS=rs1063427760;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	184348154	184348253	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:179392216;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	184348833	184348932	.	+	.	Name=Cob_diameter;B73v2_pos=2:179392772;1allele=T/C;version=Hapmap2;RS=rs819538921;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	184354181	184354280	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:179398120;1allele=C/G;version=Hapmap2;RS=rs131959523;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	184356544	184356643	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:179400483;1allele=G/A;version=Hapmap2;RS=rs811875705;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	184371131	184371230	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:179414834;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	184400706	184400805	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:179446318;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	184416272	184416371	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:179500099;1allele=G/A;version=Hapmap2;RS=rs129180754;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	184507251	184507350	.	+	.	Name=Plant_height;B73v2_pos=2:179556617;1allele=A/G;version=Hapmap2;RS=rs840171999;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	184509761	184509860	.	+	.	Name=Plant_height;B73v2_pos=2:179559126;1allele=A/G;version=Hapmap2;RS=rs811801524;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	184531240	184531339	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:179580622;1allele=T/C;version=Hapmap2;RS=rs834280908;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	184557236	184557335	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:179606521;1allele=T/C;version=Hapmap2;RS=rs815376304;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	184766191	184766290	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:179797704;1allele=G/A;version=Hapmap2;RS=rs809642024;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	184789606	184789705	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:179821016;1allele=A/T;version=Hapmap2;RS=rs812699203;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	184789623	184789722	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:179821033;1allele=A/G;version=Hapmap2;RS=rs830823438;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	184953308	184953407	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:179982891;1allele=C/T;version=Hapmap2;RS=rs847417958;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	185102952	185103051	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:180153718;1allele=G/A;version=Hapmap2;RS=rs808795482;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	185108416	185108515	.	+	.	Name=Cob_diameter;B73v2_pos=2:180159182;1allele=T/A;version=Hapmap2;RS=rs131960093;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	185109420	185109519	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:180160186;1allele=C/G;version=Hapmap1;RS=rs129181462;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	185112542	185112641	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:180163308;1allele=C/T;version=Hapmap1;RS=rs131960137;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	185117551	185117650	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:180168317;1allele=A/G;version=Hapmap2;RS=rs131960230;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	185399757	185399856	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:180449847;1allele=A/G;version=Hapmap2;RS=rs1062326117;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	185400466	185400565	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:180450557;1allele=A/G;version=Hapmap2;RS=rs825920654;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	185400496	185400595	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:180450587;1allele=A/G;version=Hapmap2;RS=rs825596100;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	185468158	185468257	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:180519036;1allele=C/T;version=Hapmap2;RS=rs808992956;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	185567523	185567622	.	+	.	Name=Cob_diameter;B73v2_pos=2:180619753;1allele=T/C;version=Hapmap2;RS=rs846473357;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	185574461	185574560	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:180626692;1allele=C/T;version=Hapmap2;RS=rs805111183;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	185578220	185578319	.	+	.	Name=Ear_height;B73v2_pos=2:180630616;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	185607759	185607858	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:180660183;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	185608057	185608156	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:180660481;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	185614975	185615074	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:180667399;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	185884568	185884667	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:180918651;1allele=T/G;version=Hapmap2;RS=rs848304740;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	186026852	186026951	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:181060088;1allele=G/A;version=Hapmap2;RS=rs837764159;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	186104227	186104326	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:181127320;1allele=A/T;version=Hapmap2;RS=rs129183047;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	186126566	186126665	.	+	.	Name=Cob_diameter;B73v2_pos=2:181151040;1allele=C/G;version=Hapmap2;RS=rs814513320;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	186154545	186154644	.	+	.	Name=Cob_diameter;B73v2_pos=2:181175363;1allele=G/A;version=Hapmap2;RS=rs129183143;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	186309521	186309620	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:181348238;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	186309545	186309644	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:181348262;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	186360853	186360952	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:181400515;1allele=G/T;version=Hapmap2;RS=rs839012904;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	186378059	186378158	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:181417721;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	186384711	186384810	.	+	.	Name=Cob_diameter;B73v2_pos=2:181424366;1allele=A/T;version=Hapmap2;RS=rs131961106;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	186650290	186650389	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:181681439;1allele=G/T;version=Hapmap2;RS=rs129183757;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	186729451	186729550	.	+	.	Name=Ear_height;B73v2_pos=2:181754191;1allele=C/A;version=Hapmap2;RS=rs846534784;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	186817902	186818001	.	+	.	Name=Height_above_ear;B73v2_pos=2:181842730;1allele=G/A;version=Hapmap1;RS=rs131961451;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	186855934	186856033	.	+	.	Name=Stalk_strength;B73v2_pos=2:181880670;1allele=G/C;version=Hapmap2;RS=rs131961484;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	186928090	186928189	.	+	.	Name=Cob_diameter;B73v2_pos=2:181954068;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	186945286	186945385	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:181971269;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	186948776	186948875	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:181974759;1allele=A/G;version=Hapmap2;RS=rs129183877;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	186984565	186984664	.	+	.	Name=Ear_height;B73v2_pos=2:182010252;1allele=G/A;version=Hapmap2;RS=rs815536163;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	186985707	186985806	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:182011394;1allele=T/A;version=Hapmap2;RS=rs835198033;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	187042937	187043036	.	+	.	Name=Stalk_strength;B73v2_pos=2:182088442;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	187049764	187049863	.	+	.	Name=Height_above_ear;B73v2_pos=2:182081661;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	187114942	187115041	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:182107038;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	187115739	187115838	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:182107835;1allele=C/T;version=Hapmap2;RS=rs1063514004;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	187137572	187137671	.	+	.	Name=Stalk_strength;B73v2_pos=2:182133727;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	187635561	187635660	.	+	.	Name=Stalk_strength;B73v2_pos=2:182593434;1allele=G/A;version=Hapmap2;RS=rs802074543;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	187680033	187680132	.	+	.	Name=Height_above_ear;B73v2_pos=2:182637905;1allele=T/C;version=Hapmap2;RS=rs812468799;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	187783734	187783833	.	+	.	Name=Height_above_ear;B73v2_pos=2:182831145;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188030186	188030285	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:182984051;1allele=T/A;version=Hapmap2;RS=rs845708082;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	188083713	188083812	.	+	.	Name=Fumarate;B73v2_pos=2:183037718;1allele=G/A;version=Hapmap2;RS=rs129185543;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	188375507	188375606	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:183335996;1allele=T/C;version=Hapmap2;RS=rs839705283;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	188381972	188382071	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:183342461;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188413503	188413602	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:183373993;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188427201	188427300	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:183387690;1allele=G/A;version=Hapmap2;RS=rs840944376;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	188445567	188445666	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:183408463;1allele=G/C;version=Hapmap2;RS=rs725014404;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	188470894	188470993	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:183433789;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188638041	188638140	.	+	.	Name=Cob_diameter;B73v2_pos=2:183595087;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188659309	188659408	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:183616356;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188659879	188659978	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:183616926;1allele=C/T;version=Hapmap2;RS=rs814847716;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	188659895	188659994	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:183616942;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188660230	188660329	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183617277;1allele=T/C;version=Hapmap2;RS=rs129186249;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	188660586	188660685	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183617633;1allele=T/C;version=Hapmap2;RS=rs129186253;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	188661443	188661542	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183618490;1allele=C/T;version=Hapmap2;RS=rs129186260;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	188670433	188670532	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183627480;1allele=A/G;version=Hapmap2;RS=rs811728097;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	188713744	188713843	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183710744;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188742900	188742999	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:183689960;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188742900	188742999	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:183689960;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188742910	188743009	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:183689950;1allele=/CGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188742910	188743009	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:183689950;1allele=/CGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188743194	188743293	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:183689666;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188745189	188745288	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:183687671;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188855017	188855116	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:183788265;1allele=A/G;version=Hapmap2;RS=rs276882605;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	188855750	188855849	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:183788998;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	188898355	188898454	.	+	.	Name=Tassel_length;B73v2_pos=2:183831605;1allele=A/C;version=Hapmap2;RS=rs817752735;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	188922068	188922167	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183855330;1allele=T/A;version=Hapmap2;RS=rs129186504;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	188923026	188923125	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183856288;1allele=A/C;version=Hapmap2;RS=rs823048391;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	188973810	188973909	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:183918817;1allele=C/A;version=Hapmap1;RS=rs129186531;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	188979883	188979982	.	+	.	Name=Leaf_length;B73v2_pos=2:183924890;1allele=C/T;version=Hapmap2;RS=rs129186575;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	188989942	188990041	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:183934949;1allele=T/C;version=Hapmap2;RS=rs129186642;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	188989942	188990041	.	+	.	Name=Height_above_ear;B73v2_pos=2:183934949;1allele=T/C;version=Hapmap2;RS=rs129186642;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	189001719	189001818	.	+	.	Name=Stalk_strength;B73v2_pos=2:183946728;1allele=C/T;version=Hapmap2;RS=rs849250531;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	189050871	189050970	.	+	.	Name=Ear_height;B73v2_pos=2:184011359;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189050904	189051003	.	+	.	Name=Nitrate;B73v2_pos=2:184011392;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189095893	189095992	.	+	.	Name=Tassel_length;B73v2_pos=2:184039896;1allele=T/C;version=Hapmap2;RS=rs837576796;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	189204282	189204381	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:184139960;1allele=C/T;version=Hapmap2;RS=rs276883041;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	189241554	189241653	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:184172237;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189284896	189284995	.	+	.	Name=Days_to_silk;B73v2_pos=2:184209780;1allele=T/C;version=Hapmap2;RS=rs814795576;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	189285557	189285656	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:184210441;1allele=T/C;version=Hapmap2;RS=rs129187200;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	189285730	189285829	.	+	.	Name=Stalk_strength;B73v2_pos=2:184210614;1allele=T/G;version=Hapmap2;RS=rs813521262;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	189298631	189298730	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:184224783;1allele=G/A;version=Hapmap2;RS=rs808674621;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	189300918	189301017	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:184227070;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189328310	189328409	.	+	.	Name=Height_above_ear;B73v2_pos=2:184255676;1allele=A/G;version=Hapmap2;RS=rs805426461;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	189340020	189340119	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:184267386;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189364477	189364576	.	+	.	Name=Ear_height;B73v2_pos=2:184307574;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189397165	189397264	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:184400983;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189397267	189397366	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:184400881;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189398303	189398402	.	+	.	Name=Ear_height;B73v2_pos=2:184399845;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189405243	189405342	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:184392905;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189633063	189633162	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:184513977;1allele=A/G;version=Hapmap2;RS=rs849242683;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	189825976	189826075	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:184700362;1allele=C/A;version=Hapmap2;RS=rs813772218;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	189833947	189834046	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:184708333;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189869983	189870082	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:184747309;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	189882696	189882795	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:184760023;1allele=G/A;version=Hapmap2;RS=rs131964112;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	189968835	189968934	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:184846119;1allele=A/-;version=Hapmap1;RS=rs131964181;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	190086514	190086613	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:184964488;1allele=A/G;version=Hapmap2;RS=rs869404449;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	190116671	190116770	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:184995599;1allele=/GC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	190116703	190116802	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:184995631;1allele=C/T;version=Hapmap2;RS=rs803236137;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	190132295	190132394	.	+	.	Name=Cob_diameter;B73v2_pos=2:185010981;1allele=TCGGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	190134907	190135006	.	+	.	Name=Cob_diameter;B73v2_pos=2:185013593;1allele=A/T;version=Hapmap2;RS=rs807029760;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	190139895	190139994	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:185018581;1allele=C/T;version=Hapmap2;RS=rs131964658;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	190140562	190140661	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:185019248;1allele=/AGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	190140669	190140768	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:185019355;1allele=A/C;version=Hapmap1;RS=rs131964700;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	190141608	190141707	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:185020294;1allele=CT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	190144953	190145052	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:185023639;1allele=C/T;version=Hapmap2;RS=rs129188424;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	190176699	190176798	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:185057217;1allele=A/G;version=Hapmap2;RS=rs814409883;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	190237107	190237206	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:185113023;1allele=G/A;version=Hapmap2;RS=rs817873657;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	190262067	190262166	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:185137983;1allele=G/A;version=Hapmap2;RS=rs802018594;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	190263180	190263279	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:185139096;1allele=T/C;version=Hapmap2;RS=rs818284173;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	190293114	190293213	.	+	.	Name=Days_to_silk;B73v2_pos=2:185168900;1allele=G/T;version=Hapmap2;RS=rs803057184;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	190345072	190345171	.	+	.	Name=Cob_diameter;B73v2_pos=2:185220706;1allele=C/T;version=Hapmap2;RS=rs129188648;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	190346110	190346209	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:185221744;1allele=C/T;version=Hapmap2;RS=rs823623400;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	190364291	190364390	.	+	.	Name=Ear_height;B73v2_pos=2:185239925;1allele=A/T;version=Hapmap2;RS=rs276884028;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	190505496	190505595	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:185380323;1allele=C/T;version=Hapmap2;RS=rs129189220;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	190514693	190514792	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:185389521;1allele=G/A;version=Hapmap2;RS=rs276884255;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	190514921	190515020	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:185389749;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	190516752	190516851	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:185391580;1allele=T/G;version=Hapmap2;RS=rs129189113;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	190535904	190536003	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:185405861;1allele=T/C;version=Hapmap2;RS=rs815146626;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	190653406	190653505	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:185539922;1allele=C/G;version=Hapmap2;RS=rs849068604;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	190786594	190786693	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:185676549;1allele=A/G;version=Hapmap2;RS=rs827183204;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	190787467	190787566	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:185677422;1allele=T/C;version=Hapmap2;RS=rs830997860;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	190819070	190819169	.	+	.	Name=Stalk_strength;B73v2_pos=2:185698486;1allele=C/T;version=Hapmap2;RS=rs841281753;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	190841453	190841552	.	+	.	Name=Stalk_strength;B73v2_pos=2:185723416;1allele=G/T;version=Hapmap1;RS=rs131965601;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	190858308	190858407	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:185734229;1allele=+/-;version=Hapmap2;RS=rs834332968;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	190858308	190858407	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:185734229;1allele=+/-;version=Hapmap2;RS=rs834332968;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	190908907	190909006	.	+	.	Name=Stalk_strength;B73v2_pos=2:185773826;1allele=A/G;version=Hapmap2;RS=rs827115231;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	190995291	190995390	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:185856622;1allele=G/C;version=Hapmap2;RS=rs841271307;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	191008006	191008105	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:185869387;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	191051005	191051104	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:185912387;1allele=A/G;version=Hapmap2;RS=rs819318421;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	191252769	191252868	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:186123869;1allele=T/A;version=Hapmap2;RS=rs815821025;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	191313831	191313930	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:186184868;1allele=C/T;version=Hapmap2;RS=rs276885398;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	191382412	191382511	.	+	.	Name=Nitrate;B73v2_pos=2:186262514;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	191398438	191398537	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:186278540;1allele=A/G;version=Hapmap2;RS=rs276885699;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	191398588	191398687	.	+	.	Name=Starch;B73v2_pos=2:186278690;1allele=A/G;version=Hapmap2;RS=rs276885701;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	191429617	191429716	.	+	.	Name=Starch;B73v2_pos=2:186309712;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	191431158	191431257	.	+	.	Name=Starch;B73v2_pos=2:186311253;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	191431360	191431459	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:186311455;1allele=A/T;version=Hapmap2;RS=rs131966761;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	191433043	191433142	.	+	.	Name=Starch;B73v2_pos=2:186313138;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	191433800	191433899	.	+	.	Name=Starch;B73v2_pos=2:186313895;1allele=G/C;version=Hapmap2;RS=rs129190749;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	191463243	191463342	.	+	.	Name=Starch;B73v2_pos=2:186389675;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	191469452	191469551	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:186383430;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	191560303	191560402	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:186441460;1allele=C/T;version=Hapmap2;RS=rs129190827;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	191560538	191560637	.	+	.	Name=Days_to_silk;B73v2_pos=2:186441695;1allele=A/T;version=Hapmap2;RS=rs129190829;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	191652821	191652920	.	+	.	Name=Starch;B73v2_pos=2:186534164;1allele=T/G;version=Hapmap1;RS=rs131966983;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	191784543	191784642	.	+	.	Name=Total_amino_acids;B73v2_pos=2:186669276;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192087594	192087693	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:186915642;1allele=G/A;version=Hapmap2;RS=rs840871854;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	192172006	192172105	.	+	.	Name=Total_amino_acids;B73v2_pos=2:187001528;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192175454	192175553	.	+	.	Name=Total_amino_acids;B73v2_pos=2:187004976;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192176839	192176938	.	+	.	Name=Total_amino_acids;B73v2_pos=2:187006361;1allele=G/-;version=Hapmap1;RS=rs131967583;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	192204347	192204446	.	+	.	Name=Nitrate;B73v2_pos=2:187040943;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192204405	192204504	.	+	.	Name=Nitrate;B73v2_pos=2:187041001;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192221792	192221891	.	+	.	Name=Nitrate;B73v2_pos=2:187051586;1allele=A/T;version=Hapmap2;RS=rs276886773;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	192223196	192223295	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187052990;1allele=G/A;version=Hapmap2;RS=rs129191649;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	192223196	192223295	.	+	.	Name=Glutamate;B73v2_pos=2:187052990;1allele=G/A;version=Hapmap2;RS=rs129191649;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	192223480	192223579	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187053274;1allele=/CAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192311538	192311637	.	+	.	Name=Nitrate;B73v2_pos=2:187141709;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192311538	192311637	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:187141709;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192316464	192316563	.	+	.	Name=Glutamate;B73v2_pos=2:187146636;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192345120	192345220	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:187167849;1allele=C/T;version=Hapmap2;RS=rs824198430;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	192371014	192371113	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:187193702;1allele=T/A;version=Hapmap2;RS=rs807641790;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	192454024	192454123	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:187276815;1allele=C/T;version=Hapmap2;RS=rs129191859;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	192541878	192541977	.	+	.	Name=Glutamate;B73v2_pos=2:187368024;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192542411	192542510	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187367491;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192625698	192625797	.	+	.	Name=Total_amino_acids;B73v2_pos=2:187442408;1allele=A/C;version=Hapmap1;RS=rs131968093;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	192640993	192641092	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:187457704;1allele=/GTTGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192720084	192720183	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187555208;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192724418	192724517	.	+	.	Name=Total_amino_acids;B73v2_pos=2:187559543;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192781789	192781888	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:187616864;1allele=G/A;version=Hapmap2;RS=rs131968260;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	192787380	192787479	.	+	.	Name=Plant_height;B73v2_pos=2:187622393;1allele=C/A;version=Hapmap2;RS=rs803404042;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	192787407	192787506	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:187622420;1allele=/GTCCAA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192787572	192787671	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:187622585;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192788384	192788483	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:187623397;1allele=/GTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192842193	192842292	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:187679615;1allele=T/C;version=Hapmap2;RS=rs846179612;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	192850736	192850835	.	+	.	Name=Glutamate;B73v2_pos=2:187688158;1allele=T/C;version=Hapmap2;RS=rs726778593;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	192850736	192850835	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187688158;1allele=T/C;version=Hapmap2;RS=rs726778593;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	192850796	192850895	.	+	.	Name=Glutamate;B73v2_pos=2:187688218;1allele=A/G;version=Hapmap2;RS=rs724758792;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	192850901	192851000	.	+	.	Name=Glutamate;B73v2_pos=2:187688323;1allele=G/A;version=Hapmap2;RS=rs823997390;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	192850987	192851086	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187688409;1allele=G/T;version=Hapmap2;RS=rs823516869;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	192886720	192886819	.	+	.	Name=Glutamate;B73v2_pos=2:187724052;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192940775	192940874	.	+	.	Name=Glutamate;B73v2_pos=2:187783390;1allele=C/T;version=Hapmap2;RS=rs819481408;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	192943326	192943425	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187785941;1allele=G/A;version=Hapmap1;RS=rs131968620;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	192948334	192948433	.	+	.	Name=Ear_height;B73v2_pos=2:187790949;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	192980377	192980476	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:187822510;1allele=A/T;version=Hapmap2;RS=rs276887819;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	193036185	193036284	.	+	.	Name=Starch;B73v2_pos=2:187878305;1allele=T/A;version=Hapmap2;RS=rs807341018;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	193038559	193038658	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:187880679;1allele=/CGGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193256017	193256116	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188056741;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193256431	193256530	.	+	.	Name=Glutamate;B73v2_pos=2:188057155;1allele=G/A;version=Hapmap2;RS=rs813628390;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	193260204	193260303	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188060928;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193347307	193347406	.	+	.	Name=Nitrate;B73v2_pos=2:188151888;1allele=G/A;version=Hapmap2;RS=rs726898717;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	193350938	193351037	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188155519;1allele=T/C;version=Hapmap2;RS=rs129192726;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	193356508	193356607	.	+	.	Name=Starch;B73v2_pos=2:188161086;1allele=G/A;version=Hapmap2;RS=rs843231912;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	193385515	193385614	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188196988;1allele=G/A;version=Hapmap1;RS=rs129192787;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	193405565	193405664	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188217944;1allele=C/T;version=Hapmap2;RS=rs129192804;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	193406023	193406122	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188218402;1allele=C/A;version=Hapmap2;RS=rs845654047;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	193483607	193483706	.	+	.	Name=Glutamate;B73v2_pos=2:188297742;1allele=G/T;version=Hapmap2;RS=rs809846485;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	193483607	193483706	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188297742;1allele=G/T;version=Hapmap2;RS=rs809846485;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	193483607	193483706	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188297742;1allele=G/T;version=Hapmap2;RS=rs809846485;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	193547687	193547786	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188360433;1allele=A/T;version=Hapmap2;RS=rs129192887;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	193551098	193551197	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188363844;1allele=A/G;version=Hapmap2;RS=rs824099794;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	193552455	193552554	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188365201;1allele=A/G;version=Hapmap2;RS=rs129192922;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	193552984	193553083	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188365730;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193555766	193555865	.	+	.	Name=Days_to_silk;B73v2_pos=2:188368512;1allele=G/A;version=Hapmap2;RS=rs821497725;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	193556159	193556258	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188368905;1allele=T/G;version=Hapmap1;RS=rs131969205;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	193564182	193564281	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188376928;1allele=T/G;version=Hapmap2;RS=rs848615011;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	193581480	193581579	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:188394232;1allele=G/A;version=Hapmap2;RS=rs1063056088;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	193581562	193581661	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:188394314;1allele=C/A;version=Hapmap2;RS=rs849993393;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	193582058	193582157	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188394810;1allele=G/A;version=Hapmap2;RS=rs826035615;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	193588586	193588685	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188401337;1allele=A/C;version=Hapmap2;RS=rs276888568;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	193590462	193590561	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188403213;1allele=C/T;version=Hapmap2;RS=rs813230023;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	193591500	193591599	.	+	.	Name=Nitrate;B73v2_pos=2:188404253;1allele=C/T;version=Hapmap2;RS=rs840076317;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	193592885	193592984	.	+	.	Name=Nitrate;B73v2_pos=2:188405639;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193592885	193592984	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188405639;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193602251	193602350	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:188415005;1allele=G/A;version=Hapmap1;RS=rs131969572;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	193653625	193653724	.	+	.	Name=Stalk_strength;B73v2_pos=2:188465599;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193653724	193653823	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188465698;1allele=T/G;version=Hapmap1;RS=rs129193183;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	193653862	193653961	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188465836;1allele=G/A;version=Hapmap1;RS=rs131969677;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	193653888	193653987	.	+	.	Name=Glutamate;B73v2_pos=2:188465862;1allele=A/T;version=Hapmap1;RS=rs129193186;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	193653888	193653987	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188465862;1allele=A/T;version=Hapmap1;RS=rs129193186;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	193658353	193658452	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188470327;1allele=C/T;version=Hapmap2;RS=rs276888756;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	193660238	193660337	.	+	.	Name=Glutamate;B73v2_pos=2:188472212;1allele=C/G;version=Hapmap1;RS=rs131969778;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	193790701	193790800	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:188531912;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193795389	193795488	.	+	.	Name=Glutamate;B73v2_pos=2:188527224;1allele=/CCGCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193795606	193795705	.	+	.	Name=Glutamate;B73v2_pos=2:188527007;1allele=C/A;version=Hapmap1;RS=rs821721003;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	193795606	193795705	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188527007;1allele=C/A;version=Hapmap1;RS=rs821721003;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	193795626	193795725	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:188526987;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193796511	193796610	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:188526102;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193842898	193842997	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:188651851;1allele=A/G;version=Hapmap2;RS=rs829407526;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	193846700	193846799	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188655644;1allele=A/G;version=Hapmap2;RS=rs1064043491;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	193913383	193913482	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188723851;1allele=T/C;version=Hapmap2;RS=rs818631342;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	193918327	193918426	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188729063;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193936196	193936296	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188746939;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193947571	193947670	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188758473;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	193988805	193988904	.	+	.	Name=Total_amino_acids;B73v2_pos=2:188791652;1allele=C/T;version=Hapmap2;RS=rs1064076249;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	194019172	194019271	.	+	.	Name=Glutamate;B73v2_pos=2:188818674;1allele=C/G;version=Hapmap2;RS=rs726457555;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	194062640	194062739	.	+	.	Name=Starch;B73v2_pos=2:188885535;1allele=C/T;version=Hapmap2;RS=rs835435909;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	194064247	194064346	.	+	.	Name=Starch;B73v2_pos=2:188887142;1allele=GTACGT/;version=Hapmap1;RS=rs838483554;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	194079100	194079199	.	+	.	Name=Glutamate;B73v2_pos=2:188901998;1allele=G/C;version=Hapmap2;RS=rs131970394;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	194436659	194436758	.	+	.	Name=Starch;B73v2_pos=2:189216402;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	194439459	194439558	.	+	.	Name=Stalk_strength;B73v2_pos=2:189219202;1allele=G/A;version=Hapmap2;RS=rs830161867;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	194440951	194441050	.	+	.	Name=Ear_height;B73v2_pos=2:189220695;1allele=C/T;version=Hapmap2;RS=rs129193784;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	194466049	194466148	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:189273379;1allele=T/C;version=Hapmap1;RS=rs131186205;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	194713443	194713542	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:189487542;1allele=A/G;version=Hapmap1;RS=rs131971272;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	194730676	194730775	.	+	.	Name=Total_amino_acids;B73v2_pos=2:189504773;1allele=A/G;version=Hapmap2;RS=rs131971080;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	194743809	194743908	.	+	.	Name=Ear_height;B73v2_pos=2:189517909;1allele=C/T;version=Hapmap1;RS=rs131971033;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	194747634	194747733	.	+	.	Name=Total_amino_acids;B73v2_pos=2:189521735;1allele=C/T;version=Hapmap2;RS=rs129194115;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	194780192	194780291	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:189556519;1allele=T/A;version=Hapmap2;RS=rs131971315;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	194797145	194797244	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:189573428;1allele=T/A;version=Hapmap2;RS=rs843815912;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	194821373	194821472	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:189618700;1allele=G/A;version=Hapmap2;RS=rs1062433588;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	194884112	194884211	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:189662665;1allele=C/G;version=Hapmap2;RS=rs840642511;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	194885411	194885510	.	+	.	Name=Ear_height;B73v2_pos=2:189663964;1allele=C/A;version=Hapmap2;RS=rs849609696;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	194919493	194919592	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:189697820;1allele=C/T;version=Hapmap2;RS=rs848013123;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	194958766	194958865	.	+	.	Name=Starch;B73v2_pos=2:189736619;1allele=G/C;version=Hapmap2;RS=rs276890297;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	195054581	195054680	.	+	.	Name=Height_above_ear;B73v2_pos=2:189828791;1allele=A/G;version=Hapmap2;RS=rs816595447;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	195054581	195054680	.	+	.	Name=Plant_height;B73v2_pos=2:189828791;1allele=A/G;version=Hapmap2;RS=rs816595447;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	195062412	195062511	.	+	.	Name=Total_amino_acids;B73v2_pos=2:189836622;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	195072160	195072259	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:189846370;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	195132954	195133053	.	+	.	Name=Ear_height;B73v2_pos=2:189905443;1allele=G/A;version=Hapmap2;RS=rs835237090;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	195153337	195153436	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:189925835;1allele=T/G;version=Hapmap2;RS=rs834640262;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	195250640	195250739	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:190029195;1allele=G/A;version=Hapmap2;RS=rs842281538;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	195282696	195282795	.	+	.	Name=Starch;B73v2_pos=2:190061265;1allele=G/A;version=Hapmap2;RS=rs129195244;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	195308512	195308611	.	+	.	Name=Ear_height;B73v2_pos=2:190087093;1allele=G/A;version=Hapmap2;RS=rs842911852;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	195308759	195308858	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:190087340;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	195589397	195589496	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:190337387;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	195608773	195608872	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:190398768;1allele=A/G;version=Hapmap2;RS=rs841134076;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	195609347	195609446	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:190399342;1allele=G/A;version=Hapmap2;RS=rs842434258;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	195609351	195609450	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:190399346;1allele=C/T;version=Hapmap2;RS=rs824530595;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	195624877	195624976	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:190412864;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	195669185	195669284	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:190464911;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	195748374	195748473	.	+	.	Name=Tassel_length;B73v2_pos=2:190543059;1allele=A/G;version=Hapmap2;RS=rs821671096;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	196804673	196804772	.	+	.	Name=Ear_height;B73v2_pos=2:190864043;1allele=G/A;version=Hapmap2;RS=rs823026845;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	197032515	197032614	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:191113373;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	197075963	197076062	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:191067012;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	197165144	197165243	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:191216349;1allele=A/G;version=Hapmap2;RS=rs833796707;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	197319475	197319574	.	+	.	Name=Ear_height;B73v2_pos=2:191353207;1allele=C/A;version=Hapmap1;RS=rs131972951;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	197346672	197346771	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:191380406;1allele=C/G;version=Hapmap1;RS=rs131973027;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	197706208	197706307	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:191748942;1allele=C/A;version=Hapmap2;RS=rs835094585;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	197815212	197815311	.	+	.	Name=Ear_height;B73v2_pos=2:191860004;1allele=/GTCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	198081447	198081546	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:192126534;1allele=A/G;version=Hapmap2;RS=rs129196734;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	198087168	198087267	.	+	.	Name=Ear_height;B73v2_pos=2:192132255;1allele=G/C;version=Hapmap2;RS=rs276892465;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	198216579	198216678	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:192264691;1allele=G/A;version=Hapmap2;RS=rs846871253;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	198221030	198221129	.	+	.	Name=Leaf_length;B73v2_pos=2:192269148;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	198221619	198221718	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:192269737;1allele=C/T;version=Hapmap2;RS=rs804783062;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	198332169	198332268	.	+	.	Name=Days_to_silk;B73v2_pos=2:192374183;1allele=C/G;version=Hapmap2;RS=rs816122966;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	198332169	198332268	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:192374183;1allele=C/G;version=Hapmap2;RS=rs816122966;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	198368202	198368301	.	+	.	Name=Days_to_silk;B73v2_pos=2:192409876;1allele=T/G;version=Hapmap2;RS=rs129197061;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	198369672	198369771	.	+	.	Name=Tassel_length;B73v2_pos=2:192411346;1allele=T/A;version=Hapmap2;RS=rs818127187;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	198390272	198390371	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:192431886;1allele=A/G;version=Hapmap2;RS=rs276892949;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	198401881	198401980	.	+	.	Name=Ear_height;B73v2_pos=2:192443495;1allele=A/C;version=Hapmap2;RS=rs131973975;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	198405695	198405794	.	+	.	Name=Ear_height;B73v2_pos=2:192447309;1allele=T/C;version=Hapmap2;RS=rs814403040;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	198405951	198406050	.	+	.	Name=Ear_height;B73v2_pos=2:192447565;1allele=C/T;version=Hapmap2;RS=rs845032375;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	198412152	198412251	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:192453766;1allele=T/G;version=Hapmap2;RS=rs828130210;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	198471103	198471202	.	+	.	Name=Ear_height;B73v2_pos=2:192518455;1allele=T/C;version=Hapmap2;RS=rs829975689;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	198565673	198565772	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:192614752;1allele=T/C;version=Hapmap2;RS=rs129197459;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	198646036	198646135	.	+	.	Name=Plant_height;B73v2_pos=2:192700879;1allele=A/G;version=Hapmap2;RS=rs829617711;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	198648618	198648717	.	+	.	Name=Plant_height;B73v2_pos=2:192703461;1allele=A/C;version=Hapmap2;RS=rs816964071;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	198675317	198675416	.	+	.	Name=Plant_height;B73v2_pos=2:192730160;1allele=C/A;version=Hapmap2;RS=rs812343201;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	198692983	198693082	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:192747827;1allele=C/T;version=Hapmap2;RS=rs131974179;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	198709802	198709901	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:192764647;1allele=C/T;version=Hapmap2;RS=rs276893302;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	199057851	199057950	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:192963263;1allele=C/T;version=Hapmap2;RS=rs816963573;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	199125931	199126030	.	+	.	Name=Plant_height;B73v2_pos=2:193094945;1allele=C/T;version=Hapmap2;RS=rs832533650;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	199159462	199159561	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193126432;1allele=C/T;version=Hapmap2;RS=rs847372080;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	199179654	199179753	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:193146631;1allele=C/T;version=Hapmap2;RS=rs816939381;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	199211358	199211457	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193188817;1allele=C/T;version=Hapmap2;RS=rs811607891;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	199235382	199235481	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:193201078;1allele=G/T;version=Hapmap2;RS=rs839918467;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	199243386	199243485	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193209082;1allele=G/A;version=Hapmap2;RS=rs828963050;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	199320816	199320915	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193278354;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	199341280	199341379	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193298820;1allele=G/A;version=Hapmap2;RS=rs848095785;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	199520239	199520338	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193477265;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	199616265	199616364	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:193573117;1allele=A/G;version=Hapmap2;RS=rs1060784925;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	199677357	199677456	.	+	.	Name=Stalk_strength;B73v2_pos=2:193619926;1allele=T/C;version=Hapmap2;RS=rs131974885;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	199787865	199787964	.	+	.	Name=Ear_height;B73v2_pos=2:193727576;1allele=A/G;version=Hapmap2;RS=rs820260335;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	199794018	199794117	.	+	.	Name=Height_above_ear;B73v2_pos=2:193733731;1allele=G/A;version=Hapmap2;RS=rs834321781;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	199881016	199881115	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:193841149;1allele=G/C;version=Hapmap2;RS=rs814875022;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	199899208	199899307	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:193828528;1allele=T/C;version=Hapmap2;RS=rs848945886;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	199899740	199899839	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:193829060;1allele=A/G;version=Hapmap2;RS=rs803797197;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	199900534	199900633	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:193829854;1allele=C/A;version=Hapmap2;RS=rs129198350;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	199902093	199902192	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:193831413;1allele=T/C;version=Hapmap2;RS=rs129198364;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	199967165	199967264	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193884023;1allele=A/T;version=Hapmap2;RS=rs1061594514;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	200002100	200002199	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:193918852;1allele=A/C;version=Hapmap2;RS=rs129198529;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	200083101	200083200	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:193999853;1allele=C/T;version=Hapmap2;RS=rs841601412;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200119796	200119895	.	+	.	Name=Leaf_length;B73v2_pos=2:194037420;1allele=G/A;version=Hapmap2;RS=rs131178290;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	200120138	200120237	.	+	.	Name=Leaf_length;B73v2_pos=2:194037762;1allele=T/G;version=Hapmap2;RS=rs131975378;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	200226666	200226764	.	+	.	Name=Days_to_silk;B73v2_pos=2:194111460;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	200229476	200229575	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:194114271;1allele=C/T;version=Hapmap2;RS=rs1062606027;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200260541	200260640	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:194158194;1allele=C/T;version=Hapmap2;RS=rs815819615;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200260541	200260640	.	+	.	Name=Plant_height;B73v2_pos=2:194158194;1allele=C/T;version=Hapmap2;RS=rs815819615;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200260541	200260640	.	+	.	Name=Ear_height;B73v2_pos=2:194158194;1allele=C/T;version=Hapmap2;RS=rs815819615;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200260541	200260640	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194158194;1allele=C/T;version=Hapmap2;RS=rs815819615;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200261461	200261560	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:194159114;1allele=C/A;version=Hapmap2;RS=rs807220702;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	200262101	200262200	.	+	.	Name=Ear_height;B73v2_pos=2:194159754;1allele=G/A;version=Hapmap2;RS=rs842769629;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	200262209	200262308	.	+	.	Name=Ear_height;B73v2_pos=2:194159862;1allele=A/G;version=Hapmap2;RS=rs849680428;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	200263132	200263231	.	+	.	Name=Ear_height;B73v2_pos=2:194160785;1allele=T/G;version=Hapmap2;RS=rs725733564;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	200263132	200263231	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:194160785;1allele=T/G;version=Hapmap2;RS=rs725733564;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	200263132	200263231	.	+	.	Name=Plant_height;B73v2_pos=2:194160785;1allele=T/G;version=Hapmap2;RS=rs725733564;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	200264692	200264791	.	+	.	Name=Ear_height;B73v2_pos=2:194162345;1allele=CAT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	200266667	200266766	.	+	.	Name=Ear_height;B73v2_pos=2:194164320;1allele=C/T;version=Hapmap2;RS=rs830865602;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200268363	200268462	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194166016;1allele=C/G;version=Hapmap2;RS=rs844489418;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	200269566	200269665	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:194167219;1allele=T/A;version=Hapmap2;RS=rs836102865;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	200269714	200269813	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:194167367;1allele=A/G;version=Hapmap2;RS=rs276895135;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	200373689	200373788	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:194291029;1allele=A/G;version=Hapmap2;RS=rs129198974;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	200380385	200380484	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:194306228;1allele=A/G;version=Hapmap2;RS=rs726507771;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	200380385	200380484	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194306228;1allele=A/G;version=Hapmap2;RS=rs726507771;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	200380385	200380484	.	+	.	Name=Plant_height;B73v2_pos=2:194306228;1allele=A/G;version=Hapmap2;RS=rs726507771;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	200397119	200397218	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194307975;1allele=T/C;version=Hapmap2;RS=rs725900094;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	200397694	200397793	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:194308550;1allele=G/A;version=Hapmap2;RS=rs726747329;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	200397961	200398060	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194308817;1allele=C/T;version=Hapmap1;RS=rs131975643;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200398038	200398137	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194308894;1allele=T/C;version=Hapmap1;RS=rs131975645;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	200398599	200398698	.	+	.	Name=Cob_diameter;B73v2_pos=2:194309455;1allele=C/A;version=Hapmap2;RS=rs276895287;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	200418663	200418762	.	+	.	Name=Days_to_silk;B73v2_pos=2:194329689;1allele=A/T;version=Hapmap2;RS=rs129198989;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	200418663	200418762	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:194329689;1allele=A/T;version=Hapmap2;RS=rs129198989;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	200453550	200453649	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:194359581;1allele=G/A;version=Hapmap1;RS=rs129199009;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200456302	200456401	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:194362333;1allele=T/C;version=Hapmap2;RS=rs276895381;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	200459127	200459226	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:194365160;1allele=C/T;version=Hapmap2;RS=rs807095614;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200459127	200459226	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:194365160;1allele=C/T;version=Hapmap2;RS=rs807095614;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200482617	200482716	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:194395476;1allele=A/G;version=Hapmap1;RS=rs131975708;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	200482617	200482716	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194395476;1allele=A/G;version=Hapmap1;RS=rs131975708;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	200513220	200513319	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:194415607;1allele=T/C;version=Hapmap2;RS=rs835654386;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	200513235	200513334	.	+	.	Name=Ear_height;B73v2_pos=2:194415622;1allele=C/G;version=Hapmap2;RS=rs839611048;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	200513235	200513334	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:194415622;1allele=C/G;version=Hapmap2;RS=rs839611048;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	200577895	200577994	.	+	.	Name=Plant_height;B73v2_pos=2:194480864;1allele=C/A;version=Hapmap2;RS=rs131976022;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	200577895	200577994	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:194480864;1allele=C/A;version=Hapmap2;RS=rs131976022;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	200577895	200577994	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194480864;1allele=C/A;version=Hapmap2;RS=rs131976022;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	200580638	200580737	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:194483607;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	200584594	200584693	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:194487563;1allele=G/C;version=Hapmap2;RS=rs131975934;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	200590266	200590365	.	+	.	Name=Height_above_ear;B73v2_pos=2:194493235;1allele=C/G;version=Hapmap2;RS=rs276895720;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	200594234	200594333	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:194497203;1allele=T/C;version=Hapmap2;RS=rs129199174;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	200594246	200594345	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:194497215;1allele=C/G;version=Hapmap2;RS=rs129199173;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	200660970	200661069	.	+	.	Name=Height_above_ear;B73v2_pos=2:194558906;1allele=G/A;version=Hapmap2;RS=rs830183592;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	200691570	200691669	.	+	.	Name=Height_above_ear;B73v2_pos=2:194620097;1allele=C/G;version=Hapmap2;RS=rs131976091;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	200691570	200691669	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194620097;1allele=C/G;version=Hapmap2;RS=rs131976091;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	200692832	200692931	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:194621359;1allele=T/C;version=Hapmap2;RS=rs129199293;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	200779131	200779230	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:194724509;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	200804980	200805079	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:194750969;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	200854921	200855020	.	+	.	Name=Plant_height;B73v2_pos=2:194800767;1allele=G/A;version=Hapmap1;RS=rs131976205;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	200961481	200961580	.	+	.	Name=Ear_height;B73v2_pos=2:221010879;1allele=C/T;version=Hapmap2;RS=rs842972580;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	201175304	201175403	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:220836225;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	201221390	201221489	.	+	.	Name=Height_above_ear;B73v2_pos=2:194827083;1allele=G/A;version=Hapmap2;RS=rs839896247;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201300413	201300512	.	+	.	Name=Cob_diameter;B73v2_pos=2:194905899;1allele=G/A;version=Hapmap2;RS=rs129199661;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201302937	201303037	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:194908422;1allele=T/C;version=Hapmap2;RS=rs276895976;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	201332086	201332185	.	+	.	Name=Height_above_ear;B73v2_pos=2:194936967;1allele=C/T;version=Hapmap2;RS=rs129199758;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	201367523	201367622	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:194972409;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	201436387	201436486	.	+	.	Name=Chlorophyll_B;B73v2_pos=2:195037670;1allele=G/A;version=Hapmap1;RS=rs131976512;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	201438117	201438216	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:195039401;1allele=C/T;version=Hapmap2;RS=rs825141694;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	201439564	201439663	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:195040848;1allele=T/C;version=Hapmap2;RS=rs836574396;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	201440814	201440913	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:195042098;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	201440814	201440913	.	+	.	Name=Ear_height;B73v2_pos=2:195042098;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	201442530	201442629	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:195043752;1allele=G/T;version=Hapmap2;RS=rs818248264;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	201442547	201442646	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:195043769;1allele=G/A;version=Hapmap2;RS=rs845340899;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201443152	201443251	.	+	.	Name=Ear_height;B73v2_pos=2:195044374;1allele=C/T;version=Hapmap2;RS=rs276896047;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	201455354	201455453	.	+	.	Name=Ear_height;B73v2_pos=2:195056575;1allele=C/G;version=Hapmap2;RS=rs276896083;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	201525771	201525869	.	+	.	Name=Tassel_length;B73v2_pos=2:195126101;1allele=G/A;version=Hapmap2;RS=rs841810264;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201538906	201539005	.	+	.	Name=Ear_height;B73v2_pos=2:195139243;1allele=C/G;version=Hapmap2;RS=rs819899722;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	201582402	201582501	.	+	.	Name=Cob_diameter;B73v2_pos=2:195180398;1allele=A/T;version=Hapmap2;RS=rs129200101;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	201655206	201655305	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:195253670;1allele=G/T;version=Hapmap2;RS=rs836097459;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	201678509	201678608	.	+	.	Name=Plant_height;B73v2_pos=2:195278302;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	201690108	201690207	.	+	.	Name=Tassel_length;B73v2_pos=2:195291367;1allele=T/C;version=Hapmap2;RS=rs129200349;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	201746358	201746457	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:195308000;1allele=G/A;version=Hapmap2;RS=rs834788106;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201795684	201795782	.	+	.	Name=Height_above_ear;B73v2_pos=2:195350434;1allele=C/T;version=Hapmap2;RS=rs847294159;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201796730	201796829	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:195349386;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	201822736	201822835	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:195400828;1allele=C/T;version=Hapmap2;RS=rs831631127;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	201882420	201882519	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:195448359;1allele=C/A;version=Hapmap2;RS=rs829646194;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	201931477	201931576	.	+	.	Name=Height_above_ear;B73v2_pos=2:195507222;1allele=G/A;version=Hapmap2;RS=rs836019905;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201931477	201931576	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:195507222;1allele=G/A;version=Hapmap2;RS=rs836019905;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	201940326	201940425	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:195516152;1allele=A/G;version=Hapmap2;RS=rs821062535;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	201940326	201940425	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:195516152;1allele=A/G;version=Hapmap2;RS=rs821062535;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	201941252	201941351	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:195517078;1allele=C/A;version=Hapmap2;RS=rs837453892;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	201942291	201942390	.	+	.	Name=Plant_height;B73v2_pos=2:195518113;1allele=A/G;version=Hapmap2;RS=rs809671672;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	201942291	201942390	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:195518113;1allele=A/G;version=Hapmap2;RS=rs809671672;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	201942291	201942390	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:195518113;1allele=A/G;version=Hapmap2;RS=rs809671672;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	202086361	202086460	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:195661579;1allele=C/T;version=Hapmap2;RS=rs822234926;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202088039	202088138	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:195663257;1allele=C/A;version=Hapmap2;RS=rs834124684;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	202090287	202090386	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:195665505;1allele=T/C;version=Hapmap2;RS=rs129201205;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	202137880	202137979	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:195713450;1allele=C/T;version=Hapmap2;RS=rs276896956;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202268687	202268786	.	+	.	Name=Ear_row_number;B73v2_pos=2:195839377;1allele=/GT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	202269279	202269378	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:195839969;1allele=G/A;version=Hapmap2;RS=rs808138976;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	202331901	202332000	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:195899450;1allele=A/G;version=Hapmap2;RS=rs817447851;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	202332824	202332923	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:195900373;1allele=G/A;version=Hapmap2;RS=rs805340066;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	202345876	202345975	.	+	.	Name=Starch;B73v2_pos=2:195913423;1allele=T/C;version=Hapmap2;RS=rs817114961;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	202346864	202346963	.	+	.	Name=Cob_diameter;B73v2_pos=2:195914411;1allele=C/T;version=Hapmap2;RS=rs131977306;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202357531	202357630	.	+	.	Name=Cob_diameter;B73v2_pos=2:195925452;1allele=T/C;version=Hapmap2;RS=rs1064355593;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202484671	202484770	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:196043748;1allele=A/C;version=Hapmap2;RS=rs815354062;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	202486060	202486159	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:196045137;1allele=C/T;version=Hapmap2;RS=rs1062062955;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202513937	202514036	.	+	.	Name=Cob_diameter;B73v2_pos=2:196111651;1allele=T/C;version=Hapmap2;RS=rs276897434;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	202514198	202514297	.	+	.	Name=Cob_diameter;B73v2_pos=2:196111912;1allele=C/A;version=Hapmap2;RS=rs838946902;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	202524795	202524894	.	+	.	Name=Cob_diameter;B73v2_pos=2:196089168;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	202525243	202525342	.	+	.	Name=Cob_diameter;B73v2_pos=2:196088720;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	202740299	202740398	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:196303467;1allele=C/T;version=Hapmap2;RS=rs131977655;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202740756	202740855	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:196303924;1allele=C/T;version=Hapmap2;RS=rs276897658;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202740990	202741089	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:196304158;1allele=T/C;version=Hapmap2;RS=rs131977661;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	202812502	202812601	.	+	.	Name=Tassel_length;B73v2_pos=2:196375621;1allele=G/C;version=Hapmap2;RS=rs847284116;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	202826204	202826303	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:196389324;1allele=T/C;version=Hapmap1;RS=rs131977771;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	202832404	202832503	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:196395525;1allele=G/A;version=Hapmap2;RS=rs802576062;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	202891399	202891498	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:196405977;1allele=C/T;version=Hapmap2;RS=rs812290957;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	202894439	202894538	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:196408999;1allele=T/C;version=Hapmap2;RS=rs276897869;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	202910349	202910448	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:196468397;1allele=T/C;version=Hapmap2;RS=rs839913114;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	203053735	203053834	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:196526575;1allele=G/T;version=Hapmap1;RS=rs131978003;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	203057299	203057398	.	+	.	Name=Tassel_length;B73v2_pos=2:196530139;1allele=C/T;version=Hapmap2;RS=rs724217057;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	203063761	203063860	.	+	.	Name=Cob_diameter;B73v2_pos=2:196536600;1allele=A/G;version=Hapmap2;RS=rs276898057;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	203169970	203170069	.	+	.	Name=Tassel_length;B73v2_pos=2:196645592;1allele=T/C;version=Hapmap2;RS=rs822701089;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	203290407	203290506	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:196754952;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	203316849	203316948	.	+	.	Name=Tassel_length;B73v2_pos=2:196743615;1allele=C/T;version=Hapmap2;RS=rs841377844;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	203322018	203322117	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:196789102;1allele=G/C;version=Hapmap2;RS=rs812848463;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	203322424	203322523	.	+	.	Name=Malate;B73v2_pos=2:196789508;1allele=A/G;version=Hapmap2;RS=rs276898186;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	203349882	203349981	.	+	.	Name=Tassel_length;B73v2_pos=2:196818185;1allele=T/C;version=Hapmap2;RS=rs830126241;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	203405356	203405455	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:196872783;1allele=T/A;version=Hapmap1;RS=rs129202356;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	203431623	203431722	.	+	.	Name=Days_to_silk;B73v2_pos=2:196899029;1allele=C/T;version=Hapmap2;RS=rs276898353;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	203433246	203433345	.	+	.	Name=Days_to_silk;B73v2_pos=2:196900652;1allele=T/G;version=Hapmap2;RS=rs129202388;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	203433716	203433815	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:196901122;1allele=G/C;version=Hapmap2;RS=rs813950118;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	203441076	203441175	.	+	.	Name=Days_to_silk;B73v2_pos=2:196908483;1allele=C/T;version=Hapmap1;RS=rs131978305;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	203443574	203443673	.	+	.	Name=Days_to_silk;B73v2_pos=2:196910981;1allele=A/C;version=Hapmap2;RS=rs819496880;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	203492114	203492213	.	+	.	Name=Days_to_silk;B73v2_pos=2:196949889;1allele=G/A;version=Hapmap2;RS=rs835224654;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	203492431	203492530	.	+	.	Name=Malate;B73v2_pos=2:196950206;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	203502402	203502501	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:196960178;1allele=C/T;version=Hapmap2;RS=rs813950748;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	203518000	203518099	.	+	.	Name=Days_to_silk;B73v2_pos=2:197011841;1allele=A/G;version=Hapmap2;RS=rs129202504;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	203518301	203518400	.	+	.	Name=Days_to_silk;B73v2_pos=2:197012142;1allele=G/A;version=Hapmap2;RS=rs726798065;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	203528072	203528171	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:197021913;1allele=T/C;version=Hapmap2;RS=rs822588657;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	203541826	203541925	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:197036316;1allele=C/T;version=Hapmap2;RS=rs844320442;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	203609259	203609358	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:197094537;1allele=T/A;version=Hapmap1;RS=rs131978410;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	203609854	203609953	.	+	.	Name=Cob_diameter;B73v2_pos=2:197095132;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	203609895	203609994	.	+	.	Name=Cob_diameter;B73v2_pos=2:197095173;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	203675071	203675170	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:197142198;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	203739720	203739819	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:197210275;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	203971390	203971489	.	+	.	Name=Days_to_silk;B73v2_pos=2:197443007;1allele=T/C;version=Hapmap2;RS=rs129202820;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	204005549	204005648	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:197479335;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	204702362	204702461	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:198087458;1allele=C/T;version=Hapmap2;RS=rs814172042;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	204729182	204729281	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:198114277;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	204932553	204932652	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:198316739;1allele=G/A;version=Hapmap2;RS=rs826734522;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	204932593	204932692	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:198316779;1allele=C/T;version=Hapmap2;RS=rs812362133;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	204933748	204933847	.	+	.	Name=Height_above_ear;B73v2_pos=2:198317934;1allele=C/T;version=Hapmap2;RS=rs804910635;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205010524	205010623	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:198394997;1allele=C/G;version=Hapmap2;RS=rs129203694;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	205013392	205013491	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:198397865;1allele=T/A;version=Hapmap2;RS=rs129203703;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	205076304	205076403	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:198449423;1allele=G/A;version=Hapmap2;RS=rs826545115;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205090357	205090456	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:198463475;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205093898	205093997	.	+	.	Name=Cob_diameter;B73v2_pos=2:198471695;1allele=C/T;version=Hapmap2;RS=rs830491383;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205095636	205095735	.	+	.	Name=Cob_diameter;B73v2_pos=2:198474179;1allele=A/G;version=Hapmap2;RS=rs1063106804;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205153976	205154075	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:198531814;1allele=C/T;version=Hapmap2;RS=rs801673904;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205196059	205196158	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:198575908;1allele=C/T;version=Hapmap2;RS=rs837221133;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205199291	205199390	.	+	.	Name=Cob_diameter;B73v2_pos=2:198579140;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205199955	205200054	.	+	.	Name=Cob_diameter;B73v2_pos=2:198579804;1allele=A/G;version=Hapmap2;RS=rs1061149444;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205206310	205206409	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:198586119;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205277835	205277934	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:198653902;1allele=C/T;version=Hapmap2;RS=rs129204365;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205280299	205280398	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:198656366;1allele=A/T;version=Hapmap2;RS=rs129204378;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	205315384	205315483	.	+	.	Name=Plant_height;B73v2_pos=2:198691623;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205334360	205334459	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:198709258;1allele=G/A;version=Hapmap2;RS=rs276899962;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205334454	205334553	.	+	.	Name=Fructose;B73v2_pos=2:198709352;1allele=G/A;version=Hapmap2;RS=rs129204564;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205402537	205402636	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:198775985;1allele=C/T;version=Hapmap2;RS=rs838587091;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205420424	205420523	.	+	.	Name=Tassel_length;B73v2_pos=2:198793876;1allele=A/G;version=Hapmap2;RS=rs824823980;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205456668	205456767	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:198832165;1allele=G/A;version=Hapmap2;RS=rs836001920;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205472074	205472173	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:198887268;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205526191	205526290	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:198896731;1allele=A/G;version=Hapmap2;RS=rs805479019;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205535449	205535548	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:198905917;1allele=G/A;version=Hapmap2;RS=rs847312846;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205554419	205554518	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:198924889;1allele=A/C;version=Hapmap2;RS=rs276900301;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	205554914	205555013	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:198925384;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205554915	205555014	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:198925385;1allele=A/G;version=Hapmap2;RS=rs276900315;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205557489	205557588	.	+	.	Name=Cob_diameter;B73v2_pos=2:198927959;1allele=T/G;version=Hapmap2;RS=rs276900348;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	205578336	205578435	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:198948807;1allele=A/G;version=Hapmap2;RS=rs814430506;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205598281	205598380	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:198968754;1allele=C/T;version=Hapmap2;RS=rs129205077;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205598558	205598657	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:198969031;1allele=C/T;version=Hapmap2;RS=rs129205079;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205598558	205598657	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:198969031;1allele=C/T;version=Hapmap2;RS=rs129205079;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205599459	205599558	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:198969932;1allele=T/C;version=Hapmap2;RS=rs724938491;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	205685622	205685721	.	+	.	Name=Leaf_length;B73v2_pos=2:199077149;1allele=T/C;version=Hapmap2;RS=rs276900659;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	205686623	205686722	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:199078152;1allele=G/A;version=Hapmap2;RS=rs817912020;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205703033	205703132	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:199093464;1allele=C/T;version=Hapmap2;RS=rs816482742;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205768018	205768117	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:199154792;1allele=G/C;version=Hapmap2;RS=rs276900750;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	205780338	205780437	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:199167089;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205784698	205784797	.	+	.	Name=Cob_diameter;B73v2_pos=2:199171450;1allele=C/T;version=Hapmap2;RS=rs818528418;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	205786131	205786230	.	+	.	Name=Plant_height;B73v2_pos=2:199172883;1allele=A/G;version=Hapmap1;RS=rs131980294;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205788707	205788806	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:199175458;1allele=A/G;version=Hapmap2;RS=rs129205307;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	205788825	205788924	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:199175576;1allele=C/T;version=Hapmap2;RS=rs131980354;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205790798	205790897	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:199177549;1allele=G/T;version=Hapmap2;RS=rs823671471;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	205792326	205792425	.	+	.	Name=Tassel_length;B73v2_pos=2:199179278;1allele=A/G;version=Hapmap2;RS=rs806809674;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205819974	205820073	.	+	.	Name=Height_above_ear;B73v2_pos=2:199206928;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205840875	205840974	.	+	.	Name=Height_above_ear;B73v2_pos=2:199246570;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	205950782	205950881	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:199337208;1allele=T/C;version=Hapmap2;RS=rs807092789;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	205959930	205960029	.	+	.	Name=Days_to_silk;B73v2_pos=2:199346356;1allele=A/G;version=Hapmap2;RS=rs814344805;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205959930	205960029	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:199346356;1allele=A/G;version=Hapmap2;RS=rs814344805;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205960006	205960105	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:199346432;1allele=G/A;version=Hapmap1;RS=rs131980559;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205960006	205960105	.	+	.	Name=Days_to_silk;B73v2_pos=2:199346432;1allele=G/A;version=Hapmap2;RS=rs131980559;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	205960017	205960116	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:199346443;1allele=C/T;version=Hapmap2;RS=rs838678677;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205962592	205962691	.	+	.	Name=Height_above_ear;B73v2_pos=2:199349018;1allele=G/C;version=Hapmap1;RS=rs131980592;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	205980096	205980195	.	+	.	Name=Leaf_length;B73v2_pos=2:199366524;1allele=A/G;version=Hapmap2;RS=rs129205485;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	205980984	205981083	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:199367412;1allele=C/T;version=Hapmap2;RS=rs850406235;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	205996541	205996640	.	+	.	Name=Cob_diameter;B73v2_pos=2:199385980;1allele=C/G;version=Hapmap2;RS=rs836446518;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	206000563	206000662	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:199389928;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	206003075	206003174	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:199392440;1allele=A/G;version=Hapmap2;RS=rs819571286;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	206050681	206050780	.	+	.	Name=Height_above_ear;B73v2_pos=2:199451270;1allele=A/T;version=Hapmap2;RS=rs276901163;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	206052537	206052636	.	+	.	Name=Height_above_ear;B73v2_pos=2:199453126;1allele=A/G;version=Hapmap2;RS=rs727397211;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	206102397	206102496	.	+	.	Name=Height_above_ear;B73v2_pos=2:199502990;1allele=G/A;version=Hapmap2;RS=rs834042681;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	206153678	206153777	.	+	.	Name=Leaf_length;B73v2_pos=2:199554282;1allele=A/G;version=Hapmap2;RS=rs802104864;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	206161955	206162054	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:199562560;1allele=T/C;version=Hapmap1;RS=rs830044635;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	206164092	206164191	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:199564697;1allele=G/C;version=Hapmap2;RS=rs833894615;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	206203795	206203894	.	+	.	Name=Starch;B73v2_pos=2:199604337;1allele=T/G;version=Hapmap2;RS=rs129205973;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	206250012	206250111	.	+	.	Name=Starch;B73v2_pos=2:199651596;1allele=C/T;version=Hapmap2;RS=rs129206051;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	206275352	206275451	.	+	.	Name=Starch;B73v2_pos=2:199676935;1allele=C/T;version=Hapmap2;RS=rs129206242;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	206279289	206279388	.	+	.	Name=Height_above_ear;B73v2_pos=2:199680872;1allele=C/A;version=Hapmap1;RS=rs276902120;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	206686234	206686333	.	+	.	Name=Cob_diameter;B73v2_pos=2:200090656;1allele=C/T;version=Hapmap1;RS=rs129206917;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	207127917	207128016	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:200520099;1allele=T/C;version=Hapmap2;RS=rs849849701;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	207141974	207142073	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:200534156;1allele=C/T;version=Hapmap2;RS=rs1064334381;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	207142540	207142639	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:200534722;1allele=G/T;version=Hapmap2;RS=rs838587859;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	207144875	207144974	.	+	.	Name=Tassel_length;B73v2_pos=2:200537057;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	207228295	207228394	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:200622131;1allele=G/T;version=Hapmap2;RS=rs804608296;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	207372170	207372269	.	+	.	Name=Leaf_length;B73v2_pos=2:200791539;1allele=C/G;version=Hapmap2;RS=rs129207816;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	207844700	207844799	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:201205938;1allele=A/G;version=Hapmap2;RS=rs129208369;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	207950777	207950876	.	+	.	Name=Height_above_ear;B73v2_pos=2:201311291;1allele=T/C;version=Hapmap2;RS=rs726431433;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	207960609	207960708	.	+	.	Name=Stalk_strength;B73v2_pos=2:201321123;1allele=G/T;version=Hapmap2;RS=rs1060564025;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	207966390	207966489	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:201326907;1allele=C/A;version=Hapmap2;RS=rs725914938;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	207982800	207982899	.	+	.	Name=Stalk_strength;B73v2_pos=2:201343318;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	208032845	208032944	.	+	.	Name=Days_to_silk;B73v2_pos=2:201390389;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	208049169	208049268	.	+	.	Name=Height_above_ear;B73v2_pos=2:201406716;1allele=G/A;version=Hapmap2;RS=rs840640864;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	208203356	208203455	.	+	.	Name=Height_above_ear;B73v2_pos=2:201563032;1allele=T/A;version=Hapmap2;RS=rs816371896;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	208367384	208367483	.	+	.	Name=Days_to_silk;B73v2_pos=2:201726559;1allele=G/A;version=Hapmap2;RS=rs841566089;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	208388911	208389010	.	+	.	Name=Cob_diameter;B73v2_pos=2:201748087;1allele=G/A;version=Hapmap2;RS=rs129209092;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	208495648	208495747	.	+	.	Name=Height_above_ear;B73v2_pos=2:201845935;1allele=C/T;version=Hapmap2;RS=rs842451119;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	208528288	208528387	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:201879840;1allele=C/T;version=Hapmap2;RS=rs806392920;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	208528296	208528395	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:201879848;1allele=T/A;version=Hapmap2;RS=rs834119410;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	208794270	208794369	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:202148289;1allele=A/G;version=Hapmap2;RS=rs806738353;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	208805832	208805931	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:202159845;1allele=A/G;version=Hapmap2;RS=rs834087761;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	208805845	208805944	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:202159858;1allele=G/A;version=Hapmap2;RS=rs839398216;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	208867833	208867932	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:202246505;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	208929608	208929707	.	+	.	Name=Days_to_silk;B73v2_pos=2:202282543;1allele=C/T;version=Hapmap2;RS=rs838482399;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	208949348	208949447	.	+	.	Name=Cob_diameter;B73v2_pos=2:202302280;1allele=A/G;version=Hapmap2;RS=rs129209803;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	208953251	208953350	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:202306183;1allele=T/C;version=Hapmap2;RS=rs129209814;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	208957716	208957815	.	+	.	Name=Cob_diameter;B73v2_pos=2:202310648;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	208958012	208958111	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:202310944;1allele=T/G;version=Hapmap2;RS=rs129209835;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	208994995	208995094	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:202344303;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	208995688	208995787	.	+	.	Name=Cob_diameter;B73v2_pos=2:202343610;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	208997903	208998002	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:202341395;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	209049697	209049796	.	+	.	Name=Height_above_ear;B73v2_pos=2:202402885;1allele=G/C;version=Hapmap2;RS=rs276905125;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	209286162	209286261	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:202641741;1allele=C/A;version=Hapmap1;RS=rs131982606;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	209286283	209286382	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:202641862;1allele=G/C;version=Hapmap1;RS=rs131982614;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	209288540	209288639	.	+	.	Name=Cob_diameter;B73v2_pos=2:202644119;1allele=G/C;version=Hapmap1;RS=rs129210048;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	209313536	209313635	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:202669327;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	209315000	209315099	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:202670791;1allele=C/T;version=Hapmap1;RS=rs814381311;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209368304	209368403	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:202724111;1allele=C/T;version=Hapmap2;RS=rs803492083;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209370250	209370349	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:202726059;1allele=C/T;version=Hapmap2;RS=rs829870007;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209372162	209372261	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:202727971;1allele=C/G;version=Hapmap1;RS=rs131982700;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	209372399	209372498	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:202728208;1allele=A/G;version=Hapmap1;RS=rs724866020;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	209373021	209373120	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:202728830;1allele=A/T;version=Hapmap2;RS=rs129210086;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	209395150	209395249	.	+	.	Name=Days_to_silk;B73v2_pos=2:202750959;1allele=C/T;version=Hapmap2;RS=rs802132520;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209441557	209441656	.	+	.	Name=Cob_diameter;B73v2_pos=2:202779494;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	209561377	209561476	.	+	.	Name=Ear_row_number;B73v2_pos=2:202916683;1allele=A/G;version=Hapmap2;RS=rs823878930;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	209734394	209734493	.	+	.	Name=Days_to_silk;B73v2_pos=2:203089529;1allele=T/G;version=Hapmap2;RS=rs831967260;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209737339	209737438	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:203086584;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	209737560	209737659	.	+	.	Name=Days_to_silk;B73v2_pos=2:203086363;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	209824964	209825063	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:203151444;1allele=A/T;version=Hapmap2;RS=rs826347380;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	209825085	209825184	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:203151565;1allele=A/G;version=Hapmap2;RS=rs840334386;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	209826242	209826341	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:203152722;1allele=C/G;version=Hapmap2;RS=rs1060846442;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	209826508	209826607	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:203152988;1allele=A/T;version=Hapmap2;RS=rs837942238;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	209827000	209827099	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:203153480;1allele=A/T;version=Hapmap2;RS=rs131982930;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	209847140	209847239	.	+	.	Name=Days_to_silk;B73v2_pos=2:203226886;1allele=T/C;version=Hapmap2;RS=rs826270192;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	209862546	209862645	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:203242657;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	209870992	209871091	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:203251140;1allele=G/A;version=Hapmap2;RS=rs824039242;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	209871083	209871182	.	+	.	Name=Days_to_silk;B73v2_pos=2:203251231;1allele=C/T;version=Hapmap2;RS=rs836847936;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209871108	209871207	.	+	.	Name=Days_to_silk;B73v2_pos=2:203251256;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	209872325	209872424	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:203252473;1allele=C/T;version=Hapmap2;RS=rs806838705;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209872345	209872444	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:203252493;1allele=G/C;version=Hapmap2;RS=rs841101584;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	209881187	209881286	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:203261339;1allele=C/T;version=Hapmap2;RS=rs131983223;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	209883386	209883485	.	+	.	Name=Cob_diameter;B73v2_pos=2:203263538;1allele=G/C;version=Hapmap1;RS=rs129210718;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	210142304	210142403	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:203518339;1allele=C/A;version=Hapmap2;RS=rs276906203;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	210147731	210147830	.	+	.	Name=Leaf_length;B73v2_pos=2:203523768;1allele=C/G;version=Hapmap2;RS=rs835201565;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	210156739	210156838	.	+	.	Name=Cob_diameter;B73v2_pos=2:203532776;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210220411	210220510	.	+	.	Name=Days_to_silk;B73v2_pos=2:203599001;1allele=T/G;version=Hapmap2;RS=rs841432252;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	210234006	210234105	.	+	.	Name=Days_to_silk;B73v2_pos=2:203612596;1allele=/ATCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210237912	210238011	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:203616502;1allele=G/A;version=Hapmap2;RS=rs809830253;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	210252696	210252795	.	+	.	Name=Cob_diameter;B73v2_pos=2:203631281;1allele=C/G;version=Hapmap2;RS=rs129211413;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	210397217	210397316	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:203773175;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210444398	210444497	.	+	.	Name=Height_above_ear;B73v2_pos=2:203838768;1allele=C/T;version=Hapmap2;RS=rs847544770;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210555509	210555608	.	+	.	Name=Leaf_length;B73v2_pos=2:203944980;1allele=A/G;version=Hapmap2;RS=rs129211848;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	210556834	210556933	.	+	.	Name=Height_above_ear;B73v2_pos=2:203946305;1allele=A/G;version=Hapmap2;RS=rs842498484;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	210556986	210557085	.	+	.	Name=Plant_height;B73v2_pos=2:203946457;1allele=G/A;version=Hapmap2;RS=rs829833232;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	210557085	210557184	.	+	.	Name=Height_above_ear;B73v2_pos=2:203946556;1allele=C/T;version=Hapmap2;RS=rs276906815;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210557544	210557643	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:203947015;1allele=C/T;version=Hapmap2;RS=rs841647340;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210557544	210557643	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:203947015;1allele=C/T;version=Hapmap2;RS=rs841647340;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210560282	210560381	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:203949753;1allele=T/G;version=Hapmap2;RS=rs808673154;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	210560282	210560381	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:203949753;1allele=T/G;version=Hapmap2;RS=rs808673154;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	210560285	210560384	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:203949756;1allele=T/C;version=Hapmap2;RS=rs814106251;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	210563288	210563387	.	+	.	Name=Height_above_ear;B73v2_pos=2:203952759;1allele=C/G;version=Hapmap2;RS=rs812558791;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210614794	210614893	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:204004961;1allele=C/T;version=Hapmap2;RS=rs848092347;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210636758	210636857	.	+	.	Name=Height_above_ear;B73v2_pos=2:204026923;1allele=G/A;version=Hapmap2;RS=rs846977924;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	210674672	210674771	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204078311;1allele=C/T;version=Hapmap2;RS=rs276907142;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	210750166	210750265	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:204170965;1allele=G/A;version=Hapmap2;RS=rs831918603;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	210778571	210778670	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:204184848;1allele=T/C;version=Hapmap2;RS=rs818773099;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	210824707	210824806	.	+	.	Name=Cob_diameter;B73v2_pos=2:204234929;1allele=A/T;version=Hapmap2;RS=rs131984573;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	210826323	210826422	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:204236545;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210826848	210826947	.	+	.	Name=Malate;B73v2_pos=2:204237070;1allele=+/-;version=Hapmap2;RS=rs816243178;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	210827827	210827926	.	+	.	Name=Cob_diameter;B73v2_pos=2:204238049;1allele=A/C;version=Hapmap1;RS=rs827878909;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	210836410	210836509	.	+	.	Name=Malate;B73v2_pos=2:204246634;1allele=A/C;version=Hapmap2;RS=rs829474220;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	210865795	210865894	.	+	.	Name=Leaf_length;B73v2_pos=2:204287255;1allele=T/G;version=Hapmap2;RS=rs839101199;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	210866124	210866223	.	+	.	Name=Leaf_length;B73v2_pos=2:204287584;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210867122	210867221	.	+	.	Name=Days_to_silk;B73v2_pos=2:204288582;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210869550	210869649	.	+	.	Name=Leaf_length;B73v2_pos=2:204291010;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210869631	210869730	.	+	.	Name=Leaf_length;B73v2_pos=2:204291091;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	210888961	210889060	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204310421;1allele=G/T;version=Hapmap2;RS=rs832797599;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	210889092	210889191	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:204310552;1allele=C/A;version=Hapmap2;RS=rs276907521;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	210889092	210889191	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:204310552;1allele=C/A;version=Hapmap2;RS=rs276907521;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	210889224	210889323	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204310684;1allele=C/T;version=Hapmap2;RS=rs846074625;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210889364	210889463	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204310824;1allele=A/C;version=Hapmap2;RS=rs809175977;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	210890408	210890507	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204311868;1allele=C/G;version=Hapmap2;RS=rs849625283;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	210890711	210890810	.	+	.	Name=Tassel_length;B73v2_pos=2:204312171;1allele=C/A;version=Hapmap2;RS=rs821297774;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	210903687	210903786	.	+	.	Name=Height_above_ear;B73v2_pos=2:204325147;1allele=C/T;version=Hapmap2;RS=rs725917157;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210903994	210904093	.	+	.	Name=Height_above_ear;B73v2_pos=2:204325454;1allele=C/T;version=Hapmap2;RS=rs844526557;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	210916965	210917064	.	+	.	Name=Days_to_silk;B73v2_pos=2:204338425;1allele=G/A;version=Hapmap2;RS=rs818833668;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	210917580	210917679	.	+	.	Name=Days_to_silk;B73v2_pos=2:204339040;1allele=C/G;version=Hapmap2;RS=rs805595978;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	210917703	210917802	.	+	.	Name=Days_to_silk;B73v2_pos=2:204339163;1allele=G/A;version=Hapmap2;RS=rs804304431;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	210921564	210921663	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:204343024;1allele=G/A;version=Hapmap2;RS=rs801585011;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	210938035	210938134	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204360782;1allele=A/-;version=Hapmap1;RS=rs131984766;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	210999759	210999858	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:204421712;1allele=T/G;version=Hapmap2;RS=rs813615532;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	211004293	211004392	.	+	.	Name=Leaf_length;B73v2_pos=2:204426247;1allele=C/T;version=Hapmap2;RS=rs129212392;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	211004675	211004774	.	+	.	Name=Tassel_length;B73v2_pos=2:204426629;1allele=A/T;version=Hapmap2;RS=rs129212395;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	211043140	211043239	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204465164;1allele=A/G;version=Hapmap2;RS=rs276907662;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	211043255	211043354	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204465279;1allele=T/C;version=Hapmap2;RS=rs276907663;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	211045613	211045712	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204467637;1allele=C/T;version=Hapmap2;RS=rs129212431;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	211062145	211062244	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:204484172;1allele=G/A;version=Hapmap2;RS=rs818176644;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	211062145	211062244	.	+	.	Name=Height_above_ear;B73v2_pos=2:204484172;1allele=G/A;version=Hapmap2;RS=rs818176644;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	211160827	211160926	.	+	.	Name=Cob_diameter;B73v2_pos=2:204559054;1allele=C/G;version=Hapmap2;RS=rs820445280;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	211169367	211169466	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:204567596;1allele=T/A;version=Hapmap2;RS=rs803242218;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	211204265	211204364	.	+	.	Name=Leaf_length;B73v2_pos=2:204601632;1allele=A/G;version=Hapmap2;RS=rs838678183;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	211226987	211227086	.	+	.	Name=Leaf_length;B73v2_pos=2:204624355;1allele=T/G;version=Hapmap2;RS=rs276907942;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	211267374	211267473	.	+	.	Name=Cob_diameter;B73v2_pos=2:204659915;1allele=ACGGGC/;version=Hapmap1;RS=rs129212782;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	211267958	211268057	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:204660499;1allele=A/C;version=Hapmap2;RS=rs276907994;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	211268029	211268128	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:204660570;1allele=A/C;version=Hapmap2;RS=rs726901086;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	211384247	211384346	.	+	.	Name=Starch;B73v2_pos=2:204757522;1allele=A/G;version=Hapmap2;RS=rs276908145;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	211399221	211399320	.	+	.	Name=Leaf_width;B73v2_pos=2:204772496;1allele=C/T;version=Hapmap2;RS=rs835630434;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	211399227	211399326	.	+	.	Name=Leaf_width;B73v2_pos=2:204772502;1allele=C/A;version=Hapmap2;RS=rs837385624;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	211400423	211400522	.	+	.	Name=Leaf_width;B73v2_pos=2:204773698;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	211403354	211403453	.	+	.	Name=Tassel_length;B73v2_pos=2:204776629;1allele=T/G;version=Hapmap2;RS=rs803163563;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	211404604	211404703	.	+	.	Name=Height_above_ear;B73v2_pos=2:204777879;1allele=C/A;version=Hapmap2;RS=rs129212926;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	211404815	211404914	.	+	.	Name=Days_to_silk;B73v2_pos=2:204778090;1allele=A/G;version=Hapmap2;RS=rs823459833;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	211449519	211449618	.	+	.	Name=Leaf_length;B73v2_pos=2:204754803;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	211450073	211450172	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:204754249;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	211483991	211484090	.	+	.	Name=Days_to_silk;B73v2_pos=2:204875257;1allele=A/G;version=Hapmap2;RS=rs276908290;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	211489688	211489787	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:204880954;1allele=T/A;version=Hapmap2;RS=rs811806029;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	211495143	211495242	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204886409;1allele=A/T;version=Hapmap2;RS=rs837906499;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	211565219	211565318	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:204956538;1allele=A/G;version=Hapmap2;RS=rs1063199851;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	211595560	211595659	.	+	.	Name=Leaf_length;B73v2_pos=2:204976825;1allele=C/G;version=Hapmap1;RS=rs131985470;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	211640897	211640996	.	+	.	Name=Leaf_width;B73v2_pos=2:205036904;1allele=A/G;version=Hapmap2;RS=rs809435678;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	211641203	211641302	.	+	.	Name=Leaf_width;B73v2_pos=2:205037210;1allele=G/A;version=Hapmap2;RS=rs807223138;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	211641798	211641897	.	+	.	Name=Leaf_width;B73v2_pos=2:205037805;1allele=C/T;version=Hapmap2;RS=rs833548974;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	211641961	211642060	.	+	.	Name=Ear_row_number;B73v2_pos=2:205037968;1allele=T/A;version=Hapmap2;RS=rs840190138;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	211642114	211642213	.	+	.	Name=Leaf_width;B73v2_pos=2:205038121;1allele=C/T;version=Hapmap2;RS=rs810880480;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212561107	212561206	.	+	.	Name=Height_above_ear;B73v2_pos=2:205720273;1allele=C/T;version=Hapmap2;RS=rs276908795;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	212561115	212561214	.	+	.	Name=Stalk_strength;B73v2_pos=2:205720281;1allele=T/C;version=Hapmap2;RS=rs816603350;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	212614302	212614401	.	+	.	Name=Tassel_length;B73v2_pos=2:205774387;1allele=C/T;version=Hapmap2;RS=rs848271311;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	212619760	212619859	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:205778546;1allele=C/T;version=Hapmap1;RS=rs131178307;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212642292	212642391	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:205801202;1allele=C/A;version=Hapmap1;RS=rs131986069;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212660280	212660379	.	+	.	Name=Ear_height;B73v2_pos=2:205817875;1allele=G/A;version=Hapmap2;RS=rs828295722;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	212679081	212679180	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:205836679;1allele=C/G;version=Hapmap2;RS=rs276908955;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	212679923	212680022	.	+	.	Name=Height_above_ear;B73v2_pos=2:205837521;1allele=/TTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212679923	212680022	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:205837521;1allele=/TTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212679955	212680054	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:205837553;1allele=C/G;version=Hapmap2;RS=rs131986127;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212681079	212681178	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:205838677;1allele=A/C;version=Hapmap2;RS=rs276908977;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	212682096	212682195	.	+	.	Name=Height_above_ear;B73v2_pos=2:205839694;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212684590	212684689	.	+	.	Name=Height_above_ear;B73v2_pos=2:205842188;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212685638	212685737	.	+	.	Name=Height_above_ear;B73v2_pos=2:205843236;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212686015	212686114	.	+	.	Name=Tassel_length;B73v2_pos=2:205843613;1allele=A/G;version=Hapmap2;RS=rs847502656;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	212686155	212686254	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:205843753;1allele=T/A;version=Hapmap2;RS=rs276908983;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	212686244	212686343	.	+	.	Name=Height_above_ear;B73v2_pos=2:205843842;1allele=G/A;version=Hapmap2;RS=rs276908985;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	212686244	212686343	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:205843842;1allele=G/A;version=Hapmap2;RS=rs276908985;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	212687483	212687582	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:205845081;1allele=G/C;version=Hapmap1;RS=rs131986183;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	212687521	212687620	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:205845119;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212688499	212688598	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:205846097;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212691112	212691211	.	+	.	Name=Plant_height;B73v2_pos=2:205848710;1allele=G/A;version=Hapmap2;RS=rs805842593;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	212691684	212691783	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:205849282;1allele=T/C;version=Hapmap2;RS=rs815568941;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	212692243	212692342	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:205849841;1allele=T/C;version=Hapmap2;RS=rs276909016;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212692243	212692342	.	+	.	Name=Plant_height;B73v2_pos=2:205849841;1allele=T/C;version=Hapmap2;RS=rs276909016;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212742616	212742715	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:205901132;1allele=A/G;version=Hapmap2;RS=rs831601455;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	212746487	212746586	.	+	.	Name=Height_above_ear;B73v2_pos=2:205905003;1allele=T/G;version=Hapmap2;RS=rs276909072;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	212746487	212746586	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:205905003;1allele=T/G;version=Hapmap2;RS=rs276909072;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	212761853	212761952	.	+	.	Name=Ear_row_number;B73v2_pos=2:205920369;1allele=T/C;version=Hapmap2;RS=rs810710780;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212775467	212775566	.	+	.	Name=Malate;B73v2_pos=2:205933983;1allele=C/T;version=Hapmap2;RS=rs831870243;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212786669	212786768	.	+	.	Name=Leaf_length;B73v2_pos=2:205945185;1allele=C/T;version=Hapmap2;RS=rs131986377;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212788496	212788595	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:205947012;1allele=G/A;version=Hapmap1;RS=rs131986445;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	212789731	212789830	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:205948247;1allele=G/T;version=Hapmap1;RS=rs131986477;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	212800601	212800700	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:205959117;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212801299	212801398	.	+	.	Name=Tassel_length;B73v2_pos=2:205959815;1allele=A/T;version=Hapmap2;RS=rs809775415;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	212801309	212801408	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:205959825;1allele=C/T;version=Hapmap2;RS=rs824512139;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212873227	212873326	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:206044697;1allele=/GACGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	212874888	212874987	.	+	.	Name=Height_above_ear;B73v2_pos=2:206046358;1allele=C/T;version=Hapmap2;RS=rs131986657;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212879327	212879426	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:206050797;1allele=G/T;version=Hapmap2;RS=rs131986718;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	212882371	212882470	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:206053841;1allele=T/A;version=Hapmap2;RS=rs131986751;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	212882429	212882528	.	+	.	Name=Plant_height;B73v2_pos=2:206053899;1allele=C/G;version=Hapmap2;RS=rs131986754;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	212955618	212955717	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:206127076;1allele=C/T;version=Hapmap2;RS=rs129214087;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	212956713	212956812	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:206128171;1allele=C/A;version=Hapmap2;RS=rs129214106;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	212957376	212957475	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:206128834;1allele=G/C;version=Hapmap2;RS=rs276909660;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	213064922	213065021	.	+	.	Name=Ear_row_number;B73v2_pos=2:206221980;1allele=A/G;version=Hapmap2;RS=rs1061140477;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	213072089	213072188	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:206229147;1allele=C/T;version=Hapmap1;RS=rs726192923;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	213072969	213073068	.	+	.	Name=Stalk_strength;B73v2_pos=2:206230027;1allele=T/G;version=Hapmap1;RS=rs131987058;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	213097676	213097775	.	+	.	Name=Stalk_strength;B73v2_pos=2:206254744;1allele=T/G;version=Hapmap2;RS=rs801669390;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	213119822	213119921	.	+	.	Name=Stalk_strength;B73v2_pos=2:206276889;1allele=G/T;version=Hapmap2;RS=rs806959811;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	213183134	213183233	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:206430072;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	213264586	213264685	.	+	.	Name=Ear_row_number;B73v2_pos=2:206377630;1allele=G/A;version=Hapmap1;RS=rs131987115;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	213286043	213286142	.	+	.	Name=Ear_row_number;B73v2_pos=2:206399565;1allele=A/T;version=Hapmap2;RS=rs1061536721;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	213311968	213312067	.	+	.	Name=Stalk_strength;B73v2_pos=2:206425491;1allele=T/C;version=Hapmap2;RS=rs812731019;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	213393217	213393316	.	+	.	Name=Days_to_silk;B73v2_pos=2:206540172;1allele=C/T;version=Hapmap2;RS=rs129214680;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	213395219	213395318	.	+	.	Name=Stalk_strength;B73v2_pos=2:206542174;1allele=G/A;version=Hapmap2;RS=rs826650763;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	213432505	213432604	.	+	.	Name=Stalk_strength;B73v2_pos=2:206577795;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	213475794	213475893	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:206631890;1allele=G/T;version=Hapmap2;RS=rs276910394;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	213479796	213479895	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:206635891;1allele=A/G;version=Hapmap2;RS=rs817784883;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	213481410	213481509	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:206637506;1allele=T/A;version=Hapmap2;RS=rs813348462;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	213498354	213498453	.	+	.	Name=Tassel_length;B73v2_pos=2:206654454;1allele=G/A;version=Hapmap2;RS=rs846884884;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	213531523	213531622	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:206691189;1allele=A/C;version=Hapmap2;RS=rs827949609;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	213532081	213532180	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:206690631;1allele=G/A;version=Hapmap2;RS=rs814890595;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	213532487	213532586	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:206690225;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	213534515	213534614	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:206688196;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	213550165	213550264	.	+	.	Name=Stalk_strength;B73v2_pos=2:206704997;1allele=C/T;version=Hapmap2;RS=rs806828025;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	213603783	213603882	.	+	.	Name=Stalk_strength;B73v2_pos=2:206757999;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	213604987	213605086	.	+	.	Name=Stalk_strength;B73v2_pos=2:206759203;1allele=A/G;version=Hapmap2;RS=rs818152886;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	213664039	213664138	.	+	.	Name=Stalk_strength;B73v2_pos=2:206809982;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	213691445	213691544	.	+	.	Name=Stalk_strength;B73v2_pos=2:206841749;1allele=G/A;version=Hapmap2;RS=rs836654312;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	213750426	213750525	.	+	.	Name=Tassel_length;B73v2_pos=2:206900737;1allele=C/A;version=Hapmap2;RS=rs816467337;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	213810764	213810863	.	+	.	Name=Height_above_ear;B73v2_pos=2:206955273;1allele=T/C;version=Hapmap2;RS=rs845937764;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	213827272	213827371	.	+	.	Name=Leaf_length;B73v2_pos=2:206971781;1allele=T/G;version=Hapmap2;RS=rs276911338;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	213880602	213880701	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:207024775;1allele=C/T;version=Hapmap2;RS=rs822534319;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	213900257	213900356	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:207044430;1allele=T/C;version=Hapmap2;RS=rs131987856;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	213900413	213900512	.	+	.	Name=Days_to_silk;B73v2_pos=2:207044586;1allele=C/G;version=Hapmap2;RS=rs129215213;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	213900413	213900512	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:207044586;1allele=C/G;version=Hapmap2;RS=rs129215213;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	213940682	213940781	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:207084857;1allele=A/G;version=Hapmap2;RS=rs848547729;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	214010513	214010612	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:207150654;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	214011414	214011513	.	+	.	Name=Leaf_length;B73v2_pos=2:207151555;1allele=G/A;version=Hapmap2;RS=rs817588472;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	214019093	214019192	.	+	.	Name=Leaf_length;B73v2_pos=2:207159236;1allele=C/T;version=Hapmap2;RS=rs826994826;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	214083868	214083967	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:207224757;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	214084684	214084783	.	+	.	Name=Leaf_length;B73v2_pos=2:207225573;1allele=C/T;version=Hapmap2;RS=rs823335876;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	214090664	214090763	.	+	.	Name=Ear_row_number;B73v2_pos=2:207231554;1allele=CG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	214201963	214202062	.	+	.	Name=Tassel_length;B73v2_pos=2:207350088;1allele=C/T;version=Hapmap2;RS=rs276912114;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	214205257	214205356	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:207353382;1allele=C/G;version=Hapmap2;RS=rs725225632;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	214207352	214207451	.	+	.	Name=Leaf_length;B73v2_pos=2:207355477;1allele=C/A;version=Hapmap2;RS=rs807705335;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	214213401	214213500	.	+	.	Name=Leaf_length;B73v2_pos=2:207361526;1allele=G/T;version=Hapmap2;RS=rs804618324;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	214231603	214231702	.	+	.	Name=Days_to_silk;B73v2_pos=2:207379734;1allele=T/A;version=Hapmap2;RS=rs822721946;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	214237251	214237350	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:207385382;1allele=A/G;version=Hapmap2;RS=rs822539322;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	214267289	214267388	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:207415555;1allele=T/C;version=Hapmap1;RS=rs131988526;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	214291566	214291665	.	+	.	Name=Leaf_length;B73v2_pos=2:207439742;1allele=C/T;version=Hapmap1;RS=rs129215963;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	214453829	214453928	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:207637152;1allele=G/C;version=Hapmap2;RS=rs824542637;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	214509090	214509189	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:207692356;1allele=T/C;version=Hapmap2;RS=rs801412137;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	214510722	214510821	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:207693988;1allele=G/C;version=Hapmap2;RS=rs813705884;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	214582250	214582348	.	+	.	Name=Malate;B73v2_pos=2:207762575;1allele=T/C;version=Hapmap2;RS=rs814943129;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	214582857	214582956	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:207763184;1allele=A/G;version=Hapmap2;RS=rs276912394;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	214584300	214584399	.	+	.	Name=Leaf_length;B73v2_pos=2:207764626;1allele=C/T;version=Hapmap2;RS=rs131988687;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	214584535	214584634	.	+	.	Name=Leaf_length;B73v2_pos=2:207764861;1allele=C/T;version=Hapmap2;RS=rs803423225;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	214653341	214653440	.	+	.	Name=Ear_row_number;B73v2_pos=2:207829968;1allele=T/C;version=Hapmap2;RS=rs724671594;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	214660841	214660940	.	+	.	Name=Leaf_length;B73v2_pos=2:207837468;1allele=G/C;version=Hapmap2;RS=rs131988809;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	214670226	214670325	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:207846827;1allele=T/C;version=Hapmap2;RS=rs806806715;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	214670772	214670871	.	+	.	Name=Ear_row_number;B73v2_pos=2:207847373;1allele=A/T;version=Hapmap2;RS=rs129216216;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	214768076	214768175	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:207965173;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	214772359	214772458	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:207969456;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	214777852	214777951	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:207974957;1allele=G/C;version=Hapmap1;RS=rs131988984;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	215002408	215002507	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:208129910;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215003317	215003416	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:208129001;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215007085	215007184	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:208125233;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215011171	215011270	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:208121146;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215011291	215011390	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:208121026;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215012336	215012435	.	+	.	Name=Leaf_length;B73v2_pos=2:208119981;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215036986	215037085	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:208222971;1allele=T/C;version=Hapmap2;RS=rs131183215;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	215132241	215132340	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:208324453;1allele=T/G;version=Hapmap2;RS=rs832735538;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	215136854	215136953	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:208329070;1allele=T/C;version=Hapmap1;RS=rs131989381;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	215176652	215176751	.	+	.	Name=Days_to_silk;B73v2_pos=2:208362089;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215231751	215231850	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:208376871;1allele=T/G;version=Hapmap2;RS=rs825847074;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	215232080	215232179	.	+	.	Name=Ear_row_number;B73v2_pos=2:208377200;1allele=G/T;version=Hapmap2;RS=rs131989560;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	215261219	215261318	.	+	.	Name=Leaf_length;B73v2_pos=2:208434825;1allele=C/T;version=Hapmap2;RS=rs822730588;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	215262316	215262415	.	+	.	Name=Leaf_length;B73v2_pos=2:208435922;1allele=/CTATGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215263332	215263431	.	+	.	Name=Leaf_length;B73v2_pos=2:208436938;1allele=G/C;version=Hapmap2;RS=rs131989592;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	215263957	215264056	.	+	.	Name=Leaf_length;B73v2_pos=2:208437563;1allele=C/T;version=Hapmap2;RS=rs834605074;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	215297342	215297441	.	+	.	Name=Leaf_length;B73v2_pos=2:208483204;1allele=C/T;version=Hapmap2;RS=rs129216938;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	215343053	215343152	.	+	.	Name=Leaf_length;B73v2_pos=2:208528885;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215423156	215423255	.	+	.	Name=Tassel_length;B73v2_pos=2:208608326;1allele=G/A;version=Hapmap2;RS=rs801888982;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	215426497	215426596	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:208611667;1allele=T/C;version=Hapmap2;RS=rs806295060;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	215431257	215431356	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:208616427;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215436351	215436450	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:208621521;1allele=C/T;version=Hapmap2;RS=rs829247281;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	215440577	215440675	.	+	.	Name=Leaf_length;B73v2_pos=2:208625747;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215511352	215511451	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:208730591;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215536079	215536178	.	+	.	Name=Ear_row_number;B73v2_pos=2:208763412;1allele=A/G;version=Hapmap2;RS=rs276913803;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	215626533	215626632	.	+	.	Name=Plant_height;B73v2_pos=2:208857208;1allele=C/T;version=Hapmap2;RS=rs806806530;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	215636833	215636932	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:208867509;1allele=A/G;version=Hapmap2;RS=rs131990140;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	215640556	215640655	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:208871232;1allele=C/A;version=Hapmap2;RS=rs829648775;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	215660119	215660218	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:208823479;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215663969	215664068	.	+	.	Name=Ear_row_number;B73v2_pos=2:208819629;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215679768	215679867	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:208803833;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215754383	215754482	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:208935982;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215764765	215764864	.	+	.	Name=Ear_row_number;B73v2_pos=2:208946354;1allele=G/T;version=Hapmap1;RS=rs131990231;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	215793286	215793385	.	+	.	Name=Days_to_silk;B73v2_pos=2:208974763;1allele=C/T;version=Hapmap2;RS=rs843668144;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	215810129	215810228	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:208990824;1allele=A/T;version=Hapmap2;RS=rs816027639;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	215817699	215817798	.	+	.	Name=Days_to_silk;B73v2_pos=2:208998401;1allele=G/A;version=Hapmap2;RS=rs841446750;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	215817789	215817888	.	+	.	Name=Fumarate;B73v2_pos=2:208998491;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	215832109	215832208	.	+	.	Name=Ear_row_number;B73v2_pos=2:209011126;1allele=G/A;version=Hapmap2;RS=rs831774314;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	215832217	215832316	.	+	.	Name=Ear_row_number;B73v2_pos=2:209011234;1allele=T/G;version=Hapmap2;RS=rs276914245;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	215833690	215833789	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:209012707;1allele=T/C;version=Hapmap2;RS=rs816041081;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	215843118	215843217	.	+	.	Name=Ear_row_number;B73v2_pos=2:209019115;1allele=T/C;version=Hapmap2;RS=rs129217883;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	215897193	215897292	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:209070832;1allele=T/C;version=Hapmap2;RS=rs826359953;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	215899035	215899134	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:209072674;1allele=A/G;version=Hapmap2;RS=rs1061827934;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	215935999	215936098	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:209109682;1allele=G/T;version=Hapmap1;RS=rs131990614;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	215938992	215939091	.	+	.	Name=Days_to_silk;B73v2_pos=2:209112675;1allele=A/C;version=Hapmap1;RS=rs131990681;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	215959280	215959379	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:209132958;1allele=A/C;version=Hapmap2;RS=rs813112517;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	215960162	215960261	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:209133840;1allele=A/G;version=Hapmap2;RS=rs129218164;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	216057588	216057687	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:209240357;1allele=G/A;version=Hapmap2;RS=rs845823111;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	216066094	216066193	.	+	.	Name=Leaf_length;B73v2_pos=2:209248863;1allele=G/A;version=Hapmap2;RS=rs129218330;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	216081210	216081309	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:209263979;1allele=C/T;version=Hapmap2;RS=rs131991028;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	216083113	216083212	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:209265882;1allele=C/T;version=Hapmap2;RS=rs129218380;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	216094903	216095002	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:209277672;1allele=C/G;version=Hapmap2;RS=rs833105477;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	216105138	216105237	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:209287899;1allele=T/C;version=Hapmap2;RS=rs129218450;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	216109365	216109464	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:209292125;1allele=G/C;version=Hapmap2;RS=rs129218479;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	216116173	216116272	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:209298933;1allele=A/G;version=Hapmap2;RS=rs822731211;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	216181879	216181978	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:209356497;1allele=G/A;version=Hapmap2;RS=rs845461673;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	216315800	216315899	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:209478334;1allele=T/C;version=Hapmap2;RS=rs276914641;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	216343014	216343113	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:209505549;1allele=C/T;version=Hapmap2;RS=rs815881080;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	216346588	216346687	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:209509123;1allele=A/T;version=Hapmap2;RS=rs830691208;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	216407842	216407941	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:209571023;1allele=A/G;version=Hapmap2;RS=rs827108319;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	216419338	216419437	.	+	.	Name=Height_above_ear;B73v2_pos=2:209582521;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	216420089	216420188	.	+	.	Name=Height_above_ear;B73v2_pos=2:209583272;1allele=CCT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	216420609	216420708	.	+	.	Name=Height_above_ear;B73v2_pos=2:209583792;1allele=C/G;version=Hapmap1;RS=rs131991415;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	216583917	216584016	.	+	.	Name=Fumarate;B73v2_pos=2:209759222;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	216583917	216584016	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:209759222;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	216585988	216586087	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:209757159;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	216870206	216870305	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:210034468;1allele=A/C;version=Hapmap2;RS=rs131991823;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	216872501	216872600	.	+	.	Name=Leaf_width;B73v2_pos=2:210036763;1allele=A/G;version=Hapmap2;RS=rs131991876;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	216872609	216872708	.	+	.	Name=Leaf_width;B73v2_pos=2:210036871;1allele=G/C;version=Hapmap2;RS=rs843895651;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	216888700	216888799	.	+	.	Name=Leaf_width;B73v2_pos=2:210052881;1allele=A/G;version=Hapmap2;RS=rs835020375;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	216891718	216891817	.	+	.	Name=Leaf_width;B73v2_pos=2:210055900;1allele=G/A;version=Hapmap2;RS=rs804726564;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	217077058	217077157	.	+	.	Name=Starch;B73v2_pos=2:210252873;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	217189817	217189916	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:210397443;1allele=G/A;version=Hapmap2;RS=rs818940780;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	217191477	217191576	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:210399103;1allele=T/A;version=Hapmap2;RS=rs276916153;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	217241094	217241193	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:210449322;1allele=C/G;version=Hapmap2;RS=rs802389085;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	217241094	217241193	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:210449322;1allele=C/G;version=Hapmap2;RS=rs802389085;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	217419518	217419617	.	+	.	Name=Ear_row_number;B73v2_pos=2:210625331;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	217458240	217458339	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:210664928;1allele=/AGCTA;version=Hapmap1;RS=rs131992606;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	217458656	217458755	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:210665344;1allele=/GT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	217585098	217585197	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:210798263;1allele=G/T;version=Hapmap2;RS=rs835051501;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	217625348	217625447	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:210838520;1allele=C/T;version=Hapmap2;RS=rs129221338;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	217643115	217643214	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:210856287;1allele=C/T;version=Hapmap1;RS=rs727403521;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	217909416	217909515	.	+	.	Name=Starch;B73v2_pos=2:211120902;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	217940550	217940649	.	+	.	Name=Leaf_length;B73v2_pos=2:211152010;1allele=C/T;version=Hapmap2;RS=rs849891960;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	217975556	217975655	.	+	.	Name=Tassel_length;B73v2_pos=2:211187632;1allele=C/G;version=Hapmap2;RS=rs276917318;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	217976683	217976782	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:211188759;1allele=T/C;version=Hapmap2;RS=rs818215293;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	217978369	217978468	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:211190445;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	218069241	218069340	.	+	.	Name=Tassel_length;B73v2_pos=2:211282093;1allele=T/C;version=Hapmap2;RS=rs129221948;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	218070786	218070885	.	+	.	Name=Height_above_ear;B73v2_pos=2:211283638;1allele=T/C;version=Hapmap2;RS=rs129221954;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	218269977	218270076	.	+	.	Name=Tassel_length;B73v2_pos=2:211477763;1allele=C/T;version=Hapmap2;RS=rs129222310;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	218383598	218383697	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:211591576;1allele=G/A;version=Hapmap2;RS=rs806094980;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	218508783	218508882	.	+	.	Name=Ear_row_number;B73v2_pos=2:211724338;1allele=G/C;version=Hapmap2;RS=rs276917977;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	218528599	218528698	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:211744154;1allele=G/A;version=Hapmap2;RS=rs824495099;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	218583428	218583527	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:211798387;1allele=T/C;version=Hapmap2;RS=rs802060456;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	218587254	218587353	.	+	.	Name=Height_above_ear;B73v2_pos=2:211802213;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	218620811	218620910	.	+	.	Name=Fumarate;B73v2_pos=2:211835776;1allele=T/A;version=Hapmap2;RS=rs1061966303;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	218634572	218634671	.	+	.	Name=Glutamate;B73v2_pos=2:211849638;1allele=T/C;version=Hapmap1;RS=rs724579374;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	218694205	218694304	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:211905137;1allele=C/T;version=Hapmap2;RS=rs836889338;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	218743049	218743148	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:211952448;1allele=A/G;version=Hapmap2;RS=rs848519849;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	218891781	218891880	.	+	.	Name=Ear_row_number;B73v2_pos=2:212105041;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	219033260	219033359	.	+	.	Name=Stalk_strength;B73v2_pos=2:212233733;1allele=C/A;version=Hapmap2;RS=rs826874603;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	219108394	219108493	.	+	.	Name=Glutamate;B73v2_pos=2:212292708;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	219147353	219147452	.	+	.	Name=Glutamate;B73v2_pos=2:212349136;1allele=T/C;version=Hapmap2;RS=rs131994190;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	219187147	219187246	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:212387350;1allele=C/A;version=Hapmap2;RS=rs840046591;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	219197640	219197739	.	+	.	Name=Fumarate;B73v2_pos=2:212399141;1allele=A/G;version=Hapmap2;RS=rs805984772;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	219219823	219219922	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:212421381;1allele=A/G;version=Hapmap2;RS=rs809571179;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	219330328	219330427	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:212538292;1allele=G/A;version=Hapmap2;RS=rs846745311;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	219435220	219435319	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:212644187;1allele=A/G;version=Hapmap1;RS=rs131994824;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	219435220	219435319	.	+	.	Name=Plant_height;B73v2_pos=2:212644187;1allele=A/G;version=Hapmap1;RS=rs131994824;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	219435262	219435361	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:212644229;1allele=C/A;version=Hapmap1;RS=rs131994825;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	219435262	219435361	.	+	.	Name=Plant_height;B73v2_pos=2:212644229;1allele=C/A;version=Hapmap1;RS=rs131994825;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	219493294	219493393	.	+	.	Name=Plant_height;B73v2_pos=2:212716715;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	219579490	219579589	.	+	.	Name=Ear_height;B73v2_pos=2:212802451;1allele=T/C;version=Hapmap2;RS=rs805506588;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	219580703	219580802	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:212803664;1allele=T/C;version=Hapmap2;RS=rs276919406;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	219614343	219614442	.	+	.	Name=Total_amino_acids;B73v2_pos=2:212835348;1allele=C/T;version=Hapmap2;RS=rs845735719;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	219672349	219672448	.	+	.	Name=Stalk_strength;B73v2_pos=2:212893925;1allele=T/C;version=Hapmap1;RS=rs129224349;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	219863696	219863795	.	+	.	Name=Stalk_strength;B73v2_pos=2:213088506;1allele=T/C;version=Hapmap2;RS=rs726845381;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	219869513	219869612	.	+	.	Name=Stalk_strength;B73v2_pos=2:213094323;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	219954600	219954699	.	+	.	Name=Fumarate;B73v2_pos=2:213174214;1allele=T/C;version=Hapmap2;RS=rs276920026;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	219955925	219956024	.	+	.	Name=Days_to_silk;B73v2_pos=2:213175540;1allele=G/A;version=Hapmap2;RS=rs131995460;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	219956363	219956462	.	+	.	Name=Days_to_silk;B73v2_pos=2:213175978;1allele=G/A;version=Hapmap2;RS=rs837207615;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	219984227	219984326	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:213203844;1allele=C/T;version=Hapmap2;RS=rs833931496;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	220101224	220101323	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:213418300;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	220121210	220121309	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:213398316;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	220126848	220126947	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:213392679;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	220168055	220168154	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:213325193;1allele=C/T;version=Hapmap2;RS=rs837914246;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	220186931	220187030	.	+	.	Name=Ear_height;B73v2_pos=2:213306311;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	220248111	220248210	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=2:213537985;1allele=T/A;version=Hapmap2;RS=rs806261543;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	220286574	220286673	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:213500288;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	220371211	220371310	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:213593097;1allele=T/C;version=Hapmap2;RS=rs129225281;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	220581932	220582031	.	+	.	Name=Tassel_length;B73v2_pos=2:213801250;1allele=T/C;version=Hapmap2;RS=rs129225621;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	220592628	220592727	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:213811946;1allele=C/T;version=Hapmap1;RS=rs131996185;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	220592646	220592745	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:213811964;1allele=G/A;version=Hapmap1;RS=rs131996187;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	220597120	220597219	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:213816438;1allele=A/G;version=Hapmap2;RS=rs843754801;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	220599572	220599671	.	+	.	Name=Stalk_strength;B73v2_pos=2:213818890;1allele=T/C;version=Hapmap2;RS=rs835371431;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	220601915	220602014	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:213821233;1allele=C/A;version=Hapmap2;RS=rs814191216;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	220627292	220627391	.	+	.	Name=Days_to_silk;B73v2_pos=2:213848803;1allele=A/G;version=Hapmap2;RS=rs845947329;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	220627772	220627871	.	+	.	Name=Days_to_silk;B73v2_pos=2:213849283;1allele=G/A;version=Hapmap2;RS=rs276920974;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	220706703	220706802	.	+	.	Name=Stalk_strength;B73v2_pos=2:213938914;1allele=A/G;version=Hapmap2;RS=rs832444269;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	220777381	220777480	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:213993196;1allele=G/C;version=Hapmap2;RS=rs820596952;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	220816113	220816212	.	+	.	Name=Days_to_silk;B73v2_pos=2:214031482;1allele=T/A;version=Hapmap2;RS=rs806422199;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	220841061	220841160	.	+	.	Name=Days_to_silk;B73v2_pos=2:214056434;1allele=T/C;version=Hapmap2;RS=rs844358933;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	220879172	220879271	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:214094547;1allele=A/G;version=Hapmap2;RS=rs809819036;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	220961565	220961664	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:214209889;1allele=C/A;version=Hapmap2;RS=rs847611624;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	221159728	221159827	.	+	.	Name=Tassel_length;B73v2_pos=2:214386319;1allele=G/T;version=Hapmap2;RS=rs1062589141;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	221237926	221238025	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:214472697;1allele=A/G;version=Hapmap2;RS=rs849817932;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	221286911	221287010	.	+	.	Name=Tassel_length;B73v2_pos=2:214522432;1allele=A/C;version=Hapmap2;RS=rs276921444;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	221325609	221325708	.	+	.	Name=Stalk_strength;B73v2_pos=2:214561133;1allele=G/A;version=Hapmap2;RS=rs826584435;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	221343806	221343905	.	+	.	Name=Stalk_strength;B73v2_pos=2:214579418;1allele=A/G;version=Hapmap2;RS=rs835346911;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	221426324	221426423	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:214658496;1allele=G/A;version=Hapmap2;RS=rs825416815;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	221426585	221426684	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:214658757;1allele=T/A;version=Hapmap2;RS=rs817147720;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	221426595	221426694	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:214658767;1allele=G/A;version=Hapmap2;RS=rs276921525;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	221433557	221433656	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:214668527;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	221488326	221488425	.	+	.	Name=Southern_leaf_blight;B73v2_pos=2:214687803;1allele=C/T;version=Hapmap2;RS=rs847062146;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	221659808	221659907	.	+	.	Name=Leaf_length;B73v2_pos=2:214853950;1allele=A/G;version=Hapmap2;RS=rs816893325;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	221690286	221690385	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:214884250;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	221737501	221737600	.	+	.	Name=Leaf_length;B73v2_pos=2:214932588;1allele=C/T;version=Hapmap2;RS=rs831871484;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	221764016	221764115	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:214959183;1allele=G/C;version=Hapmap2;RS=rs806442555;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	221764016	221764115	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:214959183;1allele=G/C;version=Hapmap2;RS=rs806442555;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	221765146	221765245	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:214960313;1allele=G/A;version=Hapmap2;RS=rs811596338;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	221835539	221835638	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:215024712;1allele=T/C;version=Hapmap2;RS=rs814386729;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	221888294	221888393	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:215087647;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	221901035	221901134	.	+	.	Name=Tassel_length;B73v2_pos=1:52794325;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	221946072	221946171	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:215142867;1allele=T/C;version=Hapmap2;RS=rs805519089;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	222149547	222149646	.	+	.	Name=Fumarate;B73v2_pos=2:215347843;1allele=C/T;version=Hapmap2;RS=rs276922683;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	222190646	222190745	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:215389200;1allele=C/T;version=Hapmap2;RS=rs807491771;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	222206792	222206891	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:215403468;1allele=T/C;version=Hapmap2;RS=rs726691266;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	222206792	222206891	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:215403468;1allele=T/C;version=Hapmap2;RS=rs726691266;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	222210882	222210981	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:215407558;1allele=T/C;version=Hapmap2;RS=rs836349117;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	222356996	222357095	.	+	.	Name=Leaf_width;B73v2_pos=2:215556536;1allele=T/A;version=Hapmap2;RS=rs276923357;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	222396129	222396228	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:215600961;1allele=T/C;version=Hapmap2;RS=rs803772018;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	222439649	222439748	.	+	.	Name=Leaf_width;B73v2_pos=2:215644483;1allele=A/G;version=Hapmap1;RS=rs131998062;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	222681419	222681518	.	+	.	Name=Leaf_width;B73v2_pos=2:215944622;1allele=G/A;version=Hapmap2;RS=rs129228468;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	222683068	222683167	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:215946271;1allele=C/T;version=Hapmap2;RS=rs129228461;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	222683100	222683199	.	+	.	Name=Leaf_width;B73v2_pos=2:215946303;1allele=A/G;version=Hapmap2;RS=rs821667820;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	222741078	222741177	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:216005468;1allele=A/T;version=Hapmap2;RS=rs803591039;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	222741078	222741177	.	+	.	Name=Plant_height;B73v2_pos=2:216005468;1allele=A/T;version=Hapmap2;RS=rs803591039;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	222741112	222741211	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:216005502;1allele=T/C;version=Hapmap2;RS=rs131998291;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	222741112	222741211	.	+	.	Name=Plant_height;B73v2_pos=2:216005502;1allele=T/C;version=Hapmap2;RS=rs131998291;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	222839665	222839764	.	+	.	Name=Tassel_length;B73v2_pos=2:216113699;1allele=T/A;version=Hapmap2;RS=rs1061241726;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	222859003	222859102	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:216131809;1allele=A/C;version=Hapmap2;RS=rs823120316;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	222926197	222926296	.	+	.	Name=Nitrate;B73v2_pos=2:216189041;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	223019047	223019146	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216255049;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	223019361	223019460	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216254735;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	223031291	223031390	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216288114;1allele=G/A;version=Hapmap2;RS=rs129228821;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223055641	223055740	.	+	.	Name=Nitrate;B73v2_pos=2:216311728;1allele=G/A;version=Hapmap1;RS=rs131998510;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223282239	223282338	.	+	.	Name=Nitrate;B73v2_pos=2:216551834;1allele=G/A;version=Hapmap2;RS=rs825310703;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223282411	223282510	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216552006;1allele=A/G;version=Hapmap1;RS=rs835423238;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223323339	223323438	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216592932;1allele=G/A;version=Hapmap2;RS=rs802945251;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223331123	223331222	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:216600716;1allele=T/C;version=Hapmap2;RS=rs817752998;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	223338232	223338331	.	+	.	Name=Tassel_length;B73v2_pos=2:216607825;1allele=C/G;version=Hapmap1;RS=rs131998809;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223338271	223338370	.	+	.	Name=Tassel_length;B73v2_pos=2:216607864;1allele=/GAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	223340847	223340946	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:216610441;1allele=C/T;version=Hapmap2;RS=rs849702870;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223340983	223341082	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216610577;1allele=T/A;version=Hapmap2;RS=rs847531257;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	223341323	223341422	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216610917;1allele=C/A;version=Hapmap2;RS=rs129229264;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	223344189	223344288	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216613783;1allele=C/G;version=Hapmap2;RS=rs724318907;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	223344893	223344992	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216614487;1allele=C/T;version=Hapmap2;RS=rs129229294;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223345010	223345109	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216614604;1allele=C/T;version=Hapmap2;RS=rs129229295;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223409940	223410039	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:216669571;1allele=A/G;version=Hapmap2;RS=rs813035918;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223410148	223410247	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:216669779;1allele=A/T;version=Hapmap2;RS=rs809001198;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	223420888	223420987	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:216680519;1allele=G/A;version=Hapmap2;RS=rs824769210;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	223426306	223426405	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:216685937;1allele=C/G;version=Hapmap2;RS=rs829709208;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	223487217	223487316	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:216747183;1allele=A/G;version=Hapmap2;RS=rs842566755;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223601525	223601624	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:216844739;1allele=G/T;version=Hapmap2;RS=rs817478884;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	223689453	223689552	.	+	.	Name=Tassel_length;B73v2_pos=2:216928320;1allele=T/C;version=Hapmap2;RS=rs129229717;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	223690543	223690642	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:216929410;1allele=+/-;version=Hapmap2;RS=rs830286553;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223690706	223690805	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:216929573;1allele=C/T;version=Hapmap2;RS=rs129229728;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223690813	223690912	.	+	.	Name=Ear_height;B73v2_pos=2:216929680;1allele=C/T;version=Hapmap2;RS=rs129229730;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223690851	223690950	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:216929718;1allele=G/C;version=Hapmap2;RS=rs276924766;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	223691204	223691303	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:216930071;1allele=T/C;version=Hapmap2;RS=rs129229734;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	223691811	223691910	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:216930678;1allele=C/T;version=Hapmap2;RS=rs131999343;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223692415	223692514	.	+	.	Name=Days_to_silk;B73v2_pos=2:216931282;1allele=C/T;version=Hapmap2;RS=rs129229742;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	223692415	223692514	.	+	.	Name=Ear_height;B73v2_pos=2:216931282;1allele=T/C;version=Hapmap1;RS=rs129229742;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	223692415	223692514	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:216931282;1allele=C/T;version=Hapmap2;RS=rs129229742;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	223692504	223692603	.	+	.	Name=Ear_height;B73v2_pos=2:216931371;1allele=A/G;version=Hapmap2;RS=rs129229745;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223692504	223692603	.	+	.	Name=Plant_height;B73v2_pos=2:216931371;1allele=A/G;version=Hapmap2;RS=rs129229745;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223692621	223692720	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:216931488;1allele=G/A;version=Hapmap2;RS=rs129229746;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223778932	223779031	.	+	.	Name=Plant_height;B73v2_pos=2:216986680;1allele=C/G;version=Hapmap2;RS=rs129229879;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	223780745	223780844	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:216988493;1allele=A/G;version=Hapmap2;RS=rs820086673;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223781654	223781753	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:216989402;1allele=T/G;version=Hapmap2;RS=rs276924805;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	223781654	223781753	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:216989402;1allele=T/G;version=Hapmap2;RS=rs276924805;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	223796938	223797037	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:217004687;1allele=G/A;version=Hapmap2;RS=rs129229831;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223796938	223797037	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:217004687;1allele=G/A;version=Hapmap2;RS=rs129229831;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	223797016	223797115	.	+	.	Name=Ear_height;B73v2_pos=2:217004765;1allele=T/C;version=Hapmap2;RS=rs131999500;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	223803989	223804088	.	+	.	Name=Tassel_length;B73v2_pos=2:217011743;1allele=C/G;version=Hapmap1;RS=rs131999447;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	223852810	223852909	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:217092571;1allele=T/C;version=Hapmap2;RS=rs276924855;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	223852985	223853084	.	+	.	Name=Plant_height;B73v2_pos=2:217092746;1allele=G/C;version=Hapmap2;RS=rs131999601;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	223853149	223853248	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:217092910;1allele=T/C;version=Hapmap2;RS=rs131999610;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	223853234	223853333	.	+	.	Name=Plant_height;B73v2_pos=2:217092995;1allele=G/T;version=Hapmap2;RS=rs816860452;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	223853976	223854075	.	+	.	Name=Ear_height;B73v2_pos=2:217093737;1allele=T/A;version=Hapmap2;RS=rs815560979;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	223854014	223854113	.	+	.	Name=Stalk_strength;B73v2_pos=2:217093775;1allele=A/G;version=Hapmap2;RS=rs276924874;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223854766	223854865	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:217094527;1allele=T/G;version=Hapmap2;RS=rs830603296;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	223857083	223857182	.	+	.	Name=Ear_height;B73v2_pos=2:217096844;1allele=A/C;version=Hapmap2;RS=rs131999653;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223857823	223857922	.	+	.	Name=Plant_height;B73v2_pos=2:217097584;1allele=A/T;version=Hapmap1;RS=rs131999676;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	223857832	223857931	.	+	.	Name=Plant_height;B73v2_pos=2:217097593;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	223905799	223905898	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:217126652;1allele=T/C;version=Hapmap2;RS=rs839562733;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	223987101	223987200	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:217228949;1allele=A/C;version=Hapmap2;RS=rs820698458;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	224034033	224034132	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:217275889;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	224086154	224086253	.	+	.	Name=Stalk_strength;B73v2_pos=2:217334703;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	224103994	224104093	.	+	.	Name=Stalk_strength;B73v2_pos=2:217352539;1allele=C/T;version=Hapmap2;RS=rs820895782;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	224109382	224109481	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:217357925;1allele=T/C;version=Hapmap1;RS=rs132000136;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	224228546	224228645	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:217465176;1allele=T/C;version=Hapmap2;RS=rs845712952;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	224274385	224274484	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:217508617;1allele=A/G;version=Hapmap2;RS=rs276925569;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	224314342	224314441	.	+	.	Name=Days_to_silk;B73v2_pos=2:217547987;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	224396668	224396767	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:217630211;1allele=C/T;version=Hapmap2;RS=rs129230205;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	224397651	224397750	.	+	.	Name=Starch;B73v2_pos=2:217631194;1allele=G/A;version=Hapmap2;RS=rs834483784;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	224399241	224399340	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:217632784;1allele=T/G;version=Hapmap1;RS=rs132000296;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	224455897	224455996	.	+	.	Name=Days_to_silk;B73v2_pos=2:217685068;1allele=G/C;version=Hapmap1;RS=rs843252178;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	224456242	224456341	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:217685413;1allele=G/C;version=Hapmap2;RS=rs132000444;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	224463854	224463953	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:217693025;1allele=A/T;version=Hapmap2;RS=rs129230415;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	224497461	224497560	.	+	.	Name=Days_to_silk;B73v2_pos=2:217724245;1allele=T/A;version=Hapmap2;RS=rs276925992;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	224597626	224597725	.	+	.	Name=Ear_height;B73v2_pos=2:217829720;1allele=T/C;version=Hapmap2;RS=rs805889316;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	224609868	224609967	.	+	.	Name=Plant_height;B73v2_pos=2:217847407;1allele=T/C;version=Hapmap2;RS=rs820705934;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	224609868	224609967	.	+	.	Name=Ear_height;B73v2_pos=2:217847407;1allele=T/C;version=Hapmap2;RS=rs820705934;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	224625239	224625338	.	+	.	Name=Ear_height;B73v2_pos=2:217862909;1allele=A/G;version=Hapmap2;RS=rs132000646;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	224699290	224699389	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:217941721;1allele=C/T;version=Hapmap2;RS=rs801891702;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	224798425	224798524	.	+	.	Name=Ear_height;B73v2_pos=2:218041699;1allele=A/G;version=Hapmap2;RS=rs828890709;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225211923	225212022	.	+	.	Name=Plant_height;B73v2_pos=2:218490958;1allele=T/C;version=Hapmap2;RS=rs814694975;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225231774	225231873	.	+	.	Name=Starch;B73v2_pos=2:218510807;1allele=C/T;version=Hapmap2;RS=rs815487059;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225262216	225262315	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218540515;1allele=T/G;version=Hapmap2;RS=rs1062449784;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	225304565	225304664	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:218583496;1allele=C/G;version=Hapmap2;RS=rs724851833;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	225318523	225318622	.	+	.	Name=Plant_height;B73v2_pos=2:218597098;1allele=A/G;version=Hapmap2;RS=rs816068605;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225332527	225332626	.	+	.	Name=Days_to_silk;B73v2_pos=2:218611104;1allele=G/A;version=Hapmap2;RS=rs838285863;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	225358552	225358651	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:218636992;1allele=C/A;version=Hapmap1;RS=rs129230847;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	225390973	225391072	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:218665430;1allele=C/T;version=Hapmap2;RS=rs846830942;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225417196	225417295	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218691654;1allele=C/A;version=Hapmap2;RS=rs276927137;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	225427423	225427522	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:218701881;1allele=G/A;version=Hapmap1;RS=rs132000970;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	225427423	225427522	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218701881;1allele=G/A;version=Hapmap1;RS=rs132000970;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	225428712	225428811	.	+	.	Name=Days_to_silk;B73v2_pos=2:218703170;1allele=G/A;version=Hapmap2;RS=rs276927201;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225428712	225428811	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218703170;1allele=G/A;version=Hapmap2;RS=rs276927201;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225428712	225428811	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:218703170;1allele=G/A;version=Hapmap2;RS=rs276927201;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225428712	225428811	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218703170;1allele=G/A;version=Hapmap2;RS=rs276927201;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225436184	225436283	.	+	.	Name=Days_to_silk;B73v2_pos=2:218710640;1allele=C/T;version=Hapmap2;RS=rs276927235;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225443440	225443539	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218717896;1allele=G/T;version=Hapmap2;RS=rs276927264;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	225444408	225444507	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218718533;1allele=C/T;version=Hapmap1;RS=rs129231019;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225449739	225449838	.	+	.	Name=Days_to_silk;B73v2_pos=2:218723864;1allele=C/T;version=Hapmap2;RS=rs1064367036;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225491889	225491988	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218766013;1allele=A/C;version=Hapmap2;RS=rs847096559;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	225491889	225491988	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218766013;1allele=A/C;version=Hapmap2;RS=rs847096559;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	225543156	225543255	.	+	.	Name=Nitrate;B73v2_pos=2:218817717;1allele=G/A;version=Hapmap2;RS=rs818666574;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	225613372	225613471	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218887662;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	225616844	225616943	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:218891134;1allele=G/A;version=Hapmap2;RS=rs820257750;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	225630814	225630913	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:218906253;1allele=C/T;version=Hapmap2;RS=rs843159324;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225630814	225630913	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:218906253;1allele=C/T;version=Hapmap2;RS=rs843159324;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225631397	225631496	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218906835;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	225644872	225644971	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218920305;1allele=A/G;version=Hapmap2;RS=rs834991345;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225661665	225661764	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218937499;1allele=T/C;version=Hapmap1;RS=rs132001168;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225673290	225673389	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218949125;1allele=C/A;version=Hapmap2;RS=rs276928066;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	225673290	225673389	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:218949125;1allele=C/A;version=Hapmap2;RS=rs276928066;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	225676612	225676711	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:218952447;1allele=G/A;version=Hapmap2;RS=rs1063977050;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	225677054	225677153	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218952889;1allele=C/T;version=Hapmap2;RS=rs276928153;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225682114	225682213	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:218957862;1allele=C/A;version=Hapmap2;RS=rs837350895;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	225692252	225692351	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:218968000;1allele=G/A;version=Hapmap2;RS=rs276928304;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	225748230	225748329	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:219021702;1allele=G/A;version=Hapmap1;RS=rs132001329;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	225757830	225757929	.	+	.	Name=Ear_height;B73v2_pos=2:219031302;1allele=T/C;version=Hapmap1;RS=rs132001368;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	225780806	225780905	.	+	.	Name=Tassel_length;B73v2_pos=2:219054355;1allele=T/C;version=Hapmap1;RS=rs129231768;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225812714	225812813	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:219086209;1allele=C/T;version=Hapmap2;RS=rs808144637;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225851856	225851955	.	+	.	Name=Ear_height;B73v2_pos=2:219125179;1allele=C/T;version=Hapmap2;RS=rs805928765;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225861868	225861967	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:219135191;1allele=C/T;version=Hapmap2;RS=rs1060842281;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225919018	225919117	.	+	.	Name=Ear_height;B73v2_pos=2:219191405;1allele=C/A;version=Hapmap2;RS=rs834130796;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	225920109	225920208	.	+	.	Name=Ear_height;B73v2_pos=2:219192496;1allele=A/G;version=Hapmap2;RS=rs841706498;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	225930442	225930541	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219202828;1allele=G/T;version=Hapmap2;RS=rs838411757;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	225950740	225950839	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:219223127;1allele=C/T;version=Hapmap2;RS=rs1063327237;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	225950870	225950969	.	+	.	Name=Ear_height;B73v2_pos=2:219223257;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	225950899	225950998	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:219223286;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	225952275	225952374	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:219224662;1allele=G/A;version=Hapmap2;RS=rs808709708;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	225953138	225953237	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:219225525;1allele=T/C;version=Hapmap2;RS=rs129232141;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225953138	225953237	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219225525;1allele=T/C;version=Hapmap2;RS=rs129232141;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225953138	225953237	.	+	.	Name=Ear_height;B73v2_pos=2:219225525;1allele=T/C;version=Hapmap2;RS=rs129232141;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	225968237	225968336	.	+	.	Name=Stalk_strength;B73v2_pos=2:219240624;1allele=G/T;version=Hapmap2;RS=rs838450087;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	225990162	225990261	.	+	.	Name=Tassel_length;B73v2_pos=2:219262546;1allele=G/T;version=Hapmap2;RS=rs845547775;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	226007228	226007327	.	+	.	Name=Tassel_length;B73v2_pos=2:219281076;1allele=G/A;version=Hapmap2;RS=rs843519024;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226011414	226011513	.	+	.	Name=Tassel_length;B73v2_pos=2:219285262;1allele=G/A;version=Hapmap2;RS=rs726564161;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226014172	226014271	.	+	.	Name=Leaf_width;B73v2_pos=2:219288020;1allele=A/C;version=Hapmap2;RS=rs129232550;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	226017908	226018007	.	+	.	Name=Plant_height;B73v2_pos=2:219291756;1allele=G/A;version=Hapmap2;RS=rs825065848;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226019419	226019518	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219293267;1allele=C/T;version=Hapmap2;RS=rs132001606;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226019419	226019518	.	+	.	Name=Ear_height;B73v2_pos=2:219293267;1allele=C/T;version=Hapmap2;RS=rs132001606;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226019499	226019598	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:219293347;1allele=G/A;version=Hapmap2;RS=rs276929420;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	226024691	226024790	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:219298539;1allele=C/T;version=Hapmap2;RS=rs276929442;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226049465	226049564	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:219323412;1allele=A/G;version=Hapmap2;RS=rs276929467;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226051993	226052092	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:219325940;1allele=A/G;version=Hapmap2;RS=rs276929482;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226054088	226054187	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:219328035;1allele=A/T;version=Hapmap2;RS=rs833358494;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	226056316	226056415	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:219330263;1allele=T/C;version=Hapmap1;RS=rs724595135;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226114371	226114470	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:219388766;1allele=C/T;version=Hapmap2;RS=rs276929626;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226120569	226120668	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:219394964;1allele=T/C;version=Hapmap1;RS=rs276929677;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226121368	226121467	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:219395763;1allele=G/T;version=Hapmap1;RS=rs129232728;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	226121609	226121708	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:219396004;1allele=T/C;version=Hapmap1;RS=rs132001758;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226121610	226121709	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219396005;1allele=/CA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	226121621	226121720	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219396016;1allele=T/C;version=Hapmap1;RS=rs132001762;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226121621	226121720	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:219396016;1allele=T/C;version=Hapmap1;RS=rs132001762;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226129567	226129666	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219403964;1allele=G/A;version=Hapmap2;RS=rs809948106;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226132482	226132581	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219406879;1allele=C/T;version=Hapmap2;RS=rs841171051;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226180841	226180940	.	+	.	Name=Tassel_length;B73v2_pos=2:219458087;1allele=G/T;version=Hapmap2;RS=rs806269359;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	226184369	226184468	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:219461615;1allele=A/G;version=Hapmap2;RS=rs276929934;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226204615	226204714	.	+	.	Name=Plant_height;B73v2_pos=2:219481863;1allele=T/C;version=Hapmap2;RS=rs828246185;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226204615	226204714	.	+	.	Name=Ear_height;B73v2_pos=2:219481863;1allele=T/C;version=Hapmap2;RS=rs828246185;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226204769	226204868	.	+	.	Name=Stalk_strength;B73v2_pos=2:219482017;1allele=T/A;version=Hapmap2;RS=rs832597961;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	226257316	226257415	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:219535540;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	226271967	226272066	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:219550192;1allele=G/C;version=Hapmap2;RS=rs819807237;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	226275748	226275847	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:219553973;1allele=G/A;version=Hapmap2;RS=rs805727824;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226281590	226281689	.	+	.	Name=Ear_height;B73v2_pos=2:219559815;1allele=C/T;version=Hapmap2;RS=rs823859205;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226319979	226320078	.	+	.	Name=Tassel_length;B73v2_pos=2:219599972;1allele=G/A;version=Hapmap2;RS=rs845354575;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226368371	226368470	.	+	.	Name=Tassel_length;B73v2_pos=2:219658292;1allele=G/A;version=Hapmap2;RS=rs830216836;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	226370150	226370249	.	+	.	Name=Plant_height;B73v2_pos=2:219660071;1allele=G/A;version=Hapmap2;RS=rs826264153;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226376729	226376828	.	+	.	Name=Plant_height;B73v2_pos=2:219666646;1allele=G/A;version=Hapmap2;RS=rs805008788;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226381698	226381797	.	+	.	Name=Tassel_length;B73v2_pos=2:219671615;1allele=G/C;version=Hapmap2;RS=rs817756879;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	226437294	226437393	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:219727214;1allele=C/T;version=Hapmap2;RS=rs822800001;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226441254	226441353	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:219731174;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	226540916	226541015	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:219800126;1allele=A/G;version=Hapmap2;RS=rs826639265;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	226553527	226553626	.	+	.	Name=Tassel_length;B73v2_pos=2:219812737;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	226561853	226561952	.	+	.	Name=Tassel_length;B73v2_pos=2:219821064;1allele=C/A;version=Hapmap2;RS=rs827857313;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	226670208	226670307	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:219910076;1allele=T/C;version=Hapmap2;RS=rs826948139;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226673523	226673622	.	+	.	Name=Tassel_length;B73v2_pos=2:219913391;1allele=C/T;version=Hapmap2;RS=rs129233520;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226705694	226705793	.	+	.	Name=Ear_height;B73v2_pos=2:219945567;1allele=G/A;version=Hapmap2;RS=rs1064235994;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226726928	226727027	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:219974360;1allele=C/T;version=Hapmap2;RS=rs847178190;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	226815351	226815450	.	+	.	Name=Stalk_strength;B73v2_pos=2:220063605;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	226833052	226833151	.	+	.	Name=Plant_height;B73v2_pos=2:220081304;1allele=T/A;version=Hapmap2;RS=rs815548071;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	226833437	226833536	.	+	.	Name=Ear_height;B73v2_pos=2:220081689;1allele=A/C;version=Hapmap2;RS=rs804953215;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	226833447	226833546	.	+	.	Name=Ear_height;B73v2_pos=2:220081699;1allele=G/A;version=Hapmap2;RS=rs846289157;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226833447	226833546	.	+	.	Name=Plant_height;B73v2_pos=2:220081699;1allele=G/A;version=Hapmap2;RS=rs846289157;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226856062	226856161	.	+	.	Name=Ear_height;B73v2_pos=2:220104317;1allele=A/G;version=Hapmap2;RS=rs129233924;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	226856062	226856161	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:220104317;1allele=A/G;version=Hapmap2;RS=rs129233924;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	226861404	226861503	.	+	.	Name=Ear_height;B73v2_pos=2:220109659;1allele=T/C;version=Hapmap2;RS=rs848864864;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226861404	226861503	.	+	.	Name=Plant_height;B73v2_pos=2:220109659;1allele=T/C;version=Hapmap2;RS=rs848864864;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226885463	226885562	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:220133430;1allele=T/C;version=Hapmap2;RS=rs849307941;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	226893997	226894096	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:220142279;1allele=C/G;version=Hapmap2;RS=rs725719115;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	226898077	226898176	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:220146359;1allele=G/A;version=Hapmap2;RS=rs804985303;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	226901172	226901271	.	+	.	Name=Tassel_length;B73v2_pos=2:220149456;1allele=A/G;version=Hapmap2;RS=rs827733982;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	227194420	227194519	.	+	.	Name=Cob_diameter;B73v2_pos=2:220458582;1allele=G/T;version=Hapmap2;RS=rs724692954;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	227286168	227286267	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:220512519;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	227288228	227288327	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:220514579;1allele=A/C;version=Hapmap2;RS=rs846517993;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	227303335	227303434	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:220578673;1allele=C/T;version=Hapmap2;RS=rs812336695;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	227344295	227344394	.	+	.	Name=Ear_height;B73v2_pos=2:220591919;1allele=A/G;version=Hapmap2;RS=rs1061661606;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	227344346	227344445	.	+	.	Name=Stalk_strength;B73v2_pos=2:220591970;1allele=G/A;version=Hapmap2;RS=rs828008910;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	227403889	227403988	.	+	.	Name=Ear_height;B73v2_pos=2:220644353;1allele=A/T;version=Hapmap2;RS=rs276932604;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	227409606	227409705	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:220650070;1allele=G/A;version=Hapmap2;RS=rs843913176;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	227415140	227415239	.	+	.	Name=Ear_height;B73v2_pos=2:220655604;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	228041029	228041128	.	+	.	Name=Ear_height;B73v2_pos=2:221528078;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	228223978	228224077	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:221743240;1allele=G/C;version=Hapmap1;RS=rs835323457;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	228505921	228506020	.	+	.	Name=Tassel_length;B73v2_pos=2:222021643;1allele=C/T;version=Hapmap2;RS=rs727053840;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	228741867	228741966	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:207781275;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	228789840	228789939	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:222303049;1allele=G/C;version=Hapmap2;RS=rs132004125;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	228806053	228806152	.	+	.	Name=Cob_diameter;B73v2_pos=2:222318348;1allele=G/T;version=Hapmap2;RS=rs806976264;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	228835624	228835723	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:222335906;1allele=G/T;version=Hapmap2;RS=rs132004160;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	228955372	228955471	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:222440444;1allele=G/A;version=Hapmap2;RS=rs276936453;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	228955372	228955471	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:222440444;1allele=G/A;version=Hapmap2;RS=rs276936453;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	229148960	229149059	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:222640143;1allele=T/G;version=Hapmap2;RS=rs1064679472;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	229149271	229149370	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:222640454;1allele=A/G;version=Hapmap2;RS=rs276937085;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	229149323	229149422	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:222640506;1allele=T/C;version=Hapmap2;RS=rs1064010886;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	229155863	229155962	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:222647048;1allele=T/G;version=Hapmap2;RS=rs820656673;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	229183387	229183450	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:222650476;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	229189450	229189549	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:222656572;1allele=A/G;version=Hapmap2;RS=rs276937156;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	229200457	229200556	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:222667579;1allele=G/A;version=Hapmap2;RS=rs836380267;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	229231824	229231923	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:222698790;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	229231885	229231985	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:222698852;1allele=G/A;version=Hapmap2;RS=rs810674573;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	229247494	229247593	.	+	.	Name=Leaf_length;B73v2_pos=2:222714427;1allele=C/T;version=Hapmap2;RS=rs823050126;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	229267087	229267185	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:222734023;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	229292191	229292290	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:222759132;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	229364040	229364139	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:222829376;1allele=A/T;version=Hapmap2;RS=rs811822535;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	229412148	229412247	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:222866036;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	229412163	229412262	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:222866021;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	229539360	229539459	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:222961692;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	229561906	229562005	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:223024041;1allele=A/G;version=Hapmap2;RS=rs1061588970;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	229563582	229563681	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:223025719;1allele=C/T;version=Hapmap2;RS=rs819311650;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	229564825	229564924	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:223026962;1allele=C/A;version=Hapmap2;RS=rs276938271;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	229564825	229564924	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:223026962;1allele=C/A;version=Hapmap2;RS=rs276938271;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	229572612	229572711	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:223034749;1allele=C/T;version=Hapmap2;RS=rs129238513;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	229591892	229591991	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:223053220;1allele=T/C;version=Hapmap2;RS=rs819738917;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	229591892	229591991	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:223053220;1allele=T/C;version=Hapmap2;RS=rs819738917;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	229710978	229711077	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:223172287;1allele=G/C;version=Hapmap2;RS=rs1061195187;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	229827204	229827303	.	+	.	Name=Cob_diameter;B73v2_pos=2:223286820;1allele=A/C;version=Hapmap2;RS=rs812530674;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	229923568	229923667	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:223328445;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	230019427	230019526	.	+	.	Name=Cob_diameter;B73v2_pos=2:223474028;1allele=G/A;version=Hapmap2;RS=rs847665866;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	230439177	230439276	.	+	.	Name=Cob_diameter;B73v2_pos=2:223889660;1allele=C/G;version=Hapmap2;RS=rs824363174;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	230495449	230495548	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:223945976;1allele=G/A;version=Hapmap2;RS=rs808764295;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	230498209	230498308	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:223948736;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	230519130	230519229	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:223969657;1allele=C/T;version=Hapmap2;RS=rs839154980;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	230534078	230534177	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:223984605;1allele=A/T;version=Hapmap2;RS=rs807320690;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	230606413	230606512	.	+	.	Name=Days_to_silk;B73v2_pos=2:224057611;1allele=A/C;version=Hapmap2;RS=rs725718322;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	230614357	230614456	.	+	.	Name=Days_to_silk;B73v2_pos=2:224064017;1allele=A/G;version=Hapmap2;RS=rs132006039;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	230614357	230614456	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:224064017;1allele=A/G;version=Hapmap2;RS=rs132006039;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	230618646	230618745	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:224068306;1allele=C/A;version=Hapmap2;RS=rs1064290811;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	230634892	230634991	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:224084553;1allele=G/C;version=Hapmap2;RS=rs847132650;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	230780220	230780319	.	+	.	Name=Cob_diameter;B73v2_pos=2:224230027;1allele=C/T;version=Hapmap2;RS=rs276940946;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	230785508	230785607	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:224235314;1allele=C/T;version=Hapmap2;RS=rs129241527;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	230787051	230787150	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:224236857;1allele=T/C;version=Hapmap2;RS=rs820705918;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	230831161	230831260	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:224297141;1allele=G/A;version=Hapmap2;RS=rs840491355;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	230831161	230831260	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:224297141;1allele=G/A;version=Hapmap2;RS=rs840491355;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	230937706	230937805	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:224385803;1allele=/AGCCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	231061546	231061645	.	+	.	Name=Days_to_silk;B73v2_pos=2:224500934;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	231075587	231075686	.	+	.	Name=Days_to_silk;B73v2_pos=2:224521527;1allele=T/C;version=Hapmap2;RS=rs833086199;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	231118240	231118339	.	+	.	Name=Ear_row_number;B73v2_pos=2:224564172;1allele=A/G;version=Hapmap2;RS=rs129242083;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	231130614	231130713	.	+	.	Name=Cob_diameter;B73v2_pos=2:224576636;1allele=C/T;version=Hapmap2;RS=rs806446958;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	231366349	231366448	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:224932077;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	231371937	231372036	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:224926487;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	231452880	231452979	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:224982239;1allele=G/C;version=Hapmap2;RS=rs129242609;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	231468925	231469024	.	+	.	Name=Ear_height;B73v2_pos=2:224997296;1allele=T/G;version=Hapmap2;RS=rs129242700;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	231544630	231544729	.	+	.	Name=Ear_height;B73v2_pos=2:225090468;1allele=A/G;version=Hapmap2;RS=rs725609189;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	231546959	231547058	.	+	.	Name=Tassel_length;B73v2_pos=2:225088138;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	231607097	231607196	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225114426;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	231664155	231664254	.	+	.	Name=Cob_diameter;B73v2_pos=2:225262165;1allele=T/C;version=Hapmap2;RS=rs826727173;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	231709587	231709686	.	+	.	Name=Cob_diameter;B73v2_pos=2:225307578;1allele=C/T;version=Hapmap2;RS=rs276943053;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	231814130	231814229	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225363362;1allele=A/G;version=Hapmap2;RS=rs276943233;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	231818576	231818675	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225367808;1allele=T/C;version=Hapmap2;RS=rs1064727692;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	231830139	231830238	.	+	.	Name=Cob_diameter;B73v2_pos=2:225379838;1allele=C/T;version=Hapmap2;RS=rs842046952;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	231849687	231849786	.	+	.	Name=Ear_height;B73v2_pos=2:225399385;1allele=A/G;version=Hapmap2;RS=rs276943546;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	231850939	231851038	.	+	.	Name=Cob_diameter;B73v2_pos=2:225400637;1allele=T/C;version=Hapmap1;RS=rs132007169;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	231854106	231854205	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:225403804;1allele=A/G;version=Hapmap2;RS=rs276943589;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	231855180	231855279	.	+	.	Name=Cob_diameter;B73v2_pos=2:225404878;1allele=G/A;version=Hapmap2;RS=rs850309060;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	231857565	231857664	.	+	.	Name=Ear_height;B73v2_pos=2:225407265;1allele=A/G;version=Hapmap2;RS=rs276943614;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	231860073	231860172	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:225409773;1allele=G/A;version=Hapmap2;RS=rs834796422;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	231861083	231861182	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:225410783;1allele=A/G;version=Hapmap2;RS=rs805243785;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	231926305	231926404	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225511330;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	231967032	231967131	.	+	.	Name=Ear_row_number;B73v2_pos=2:225537282;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	232027147	232027246	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225581518;1allele=/CTCGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	232027147	232027246	.	+	.	Name=Ear_height;B73v2_pos=2:225581518;1allele=/CTCGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	232046618	232046717	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225600990;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	232054737	232054836	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:225609109;1allele=G/C;version=Hapmap1;RS=rs132007313;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	232068161	232068260	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:225622533;1allele=A/G;version=Hapmap2;RS=rs129243439;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	232267349	232267448	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:225807941;1allele=G/T;version=Hapmap1;RS=rs132007504;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	232267944	232268043	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:225808536;1allele=G/C;version=Hapmap1;RS=rs132007516;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	232313029	232313128	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225857839;1allele=G/A;version=Hapmap2;RS=rs129243683;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	232371542	232371641	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:225916143;1allele=G/A;version=Hapmap2;RS=rs129243882;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	232596727	232596826	.	+	.	Name=Days_to_silk;B73v2_pos=2:226130394;1allele=G/A;version=Hapmap2;RS=rs850121353;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	232632761	232632860	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:226166430;1allele=T/C;version=Hapmap2;RS=rs842123895;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	232692146	232692245	.	+	.	Name=Ear_row_number;B73v2_pos=2:226204222;1allele=C/T;version=Hapmap2;RS=rs276944318;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	232692393	232692492	.	+	.	Name=Ear_row_number;B73v2_pos=2:226204469;1allele=T/C;version=Hapmap2;RS=rs129244733;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	232799820	232799919	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:226326998;1allele=G/C;version=Hapmap1;RS=rs847496957;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	232800178	232800277	.	+	.	Name=Ear_row_number;B73v2_pos=2:226327356;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	232834890	232834989	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:226367061;1allele=G/A;version=Hapmap2;RS=rs129245103;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	232840412	232840511	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:226372583;1allele=C/G;version=Hapmap2;RS=rs804792280;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	232841316	232841415	.	+	.	Name=Days_to_silk;B73v2_pos=2:226373487;1allele=C/T;version=Hapmap2;RS=rs276944549;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	232841531	232841630	.	+	.	Name=Days_to_silk;B73v2_pos=2:226373702;1allele=T/C;version=Hapmap2;RS=rs808452930;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	232890347	232890446	.	+	.	Name=Cob_diameter;B73v2_pos=2:226423235;1allele=C/T;version=Hapmap2;RS=rs276944681;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	232915663	232915762	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:226448819;1allele=G/A;version=Hapmap2;RS=rs129245409;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	232918289	232918388	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:226451445;1allele=G/A;version=Hapmap2;RS=rs129245432;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	233015792	233015891	.	+	.	Name=Days_to_silk;B73v2_pos=2:226549582;1allele=C/T;version=Hapmap1;RS=rs132008145;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	233053731	233053830	.	+	.	Name=Leaf_length;B73v2_pos=2:226591728;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	233148193	233148292	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:226684318;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	233759867	233759966	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:227329798;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	233916589	233916688	.	+	.	Name=Ear_height;B73v2_pos=2:227476369;1allele=A/G;version=Hapmap2;RS=rs830706097;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	234427584	234427681	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:227983076;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	234462185	234462284	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:228017715;1allele=G/A;version=Hapmap2;RS=rs806744304;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	234655264	234655363	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:228206752;1allele=C/T;version=Hapmap2;RS=rs817856455;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	234771537	234771636	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:228385326;1allele=A/G;version=Hapmap2;RS=rs839014918;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	235038608	235038707	.	+	.	Name=Ear_row_number;B73v2_pos=2:228735011;1allele=T/C;version=Hapmap2;RS=rs848181229;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	235055816	235055915	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:228752219;1allele=T/C;version=Hapmap2;RS=rs814560857;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	235057770	235057869	.	+	.	Name=Ear_row_number;B73v2_pos=2:228754173;1allele=T/C;version=Hapmap2;RS=rs1061603018;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	235137684	235137783	.	+	.	Name=Ear_height;B73v2_pos=2:228809776;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235190972	235191071	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:228940099;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235192967	235193066	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:228938104;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235193893	235193992	.	+	.	Name=Ear_row_number;B73v2_pos=2:228937178;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235194712	235194811	.	+	.	Name=Ear_row_number;B73v2_pos=2:228936359;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235232220	235232319	.	+	.	Name=Ear_height;B73v2_pos=2:228898765;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235239302	235239401	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:228870373;1allele=C/T;version=Hapmap2;RS=rs132009098;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	235246372	235246471	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:228877443;1allele=C/A;version=Hapmap2;RS=rs129248123;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	235264884	235264983	.	+	.	Name=Ear_row_number;B73v2_pos=2:228867338;1allele=C/T;version=Hapmap2;RS=rs1062586806;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	235284030	235284129	.	+	.	Name=Ear_height;B73v2_pos=2:228958246;1allele=T/G;version=Hapmap2;RS=rs809582759;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	235305697	235305796	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:229036941;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235417736	235417835	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:229079753;1allele=G/T;version=Hapmap2;RS=rs835424768;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	235453651	235453750	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:229118388;1allele=G/A;version=Hapmap2;RS=rs821533724;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	235458719	235458818	.	+	.	Name=Ear_row_number;B73v2_pos=2:229123456;1allele=T/C;version=Hapmap2;RS=rs129248444;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	235578618	235578717	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:229243613;1allele=G/C;version=Hapmap2;RS=rs808943606;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	235580670	235580769	.	+	.	Name=Stalk_strength;B73v2_pos=2:229245665;1allele=C/T;version=Hapmap2;RS=rs132009505;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	235592126	235592225	.	+	.	Name=Stalk_strength;B73v2_pos=2:229257122;1allele=G/A;version=Hapmap2;RS=rs817295758;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	235682019	235682118	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:229341451;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	235750002	235750101	.	+	.	Name=Leaf_length;B73v2_pos=2:229409561;1allele=G/A;version=Hapmap2;RS=rs842886586;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	235816440	235816539	.	+	.	Name=Ear_row_number;B73v2_pos=2:229475889;1allele=A/G;version=Hapmap2;RS=rs129249340;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	235817330	235817429	.	+	.	Name=Ear_row_number;B73v2_pos=2:229476779;1allele=A/G;version=Hapmap2;RS=rs132009739;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	235819835	235819934	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=2:229479284;1allele=C/T;version=Hapmap2;RS=rs276948032;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	235821154	235821253	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:229480603;1allele=G/C;version=Hapmap2;RS=rs129249369;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	235942315	235942414	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:229587596;1allele=+/-;version=Hapmap2;RS=rs806871110;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	235942315	235942414	.	+	.	Name=Ear_height;B73v2_pos=2:229587596;1allele=+/-;version=Hapmap2;RS=rs806871110;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	236078808	236078907	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229718466;1allele=G/A;version=Hapmap2;RS=rs809673318;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	236079284	236079383	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229718942;1allele=A/C;version=Hapmap2;RS=rs819170740;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	236080689	236080788	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:229720347;1allele=T/G;version=Hapmap2;RS=rs726356623;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	236080689	236080788	.	+	.	Name=Ear_height;B73v2_pos=2:229720347;1allele=T/G;version=Hapmap2;RS=rs726356623;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	236080912	236081011	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:229720570;1allele=A/G;version=Hapmap2;RS=rs727091154;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	236081228	236081327	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229720886;1allele=C/T;version=Hapmap2;RS=rs724534316;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	236081886	236081985	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229721544;1allele=G/A;version=Hapmap2;RS=rs129249687;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	236082429	236082528	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229722087;1allele=A/G;version=Hapmap2;RS=rs830320367;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	236084733	236084832	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229724391;1allele=G/A;version=Hapmap2;RS=rs129249701;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	236094603	236094702	.	+	.	Name=Ear_height;B73v2_pos=2:229734262;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	236121199	236121298	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229760859;1allele=A/T;version=Hapmap2;RS=rs808092827;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	236126037	236126136	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:229765580;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	236161958	236162057	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229801798;1allele=T/C;version=Hapmap2;RS=rs129249838;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	236162455	236162554	.	+	.	Name=Ear_height;B73v2_pos=2:229802295;1allele=G/A;version=Hapmap2;RS=rs276948283;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	236162455	236162554	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229802295;1allele=G/A;version=Hapmap2;RS=rs276948283;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	236162532	236162631	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229802372;1allele=G/T;version=Hapmap2;RS=rs276948285;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	236164319	236164418	.	+	.	Name=Ear_height;B73v2_pos=2:229804159;1allele=A/G;version=Hapmap2;RS=rs132010037;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	236164352	236164451	.	+	.	Name=Ear_height;B73v2_pos=2:229804192;1allele=C/T;version=Hapmap2;RS=rs129249869;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	236164365	236164464	.	+	.	Name=Ear_height;B73v2_pos=2:229804205;1allele=A/G;version=Hapmap2;RS=rs129249870;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	236164486	236164585	.	+	.	Name=Ear_height;B73v2_pos=2:229804326;1allele=T/C;version=Hapmap2;RS=rs132010039;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	236182391	236182490	.	+	.	Name=Stalk_strength;B73v2_pos=2:229822231;1allele=G/A;version=Hapmap2;RS=rs838344176;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	236286550	236286649	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:229927349;1allele=G/A;version=Hapmap2;RS=rs129250318;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	236286550	236286649	.	+	.	Name=Ear_height;B73v2_pos=2:229927349;1allele=G/A;version=Hapmap2;RS=rs129250318;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	236301832	236301931	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:229942631;1allele=C/T;version=Hapmap2;RS=rs129250328;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	236334599	236334698	.	+	.	Name=Ear_row_number;B73v2_pos=2:229984200;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	236334905	236335004	.	+	.	Name=Ear_row_number;B73v2_pos=2:229984506;1allele=T/A;version=Hapmap2;RS=rs276948568;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	236336973	236337072	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229986574;1allele=A/G;version=Hapmap2;RS=rs820807645;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	236337327	236337426	.	+	.	Name=Ear_height;B73v2_pos=2:229986928;1allele=C/T;version=Hapmap2;RS=rs810171083;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	236337327	236337426	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:229986928;1allele=C/T;version=Hapmap2;RS=rs810171083;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	236344815	236344914	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:229994354;1allele=G/A;version=Hapmap2;RS=rs132010227;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	236345002	236345101	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:229994541;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	236393993	236394092	.	+	.	Name=Leaf_length;B73v2_pos=2:230035156;1allele=T/C;version=Hapmap2;RS=rs803949400;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	236669369	236669468	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:230291547;1allele=G/T;version=Hapmap2;RS=rs817558124;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	236763533	236763632	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:230384839;1allele=G/C;version=Hapmap2;RS=rs129250885;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	236792201	236792300	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:230413504;1allele=A/G;version=Hapmap1;RS=rs132010386;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	236792880	236792979	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:230414183;1allele=G/A;version=Hapmap1;RS=rs132010394;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	236793129	236793228	.	+	.	Name=Ear_height;B73v2_pos=2:230414432;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	236920201	236920300	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:230541298;1allele=C/G;version=Hapmap2;RS=rs842649248;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	236952061	236952160	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:230573159;1allele=A/G;version=Hapmap2;RS=rs845780734;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	237020456	237020555	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:230641562;1allele=C/T;version=Hapmap2;RS=rs846730378;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	237022129	237022228	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:230644866;1allele=G/A;version=Hapmap2;RS=rs809237964;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	237078814	237078913	.	+	.	Name=Ear_row_number;B73v2_pos=2:230707115;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	237086566	237086665	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:230714867;1allele=G/C;version=Hapmap2;RS=rs842386288;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	237102960	237103059	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:230731261;1allele=G/A;version=Hapmap2;RS=rs823305712;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	237187089	237187188	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:230811701;1allele=A/T;version=Hapmap2;RS=rs830247412;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	237237281	237237380	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:230862125;1allele=T/G;version=Hapmap2;RS=rs276949569;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	237251924	237252023	.	+	.	Name=Stalk_strength;B73v2_pos=2:230876768;1allele=G/A;version=Hapmap2;RS=rs829150772;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	237263854	237263953	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:230888203;1allele=A/C;version=Hapmap1;RS=rs132010666;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	237312438	237312537	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:230936825;1allele=A/G;version=Hapmap2;RS=rs725862351;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	237430026	237430125	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:231212669;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	237502606	237502705	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:231285244;1allele=G/A;version=Hapmap2;RS=rs1062122518;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	237509066	237509165	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:231291704;1allele=T/C;version=Hapmap2;RS=rs129252169;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	237509102	237509201	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:231291740;1allele=T/G;version=Hapmap2;RS=rs832506849;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	237509469	237509568	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:231292107;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	237577692	237577791	.	+	.	Name=Cob_diameter;B73v2_pos=2:231360274;1allele=C/G;version=Hapmap1;RS=rs129252439;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	237681020	237681119	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:231464978;1allele=A/G;version=Hapmap2;RS=rs849998092;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	237751850	237751949	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:231535448;1allele=C/T;version=Hapmap2;RS=rs276950927;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	237825830	237825929	.	+	.	Name=Leaf_length;B73v2_pos=2:231602620;1allele=C/T;version=Hapmap2;RS=rs808103284;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238182849	238182948	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:231943890;1allele=C/T;version=Hapmap2;RS=rs276951727;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	238220915	238221014	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:231985662;1allele=G/A;version=Hapmap2;RS=rs828989164;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	238221323	238221422	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:231986070;1allele=C/G;version=Hapmap1;RS=rs132011560;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238233131	238233230	.	+	.	Name=Leaf_length;B73v2_pos=2:231997889;1allele=A/G;version=Hapmap2;RS=rs129253792;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	238234385	238234484	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:231999143;1allele=G/A;version=Hapmap2;RS=rs812706671;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	238262050	238262149	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232026807;1allele=A/T;version=Hapmap2;RS=rs828229573;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	238263725	238263824	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:232028482;1allele=C/T;version=Hapmap2;RS=rs831466386;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	238278957	238279056	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:232043717;1allele=T/C;version=Hapmap2;RS=rs823509965;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238279734	238279833	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:232044494;1allele=C/T;version=Hapmap2;RS=rs809053437;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	238347926	238348025	.	+	.	Name=Leaf_length;B73v2_pos=2:232117920;1allele=A/G;version=Hapmap2;RS=rs848200733;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	238399546	238399645	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232161816;1allele=T/C;version=Hapmap2;RS=rs821295619;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	238400411	238400510	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232162681;1allele=A/G;version=Hapmap2;RS=rs812198218;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	238400492	238400591	.	+	.	Name=Ear_height;B73v2_pos=2:232162762;1allele=G/A;version=Hapmap2;RS=rs826272847;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	238401114	238401213	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232163384;1allele=T/C;version=Hapmap2;RS=rs276952276;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	238402892	238402991	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232165162;1allele=C/T;version=Hapmap2;RS=rs848391516;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238496292	238496391	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:232266336;1allele=G/C;version=Hapmap2;RS=rs132011762;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	238580057	238580156	.	+	.	Name=Leaf_length;B73v2_pos=2:232350270;1allele=T/A;version=Hapmap2;RS=rs840032038;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	238595464	238595563	.	+	.	Name=Leaf_length;B73v2_pos=2:232364354;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	238596027	238596126	.	+	.	Name=Leaf_length;B73v2_pos=2:232364917;1allele=C/T;version=Hapmap1;RS=rs129254422;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238598887	238598986	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:232367777;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	238607805	238607904	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:232376698;1allele=C/T;version=Hapmap2;RS=rs823302211;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238619636	238619735	.	+	.	Name=Leaf_length;B73v2_pos=2:232388529;1allele=G/A;version=Hapmap2;RS=rs276952749;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	238692323	238692422	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:232461407;1allele=C/A;version=Hapmap2;RS=rs129254737;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	238709228	238709327	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232478312;1allele=C/T;version=Hapmap2;RS=rs727002858;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238712919	238713018	.	+	.	Name=Leaf_length;B73v2_pos=2:232482003;1allele=T/G;version=Hapmap2;RS=rs132012279;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	238721154	238721253	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:232490244;1allele=G/A;version=Hapmap2;RS=rs132012343;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	238740680	238740779	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:232509774;1allele=C/A;version=Hapmap2;RS=rs276953304;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	238741691	238741790	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:232510785;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	238743214	238743313	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:232512307;1allele=G/A;version=Hapmap2;RS=rs724695655;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	238756234	238756333	.	+	.	Name=Leaf_length;B73v2_pos=2:232525327;1allele=A/G;version=Hapmap2;RS=rs817873850;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	238810502	238810601	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232575971;1allele=A/G;version=Hapmap1;RS=rs132012463;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	238828550	238828649	.	+	.	Name=Ear_height;B73v2_pos=2:232594019;1allele=T/C;version=Hapmap2;RS=rs129255262;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	238906556	238906655	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:232670926;1allele=T/C;version=Hapmap2;RS=rs276953765;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	238950255	238950354	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:232715543;1allele=T/C;version=Hapmap2;RS=rs276953812;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	238952991	238953090	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232718279;1allele=A/C;version=Hapmap2;RS=rs829100256;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	238953299	238953398	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:232718587;1allele=A/G;version=Hapmap2;RS=rs129255491;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	239197121	239197220	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:232968431;1allele=A/G;version=Hapmap2;RS=rs846571852;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	239200594	239200693	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:232971904;1allele=C/T;version=Hapmap2;RS=rs129255770;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	239240094	239240193	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:233011407;1allele=T/C;version=Hapmap2;RS=rs129255836;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	239305447	239305546	.	+	.	Name=Ear_height;B73v2_pos=2:233083115;1allele=G/A;version=Hapmap2;RS=rs821172334;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	239305707	239305806	.	+	.	Name=Glutamate;B73v2_pos=2:233083375;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	239319056	239319155	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:233096726;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	239327432	239327531	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:233105102;1allele=C/A;version=Hapmap2;RS=rs806561533;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	239331252	239331351	.	+	.	Name=Nitrate;B73v2_pos=2:233108922;1allele=G/A;version=Hapmap2;RS=rs844038533;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	239408193	239408292	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:233185872;1allele=A/G;version=Hapmap2;RS=rs823991441;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	239477515	239477614	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233257607;1allele=T/G;version=Hapmap2;RS=rs811922345;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	239494269	239494368	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233274362;1allele=T/C;version=Hapmap2;RS=rs806561091;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	239504623	239504722	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233284716;1allele=T/C;version=Hapmap2;RS=rs838691428;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	239505154	239505253	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233285247;1allele=C/T;version=Hapmap2;RS=rs801654267;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	239507587	239507686	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233287680;1allele=T/C;version=Hapmap2;RS=rs826697953;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	239507792	239507891	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233287885;1allele=T/A;version=Hapmap2;RS=rs835918446;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	239580449	239580548	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233356676;1allele=C/T;version=Hapmap2;RS=rs846539699;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	239605787	239605886	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:233395043;1allele=C/A;version=Hapmap2;RS=rs825439273;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	239659214	239659313	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233437241;1allele=C/T;version=Hapmap2;RS=rs840814685;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	239694798	239694897	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233472573;1allele=C/T;version=Hapmap2;RS=rs847690757;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	239700216	239700315	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:233477992;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	239760601	239760700	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:233551393;1allele=C/T;version=Hapmap2;RS=rs814538767;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	239784563	239784662	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:233571461;1allele=G/A;version=Hapmap2;RS=rs834017501;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	239798235	239798334	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233585137;1allele=C/T;version=Hapmap1;RS=rs132013565;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	239803334	239803433	.	+	.	Name=Height_above_ear;B73v2_pos=2:233590236;1allele=/AG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	239803395	239803494	.	+	.	Name=Height_above_ear;B73v2_pos=2:233590297;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	239845344	239845443	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:233632247;1allele=C/G;version=Hapmap2;RS=rs827944046;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	239890437	239890536	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:233674991;1allele=T/C;version=Hapmap2;RS=rs724274443;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	239975387	239975486	.	+	.	Name=Nitrate;B73v2_pos=2:233760192;1allele=C/T;version=Hapmap2;RS=rs845956985;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	240007707	240007806	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:233799644;1allele=A/C;version=Hapmap2;RS=rs835239257;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	240097390	240097489	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:233882013;1allele=C/A;version=Hapmap2;RS=rs836346126;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	240126479	240126578	.	+	.	Name=Stalk_strength;B73v2_pos=2:233911103;1allele=A/T;version=Hapmap1;RS=rs132014494;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	240197087	240197186	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:233979200;1allele=C/T;version=Hapmap2;RS=rs129257826;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	240215471	240215570	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:233997586;1allele=A/G;version=Hapmap2;RS=rs1063741705;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	240248297	240248396	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234030877;1allele=A/G;version=Hapmap1;RS=rs829908915;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240248297	240248396	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:234030877;1allele=C/T;version=Hapmap2;RS=rs829908915;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240267685	240267784	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:234049224;1allele=G/C;version=Hapmap2;RS=rs129257587;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	240269970	240270069	.	+	.	Name=Tassel_length;B73v2_pos=2:234051509;1allele=C/G;version=Hapmap2;RS=rs129257604;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	240279636	240279735	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:234061177;1allele=A/G;version=Hapmap2;RS=rs811911243;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	240321902	240322001	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:234103219;1allele=G/T;version=Hapmap2;RS=rs276956093;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	240323403	240323502	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:234104720;1allele=C/T;version=Hapmap2;RS=rs132014811;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240331631	240331730	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:234113566;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240331658	240331757	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:234113593;1allele=G/A;version=Hapmap2;RS=rs276956185;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	240367251	240367350	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:234153098;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240391699	240391798	.	+	.	Name=Stalk_strength;B73v2_pos=2:234167074;1allele=T/C;version=Hapmap2;RS=rs836316003;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240415707	240415806	.	+	.	Name=Tassel_length;B73v2_pos=2:234191334;1allele=T/C;version=Hapmap2;RS=rs840709328;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	240427694	240427792	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:234203207;1allele=G/A;version=Hapmap2;RS=rs132014917;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	240429789	240429888	.	+	.	Name=Stalk_strength;B73v2_pos=2:234205303;1allele=G/A;version=Hapmap2;RS=rs845745165;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	240432800	240432899	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:234208314;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240454842	240454941	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234230356;1allele=AGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240454844	240454943	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234230358;1allele=/AGTA;version=Hapmap1;RS=rs832602926;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	240456504	240456603	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234232018;1allele=T/C;version=Hapmap2;RS=rs849322529;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240456636	240456735	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234232150;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240456665	240456764	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234232179;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240477666	240477765	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234253181;1allele=A/G;version=Hapmap2;RS=rs276956378;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	240477910	240478009	.	+	.	Name=Ear_height;B73v2_pos=2:234253425;1allele=A/C;version=Hapmap2;RS=rs132015078;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	240484968	240485067	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:234260484;1allele=C/T;version=Hapmap2;RS=rs276956398;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240490157	240490256	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:234265673;1allele=C/G;version=Hapmap1;RS=rs1061682646;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	240640009	240640108	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:234409512;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240643597	240643696	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:234413100;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240643812	240643911	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:234413315;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240657216	240657315	.	+	.	Name=Stalk_strength;B73v2_pos=2:234433270;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240657282	240657381	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:234433336;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240664745	240664844	.	+	.	Name=Nitrate;B73v2_pos=2:234440799;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240667856	240667955	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234443910;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240753309	240753408	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234525028;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240753709	240753808	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234530135;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240759030	240759129	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234530749;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240759304	240759403	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234531023;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240759304	240759403	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234531023;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240759795	240759894	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:234531514;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240759795	240759894	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234531514;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761029	240761128	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:234532690;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761287	240761386	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:234532948;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761337	240761436	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:234532998;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761337	240761436	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234532998;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761358	240761457	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:234533019;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761603	240761702	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234533264;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761603	240761702	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234533264;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761603	240761702	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:234533264;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240761723	240761822	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234533384;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240792232	240792331	.	+	.	Name=Height_above_ear;B73v2_pos=2:234571952;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240792323	240792422	.	+	.	Name=Glutamate;B73v2_pos=2:234572043;1allele=C/T;version=Hapmap2;RS=rs824849334;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	240903054	240903153	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:234685291;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240903054	240903153	.	+	.	Name=Glutamate;B73v2_pos=2:234685291;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240903787	240903886	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:234686024;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240924861	240924960	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234707098;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240924873	240924972	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234707110;1allele=T/G;version=Hapmap2;RS=rs276956965;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	240924919	240925018	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234707156;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240925094	240925193	.	+	.	Name=Ear_height;B73v2_pos=2:234707331;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240925663	240925762	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234707900;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240927150	240927249	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:234709387;1allele=A/G;version=Hapmap2;RS=rs833236762;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	240933718	240933817	.	+	.	Name=Nitrate;B73v2_pos=2:234715955;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240939896	240939995	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:234722133;1allele=T/G;version=Hapmap2;RS=rs276957042;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240939958	240940057	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:234722195;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240940860	240940959	.	+	.	Name=Glutamate;B73v2_pos=2:234723097;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240942934	240943033	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:234725171;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	240945691	240945790	.	+	.	Name=Ear_height;B73v2_pos=2:234727928;1allele=G/A;version=Hapmap2;RS=rs826854537;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	240948172	240948271	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:234730409;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241143719	241143818	.	+	.	Name=Nitrate;B73v2_pos=2:237034790;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241177704	241177803	.	+	.	Name=Stalk_strength;B73v2_pos=2:237005034;1allele=C/G;version=Hapmap2;RS=rs132017294;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	241207638	241207737	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:236973308;1allele=ATGGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241207751	241207849	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:236973195;1allele=T/G;version=Hapmap1;RS=rs132017252;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	241209100	241209199	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236971845;1allele=C/G;version=Hapmap2;RS=rs129261274;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	241214156	241214255	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236966789;1allele=A/C;version=Hapmap2;RS=rs276960121;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	241214381	241214480	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236966564;1allele=A/G;version=Hapmap1;RS=rs132017197;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241214396	241214495	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236966549;1allele=G/C;version=Hapmap2;RS=rs276960117;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	241214540	241214639	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:236966405;1allele=G/A;version=Hapmap2;RS=rs129261257;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241217603	241217702	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:236963342;1allele=A/G;version=Hapmap2;RS=rs132017182;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241239582	241239681	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:236870954;1allele=G/A;version=Hapmap2;RS=rs837040264;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241242949	241243048	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:236867587;1allele=C/T;version=Hapmap2;RS=rs840517129;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241295591	241295690	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236817812;1allele=G/A;version=Hapmap2;RS=rs129261167;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241295714	241295813	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236817689;1allele=A/T;version=Hapmap2;RS=rs129261164;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	241298295	241298394	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236815108;1allele=A/-;version=Hapmap1;RS=rs132017139;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241299138	241299237	.	+	.	Name=Stalk_strength;B73v2_pos=2:236814265;1allele=A/C;version=Hapmap2;RS=rs132017131;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241302065	241302164	.	+	.	Name=Height_above_ear;B73v2_pos=2:236811339;1allele=A/C;version=Hapmap2;RS=rs821481978;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	241302198	241302297	.	+	.	Name=Stalk_strength;B73v2_pos=2:236811206;1allele=C/A;version=Hapmap2;RS=rs847637149;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	241302272	241302371	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:236811132;1allele=C/T;version=Hapmap2;RS=rs848175620;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	241302272	241302371	.	+	.	Name=Height_above_ear;B73v2_pos=2:236811132;1allele=C/T;version=Hapmap2;RS=rs848175620;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	241302276	241302375	.	+	.	Name=Height_above_ear;B73v2_pos=2:236811128;1allele=G/C;version=Hapmap2;RS=rs818696685;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	241302383	241302482	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236811021;1allele=G/A;version=Hapmap1;RS=rs132017123;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241315487	241315586	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236797916;1allele=C/T;version=Hapmap2;RS=rs840988537;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	241315535	241315634	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236797868;1allele=A/G;version=Hapmap2;RS=rs129261110;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241315949	241316048	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236797454;1allele=A/G;version=Hapmap2;RS=rs813887275;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241317322	241317421	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236796081;1allele=A/G;version=Hapmap2;RS=rs129261103;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241501701	241501800	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236618859;1allele=G/A;version=Hapmap2;RS=rs1060841402;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241503323	241503422	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236617237;1allele=A/G;version=Hapmap2;RS=rs129261001;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241503560	241503659	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236617000;1allele=G/A;version=Hapmap2;RS=rs276959760;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241505827	241505926	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236614733;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241506249	241506348	.	+	.	Name=Height_above_ear;B73v2_pos=2:236614311;1allele=C/T;version=Hapmap1;RS=rs132016956;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	241509873	241509972	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236610687;1allele=T/C;version=Hapmap2;RS=rs129261043;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241509873	241509972	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:236610687;1allele=T/C;version=Hapmap2;RS=rs129261043;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241511229	241511328	.	+	.	Name=Ear_height;B73v2_pos=2:236609331;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241511454	241511553	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:236609106;1allele=T/C;version=Hapmap2;RS=rs129261056;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	241512210	241512309	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:236608350;1allele=A/T;version=Hapmap1;RS=rs132017037;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	241526302	241526401	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:236597721;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241526302	241526401	.	+	.	Name=Ear_height;B73v2_pos=2:236597721;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241645842	241645941	.	+	.	Name=Stalk_strength;B73v2_pos=2:236487966;1allele=T/G;version=Hapmap2;RS=rs132016773;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	241648276	241648375	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236485532;1allele=G/A;version=Hapmap1;RS=rs129260864;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	241649174	241649273	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:236484634;1allele=A/C;version=Hapmap2;RS=rs276959629;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	241662908	241663007	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236470895;1allele=G/T;version=Hapmap2;RS=rs132016915;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	241714803	241714902	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236419299;1allele=/GGCCGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241726272	241726371	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:236409061;1allele=G/C;version=Hapmap2;RS=rs132016759;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	241727939	241728038	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:236407394;1allele=C/G;version=Hapmap2;RS=rs843924925;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	241775053	241775152	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236355135;1allele=C/A;version=Hapmap2;RS=rs805064511;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	241776240	241776339	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:236353948;1allele=A/G;version=Hapmap2;RS=rs276959423;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	241776314	241776413	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236353874;1allele=A/C;version=Hapmap2;RS=rs727482446;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	241819074	241819173	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236298614;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241819248	241819347	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236298440;1allele=A/T;version=Hapmap2;RS=rs132016582;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	241822260	241822359	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:236295428;1allele=C/T;version=Hapmap2;RS=rs1062951280;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241822260	241822359	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236295428;1allele=C/T;version=Hapmap2;RS=rs1062951280;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241822892	241822991	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236294796;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241851302	241851401	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236267518;1allele=G/T;version=Hapmap2;RS=rs276959225;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	241851915	241852014	.	+	.	Name=Plant_height;B73v2_pos=2:236266905;1allele=G/A;version=Hapmap2;RS=rs842646461;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241864783	241864882	.	+	.	Name=Height_above_ear;B73v2_pos=2:236254021;1allele=A/G;version=Hapmap2;RS=rs276959204;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	241865275	241865374	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:236253529;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	241865872	241865971	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236252932;1allele=T/C;version=Hapmap1;RS=rs132016503;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241865872	241865971	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:236252932;1allele=T/C;version=Hapmap1;RS=rs132016503;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241867726	241867825	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236251078;1allele=T/C;version=Hapmap2;RS=rs1061784567;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241869296	241869395	.	+	.	Name=Leaf_length;B73v2_pos=2:236249508;1allele=C/G;version=Hapmap2;RS=rs830488255;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	241873950	241874049	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236244854;1allele=A/G;version=Hapmap2;RS=rs129260664;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241874225	241874324	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236244579;1allele=C/T;version=Hapmap2;RS=rs276959165;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241884874	241884973	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236233930;1allele=A/C;version=Hapmap2;RS=rs1064428080;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	241885029	241885128	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:236233775;1allele=C/A;version=Hapmap2;RS=rs129260624;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	241888697	241888796	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:236230113;1allele=G/A;version=Hapmap2;RS=rs129260617;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241888734	241888833	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:236230076;1allele=C/T;version=Hapmap2;RS=rs129260616;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	241888837	241888936	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236229973;1allele=G/T;version=Hapmap2;RS=rs802712629;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	241890244	241890343	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:236228566;1allele=C/G;version=Hapmap2;RS=rs828894078;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	241890253	241890352	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:236228557;1allele=G/A;version=Hapmap2;RS=rs828410641;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241890253	241890352	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236228557;1allele=G/A;version=Hapmap2;RS=rs828410641;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	241890334	241890433	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236228476;1allele=C/T;version=Hapmap2;RS=rs834289902;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	241890389	241890488	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236228421;1allele=T/A;version=Hapmap2;RS=rs276959137;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	241890463	241890562	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:236228347;1allele=A/T;version=Hapmap2;RS=rs724700353;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	241891807	241891906	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:236227003;1allele=A/G;version=Hapmap2;RS=rs848258255;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242090838	242090937	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:236031775;1allele=T/C;version=Hapmap2;RS=rs848147397;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	242091364	242091463	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:236031249;1allele=G/T;version=Hapmap2;RS=rs822558567;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	242092485	242092584	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:236030128;1allele=G/A;version=Hapmap2;RS=rs804193965;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242093087	242093186	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:236029600;1allele=A/G;version=Hapmap2;RS=rs132016378;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242093087	242093186	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:236029600;1allele=A/G;version=Hapmap2;RS=rs132016378;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242093087	242093186	.	+	.	Name=Height_above_ear;B73v2_pos=2:236029600;1allele=A/G;version=Hapmap2;RS=rs132016378;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242116953	242117052	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:236005909;1allele=A/G;version=Hapmap2;RS=rs814760365;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242191884	242191983	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:235930441;1allele=A/G;version=Hapmap2;RS=rs129260475;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242192063	242192162	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:235930262;1allele=A/T;version=Hapmap2;RS=rs821184842;2ref_allele=A;3alt_allele=T
chr2	Wallace_2014	SNP	242192154	242192253	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:235930171;1allele=A/G;version=Hapmap2;RS=rs276958874;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242197425	242197524	.	+	.	Name=Ear_height;B73v2_pos=2:235924900;1allele=T/A;version=Hapmap2;RS=rs276958849;2ref_allele=T;3alt_allele=A
chr2	Wallace_2014	SNP	242198147	242198246	.	+	.	Name=Ear_height;B73v2_pos=2:235924178;1allele=A/G;version=Hapmap2;RS=rs725036843;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242202193	242202292	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:235920132;1allele=G/T;version=Hapmap2;RS=rs129260426;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	242230898	242230997	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:235892078;1allele=G/A;version=Hapmap2;RS=rs809670270;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242231441	242231540	.	+	.	Name=Nodes_to_ear;B73v2_pos=2:235891535;1allele=A/G;version=Hapmap1;RS=rs132016169;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242255614	242255713	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:235875974;1allele=A/G;version=Hapmap2;RS=rs825186810;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242271963	242272062	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235859623;1allele=G/A;version=Hapmap2;RS=rs1061184873;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242280827	242280926	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:235850759;1allele=T/C;version=Hapmap2;RS=rs276958776;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	242282056	242282155	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:235849530;1allele=T/C;version=Hapmap2;RS=rs276958755;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	242282056	242282155	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235849530;1allele=T/C;version=Hapmap2;RS=rs276958755;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	242282063	242282162	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235849523;1allele=A/T;version=Hapmap2;RS=rs276958754;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	242316306	242316405	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235809162;1allele=G/T;version=Hapmap2;RS=rs129260272;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	242316306	242316405	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:235809162;1allele=G/T;version=Hapmap2;RS=rs129260272;2ref_allele=T;3alt_allele=G
chr2	Wallace_2014	SNP	242316940	242317039	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235808528;1allele=A/C;version=Hapmap2;RS=rs276958584;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	242317874	242317973	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:235807594;1allele=A/G;version=Hapmap2;RS=rs129260258;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242318251	242318350	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=2:235807217;1allele=G/A;version=Hapmap2;RS=rs276958573;2ref_allele=A;3alt_allele=G
chr2	Wallace_2014	SNP	242346004	242346103	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235779463;1allele=C/A;version=Hapmap2;RS=rs276958522;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	242435855	242435954	.	+	.	Name=Glutamate;B73v2_pos=2:235689614;1allele=G/A;version=Hapmap2;RS=rs276958481;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242436676	242436775	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=2:235688793;1allele=A/C;version=Hapmap2;RS=rs844049448;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	242441099	242441198	.	+	.	Name=Glutamate;B73v2_pos=2:235684370;1allele=C/T;version=Hapmap2;RS=rs276958455;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	242472168	242472267	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:235659511;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	242472200	242472299	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:235659479;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	242480132	242480231	.	+	.	Name=Nitrate;B73v2_pos=2:235641042;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	242481072	242481171	.	+	.	Name=Glutamate;B73v2_pos=2:235641982;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	242506403	242506502	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:235622336;1allele=G/A;version=Hapmap2;RS=rs801846059;2ref_allele=G;3alt_allele=A
chr2	Wallace_2014	SNP	242531950	242532049	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:235596787;1allele=T/C;version=Hapmap2;RS=rs129259819;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	242720232	242720331	.	+	.	Name=Nitrate;B73v2_pos=2:235424865;1allele=C/G;version=Hapmap2;RS=rs837061682;2ref_allele=C;3alt_allele=G
chr2	Wallace_2014	SNP	242726695	242726794	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:235418630;1allele=A/C;version=Hapmap2;RS=rs129259563;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	242749250	242749348	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:235384844;1allele=A/G;version=Hapmap2;RS=rs818689358;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	242909646	242909745	.	+	.	Name=Ear_height;B73v2_pos=2:235228832;1allele=G/C;version=Hapmap2;RS=rs849234775;2ref_allele=G;3alt_allele=C
chr2	Wallace_2014	SNP	242914428	242914527	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235224048;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr2	Wallace_2014	SNP	242915170	242915269	.	+	.	Name=Leaf_length;B73v2_pos=2:235223306;1allele=G/T;version=Hapmap2;RS=rs276957712;2ref_allele=G;3alt_allele=T
chr2	Wallace_2014	SNP	242938652	242938751	.	+	.	Name=Ear_height;B73v2_pos=2:235199294;1allele=C/A;version=Hapmap2;RS=rs822941710;2ref_allele=C;3alt_allele=A
chr2	Wallace_2014	SNP	243003957	243004056	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=2:235148924;1allele=C/T;version=Hapmap2;RS=rs129259237;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	243004696	243004795	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:235148185;1allele=C/T;version=Hapmap2;RS=rs276957617;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	243009109	243009208	.	+	.	Name=Nitrate;B73v2_pos=2:235143772;1allele=A/C;version=Hapmap2;RS=rs846279910;2ref_allele=A;3alt_allele=C
chr2	Wallace_2014	SNP	243204739	243204838	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:234920117;1allele=T/C;version=Hapmap2;RS=rs276957270;2ref_allele=T;3alt_allele=C
chr2	Wallace_2014	SNP	243277382	243277481	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:234836686;1allele=C/T;version=Hapmap2;RS=rs833950796;2ref_allele=C;3alt_allele=T
chr2	Wallace_2014	SNP	243289931	243290030	.	+	.	Name=Nodes_above_ear;B73v2_pos=2:234824137;1allele=G/T;version=Hapmap2;RS=rs834184075;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	49500	49599	.	+	.	Name=Fructose;B73v2_pos=3:21613;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190960	191059	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:160937;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	754976	755075	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:722977;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	860217	860316	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:835382;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	1334117	1334216	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:1223297;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	1420933	1421032	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:1318001;1allele=A/G;version=Hapmap2;RS=rs850134759;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	1429442	1429541	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:1326943;1allele=G/T;version=Hapmap1;RS=rs131364343;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	1586740	1586839	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:1463987;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	1605722	1605821	.	+	.	Name=Fructose;B73v2_pos=3:1482976;1allele=T/C;version=Hapmap1;RS=rs131364651;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	1645760	1645859	.	+	.	Name=Height_above_ear;B73v2_pos=3:1522464;1allele=G/A;version=Hapmap2;RS=rs276961069;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	1658371	1658470	.	+	.	Name=Height_above_ear;B73v2_pos=3:1535376;1allele=A/G;version=Hapmap2;RS=rs811614894;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	1660681	1660780	.	+	.	Name=Height_above_ear;B73v2_pos=3:1537686;1allele=C/A;version=Hapmap2;RS=rs801624575;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	1673197	1673296	.	+	.	Name=Fructose;B73v2_pos=3:1550202;1allele=T/A;version=Hapmap2;RS=rs814940422;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	1681336	1681435	.	+	.	Name=Sucrose;B73v2_pos=3:1558341;1allele=G/C;version=Hapmap2;RS=rs836403252;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	1719462	1719561	.	+	.	Name=Sucrose;B73v2_pos=3:1596484;1allele=A/G;version=Hapmap2;RS=rs843326647;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	1738800	1738899	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:1614270;1allele=A/G;version=Hapmap2;RS=rs808930883;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	1740080	1740179	.	+	.	Name=Leaf_length;B73v2_pos=3:1615550;1allele=C/T;version=Hapmap2;RS=rs276961365;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	1804837	1804936	.	+	.	Name=Leaf_length;B73v2_pos=3:1680320;1allele=C/T;version=Hapmap2;RS=rs831650234;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	1854862	1854961	.	+	.	Name=Leaf_length;B73v2_pos=3:1729880;1allele=C/G;version=Hapmap2;RS=rs131365271;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	1891945	1892044	.	+	.	Name=Leaf_length;B73v2_pos=3:1766974;1allele=C/A;version=Hapmap2;RS=rs841039310;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	1893737	1893836	.	+	.	Name=Leaf_length;B73v2_pos=3:1768765;1allele=C/A;version=Hapmap2;RS=rs276961538;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	2103237	2103336	.	+	.	Name=Starch;B73v2_pos=3:1973745;1allele=A/C;version=Hapmap2;RS=rs846236858;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	2128687	2128786	.	+	.	Name=Cob_diameter;B73v2_pos=3:1999018;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	2191931	2192030	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:2061992;1allele=A/G;version=Hapmap2;RS=rs131365714;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	2240336	2240435	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:2110397;1allele=T/C;version=Hapmap2;RS=rs727240804;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	2249470	2249569	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:2119531;1allele=C/T;version=Hapmap2;RS=rs836347992;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2252871	2252970	.	+	.	Name=Leaf_length;B73v2_pos=3:2122932;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	2253476	2253575	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:2123537;1allele=T/C;version=Hapmap2;RS=rs846058166;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	2254058	2254157	.	+	.	Name=Leaf_length;B73v2_pos=3:2124119;1allele=G/A;version=Hapmap1;RS=rs131366089;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	2272438	2272537	.	+	.	Name=Leaf_length;B73v2_pos=3:2142427;1allele=C/T;version=Hapmap1;RS=rs131366228;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2274843	2274942	.	+	.	Name=Leaf_length;B73v2_pos=3:2144832;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	2274923	2275022	.	+	.	Name=Leaf_length;B73v2_pos=3:2144912;1allele=C/T;version=Hapmap1;RS=rs131366290;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2283204	2283303	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:2153192;1allele=G/C;version=Hapmap2;RS=rs276962151;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	2306448	2306547	.	+	.	Name=Starch;B73v2_pos=3:2177005;1allele=G/A;version=Hapmap2;RS=rs834667628;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	2354935	2355034	.	+	.	Name=Tassel_length;B73v2_pos=3:2225327;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	2427176	2427275	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:2292029;1allele=T/C;version=Hapmap1;RS=rs131366672;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	2437040	2437139	.	+	.	Name=Leaf_length;B73v2_pos=3:2383657;1allele=T/C;version=Hapmap2;RS=rs131366636;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2497646	2497745	.	+	.	Name=Ear_row_number;B73v2_pos=3:2444232;1allele=C/T;version=Hapmap2;RS=rs726831336;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2504460	2504559	.	+	.	Name=Starch;B73v2_pos=3:2451046;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	2504460	2504559	.	+	.	Name=Sucrose;B73v2_pos=3:2451046;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	2511485	2511584	.	+	.	Name=Sucrose;B73v2_pos=3:2458071;1allele=A/T;version=Hapmap2;RS=rs129422622;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	2599852	2599951	.	+	.	Name=Total_amino_acids;B73v2_pos=3:2545929;1allele=A/G;version=Hapmap2;RS=rs836524511;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	2651097	2651196	.	+	.	Name=Starch;B73v2_pos=3:2597173;1allele=A/G;version=Hapmap2;RS=rs820436641;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	2654841	2654940	.	+	.	Name=Ear_row_number;B73v2_pos=3:2600917;1allele=G/A;version=Hapmap2;RS=rs129568642;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	2660457	2660556	.	+	.	Name=Leaf_length;B73v2_pos=3:2606533;1allele=G/A;version=Hapmap2;RS=rs812769744;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	2720748	2720847	.	+	.	Name=Total_amino_acids;B73v2_pos=3:2667795;1allele=T/C;version=Hapmap2;RS=rs850326402;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	2726797	2726896	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:2673846;1allele=C/T;version=Hapmap2;RS=rs129597075;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	2736922	2737021	.	+	.	Name=Cob_diameter;B73v2_pos=3:2683971;1allele=G/A;version=Hapmap1;RS=rs131367210;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	2739466	2739565	.	+	.	Name=Fructose;B73v2_pos=3:2686515;1allele=G/C;version=Hapmap2;RS=rs129586394;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	2740222	2740321	.	+	.	Name=Sucrose;B73v2_pos=3:2687271;1allele=A/G;version=Hapmap2;RS=rs276962776;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	2771940	2772039	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:2783595;1allele=T/C;version=Hapmap2;RS=rs129448752;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2808142	2808241	.	+	.	Name=Sucrose;B73v2_pos=3:2729047;1allele=T/C;version=Hapmap2;RS=rs846462892;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	2808397	2808496	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:2729302;1allele=T/C;version=Hapmap2;RS=rs816134624;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	2809575	2809674	.	+	.	Name=Leaf_length;B73v2_pos=3:2730480;1allele=T/G;version=Hapmap2;RS=rs827857286;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	2809648	2809747	.	+	.	Name=Sucrose;B73v2_pos=3:2730553;1allele=T/G;version=Hapmap2;RS=rs842571982;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	2819960	2820059	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:2741195;1allele=G/T;version=Hapmap2;RS=rs826099917;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	2834471	2834570	.	+	.	Name=Tassel_length;B73v2_pos=3:2755706;1allele=A/G;version=Hapmap2;RS=rs833603660;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	2840120	2840219	.	+	.	Name=Height_above_ear;B73v2_pos=3:2761341;1allele=C/G;version=Hapmap2;RS=rs131367476;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	2843440	2843539	.	+	.	Name=Height_above_ear;B73v2_pos=3:2800076;1allele=G/A;version=Hapmap2;RS=rs1064093160;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	2845668	2845767	.	+	.	Name=Leaf_length;B73v2_pos=3:2802304;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	2855550	2855649	.	+	.	Name=Leaf_length;B73v2_pos=3:2812186;1allele=G/C;version=Hapmap1;RS=rs129414226;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	2855583	2855682	.	+	.	Name=Leaf_length;B73v2_pos=3:2812219;1allele=C/A;version=Hapmap1;RS=rs131367717;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	2855651	2855750	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:2812287;1allele=C/T;version=Hapmap2;RS=rs131367720;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2855726	2855825	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:2812362;1allele=C/T;version=Hapmap2;RS=rs131367726;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	2856071	2856170	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:2812707;1allele=G/C;version=Hapmap2;RS=rs131367745;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	2856138	2856237	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:2812774;1allele=T/C;version=Hapmap2;RS=rs129266228;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3008645	3008744	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:2957042;1allele=C/T;version=Hapmap1;RS=rs129493792;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3085014	3085113	.	+	.	Name=Plant_height;B73v2_pos=3:3074084;1allele=A/C;version=Hapmap2;RS=rs812780223;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	3085014	3085113	.	+	.	Name=Height_above_ear;B73v2_pos=3:3074084;1allele=A/C;version=Hapmap2;RS=rs812780223;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	3155609	3155708	.	+	.	Name=Height_above_ear;B73v2_pos=3:3107436;1allele=A/G;version=Hapmap2;RS=rs129586442;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	3167199	3167298	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:3119034;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	3216287	3216386	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:3173680;1allele=T/G;version=Hapmap2;RS=rs843655362;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	3248063	3248162	.	+	.	Name=Height_above_ear;B73v2_pos=3:3200173;1allele=A/G;version=Hapmap2;RS=rs815172554;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	3558010	3558109	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:3504572;1allele=C/T;version=Hapmap1;RS=rs824494308;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3560504	3560603	.	+	.	Name=Leaf_width;B73v2_pos=3:3507066;1allele=G/T;version=Hapmap2;RS=rs129526851;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	3572711	3572810	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:3519279;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	3608926	3609025	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:3555502;1allele=GCCG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	3612646	3612745	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:3559222;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	3634195	3634294	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:3580784;1allele=G/A;version=Hapmap2;RS=rs831704147;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	3670832	3670931	.	+	.	Name=Leaf_width;B73v2_pos=3:3620265;1allele=T/A;version=Hapmap2;RS=rs822707319;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	3768715	3768814	.	+	.	Name=Leaf_width;B73v2_pos=3:3714737;1allele=A/G;version=Hapmap2;RS=rs276964130;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	3803600	3803699	.	+	.	Name=Ear_height;B73v2_pos=3:3747523;1allele=C/G;version=Hapmap2;RS=rs821891529;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	3864083	3864182	.	+	.	Name=Starch;B73v2_pos=3:3798149;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	3897218	3897317	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:3820301;1allele=G/T;version=Hapmap2;RS=rs276964256;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	3898754	3898853	.	+	.	Name=Fructose;B73v2_pos=3:3821837;1allele=C/G;version=Hapmap1;RS=rs131369746;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3900743	3900842	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:3823826;1allele=A/G;version=Hapmap2;RS=rs276964274;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	3900860	3900959	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:3823943;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	3901600	3901699	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:3824683;1allele=T/G;version=Hapmap2;RS=rs845363149;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	3903472	3903571	.	+	.	Name=Plant_height;B73v2_pos=3:3826555;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	3903622	3903721	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:3826705;1allele=G/A;version=Hapmap2;RS=rs836109732;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	3903848	3903947	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:3826931;1allele=C/T;version=Hapmap2;RS=rs131369808;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3907436	3907535	.	+	.	Name=Starch;B73v2_pos=3:3830519;1allele=C/T;version=Hapmap1;RS=rs129581418;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3908925	3909024	.	+	.	Name=Plant_height;B73v2_pos=3:3832008;1allele=C/T;version=Hapmap2;RS=rs131369853;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3909225	3909324	.	+	.	Name=Starch;B73v2_pos=3:3832308;1allele=C/G;version=Hapmap2;RS=rs131369856;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3909764	3909863	.	+	.	Name=Starch;B73v2_pos=3:3832847;1allele=C/T;version=Hapmap2;RS=rs816378813;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3910250	3910349	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:3833333;1allele=G/A;version=Hapmap2;RS=rs1064250085;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	3911288	3911387	.	+	.	Name=Starch;B73v2_pos=3:3834371;1allele=A/G;version=Hapmap2;RS=rs129269743;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	3913175	3913274	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:3836258;1allele=C/T;version=Hapmap2;RS=rs131178352;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	3922555	3922654	.	+	.	Name=Plant_height;B73v2_pos=3:3845638;1allele=G/A;version=Hapmap2;RS=rs812458564;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	3962442	3962541	.	+	.	Name=Plant_height;B73v2_pos=3:3885530;1allele=G/A;version=Hapmap1;RS=rs131369963;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	3968131	3968230	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:3891219;1allele=A/G;version=Hapmap2;RS=rs847547679;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4031855	4031954	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:3955585;1allele=G/A;version=Hapmap2;RS=rs845351389;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4063801	4063900	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:3987530;1allele=/TA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4063801	4063900	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:3987530;1allele=/TA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4064160	4064259	.	+	.	Name=Starch;B73v2_pos=3:3987889;1allele=T/C;version=Hapmap2;RS=rs276964728;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4065829	4065928	.	+	.	Name=Starch;B73v2_pos=3:3989558;1allele=C/T;version=Hapmap2;RS=rs813794508;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4086315	4086414	.	+	.	Name=Height_above_ear;B73v2_pos=3:4013437;1allele=T/C;version=Hapmap2;RS=rs840431085;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4198071	4198170	.	+	.	Name=Plant_height;B73v2_pos=3:4128513;1allele=A/G;version=Hapmap2;RS=rs825918485;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4223779	4223878	.	+	.	Name=Height_above_ear;B73v2_pos=3:4154228;1allele=C/A;version=Hapmap2;RS=rs823050240;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4224057	4224156	.	+	.	Name=Tassel_length;B73v2_pos=3:4154506;1allele=G/T;version=Hapmap2;RS=rs725460194;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	4254698	4254797	.	+	.	Name=Leaf_width;B73v2_pos=3:4185156;1allele=T/G;version=Hapmap2;RS=rs803831787;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	4270954	4271053	.	+	.	Name=Leaf_length;B73v2_pos=3:4201413;1allele=G/A;version=Hapmap2;RS=rs803394863;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4277884	4277983	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4208345;1allele=C/T;version=Hapmap2;RS=rs834395843;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4277906	4278005	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4208367;1allele=G/T;version=Hapmap2;RS=rs836871197;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	4277991	4278090	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4208452;1allele=G/A;version=Hapmap2;RS=rs849083346;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4403423	4403522	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:4333178;1allele=G/A;version=Hapmap2;RS=rs832987847;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4407039	4407138	.	+	.	Name=Height_above_ear;B73v2_pos=3:4336794;1allele=C/G;version=Hapmap2;RS=rs724721451;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	4408683	4408782	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4338438;1allele=T/A;version=Hapmap2;RS=rs129541767;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	4408683	4408782	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4338438;1allele=T/A;version=Hapmap2;RS=rs129541767;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	4408683	4408782	.	+	.	Name=Height_above_ear;B73v2_pos=3:4338438;1allele=T/A;version=Hapmap2;RS=rs129541767;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	4409246	4409345	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:4339001;1allele=A/G;version=Hapmap2;RS=rs823153905;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4411462	4411561	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:4341217;1allele=G/A;version=Hapmap2;RS=rs727288577;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4413071	4413170	.	+	.	Name=Plant_height;B73v2_pos=3:4342826;1allele=G/A;version=Hapmap1;RS=rs129391594;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4413913	4414012	.	+	.	Name=Height_above_ear;B73v2_pos=3:4343668;1allele=G/A;version=Hapmap2;RS=rs131370650;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4493523	4493622	.	+	.	Name=Starch;B73v2_pos=3:4430198;1allele=C/T;version=Hapmap2;RS=rs822861291;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4547359	4547458	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:4482581;1allele=G/A;version=Hapmap2;RS=rs847674776;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4583617	4583716	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4524582;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4583617	4583716	.	+	.	Name=Plant_height;B73v2_pos=3:4524582;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4583617	4583716	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4524582;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4598336	4598435	.	+	.	Name=Plant_height;B73v2_pos=3:4531439;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4598336	4598435	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4531439;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4598827	4598926	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4531930;1allele=G/A;version=Hapmap2;RS=rs843744090;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4598839	4598938	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4531942;1allele=T/G;version=Hapmap2;RS=rs816021176;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	4598839	4598938	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4531942;1allele=T/G;version=Hapmap2;RS=rs816021176;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	4598872	4598971	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4531975;1allele=G/A;version=Hapmap2;RS=rs805139987;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4598887	4598986	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4531990;1allele=T/C;version=Hapmap2;RS=rs850017855;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4599382	4599481	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4532485;1allele=C/G;version=Hapmap2;RS=rs835303938;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	4599999	4600098	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4533102;1allele=G/A;version=Hapmap2;RS=rs131371129;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4609343	4609442	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4542440;1allele=C/T;version=Hapmap1;RS=rs131370993;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	4609343	4609442	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4542440;1allele=C/T;version=Hapmap1;RS=rs131370993;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	4611321	4611420	.	+	.	Name=Plant_height;B73v2_pos=3:4544418;1allele=T/C;version=Hapmap2;RS=rs837378556;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4613329	4613428	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4546426;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4613886	4613985	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4546983;1allele=A/G;version=Hapmap1;RS=rs131370914;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4613886	4613985	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4546983;1allele=A/G;version=Hapmap1;RS=rs131370914;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4614329	4614428	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4547426;1allele=C/T;version=Hapmap2;RS=rs131370898;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4614666	4614765	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:4547763;1allele=G/C;version=Hapmap1;RS=rs131370891;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	4617135	4617234	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:4550232;1allele=A/T;version=Hapmap2;RS=rs129563325;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	4620206	4620305	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4553303;1allele=C/T;version=Hapmap2;RS=rs276965411;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4620206	4620305	.	+	.	Name=Plant_height;B73v2_pos=3:4553303;1allele=C/T;version=Hapmap2;RS=rs276965411;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4719214	4719313	.	+	.	Name=Leaf_width;B73v2_pos=3:4654073;1allele=G/A;version=Hapmap2;RS=rs821238982;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4721096	4721195	.	+	.	Name=Plant_height;B73v2_pos=3:4655955;1allele=A/G;version=Hapmap2;RS=rs276965495;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4724202	4724301	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:4659053;1allele=A/T;version=Hapmap2;RS=rs811772315;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	4729666	4729765	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:4664516;1allele=A/G;version=Hapmap2;RS=rs131371209;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4731122	4731221	.	+	.	Name=Leaf_length;B73v2_pos=3:4665972;1allele=/GG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4774749	4774848	.	+	.	Name=Ear_height;B73v2_pos=3:4709514;1allele=C/T;version=Hapmap2;RS=rs131371522;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4774749	4774848	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4709514;1allele=C/T;version=Hapmap2;RS=rs131371522;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4777223	4777322	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4711988;1allele=G/A;version=Hapmap1;RS=rs131371534;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4777226	4777325	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4711991;1allele=A/G;version=Hapmap1;RS=rs131371535;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4780212	4780311	.	+	.	Name=Glucose;B73v2_pos=3:4714977;1allele=T/G;version=Hapmap1;RS=rs131371580;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	4780313	4780412	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:4715078;1allele=A/C;version=Hapmap1;RS=rs131371586;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4780506	4780605	.	+	.	Name=Leaf_width;B73v2_pos=3:4715263;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4789364	4789463	.	+	.	Name=Leaf_width;B73v2_pos=3:4724121;1allele=A/C;version=Hapmap2;RS=rs131371680;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4791176	4791275	.	+	.	Name=Tassel_length;B73v2_pos=3:4725933;1allele=A/C;version=Hapmap2;RS=rs276965767;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	4802151	4802250	.	+	.	Name=Leaf_width;B73v2_pos=3:4735446;1allele=T/C;version=Hapmap2;RS=rs129601912;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4912157	4912256	.	+	.	Name=Plant_height;B73v2_pos=3:4837149;1allele=T/A;version=Hapmap2;RS=rs1064038914;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	4912157	4912256	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:4837149;1allele=T/A;version=Hapmap2;RS=rs1064038914;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	4948656	4948755	.	+	.	Name=Fructose;B73v2_pos=3:4873694;1allele=G/C;version=Hapmap2;RS=rs129613479;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4948772	4948871	.	+	.	Name=Fructose;B73v2_pos=3:4873810;1allele=T/C;version=Hapmap2;RS=rs129396858;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	4955445	4955544	.	+	.	Name=Glucose;B73v2_pos=3:4880483;1allele=G/A;version=Hapmap2;RS=rs129555212;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4955482	4955581	.	+	.	Name=Fructose;B73v2_pos=3:4880520;1allele=C/T;version=Hapmap2;RS=rs129338831;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4955482	4955581	.	+	.	Name=Glucose;B73v2_pos=3:4880520;1allele=C/T;version=Hapmap2;RS=rs129338831;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4957538	4957637	.	+	.	Name=Fructose;B73v2_pos=3:4882576;1allele=T/A;version=Hapmap2;RS=rs276966124;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	4957682	4957781	.	+	.	Name=Ear_height;B73v2_pos=3:4882720;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	4957930	4958029	.	+	.	Name=Fructose;B73v2_pos=3:4882968;1allele=C/T;version=Hapmap2;RS=rs276966130;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4960460	4960559	.	+	.	Name=Glucose;B73v2_pos=3:4885491;1allele=A/T;version=Hapmap2;RS=rs131372029;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	4963932	4964031	.	+	.	Name=Fructose;B73v2_pos=3:4888964;1allele=G/A;version=Hapmap2;RS=rs129566156;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4966644	4966743	.	+	.	Name=Fructose;B73v2_pos=3:4891676;1allele=A/G;version=Hapmap2;RS=rs276966191;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4967443	4967542	.	+	.	Name=Fructose;B73v2_pos=3:4892475;1allele=G/A;version=Hapmap2;RS=rs727136010;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	4967949	4968048	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:4892981;1allele=A/G;version=Hapmap2;RS=rs129436512;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	4969069	4969168	.	+	.	Name=Fructose;B73v2_pos=3:4894101;1allele=T/A;version=Hapmap1;RS=rs131372040;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	4969069	4969168	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:4894101;1allele=T/A;version=Hapmap1;RS=rs131372040;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	4969856	4969955	.	+	.	Name=Fructose;B73v2_pos=3:4894888;1allele=A/T;version=Hapmap2;RS=rs276966218;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	4971781	4971880	.	+	.	Name=Fructose;B73v2_pos=3:4896813;1allele=A/G;version=Hapmap2;RS=rs276966233;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5133926	5134025	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5180047;1allele=C/A;version=Hapmap2;RS=rs808353830;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	5134099	5134198	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5180220;1allele=C/T;version=Hapmap2;RS=rs832448186;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5179586	5179685	.	+	.	Name=Glucose;B73v2_pos=3:5241815;1allele=C/T;version=Hapmap1;RS=rs131372172;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5211754	5211853	.	+	.	Name=Glucose;B73v2_pos=3:5273076;1allele=T/C;version=Hapmap2;RS=rs820973355;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5222526	5222625	.	+	.	Name=Glucose;B73v2_pos=3:5283847;1allele=A/G;version=Hapmap2;RS=rs1061577239;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5222769	5222868	.	+	.	Name=Glucose;B73v2_pos=3:5284090;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	5222796	5222895	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:5284117;1allele=A/G;version=Hapmap2;RS=rs1064572606;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5223299	5223398	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:5284620;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	5227244	5227343	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5288565;1allele=G/T;version=Hapmap2;RS=rs131372192;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	5234192	5234291	.	+	.	Name=Plant_height;B73v2_pos=3:5295513;1allele=C/T;version=Hapmap2;RS=rs276966402;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	5234192	5234291	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5295513;1allele=C/T;version=Hapmap2;RS=rs276966402;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	5234319	5234418	.	+	.	Name=Fructose;B73v2_pos=3:5295640;1allele=G/T;version=Hapmap2;RS=rs1062033895;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	5234360	5234459	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5295681;1allele=C/T;version=Hapmap1;RS=rs131372209;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5239809	5239908	.	+	.	Name=Tassel_length;B73v2_pos=3:5299002;1allele=A/G;version=Hapmap1;RS=rs276966414;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5240065	5240163	.	+	.	Name=Ear_height;B73v2_pos=3:5299258;1allele=C/T;version=Hapmap1;RS=rs131372307;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5260123	5260222	.	+	.	Name=Ear_height;B73v2_pos=3:5319314;1allele=A/T;version=Hapmap2;RS=rs276966428;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	5260123	5260222	.	+	.	Name=Plant_height;B73v2_pos=3:5319314;1allele=A/T;version=Hapmap2;RS=rs276966428;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	5260389	5260488	.	+	.	Name=Ear_height;B73v2_pos=3:5319580;1allele=T/C;version=Hapmap2;RS=rs276966432;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5265366	5265465	.	+	.	Name=Ear_height;B73v2_pos=3:5324557;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	5273688	5273787	.	+	.	Name=Plant_height;B73v2_pos=3:5332879;1allele=T/G;version=Hapmap2;RS=rs847012497;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	5274003	5274102	.	+	.	Name=Ear_height;B73v2_pos=3:5333194;1allele=G/C;version=Hapmap2;RS=rs276966475;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	5275326	5275425	.	+	.	Name=Ear_height;B73v2_pos=3:5334516;1allele=A/G;version=Hapmap2;RS=rs131372462;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	5278553	5278652	.	+	.	Name=Ear_height;B73v2_pos=3:5337739;1allele=C/A;version=Hapmap2;RS=rs129283401;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	5279193	5279292	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5338379;1allele=C/G;version=Hapmap2;RS=rs129482615;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	5333063	5333162	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5393189;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	5334370	5334469	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5394496;1allele=G/A;version=Hapmap2;RS=rs1061337974;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5368374	5368473	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5427978;1allele=C/G;version=Hapmap1;RS=rs131372579;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	5368374	5368473	.	+	.	Name=Plant_height;B73v2_pos=3:5427978;1allele=C/G;version=Hapmap1;RS=rs131372579;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	5368374	5368473	.	+	.	Name=Leaf_width;B73v2_pos=3:5427978;1allele=C/G;version=Hapmap2;RS=rs131372579;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	5368996	5369095	.	+	.	Name=Plant_height;B73v2_pos=3:5428600;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	5370843	5370942	.	+	.	Name=Ear_height;B73v2_pos=3:5430447;1allele=A/G;version=Hapmap2;RS=rs276966741;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5371691	5371790	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:5431295;1allele=A/C;version=Hapmap2;RS=rs276966753;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	5442810	5442909	.	+	.	Name=Leaf_width;B73v2_pos=3:5498418;1allele=A/T;version=Hapmap2;RS=rs810833512;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	5512119	5512218	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5568237;1allele=G/A;version=Hapmap2;RS=rs129305031;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5524444	5524543	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5580561;1allele=T/C;version=Hapmap2;RS=rs726005737;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	5525163	5525262	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:5581280;1allele=A/C;version=Hapmap1;RS=rs129273295;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	5525166	5525265	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:5581283;1allele=T/C;version=Hapmap2;RS=rs131372859;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	5526923	5527022	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5583040;1allele=C/T;version=Hapmap2;RS=rs276967296;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5529256	5529355	.	+	.	Name=Plant_height;B73v2_pos=3:5585371;1allele=C/G;version=Hapmap2;RS=rs840508051;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	5530438	5530537	.	+	.	Name=Leaf_width;B73v2_pos=3:5586553;1allele=T/C;version=Hapmap1;RS=rs131372925;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	5532593	5532692	.	+	.	Name=Height_above_ear;B73v2_pos=3:5588708;1allele=G/A;version=Hapmap2;RS=rs727391854;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5561309	5561408	.	+	.	Name=Nitrate;B73v2_pos=3:5617664;1allele=G/C;version=Hapmap2;RS=rs846513713;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	5615226	5615325	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5671462;1allele=G/A;version=Hapmap2;RS=rs131184057;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5645101	5645200	.	+	.	Name=Leaf_width;B73v2_pos=3:5701896;1allele=A/G;version=Hapmap2;RS=rs816541891;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5645524	5645623	.	+	.	Name=Protein;B73v2_pos=3:5702319;1allele=C/T;version=Hapmap2;RS=rs725337281;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5681301	5681400	.	+	.	Name=Leaf_width;B73v2_pos=3:5738097;1allele=C/T;version=Hapmap2;RS=rs832394143;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5692230	5692329	.	+	.	Name=Leaf_width;B73v2_pos=3:5749026;1allele=G/A;version=Hapmap1;RS=rs131373110;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5696844	5696943	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:5753640;1allele=C/T;version=Hapmap2;RS=rs724516935;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5698834	5698933	.	+	.	Name=Tassel_length;B73v2_pos=3:5755630;1allele=A/G;version=Hapmap2;RS=rs846091975;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5705553	5705652	.	+	.	Name=Leaf_length;B73v2_pos=3:5762351;1allele=G/A;version=Hapmap2;RS=rs823643375;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5717030	5717129	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:5773829;1allele=A/T;version=Hapmap2;RS=rs838411645;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	5717030	5717129	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:5773829;1allele=A/T;version=Hapmap2;RS=rs838411645;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	5728730	5728829	.	+	.	Name=Ear_height;B73v2_pos=3:5785528;1allele=A/G;version=Hapmap2;RS=rs833206533;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5728730	5728829	.	+	.	Name=Plant_height;B73v2_pos=3:5785528;1allele=A/G;version=Hapmap2;RS=rs833206533;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5728730	5728829	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5785528;1allele=A/G;version=Hapmap2;RS=rs833206533;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5729293	5729392	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5786089;1allele=G/A;version=Hapmap2;RS=rs817247040;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5729293	5729392	.	+	.	Name=Plant_height;B73v2_pos=3:5786089;1allele=G/A;version=Hapmap2;RS=rs817247040;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5729309	5729408	.	+	.	Name=Plant_height;B73v2_pos=3:5786105;1allele=G/A;version=Hapmap2;RS=rs848176145;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5729475	5729574	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:5786271;1allele=A/G;version=Hapmap1;RS=rs129526410;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5729475	5729574	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5786271;1allele=G/A;version=Hapmap2;RS=rs129526410;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5729475	5729574	.	+	.	Name=Plant_height;B73v2_pos=3:5786271;1allele=G/A;version=Hapmap2;RS=rs129526410;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5729475	5729574	.	+	.	Name=Ear_height;B73v2_pos=3:5786271;1allele=G/A;version=Hapmap2;RS=rs129526410;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5729691	5729790	.	+	.	Name=Ear_height;B73v2_pos=3:5786487;1allele=A/G;version=Hapmap2;RS=rs276967951;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5729691	5729790	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:5786487;1allele=A/G;version=Hapmap2;RS=rs276967951;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5729835	5729934	.	+	.	Name=Ear_height;B73v2_pos=3:5786631;1allele=C/T;version=Hapmap2;RS=rs276967953;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	5754414	5754513	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:5811844;1allele=A/T;version=Hapmap1;RS=rs131373290;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	5756093	5756192	.	+	.	Name=Ear_height;B73v2_pos=3:5813523;1allele=G/A;version=Hapmap2;RS=rs1060556653;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5794037	5794136	.	+	.	Name=Leaf_length;B73v2_pos=3:5844242;1allele=C/T;version=Hapmap2;RS=rs818134354;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5797034	5797133	.	+	.	Name=Leaf_width;B73v2_pos=3:5847237;1allele=G/A;version=Hapmap1;RS=rs131373473;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5799574	5799673	.	+	.	Name=Leaf_width;B73v2_pos=3:5849777;1allele=G/C;version=Hapmap2;RS=rs803293029;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	5799713	5799812	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:5849916;1allele=G/T;version=Hapmap2;RS=rs131373386;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	5823574	5823673	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:5872397;1allele=C/T;version=Hapmap2;RS=rs845282291;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5832922	5833021	.	+	.	Name=Leaf_width;B73v2_pos=3:5881744;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	5834749	5834848	.	+	.	Name=Leaf_width;B73v2_pos=3:5883571;1allele=A/G;version=Hapmap2;RS=rs1062076214;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	5893335	5893434	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:5951291;1allele=A/G;version=Hapmap2;RS=rs129286347;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	5893587	5893686	.	+	.	Name=Stalk_strength;B73v2_pos=3:5951543;1allele=C/G;version=Hapmap2;RS=rs835926838;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	5893827	5893926	.	+	.	Name=Leaf_width;B73v2_pos=3:5951783;1allele=G/C;version=Hapmap2;RS=rs828373090;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	5924020	5924119	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:5982009;1allele=C/A;version=Hapmap2;RS=rs824548687;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	5935234	5935333	.	+	.	Name=Tassel_length;B73v2_pos=3:5993223;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	5938157	5938256	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:5996146;1allele=G/T;version=Hapmap2;RS=rs129566778;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	6052537	6052636	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:6105912;1allele=C/T;version=Hapmap2;RS=rs843306523;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	6057355	6057454	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:6101094;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6058547	6058646	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:6099902;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6058547	6058646	.	+	.	Name=Plant_height;B73v2_pos=3:6099902;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6058827	6058926	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:6099622;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6061554	6061653	.	+	.	Name=Plant_height;B73v2_pos=3:6096895;1allele=A/G;version=Hapmap1;RS=rs850435838;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6103587	6103686	.	+	.	Name=Nitrate;B73v2_pos=3:6159420;1allele=G/A;version=Hapmap2;RS=rs814529960;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	6217784	6217883	.	+	.	Name=Plant_height;B73v2_pos=3:6259822;1allele=C/T;version=Hapmap2;RS=rs129469517;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	6233550	6233649	.	+	.	Name=Plant_height;B73v2_pos=3:6276239;1allele=T/C;version=Hapmap2;RS=rs819315557;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6250717	6250816	.	+	.	Name=Ear_height;B73v2_pos=3:6293406;1allele=T/C;version=Hapmap2;RS=rs129409179;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6254526	6254625	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:6297215;1allele=C/T;version=Hapmap2;RS=rs835627070;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6256231	6256330	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6298920;1allele=C/T;version=Hapmap2;RS=rs822885669;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6259764	6259863	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6302353;1allele=T/G;version=Hapmap2;RS=rs829127917;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	6381972	6382071	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:6428052;1allele=C/A;version=Hapmap1;RS=rs850023911;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	6382074	6382173	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:6428154;1allele=G/A;version=Hapmap2;RS=rs846052724;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	6386643	6386742	.	+	.	Name=Tassel_length;B73v2_pos=3:6432723;1allele=T/G;version=Hapmap1;RS=rs131374694;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	6451445	6451544	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:6496072;1allele=T/C;version=Hapmap2;RS=rs834083567;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	6452856	6452955	.	+	.	Name=Ear_height;B73v2_pos=3:6497483;1allele=T/G;version=Hapmap2;RS=rs129333275;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	6452914	6453013	.	+	.	Name=Days_to_silk;B73v2_pos=3:6497541;1allele=A/C;version=Hapmap2;RS=rs276968635;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	6468925	6469024	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6520792;1allele=A/G;version=Hapmap2;RS=rs131374837;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	6479441	6479540	.	+	.	Name=Sucrose;B73v2_pos=3:6531309;1allele=A/G;version=Hapmap2;RS=rs833456748;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	6479441	6479540	.	+	.	Name=Starch;B73v2_pos=3:6531309;1allele=A/G;version=Hapmap2;RS=rs833456748;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	6523199	6523298	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:6585356;1allele=A/C;version=Hapmap2;RS=rs846026784;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	6570947	6571046	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6649642;1allele=/CCGGA;version=Hapmap1;RS=rs818688720;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	6571651	6571750	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6648938;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6602705	6602804	.	+	.	Name=Nitrate;B73v2_pos=3:6674127;1allele=C/T;version=Hapmap2;RS=rs276968759;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6606167	6606266	.	+	.	Name=Leaf_width;B73v2_pos=3:6677589;1allele=A/G;version=Hapmap2;RS=rs822291835;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	6613034	6613133	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6684456;1allele=AACGCG/;version=Hapmap1;RS=rs825622921;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	6613781	6613880	.	+	.	Name=Leaf_length;B73v2_pos=3:6685203;1allele=/AAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6615352	6615451	.	+	.	Name=Leaf_width;B73v2_pos=3:6686774;1allele=C/T;version=Hapmap1;RS=rs131375006;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6616365	6616464	.	+	.	Name=Height_above_ear;B73v2_pos=3:6687787;1allele=/CCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6616427	6616526	.	+	.	Name=Height_above_ear;B73v2_pos=3:6687849;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6616554	6616653	.	+	.	Name=Height_above_ear;B73v2_pos=3:6687976;1allele=C/G;version=Hapmap2;RS=rs848778319;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	6617007	6617106	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:6688429;1allele=G/C;version=Hapmap1;RS=rs131375079;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	6622131	6622230	.	+	.	Name=Nitrate;B73v2_pos=3:6693554;1allele=A/T;version=Hapmap2;RS=rs820392867;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	6686227	6686326	.	+	.	Name=Stalk_strength;B73v2_pos=3:6750458;1allele=A/T;version=Hapmap2;RS=rs831506976;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	6696930	6697029	.	+	.	Name=Nitrate;B73v2_pos=3:6761161;1allele=A/G;version=Hapmap2;RS=rs838343251;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	6723856	6723955	.	+	.	Name=Nitrate;B73v2_pos=3:6856774;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6746096	6746195	.	+	.	Name=Nitrate;B73v2_pos=3:6845779;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6764588	6764687	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6793976;1allele=C/G;version=Hapmap2;RS=rs844624439;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	6772727	6772826	.	+	.	Name=Nitrate;B73v2_pos=3:6802114;1allele=G/T;version=Hapmap2;RS=rs809579616;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	6795198	6795297	.	+	.	Name=Nitrate;B73v2_pos=3:6863966;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6809781	6809880	.	+	.	Name=Nitrate;B73v2_pos=3:6880011;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6817638	6817737	.	+	.	Name=Nitrate;B73v2_pos=3:6887871;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6853622	6853721	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:6923856;1allele=T/G;version=Hapmap2;RS=rs129580568;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	6854290	6854389	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:6924524;1allele=C/T;version=Hapmap2;RS=rs815792586;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6871196	6871295	.	+	.	Name=Leaf_width;B73v2_pos=3:6941427;1allele=G/C;version=Hapmap2;RS=rs813477578;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	6872695	6872794	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:6942926;1allele=C/T;version=Hapmap2;RS=rs819074762;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	6874992	6875091	.	+	.	Name=Days_to_silk;B73v2_pos=3:6945219;1allele=C/A;version=Hapmap2;RS=rs813152412;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	6875028	6875127	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:6945255;1allele=T/C;version=Hapmap2;RS=rs808698594;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	6877422	6877521	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:6947649;1allele=G/A;version=Hapmap2;RS=rs813189010;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	6877819	6877918	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:6948046;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	6883830	6883929	.	+	.	Name=Tassel_length;B73v2_pos=3:6954061;1allele=G/T;version=Hapmap2;RS=rs821495278;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	6884039	6884138	.	+	.	Name=Days_to_silk;B73v2_pos=3:6954270;1allele=A/G;version=Hapmap2;RS=rs834382666;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	6897294	6897393	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:6968677;1allele=T/C;version=Hapmap1;RS=rs131375868;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	6902269	6902368	.	+	.	Name=Days_to_silk;B73v2_pos=3:6973652;1allele=G/A;version=Hapmap1;RS=rs131375945;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7010702	7010801	.	+	.	Name=Days_to_silk;B73v2_pos=3:7079013;1allele=G/T;version=Hapmap2;RS=rs131376060;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	7014124	7014223	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7082435;1allele=A/T;version=Hapmap2;RS=rs815012592;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	7014124	7014223	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:7082435;1allele=A/T;version=Hapmap2;RS=rs815012592;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	7014247	7014346	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:7082558;1allele=C/G;version=Hapmap2;RS=rs836021953;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	7019004	7019103	.	+	.	Name=Ear_height;B73v2_pos=3:7087315;1allele=C/T;version=Hapmap2;RS=rs845476595;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7052599	7052698	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:7120909;1allele=GACACG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7053137	7053236	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7121447;1allele=T/C;version=Hapmap2;RS=rs131376151;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7055709	7055808	.	+	.	Name=Ear_height;B73v2_pos=3:7124019;1allele=A/C;version=Hapmap2;RS=rs726477699;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	7058297	7058396	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7126607;1allele=G/A;version=Hapmap2;RS=rs827234985;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7063969	7064068	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7132279;1allele=A/G;version=Hapmap2;RS=rs834219344;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	7065781	7065880	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:7134091;1allele=T/C;version=Hapmap2;RS=rs807728037;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7066226	7066325	.	+	.	Name=Plant_height;B73v2_pos=3:7134536;1allele=A/G;version=Hapmap2;RS=rs129526140;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	7066543	7066642	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:7134853;1allele=G/A;version=Hapmap2;RS=rs809979579;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7066560	7066659	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:7134870;1allele=C/T;version=Hapmap2;RS=rs816715308;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	7068199	7068298	.	+	.	Name=Days_to_silk;B73v2_pos=3:7136509;1allele=AA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7068233	7068332	.	+	.	Name=Days_to_silk;B73v2_pos=3:7136543;1allele=C/G;version=Hapmap2;RS=rs803340306;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	7137252	7137351	.	+	.	Name=Stalk_strength;B73v2_pos=3:7200976;1allele=A/G;version=Hapmap2;RS=rs824971486;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	7140369	7140468	.	+	.	Name=Ear_height;B73v2_pos=3:7204093;1allele=G/C;version=Hapmap2;RS=rs129552036;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	7141605	7141704	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7205329;1allele=T/A;version=Hapmap2;RS=rs803088732;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	7150011	7150110	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7213735;1allele=C/T;version=Hapmap1;RS=rs276969182;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	7183512	7183611	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7273981;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7188612	7188711	.	+	.	Name=Tassel_length;B73v2_pos=3:7279081;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7320353	7320452	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7409618;1allele=C/T;version=Hapmap2;RS=rs276969436;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7326813	7326912	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7416078;1allele=G/T;version=Hapmap2;RS=rs129495605;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	7348655	7348754	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7444932;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7400646	7400745	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:7488527;1allele=G/A;version=Hapmap2;RS=rs827724677;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7434328	7434427	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:7521880;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7536270	7536369	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:7608885;1allele=G/A;version=Hapmap2;RS=rs826623145;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7545321	7545420	.	+	.	Name=Ear_height;B73v2_pos=3:7618121;1allele=C/T;version=Hapmap2;RS=rs803542180;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7634379	7634478	.	+	.	Name=Ear_height;B73v2_pos=3:7719808;1allele=C/T;version=Hapmap2;RS=rs844892907;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7661769	7661868	.	+	.	Name=Leaf_length;B73v2_pos=3:7747190;1allele=T/C;version=Hapmap1;RS=rs131376733;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	7662154	7662253	.	+	.	Name=Leaf_length;B73v2_pos=3:7747575;1allele=T/A;version=Hapmap2;RS=rs131376738;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7688245	7688344	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:7772368;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7689716	7689815	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7773839;1allele=A/G;version=Hapmap2;RS=rs814561335;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	7689759	7689858	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7773882;1allele=G/A;version=Hapmap2;RS=rs844858120;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7690337	7690436	.	+	.	Name=Leaf_length;B73v2_pos=3:7774460;1allele=T/C;version=Hapmap2;RS=rs276969884;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	7695175	7695274	.	+	.	Name=Glucose;B73v2_pos=3:7779296;1allele=C/T;version=Hapmap2;RS=rs848398199;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7695332	7695431	.	+	.	Name=Glucose;B73v2_pos=3:7779453;1allele=C/T;version=Hapmap2;RS=rs276969905;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	7714227	7714326	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:7798348;1allele=T/G;version=Hapmap2;RS=rs844375064;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	7723378	7723422	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:7807493;1allele=/TAGTCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7725180	7725279	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:7833530;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7726016	7726115	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:7832693;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7727902	7728001	.	+	.	Name=Plant_height;B73v2_pos=3:7830807;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7727902	7728001	.	+	.	Name=Ear_height;B73v2_pos=3:7830807;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7727902	7728001	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:7830807;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7773196	7773295	.	+	.	Name=Glucose;B73v2_pos=3:7864924;1allele=T/C;version=Hapmap2;RS=rs276969936;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	7773878	7773977	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7865606;1allele=A/T;version=Hapmap2;RS=rs815239574;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	7774042	7774141	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7865770;1allele=A/C;version=Hapmap2;RS=rs129309920;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	7775191	7775290	.	+	.	Name=Days_to_silk;B73v2_pos=3:7866919;1allele=A/G;version=Hapmap2;RS=rs842592659;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	7794424	7794523	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:7886236;1allele=G/A;version=Hapmap2;RS=rs843224802;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7821947	7822046	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:7912789;1allele=G/T;version=Hapmap2;RS=rs827896355;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	7842554	7842653	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7933408;1allele=T/A;version=Hapmap1;RS=rs131376827;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	7843440	7843539	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7934294;1allele=G/C;version=Hapmap2;RS=rs129460331;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	7844653	7844752	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:7935506;1allele=C/G;version=Hapmap2;RS=rs846465441;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	7849761	7849860	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:7940614;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7852751	7852850	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:7943604;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7879971	7880070	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:7966698;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	7887325	7887424	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:7974052;1allele=G/A;version=Hapmap2;RS=rs129373983;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	7896034	7896133	.	+	.	Name=Leaf_width;B73v2_pos=3:7982761;1allele=G/A;version=Hapmap2;RS=rs820484209;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	7920038	7920137	.	+	.	Name=Days_to_silk;B73v2_pos=3:8006763;1allele=C/T;version=Hapmap2;RS=rs131377143;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	7976604	7976703	.	+	.	Name=Days_to_silk;B73v2_pos=3:8063328;1allele=G/A;version=Hapmap2;RS=rs846847171;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	8063078	8063177	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:8121093;1allele=T/G;version=Hapmap2;RS=rs129472981;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	8064808	8064907	.	+	.	Name=Height_above_ear;B73v2_pos=3:8122823;1allele=A/T;version=Hapmap2;RS=rs840734095;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	8065910	8066009	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:8123925;1allele=A/T;version=Hapmap1;RS=rs131377275;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	8066824	8066923	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8124839;1allele=T/G;version=Hapmap1;RS=rs129298422;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	8069993	8070092	.	+	.	Name=Leaf_width;B73v2_pos=3:8128008;1allele=G/A;version=Hapmap2;RS=rs816368032;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	8126285	8126384	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8149543;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8126954	8127053	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8148874;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8127461	8127560	.	+	.	Name=Leaf_length;B73v2_pos=3:8148365;1allele=G/A;version=Hapmap2;RS=rs1062923665;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	8127635	8127734	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8148191;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8127847	8127946	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8147979;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8128280	8128379	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8147545;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8128531	8128630	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8147294;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8128673	8128772	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:8147152;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8138735	8138834	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8195332;1allele=G/A;version=Hapmap2;RS=rs808343045;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	8150905	8151004	.	+	.	Name=Ear_height;B73v2_pos=3:8207504;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8161280	8161379	.	+	.	Name=Leaf_width;B73v2_pos=3:8217883;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8161372	8161471	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:8217975;1allele=A/G;version=Hapmap2;RS=rs827534041;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	8165885	8165984	.	+	.	Name=Glucose;B73v2_pos=3:8222488;1allele=T/G;version=Hapmap2;RS=rs129401312;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	8214134	8214233	.	+	.	Name=Tassel_length;B73v2_pos=3:8270635;1allele=G/T;version=Hapmap1;RS=rs276970752;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	8214677	8214776	.	+	.	Name=Days_to_silk;B73v2_pos=3:8271178;1allele=A/C;version=Hapmap2;RS=rs811198099;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	8214984	8215083	.	+	.	Name=Fructose;B73v2_pos=3:8271485;1allele=A/G;version=Hapmap2;RS=rs807173784;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	8218366	8218465	.	+	.	Name=Stalk_strength;B73v2_pos=3:8274867;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8244163	8244262	.	+	.	Name=Days_to_silk;B73v2_pos=3:8302320;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8497937	8498036	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8541217;1allele=C/T;version=Hapmap1;RS=rs131377771;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	8499007	8499106	.	+	.	Name=Days_to_silk;B73v2_pos=3:8542287;1allele=C/G;version=Hapmap1;RS=rs131377754;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	8500833	8500932	.	+	.	Name=Days_to_silk;B73v2_pos=3:8544113;1allele=T/C;version=Hapmap2;RS=rs837961993;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	8500860	8500959	.	+	.	Name=Days_to_silk;B73v2_pos=3:8544140;1allele=G/A;version=Hapmap2;RS=rs839580816;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	8503100	8503199	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:8546380;1allele=G/C;version=Hapmap2;RS=rs803050518;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	8574326	8574425	.	+	.	Name=Days_to_silk;B73v2_pos=3:8609717;1allele=G/A;version=Hapmap2;RS=rs727216865;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	8591555	8591654	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:8626065;1allele=C/T;version=Hapmap2;RS=rs825913604;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	8759445	8759544	.	+	.	Name=Days_to_silk;B73v2_pos=3:8796141;1allele=C/T;version=Hapmap2;RS=rs817387586;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	8765887	8765986	.	+	.	Name=Days_to_silk;B73v2_pos=3:8802584;1allele=C/T;version=Hapmap2;RS=rs829334253;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	8781544	8781643	.	+	.	Name=Days_to_silk;B73v2_pos=3:8818241;1allele=C/G;version=Hapmap2;RS=rs805783378;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	8787745	8787844	.	+	.	Name=Days_to_silk;B73v2_pos=3:8824442;1allele=G/A;version=Hapmap2;RS=rs829541810;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	8819148	8819247	.	+	.	Name=Stalk_strength;B73v2_pos=3:8886388;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8820981	8821080	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8884555;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8822080	8822179	.	+	.	Name=Days_to_silk;B73v2_pos=3:8883456;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8825907	8826006	.	+	.	Name=Height_above_ear;B73v2_pos=3:8879629;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8832579	8832678	.	+	.	Name=Height_above_ear;B73v2_pos=3:8872958;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8907845	8907943	.	+	.	Name=Stalk_strength;B73v2_pos=3:8988385;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8913414	8913513	.	+	.	Name=Stalk_strength;B73v2_pos=3:8982813;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8915731	8915830	.	+	.	Name=Glucose;B73v2_pos=3:8980496;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8916662	8916761	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:8979565;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8918718	8918817	.	+	.	Name=Glucose;B73v2_pos=3:8977509;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	8975431	8975530	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:9043075;1allele=A/G;version=Hapmap2;RS=rs821451502;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9000947	9001046	.	+	.	Name=Stalk_strength;B73v2_pos=3:9067759;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	9001193	9001292	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:9068005;1allele=A/G;version=Hapmap2;RS=rs818184444;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9002732	9002831	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:9069544;1allele=C/T;version=Hapmap2;RS=rs276971509;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	9003334	9003433	.	+	.	Name=Glucose;B73v2_pos=3:9070146;1allele=C/A;version=Hapmap2;RS=rs276971518;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	9045751	9045850	.	+	.	Name=Days_to_silk;B73v2_pos=3:9111738;1allele=/GG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	9048265	9048364	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:9114252;1allele=T/C;version=Hapmap2;RS=rs813438085;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	9063981	9064080	.	+	.	Name=Leaf_length;B73v2_pos=3:9129968;1allele=G/A;version=Hapmap2;RS=rs848210110;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9164974	9165073	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:9231505;1allele=C/T;version=Hapmap2;RS=rs805210336;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9168940	9169039	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:9235471;1allele=A/G;version=Hapmap2;RS=rs828210139;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9169015	9169114	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:9235546;1allele=C/T;version=Hapmap2;RS=rs804020023;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	9174092	9174191	.	+	.	Name=Days_to_silk;B73v2_pos=3:9240623;1allele=C/T;version=Hapmap2;RS=rs276971707;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9244555	9244654	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:9313711;1allele=G/A;version=Hapmap2;RS=rs725119588;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9254446	9254545	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:9323602;1allele=G/C;version=Hapmap1;RS=rs131378487;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9271777	9271876	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:9378451;1allele=T/C;version=Hapmap2;RS=rs129580379;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9283648	9283747	.	+	.	Name=Glucose;B73v2_pos=3:9390322;1allele=G/A;version=Hapmap2;RS=rs276972053;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9364787	9364886	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:9424173;1allele=G/A;version=Hapmap2;RS=rs821820360;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9441388	9441487	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:9454182;1allele=G/A;version=Hapmap2;RS=rs1062709436;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9441763	9441862	.	+	.	Name=Glucose;B73v2_pos=3:9454557;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	9444108	9444207	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:9456902;1allele=C/T;version=Hapmap2;RS=rs276972239;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9444654	9444753	.	+	.	Name=Days_to_silk;B73v2_pos=3:9457448;1allele=A/G;version=Hapmap2;RS=rs276972249;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9523206	9523305	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:9556619;1allele=G/A;version=Hapmap2;RS=rs276972276;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9674106	9674205	.	+	.	Name=Height_above_ear;B73v2_pos=3:9725325;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	9778812	9778911	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:9805393;1allele=C/T;version=Hapmap2;RS=rs848650033;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9782353	9782452	.	+	.	Name=Glucose;B73v2_pos=3:9808934;1allele=C/T;version=Hapmap2;RS=rs276972480;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	9783832	9783931	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:9810413;1allele=G/C;version=Hapmap2;RS=rs724773640;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	9791979	9792078	.	+	.	Name=Leaf_length;B73v2_pos=3:9818560;1allele=C/T;version=Hapmap2;RS=rs129580093;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9793821	9793920	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:9820403;1allele=C/G;version=Hapmap2;RS=rs847163803;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	9794492	9794591	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:9821074;1allele=C/G;version=Hapmap2;RS=rs129343226;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	9794506	9794605	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:9821088;1allele=G/T;version=Hapmap2;RS=rs816179315;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	9829133	9829232	.	+	.	Name=Tassel_length;B73v2_pos=3:9852532;1allele=G/A;version=Hapmap2;RS=rs837323495;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9830804	9830903	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:9854203;1allele=/TAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	9838372	9838471	.	+	.	Name=Days_to_silk;B73v2_pos=3:9862482;1allele=C/T;version=Hapmap2;RS=rs129320453;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9839214	9839313	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:9863324;1allele=T/C;version=Hapmap1;RS=rs131379018;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	9848061	9848160	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:9872171;1allele=A/G;version=Hapmap2;RS=rs276972628;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9848832	9848931	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:9872942;1allele=G/A;version=Hapmap2;RS=rs276972631;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9858714	9858813	.	+	.	Name=Nitrate;B73v2_pos=3:9882825;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	9865740	9865839	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:9889851;1allele=T/C;version=Hapmap2;RS=rs814555880;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	9867473	9867572	.	+	.	Name=Tassel_length;B73v2_pos=3:9891584;1allele=G/A;version=Hapmap2;RS=rs811663854;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9867490	9867589	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:9891601;1allele=A/C;version=Hapmap2;RS=rs1064775806;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	9883587	9883686	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:9907703;1allele=T/C;version=Hapmap2;RS=rs825594678;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	9902483	9902582	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:9928662;1allele=G/A;version=Hapmap2;RS=rs808097513;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9909395	9909494	.	+	.	Name=Days_to_silk;B73v2_pos=3:9935576;1allele=A/G;version=Hapmap1;RS=rs276972744;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9909559	9909658	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:9935740;1allele=G/T;version=Hapmap2;RS=rs129484721;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	9912844	9912943	.	+	.	Name=Tassel_length;B73v2_pos=3:9939025;1allele=C/T;version=Hapmap2;RS=rs812118623;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	9920019	9920118	.	+	.	Name=Leaf_length;B73v2_pos=3:9946200;1allele=T/A;version=Hapmap2;RS=rs276972809;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	9923050	9923149	.	+	.	Name=Glucose;B73v2_pos=3:9949231;1allele=G/A;version=Hapmap2;RS=rs837409260;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9925839	9925938	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:9952020;1allele=T/A;version=Hapmap2;RS=rs129612787;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	9926141	9926240	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:9952322;1allele=G/C;version=Hapmap2;RS=rs129427083;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	9977940	9978039	.	+	.	Name=Tassel_length;B73v2_pos=3:10004023;1allele=G/A;version=Hapmap2;RS=rs826978818;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9980923	9981022	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10007006;1allele=A/G;version=Hapmap2;RS=rs129461327;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	9981066	9981165	.	+	.	Name=Days_to_silk;B73v2_pos=3:10007149;1allele=C/A;version=Hapmap2;RS=rs815973977;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	9982944	9983043	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10009027;1allele=C/A;version=Hapmap2;RS=rs276972932;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	9984775	9984874	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10010858;1allele=A/C;version=Hapmap1;RS=rs131379160;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	9985073	9985172	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10011156;1allele=C/T;version=Hapmap1;RS=rs131379168;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10042294	10042393	.	+	.	Name=Fructose;B73v2_pos=3:10053432;1allele=G/A;version=Hapmap2;RS=rs276973029;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10043931	10044030	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:10055069;1allele=G/A;version=Hapmap2;RS=rs727047810;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10044941	10045040	.	+	.	Name=Glucose;B73v2_pos=3:10056079;1allele=A/G;version=Hapmap2;RS=rs276973062;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10045337	10045436	.	+	.	Name=Glucose;B73v2_pos=3:10056475;1allele=G/T;version=Hapmap2;RS=rs276973068;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	10053805	10053904	.	+	.	Name=Glucose;B73v2_pos=3:10064944;1allele=G/C;version=Hapmap1;RS=rs834388658;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10054275	10054374	.	+	.	Name=Glucose;B73v2_pos=3:10065414;1allele=C/T;version=Hapmap2;RS=rs276973096;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10056180	10056279	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:10067319;1allele=A/T;version=Hapmap2;RS=rs806421607;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	10063016	10063115	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10074155;1allele=G/C;version=Hapmap1;RS=rs129307808;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10063910	10064009	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10075049;1allele=T/C;version=Hapmap2;RS=rs129417995;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10064011	10064110	.	+	.	Name=Fructose;B73v2_pos=3:10075150;1allele=T/C;version=Hapmap2;RS=rs129572513;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10066702	10066801	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10077840;1allele=G/A;version=Hapmap2;RS=rs840417553;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10067656	10067755	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10078794;1allele=G/A;version=Hapmap2;RS=rs276973164;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10068011	10068110	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10079149;1allele=A/T;version=Hapmap2;RS=rs1063385458;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	10068601	10068700	.	+	.	Name=Ear_height;B73v2_pos=3:10079739;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10111196	10111295	.	+	.	Name=Height_above_ear;B73v2_pos=3:10130407;1allele=A/G;version=Hapmap2;RS=rs806877343;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10115928	10116027	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:10135139;1allele=T/G;version=Hapmap2;RS=rs803767897;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	10116678	10116777	.	+	.	Name=Leaf_width;B73v2_pos=3:10135889;1allele=T/C;version=Hapmap2;RS=rs811652216;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10120668	10120767	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:10139880;1allele=A/C;version=Hapmap2;RS=rs825166884;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	10120890	10120989	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:10140102;1allele=A/G;version=Hapmap2;RS=rs276973216;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10121835	10121934	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:10141047;1allele=A/C;version=Hapmap2;RS=rs724752435;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	10122493	10122592	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10141705;1allele=C/T;version=Hapmap2;RS=rs829251339;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10163730	10163829	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:10174759;1allele=A/G;version=Hapmap2;RS=rs815214074;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10163730	10163829	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:10174759;1allele=A/G;version=Hapmap2;RS=rs815214074;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10163922	10164021	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:10174951;1allele=G/A;version=Hapmap2;RS=rs276973272;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10164873	10164972	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:10175902;1allele=G/A;version=Hapmap2;RS=rs129324633;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10168735	10168834	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:10179767;1allele=C/T;version=Hapmap2;RS=rs276973299;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10168801	10168900	.	+	.	Name=Ear_height;B73v2_pos=3:10179833;1allele=C/T;version=Hapmap2;RS=rs276973302;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10169159	10169258	.	+	.	Name=Ear_height;B73v2_pos=3:10180191;1allele=G/C;version=Hapmap2;RS=rs847961188;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	10169778	10169877	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:10180810;1allele=A/G;version=Hapmap2;RS=rs129333631;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10170044	10170143	.	+	.	Name=Height_above_ear;B73v2_pos=3:10181076;1allele=A/G;version=Hapmap2;RS=rs834614247;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10170708	10170807	.	+	.	Name=Glucose;B73v2_pos=3:10181740;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10211111	10211210	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:10221490;1allele=G/C;version=Hapmap1;RS=rs129410909;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10211111	10211210	.	+	.	Name=Leaf_length;B73v2_pos=3:10221490;1allele=C/G;version=Hapmap2;RS=rs129410909;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10211123	10211222	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:10221502;1allele=C/G;version=Hapmap1;RS=rs129279467;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	10211123	10211222	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10221502;1allele=C/G;version=Hapmap1;RS=rs129279467;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	10211229	10211328	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10221608;1allele=A/G;version=Hapmap1;RS=rs129558900;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10217848	10217947	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:10228227;1allele=T/C;version=Hapmap2;RS=rs129367924;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10219592	10219691	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:10229971;1allele=A/T;version=Hapmap2;RS=rs835519189;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10220395	10220494	.	+	.	Name=Days_to_silk;B73v2_pos=3:10230774;1allele=C/G;version=Hapmap2;RS=rs726071227;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	10220400	10220499	.	+	.	Name=Ear_height;B73v2_pos=3:10230779;1allele=G/A;version=Hapmap2;RS=rs129465295;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10220400	10220499	.	+	.	Name=Plant_height;B73v2_pos=3:10230779;1allele=G/A;version=Hapmap2;RS=rs129465295;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10220548	10220647	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:10230927;1allele=C/T;version=Hapmap2;RS=rs1061502151;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10221241	10221340	.	+	.	Name=Days_to_silk;B73v2_pos=3:10231620;1allele=T/C;version=Hapmap2;RS=rs129299080;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10221697	10221796	.	+	.	Name=Plant_height;B73v2_pos=3:10232076;1allele=A/G;version=Hapmap2;RS=rs276973377;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10221697	10221796	.	+	.	Name=Ear_height;B73v2_pos=3:10232076;1allele=A/G;version=Hapmap2;RS=rs276973377;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10221697	10221796	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:10232076;1allele=A/G;version=Hapmap2;RS=rs276973377;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10224848	10224947	.	+	.	Name=Ear_height;B73v2_pos=3:10235192;1allele=G/A;version=Hapmap2;RS=rs1064364403;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10236037	10236136	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10246380;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10258945	10259044	.	+	.	Name=Days_to_silk;B73v2_pos=3:10269288;1allele=A/G;version=Hapmap2;RS=rs817911232;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10259051	10259150	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:10269394;1allele=C/T;version=Hapmap2;RS=rs1061066707;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10259051	10259150	.	+	.	Name=Plant_height;B73v2_pos=3:10269394;1allele=C/T;version=Hapmap2;RS=rs1061066707;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10259051	10259150	.	+	.	Name=Ear_height;B73v2_pos=3:10269394;1allele=C/T;version=Hapmap2;RS=rs1061066707;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10259064	10259163	.	+	.	Name=Ear_height;B73v2_pos=3:10269407;1allele=T/C;version=Hapmap2;RS=rs1062877593;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10259064	10259163	.	+	.	Name=Plant_height;B73v2_pos=3:10269407;1allele=T/C;version=Hapmap2;RS=rs1062877593;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10263342	10263441	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10273685;1allele=C/T;version=Hapmap1;RS=rs131379512;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10264354	10264453	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10274697;1allele=A/G;version=Hapmap2;RS=rs276973460;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10264762	10264861	.	+	.	Name=Days_to_silk;B73v2_pos=3:10275105;1allele=C/A;version=Hapmap2;RS=rs131379525;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	10265683	10265782	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10276026;1allele=G/C;version=Hapmap2;RS=rs842809474;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10266808	10266907	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:10277151;1allele=A/T;version=Hapmap2;RS=rs807445218;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	10266968	10267067	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:10277311;1allele=C/T;version=Hapmap2;RS=rs812308821;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10267717	10267816	.	+	.	Name=Days_to_silk;B73v2_pos=3:10278060;1allele=G/T;version=Hapmap2;RS=rs819138832;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	10268113	10268212	.	+	.	Name=Days_to_silk;B73v2_pos=3:10278456;1allele=T/C;version=Hapmap2;RS=rs827554809;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10270343	10270442	.	+	.	Name=Days_to_silk;B73v2_pos=3:10280686;1allele=T/C;version=Hapmap1;RS=rs131379536;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10270681	10270780	.	+	.	Name=Ear_height;B73v2_pos=3:10281024;1allele=G/A;version=Hapmap2;RS=rs276973493;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10270681	10270780	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10281024;1allele=G/A;version=Hapmap2;RS=rs276973493;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10273615	10273714	.	+	.	Name=Ear_height;B73v2_pos=3:10283958;1allele=G/C;version=Hapmap1;RS=rs129340328;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10274766	10274865	.	+	.	Name=Tassel_length;B73v2_pos=3:10285109;1allele=C/A;version=Hapmap1;RS=rs131379588;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10274766	10274865	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:10285109;1allele=C/A;version=Hapmap1;RS=rs131379588;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10279771	10279870	.	+	.	Name=Tassel_length;B73v2_pos=3:10290114;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10314715	10314814	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10325271;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10354355	10354454	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10365331;1allele=C/T;version=Hapmap2;RS=rs129299854;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10355522	10355621	.	+	.	Name=Tassel_length;B73v2_pos=3:10366493;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10356016	10356115	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:10366987;1allele=T/A;version=Hapmap2;RS=rs129343774;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	10376762	10376861	.	+	.	Name=Plant_height;B73v2_pos=3:10387724;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10377093	10377192	.	+	.	Name=Plant_height;B73v2_pos=3:10388055;1allele=A/T;version=Hapmap2;RS=rs131379670;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	10377513	10377612	.	+	.	Name=Tassel_length;B73v2_pos=3:10388475;1allele=T/A;version=Hapmap2;RS=rs831790260;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	10389579	10389678	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10400541;1allele=C/T;version=Hapmap2;RS=rs815304826;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10398965	10399064	.	+	.	Name=Nitrate;B73v2_pos=3:10409929;1allele=G/A;version=Hapmap2;RS=rs845319803;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10401732	10401831	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10412696;1allele=C/T;version=Hapmap2;RS=rs1063384443;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10403098	10403197	.	+	.	Name=Fructose;B73v2_pos=3:10414062;1allele=C/G;version=Hapmap2;RS=rs129415499;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	10425016	10425115	.	+	.	Name=Ear_height;B73v2_pos=3:10436069;1allele=T/G;version=Hapmap2;RS=rs129491187;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	10425191	10425290	.	+	.	Name=Ear_height;B73v2_pos=3:10436244;1allele=C/T;version=Hapmap2;RS=rs276973644;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10425413	10425512	.	+	.	Name=Ear_height;B73v2_pos=3:10436466;1allele=A/G;version=Hapmap2;RS=rs1063873297;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10426603	10426702	.	+	.	Name=Ear_height;B73v2_pos=3:10437656;1allele=A/G;version=Hapmap2;RS=rs844779860;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10427023	10427122	.	+	.	Name=Ear_height;B73v2_pos=3:10438076;1allele=G/C;version=Hapmap2;RS=rs129401958;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10427151	10427250	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:10438204;1allele=T/C;version=Hapmap2;RS=rs807962735;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10427519	10427618	.	+	.	Name=Ear_height;B73v2_pos=3:10438572;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10428345	10428444	.	+	.	Name=Plant_height;B73v2_pos=3:10439398;1allele=A/G;version=Hapmap2;RS=rs276973657;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10428345	10428444	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:10439398;1allele=A/G;version=Hapmap2;RS=rs276973657;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10428350	10428449	.	+	.	Name=Ear_height;B73v2_pos=3:10439403;1allele=A/G;version=Hapmap2;RS=rs726030600;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10428747	10428846	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10439800;1allele=T/C;version=Hapmap2;RS=rs129394916;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10430858	10430957	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:10441911;1allele=C/T;version=Hapmap2;RS=rs1063946920;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10432892	10432991	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10443936;1allele=G/A;version=Hapmap2;RS=rs812861806;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10433295	10433394	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10444339;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10443612	10443711	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10454646;1allele=C/A;version=Hapmap2;RS=rs276973716;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	10453100	10453199	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:10459535;1allele=C/T;version=Hapmap2;RS=rs724499357;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10456912	10457011	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10463347;1allele=G/C;version=Hapmap1;RS=rs131379944;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10456928	10457027	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10463363;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10457852	10457951	.	+	.	Name=Stalk_strength;B73v2_pos=3:10464286;1allele=G/A;version=Hapmap2;RS=rs848967960;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10460274	10460373	.	+	.	Name=Fructose;B73v2_pos=3:10466708;1allele=C/G;version=Hapmap2;RS=rs846438115;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10460276	10460375	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:10466710;1allele=A/G;version=Hapmap2;RS=rs803335481;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10460474	10460573	.	+	.	Name=Plant_height;B73v2_pos=3:10466908;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10461233	10461332	.	+	.	Name=Glucose;B73v2_pos=3:10467667;1allele=T/C;version=Hapmap2;RS=rs1061370938;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10461438	10461537	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10467872;1allele=A/C;version=Hapmap2;RS=rs844074102;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	10463176	10463275	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10469610;1allele=T/C;version=Hapmap2;RS=rs131379862;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10463991	10464090	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10470425;1allele=GGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10471504	10471603	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10477938;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10472774	10472873	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10479208;1allele=C/T;version=Hapmap1;RS=rs276973788;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10472841	10472940	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10479275;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10476696	10476795	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:10483130;1allele=G/A;version=Hapmap2;RS=rs848434299;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	10477456	10477555	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:10483890;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10477456	10477555	.	+	.	Name=Ear_height;B73v2_pos=3:10483890;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10507313	10507412	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:10513686;1allele=G/A;version=Hapmap2;RS=rs129308965;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10512518	10512617	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:10518891;1allele=C/T;version=Hapmap2;RS=rs129403344;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	10513535	10513634	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:10519908;1allele=C/G;version=Hapmap1;RS=rs827677465;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	10513805	10513904	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:10520178;1allele=G/A;version=Hapmap2;RS=rs810930326;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	10515076	10515175	.	+	.	Name=Starch;B73v2_pos=3:10521449;1allele=C/T;version=Hapmap1;RS=rs131380133;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10517718	10517817	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:10524090;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10522930	10523029	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:10529302;1allele=C/G;version=Hapmap2;RS=rs131380166;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	10547233	10547332	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:10555337;1allele=A/G;version=Hapmap2;RS=rs809457247;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10554657	10554756	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:10562761;1allele=G/T;version=Hapmap2;RS=rs820078826;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	10577395	10577494	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:10611958;1allele=T/C;version=Hapmap2;RS=rs842489651;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	10577810	10577909	.	+	.	Name=Ear_height;B73v2_pos=3:10612373;1allele=G/C;version=Hapmap2;RS=rs815374372;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10673623	10673722	.	+	.	Name=Leaf_width;B73v2_pos=3:10676211;1allele=A/G;version=Hapmap2;RS=rs129540678;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	10683571	10683670	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:10686161;1allele=T/G;version=Hapmap2;RS=rs131185346;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	10835043	10835142	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10847279;1allele=A/C;version=Hapmap2;RS=rs827282437;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	10869118	10869217	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10880146;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10869583	10869682	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:10880611;1allele=T/A;version=Hapmap2;RS=rs848249486;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	10869606	10869705	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:10880634;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10953757	10953856	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:10939373;1allele=A/G;version=Hapmap1;RS=rs827266541;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	10954826	10954925	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:10938304;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10955608	10955707	.	+	.	Name=Starch;B73v2_pos=3:10937522;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10955969	10956068	.	+	.	Name=Starch;B73v2_pos=3:10937161;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10957803	10957902	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:10935327;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10959382	10959481	.	+	.	Name=Starch;B73v2_pos=3:10933748;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10959676	10959775	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:10933454;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10989249	10989348	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11053580;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	10994200	10994299	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:11048628;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11006348	11006447	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11036479;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11010379	11010478	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11032448;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11010540	11010639	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11032287;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11010540	11010639	.	+	.	Name=Starch;B73v2_pos=3:11032287;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11030189	11030288	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:11012637;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11030189	11030288	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:11012637;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11055393	11055492	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:11058629;1allele=C/G;version=Hapmap1;RS=rs129434896;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11126988	11127087	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:11128534;1allele=T/G;version=Hapmap2;RS=rs838640042;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	11234615	11234714	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:11234197;1allele=G/A;version=Hapmap2;RS=rs726083335;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	11402831	11402930	.	+	.	Name=Ear_height;B73v2_pos=3:11375031;1allele=A/T;version=Hapmap2;RS=rs843850471;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	11404137	11404236	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:11376341;1allele=G/A;version=Hapmap2;RS=rs819031826;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	11427183	11427282	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:11399385;1allele=T/C;version=Hapmap2;RS=rs821865388;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11427372	11427471	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:11399574;1allele=T/C;version=Hapmap2;RS=rs129536001;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11430219	11430318	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:11402421;1allele=C/T;version=Hapmap2;RS=rs811497443;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11447620	11447719	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:11446233;1allele=A/G;version=Hapmap1;RS=rs725146514;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	11448839	11448938	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11447452;1allele=C/T;version=Hapmap2;RS=rs809935009;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	11448926	11449025	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:11447539;1allele=G/A;version=Hapmap2;RS=rs129314946;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	11464911	11465010	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:11460892;1allele=A/C;version=Hapmap2;RS=rs816239367;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	11467524	11467623	.	+	.	Name=Ear_height;B73v2_pos=3:11463506;1allele=T/C;version=Hapmap2;RS=rs819195415;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	11536633	11536732	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:11531196;1allele=A/C;version=Hapmap2;RS=rs845228195;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	11604729	11604828	.	+	.	Name=Ear_height;B73v2_pos=3:11629327;1allele=G/A;version=Hapmap2;RS=rs819586105;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	11606740	11606839	.	+	.	Name=Starch;B73v2_pos=3:11631338;1allele=G/C;version=Hapmap2;RS=rs131381158;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	11606852	11606951	.	+	.	Name=Sucrose;B73v2_pos=3:11631450;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11608244	11608343	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:11632842;1allele=T/G;version=Hapmap2;RS=rs804319133;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	11608478	11608577	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11633076;1allele=C/A;version=Hapmap2;RS=rs129483805;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	11610723	11610822	.	+	.	Name=Starch;B73v2_pos=3:11635321;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11610932	11611031	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:11635530;1allele=C/G;version=Hapmap1;RS=rs129297186;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11610984	11611083	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:11635582;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11612428	11612527	.	+	.	Name=Starch;B73v2_pos=3:11637026;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11615618	11615717	.	+	.	Name=Starch;B73v2_pos=3:11640217;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11616192	11616291	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:11640791;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11616437	11616536	.	+	.	Name=Starch;B73v2_pos=3:11641036;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11625321	11625420	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:11649920;1allele=C/T;version=Hapmap2;RS=rs129482498;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11628682	11628781	.	+	.	Name=Glucose;B73v2_pos=3:11653281;1allele=C/A;version=Hapmap2;RS=rs821997333;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	11628703	11628802	.	+	.	Name=Glucose;B73v2_pos=3:11653302;1allele=A/C;version=Hapmap2;RS=rs276975095;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	11629279	11629378	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:11653878;1allele=G/T;version=Hapmap2;RS=rs129496713;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	11630884	11630983	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:11655483;1allele=C/T;version=Hapmap2;RS=rs276975132;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11631820	11631919	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:11656419;1allele=C/T;version=Hapmap2;RS=rs840029440;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11695838	11695937	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:11727460;1allele=A/G;version=Hapmap2;RS=rs809384356;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	11695838	11695937	.	+	.	Name=Height_above_ear;B73v2_pos=3:11727460;1allele=A/G;version=Hapmap2;RS=rs809384356;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	11696384	11696483	.	+	.	Name=Days_to_silk;B73v2_pos=3:11728006;1allele=G/A;version=Hapmap2;RS=rs802254502;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	11696384	11696483	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:11728006;1allele=G/A;version=Hapmap2;RS=rs802254502;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	11767819	11767918	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:11789662;1allele=A/G;version=Hapmap2;RS=rs808756434;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	11831234	11831333	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:11854820;1allele=T/G;version=Hapmap2;RS=rs845758655;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	11870024	11870123	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11893577;1allele=T/C;version=Hapmap2;RS=rs129284315;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	11878951	11879050	.	+	.	Name=Glucose;B73v2_pos=3:11902504;1allele=T/A;version=Hapmap2;RS=rs839127589;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	11972786	11972885	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:11990411;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	11972967	11973066	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:11990592;1allele=T/C;version=Hapmap2;RS=rs276975537;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	11973792	11973891	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:11991417;1allele=C/G;version=Hapmap2;RS=rs829138227;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	12007751	12007850	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:12022991;1allele=A/G;version=Hapmap2;RS=rs808240878;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	12038163	12038262	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:12053402;1allele=C/T;version=Hapmap2;RS=rs837121116;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	12048055	12048154	.	+	.	Name=Glucose;B73v2_pos=3:12063295;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12118520	12118619	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:12134903;1allele=G/A;version=Hapmap2;RS=rs131381404;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	12119111	12119210	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:12135494;1allele=C/G;version=Hapmap1;RS=rs131381430;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	12146954	12147053	.	+	.	Name=Leaf_width;B73v2_pos=3:12163272;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12172890	12172989	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:12189211;1allele=T/G;version=Hapmap1;RS=rs129287646;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	12173200	12173299	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:12189521;1allele=G/A;version=Hapmap1;RS=rs129520416;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	12173212	12173311	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:12189533;1allele=A/G;version=Hapmap1;RS=rs129303258;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	12176417	12176516	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:12192738;1allele=G/A;version=Hapmap2;RS=rs276975797;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	12188889	12188988	.	+	.	Name=Ear_height;B73v2_pos=3:12205210;1allele=T/A;version=Hapmap2;RS=rs826625773;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	12243103	12243202	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:12284554;1allele=G/A;version=Hapmap2;RS=rs276975824;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	12246555	12246654	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:12288006;1allele=C/T;version=Hapmap2;RS=rs129274350;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	12251345	12251444	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:12292796;1allele=/TGGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12288256	12288355	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:12341418;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12292932	12293031	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:12346094;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12302357	12302456	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:12355519;1allele=C/A;version=Hapmap2;RS=rs129557318;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	12359233	12359332	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:12412964;1allele=G/A;version=Hapmap2;RS=rs129300376;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	12359233	12359332	.	+	.	Name=Starch;B73v2_pos=3:12412964;1allele=G/A;version=Hapmap2;RS=rs129300376;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	12371200	12371299	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:12423996;1allele=A/G;version=Hapmap2;RS=rs129608086;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	12371208	12371307	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:12424004;1allele=A/G;version=Hapmap2;RS=rs129510121;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	12467109	12467208	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:215686264;1allele=T/A;version=Hapmap2;RS=rs832868757;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	12467302	12467401	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:215686071;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12481551	12481650	.	+	.	Name=Tassel_length;B73v2_pos=3:12528949;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12561081	12561180	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:12605907;1allele=T/C;version=Hapmap2;RS=rs129529132;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	12594395	12594494	.	+	.	Name=Starch;B73v2_pos=3:12645560;1allele=G/A;version=Hapmap2;RS=rs129371148;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	12786678	12786777	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:12837882;1allele=T/C;version=Hapmap2;RS=rs813851102;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	12877396	12877495	.	+	.	Name=Ear_row_number;B73v2_pos=3:12928647;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12953178	12953277	.	+	.	Name=Leaf_length;B73v2_pos=3:12990916;1allele=T/C;version=Hapmap2;RS=rs841830379;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	12953275	12953374	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:12991013;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	12954317	12954416	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:12992055;1allele=-/+;version=Hapmap2;RS=rs848888876;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	13010015	13010114	.	+	.	Name=Leaf_length;B73v2_pos=3:13060183;1allele=T/C;version=Hapmap1;RS=rs131382513;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	13018510	13018609	.	+	.	Name=Leaf_length;B73v2_pos=3:13068678;1allele=C/T;version=Hapmap2;RS=rs276976508;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	13021182	13021281	.	+	.	Name=Total_amino_acids;B73v2_pos=3:13071350;1allele=A/G;version=Hapmap2;RS=rs804339365;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	13061098	13061197	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:13111534;1allele=T/A;version=Hapmap2;RS=rs834849780;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	13132965	13133064	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:13183499;1allele=A/T;version=Hapmap2;RS=rs803230383;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	13203002	13203101	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:13245995;1allele=T/C;version=Hapmap2;RS=rs814825273;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	13227223	13227322	.	+	.	Name=Total_amino_acids;B73v2_pos=3:13270218;1allele=C/T;version=Hapmap2;RS=rs817330300;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	13381415	13381514	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:13423373;1allele=C/T;version=Hapmap2;RS=rs828895440;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	13476390	13476489	.	+	.	Name=Starch;B73v2_pos=3:13510670;1allele=G/A;version=Hapmap2;RS=rs802476476;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	13489492	13489591	.	+	.	Name=Plant_height;B73v2_pos=3:13522487;1allele=T/C;version=Hapmap2;RS=rs807924234;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	13490099	13490198	.	+	.	Name=Starch;B73v2_pos=3:13523094;1allele=A/G;version=Hapmap2;RS=rs276977274;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	13494419	13494518	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:13527414;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	13498850	13498949	.	+	.	Name=Starch;B73v2_pos=3:13531845;1allele=C/G;version=Hapmap2;RS=rs809303631;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	13499011	13499110	.	+	.	Name=Starch;B73v2_pos=3:13532006;1allele=C/T;version=Hapmap2;RS=rs276977301;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	13499037	13499136	.	+	.	Name=Starch;B73v2_pos=3:13532032;1allele=C/T;version=Hapmap2;RS=rs833934404;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	13499097	13499196	.	+	.	Name=Sucrose;B73v2_pos=3:13532092;1allele=T/G;version=Hapmap2;RS=rs806641775;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	13499102	13499201	.	+	.	Name=Sucrose;B73v2_pos=3:13532097;1allele=C/G;version=Hapmap2;RS=rs276977302;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	13499208	13499307	.	+	.	Name=Starch;B73v2_pos=3:13532203;1allele=A/C;version=Hapmap2;RS=rs276977304;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	13544727	13544826	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:13565131;1allele=T/C;version=Hapmap2;RS=rs829421543;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	13569749	13569848	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:13590156;1allele=C/-;version=Hapmap1;RS=rs131383121;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	13648616	13648715	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:13684383;1allele=C/A;version=Hapmap2;RS=rs807010576;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	13732315	13732414	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:13763905;1allele=C/T;version=Hapmap2;RS=rs131383154;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	13850996	13851095	.	+	.	Name=Starch;B73v2_pos=3:13873844;1allele=C/G;version=Hapmap2;RS=rs824774784;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	14021817	14021916	.	+	.	Name=Starch;B73v2_pos=3:14050785;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	14171972	14172071	.	+	.	Name=Height_above_ear;B73v2_pos=3:14173862;1allele=C/T;version=Hapmap2;RS=rs841131361;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	14377135	14377234	.	+	.	Name=Leaf_length;B73v2_pos=3:14409997;1allele=T/C;version=Hapmap1;RS=rs131383791;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	14613282	14613381	.	+	.	Name=Starch;B73v2_pos=3:14659998;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	14646620	14646719	.	+	.	Name=Leaf_width;B73v2_pos=3:14693338;1allele=C/T;version=Hapmap2;RS=rs1063507259;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	14762679	14762778	.	+	.	Name=Leaf_length;B73v2_pos=3:14809297;1allele=G/T;version=Hapmap2;RS=rs129323275;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	14903725	14903824	.	+	.	Name=Tassel_length;B73v2_pos=3:14939727;1allele=C/T;version=Hapmap2;RS=rs831865871;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	14997405	14997504	.	+	.	Name=Leaf_width;B73v2_pos=3:15042919;1allele=A/T;version=Hapmap2;RS=rs276979045;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	14999296	14999395	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:15044810;1allele=T/G;version=Hapmap2;RS=rs276979079;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	15001046	15001145	.	+	.	Name=Leaf_length;B73v2_pos=3:15046560;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	15011228	15011327	.	+	.	Name=Ear_row_number;B73v2_pos=3:15057204;1allele=T/C;version=Hapmap2;RS=rs827704141;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	15011355	15011454	.	+	.	Name=Ear_row_number;B73v2_pos=3:15057331;1allele=A/G;version=Hapmap2;RS=rs131384251;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	15187083	15187182	.	+	.	Name=Nitrate;B73v2_pos=3:15212801;1allele=T/G;version=Hapmap2;RS=rs837798732;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	15204639	15204738	.	+	.	Name=Leaf_width;B73v2_pos=3:15230358;1allele=C/G;version=Hapmap2;RS=rs129428660;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	15271369	15271468	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:15295601;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	15407849	15407948	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:15420915;1allele=G/A;version=Hapmap2;RS=rs840889951;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	15415035	15415134	.	+	.	Name=Height_above_ear;B73v2_pos=3:15428101;1allele=T/C;version=Hapmap2;RS=rs276979518;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	15424710	15424809	.	+	.	Name=Leaf_width;B73v2_pos=3:15437776;1allele=G/T;version=Hapmap2;RS=rs129407407;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	15510030	15510129	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:15519752;1allele=C/T;version=Hapmap2;RS=rs844901910;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	15562561	15562660	.	+	.	Name=Stalk_strength;B73v2_pos=3:15602983;1allele=C/A;version=Hapmap2;RS=rs828570571;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	15677415	15677514	.	+	.	Name=Tassel_length;B73v2_pos=3:15698456;1allele=G/A;version=Hapmap2;RS=rs831452065;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	15694713	15694812	.	+	.	Name=Leaf_length;B73v2_pos=3:15715754;1allele=G/T;version=Hapmap2;RS=rs843308116;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	15845234	15845333	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:15867010;1allele=T/C;version=Hapmap2;RS=rs821520502;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	15845235	15845334	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:15867011;1allele=G/A;version=Hapmap2;RS=rs827950421;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	15905039	15905138	.	+	.	Name=Leaf_length;B73v2_pos=3:15913955;1allele=A/G;version=Hapmap2;RS=rs850221248;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	15905040	15905139	.	+	.	Name=Leaf_length;B73v2_pos=3:15913956;1allele=T/A;version=Hapmap2;RS=rs806324909;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	15969081	15969180	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:15978323;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	15991278	15991377	.	+	.	Name=Leaf_length;B73v2_pos=3:16000561;1allele=T/C;version=Hapmap2;RS=rs831145945;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	15995120	15995219	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:16004403;1allele=G/A;version=Hapmap2;RS=rs824594639;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	15997019	15997118	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16006302;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	16017147	16017246	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:16026431;1allele=G/A;version=Hapmap2;RS=rs129601600;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	16018978	16019077	.	+	.	Name=Tassel_length;B73v2_pos=3:16028262;1allele=A/G;version=Hapmap2;RS=rs811810532;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	16098701	16098800	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16092701;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	16258247	16258345	.	+	.	Name=Starch;B73v2_pos=3:16253043;1allele=A/G;version=Hapmap2;RS=rs1061235286;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	16267714	16267813	.	+	.	Name=Leaf_width;B73v2_pos=3:16262216;1allele=A/C;version=Hapmap2;RS=rs1061225580;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	16277251	16277350	.	+	.	Name=Starch;B73v2_pos=3:16271753;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	16337780	16337879	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16329604;1allele=C/T;version=Hapmap2;RS=rs129524608;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	16352667	16352766	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:16344232;1allele=T/C;version=Hapmap2;RS=rs129486808;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	16507684	16507783	.	+	.	Name=Starch;B73v2_pos=3:16488752;1allele=G/A;version=Hapmap2;RS=rs824207932;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	16510204	16510303	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16491272;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	16593754	16593853	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16574125;1allele=T/C;version=Hapmap2;RS=rs276980897;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	16593901	16594000	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16574272;1allele=C/G;version=Hapmap2;RS=rs276980900;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	16594090	16594189	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16574461;1allele=T/G;version=Hapmap2;RS=rs276980906;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	16595471	16595570	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:16575842;1allele=C/G;version=Hapmap2;RS=rs808077258;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	16599051	16599150	.	+	.	Name=Starch;B73v2_pos=3:16579422;1allele=C/G;version=Hapmap2;RS=rs802622113;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	16634338	16634437	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:16615630;1allele=C/A;version=Hapmap2;RS=rs131385355;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	16635538	16635637	.	+	.	Name=Leaf_width;B73v2_pos=3:16616830;1allele=G/A;version=Hapmap1;RS=rs131385360;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	16878654	16878753	.	+	.	Name=Stalk_strength;B73v2_pos=3:16858730;1allele=G/A;version=Hapmap2;RS=rs838618740;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	16886646	16886745	.	+	.	Name=Stalk_strength;B73v2_pos=3:16866724;1allele=T/C;version=Hapmap2;RS=rs802863880;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	16895405	16895504	.	+	.	Name=Stalk_strength;B73v2_pos=3:16875437;1allele=G/A;version=Hapmap2;RS=rs849076056;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	16903664	16903763	.	+	.	Name=Stalk_strength;B73v2_pos=3:16883697;1allele=C/T;version=Hapmap2;RS=rs823373865;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	16905592	16905691	.	+	.	Name=Stalk_strength;B73v2_pos=3:16885626;1allele=G/A;version=Hapmap2;RS=rs131385551;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	16905749	16905848	.	+	.	Name=Stalk_strength;B73v2_pos=3:16885783;1allele=C/T;version=Hapmap2;RS=rs834037691;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	16999293	16999392	.	+	.	Name=Stalk_strength;B73v2_pos=3:16982884;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	17043330	17043429	.	+	.	Name=Starch;B73v2_pos=3:17023141;1allele=C/T;version=Hapmap2;RS=rs810646087;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	17044461	17044560	.	+	.	Name=Stalk_strength;B73v2_pos=3:17024272;1allele=T/C;version=Hapmap2;RS=rs803772534;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	17052579	17052678	.	+	.	Name=Stalk_strength;B73v2_pos=3:17064224;1allele=C/T;version=Hapmap2;RS=rs842470231;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17060562	17060661	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:17060012;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	17092575	17092674	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:17067500;1allele=A/G;version=Hapmap2;RS=rs818849350;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17136251	17136350	.	+	.	Name=Sucrose;B73v2_pos=3:17111177;1allele=G/A;version=Hapmap2;RS=rs819096018;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17136727	17136826	.	+	.	Name=Sucrose;B73v2_pos=3:17111653;1allele=G/A;version=Hapmap2;RS=rs131385739;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17141024	17141123	.	+	.	Name=Sucrose;B73v2_pos=3:17115950;1allele=G/A;version=Hapmap2;RS=rs131385740;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17207799	17207898	.	+	.	Name=Starch;B73v2_pos=3:17182562;1allele=T/C;version=Hapmap1;RS=rs131385871;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	17463299	17463398	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:17433446;1allele=G/A;version=Hapmap1;RS=rs131386072;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	17587963	17588062	.	+	.	Name=Stalk_strength;B73v2_pos=3:17560318;1allele=T/G;version=Hapmap2;RS=rs826002434;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	17600858	17600957	.	+	.	Name=Total_amino_acids;B73v2_pos=3:17573215;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	17600869	17600968	.	+	.	Name=Total_amino_acids;B73v2_pos=3:17573226;1allele=C/T;version=Hapmap2;RS=rs816056157;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	17608058	17608157	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:17580416;1allele=G/A;version=Hapmap2;RS=rs276982431;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17612304	17612403	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:17584662;1allele=C/T;version=Hapmap1;RS=rs819818818;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17612374	17612473	.	+	.	Name=Ear_height;B73v2_pos=3:17584732;1allele=A/C;version=Hapmap2;RS=rs805254304;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	17615006	17615105	.	+	.	Name=Ear_height;B73v2_pos=3:17587364;1allele=T/C;version=Hapmap2;RS=rs842687992;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	17616793	17616892	.	+	.	Name=Ear_height;B73v2_pos=3:17589151;1allele=A/C;version=Hapmap2;RS=rs820063504;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	17627301	17627400	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:17604752;1allele=T/C;version=Hapmap2;RS=rs1061841528;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	17627450	17627549	.	+	.	Name=Plant_height;B73v2_pos=3:17604901;1allele=C/A;version=Hapmap2;RS=rs820988487;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	17627555	17627654	.	+	.	Name=Plant_height;B73v2_pos=3:17605006;1allele=G/A;version=Hapmap2;RS=rs848728350;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	17628340	17628439	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:17605791;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	17628651	17628750	.	+	.	Name=Starch;B73v2_pos=3:17606102;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	17629859	17629958	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:17607310;1allele=T/G;version=Hapmap2;RS=rs129512530;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	17647518	17647617	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:17637992;1allele=T/C;version=Hapmap1;RS=rs131386272;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	17742550	17742649	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:17747773;1allele=A/G;version=Hapmap2;RS=rs1061614624;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17761947	17762046	.	+	.	Name=Glucose;B73v2_pos=3:17767960;1allele=A/G;version=Hapmap2;RS=rs810781608;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17823717	17823816	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:17822863;1allele=A/G;version=Hapmap2;RS=rs1064556956;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	17829207	17829306	.	+	.	Name=Starch;B73v2_pos=3:17828353;1allele=C/T;version=Hapmap2;RS=rs1064542159;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	17830450	17830549	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:17829594;1allele=/CAA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	17831969	17832068	.	+	.	Name=Tassel_length;B73v2_pos=3:17831113;1allele=G/T;version=Hapmap1;RS=rs131386356;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	18021157	18021256	.	+	.	Name=Leaf_width;B73v2_pos=3:18004468;1allele=C/T;version=Hapmap2;RS=rs129455939;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	18040151	18040250	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:18023330;1allele=C/T;version=Hapmap2;RS=rs820192476;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	18080926	18081025	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:18063714;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	18199326	18199425	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:18185110;1allele=A/C;version=Hapmap1;RS=rs131386716;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	18256452	18256551	.	+	.	Name=Tassel_length;B73v2_pos=3:18233349;1allele=T/G;version=Hapmap2;RS=rs818495525;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	18302118	18302217	.	+	.	Name=Tassel_length;B73v2_pos=3:18279278;1allele=T/A;version=Hapmap2;RS=rs820343513;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	18306628	18306727	.	+	.	Name=Tassel_length;B73v2_pos=3:18283788;1allele=C/T;version=Hapmap2;RS=rs129466990;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	18306629	18306728	.	+	.	Name=Tassel_length;B73v2_pos=3:18283789;1allele=T/C;version=Hapmap2;RS=rs276983065;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	18357458	18357557	.	+	.	Name=Tassel_length;B73v2_pos=3:18333288;1allele=G/C;version=Hapmap2;RS=rs129546897;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	18456967	18457066	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:18430748;1allele=G/A;version=Hapmap2;RS=rs1062538488;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	18463682	18463781	.	+	.	Name=Tassel_length;B73v2_pos=3:18437329;1allele=C/T;version=Hapmap2;RS=rs817895342;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	18466444	18466543	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:18440091;1allele=T/C;version=Hapmap2;RS=rs836780000;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	18513081	18513180	.	+	.	Name=Tassel_length;B73v2_pos=3:18502049;1allele=C/T;version=Hapmap2;RS=rs838606971;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	18594365	18594464	.	+	.	Name=Tassel_length;B73v2_pos=3:18578194;1allele=G/A;version=Hapmap2;RS=rs830629488;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	18631943	18632042	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:18621375;1allele=G/A;version=Hapmap2;RS=rs129488890;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	18777180	18777279	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:18760909;1allele=C/A;version=Hapmap2;RS=rs829878692;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	18838127	18838226	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:18822049;1allele=A/G;version=Hapmap2;RS=rs831364002;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	19001763	19001862	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:18974580;1allele=A/G;version=Hapmap2;RS=rs845992302;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	19278718	19278817	.	+	.	Name=Stalk_strength;B73v2_pos=3:19246345;1allele=G/C;version=Hapmap2;RS=rs839214316;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	19279967	19280066	.	+	.	Name=Stalk_strength;B73v2_pos=3:19247594;1allele=G/A;version=Hapmap2;RS=rs833323398;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19284960	19285059	.	+	.	Name=Sucrose;B73v2_pos=3:19252587;1allele=C/A;version=Hapmap2;RS=rs276984234;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19285592	19285691	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:19253219;1allele=T/C;version=Hapmap2;RS=rs129477595;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19293382	19293481	.	+	.	Name=Tassel_length;B73v2_pos=3:19261009;1allele=C/G;version=Hapmap2;RS=rs814233265;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	19317881	19317980	.	+	.	Name=Ear_height;B73v2_pos=3:19285658;1allele=G/A;version=Hapmap2;RS=rs129567183;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19319100	19319199	.	+	.	Name=Stalk_strength;B73v2_pos=3:19286880;1allele=T/C;version=Hapmap2;RS=rs844439380;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19445965	19446064	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19415095;1allele=C/T;version=Hapmap2;RS=rs829082014;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19447888	19447987	.	+	.	Name=Starch;B73v2_pos=3:19417018;1allele=G/A;version=Hapmap2;RS=rs724815325;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19449791	19449890	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19418921;1allele=T/A;version=Hapmap2;RS=rs822224773;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	19493180	19493279	.	+	.	Name=Stalk_strength;B73v2_pos=3:19463193;1allele=G/C;version=Hapmap2;RS=rs822052610;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	19501867	19501966	.	+	.	Name=Sucrose;B73v2_pos=3:19471880;1allele=G/A;version=Hapmap2;RS=rs819960032;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19515969	19516068	.	+	.	Name=Stalk_strength;B73v2_pos=3:19492642;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19547858	19547957	.	+	.	Name=Tassel_length;B73v2_pos=3:19484264;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19551729	19551828	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19556805;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19554356	19554455	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19554178;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19555487	19555586	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19553047;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19555945	19556044	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19552589;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19574194	19574293	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19531582;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19686982	19687081	.	+	.	Name=Total_amino_acids;B73v2_pos=3:19652565;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19692504	19692603	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19658092;1allele=T/G;version=Hapmap2;RS=rs129277398;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	19692504	19692603	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19658092;1allele=T/G;version=Hapmap2;RS=rs129277398;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	19700287	19700386	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:19665875;1allele=C/T;version=Hapmap2;RS=rs834413646;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19702127	19702226	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19667715;1allele=T/C;version=Hapmap2;RS=rs826523419;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19735572	19735671	.	+	.	Name=Ear_height;B73v2_pos=3:19693920;1allele=A/G;version=Hapmap2;RS=rs817524659;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19754006	19754105	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19712352;1allele=A/C;version=Hapmap2;RS=rs129586567;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	19754093	19754192	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19712439;1allele=T/C;version=Hapmap2;RS=rs276985203;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19754159	19754258	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19712505;1allele=G/A;version=Hapmap2;RS=rs129554718;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	19754348	19754447	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19712694;1allele=G/C;version=Hapmap1;RS=rs131387646;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	19754348	19754447	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19712694;1allele=G/C;version=Hapmap1;RS=rs131387646;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	19755204	19755303	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19713550;1allele=C/T;version=Hapmap2;RS=rs802918289;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19785415	19785514	.	+	.	Name=Stalk_strength;B73v2_pos=3:19753020;1allele=G/A;version=Hapmap2;RS=rs821733800;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19786221	19786320	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19753826;1allele=C/G;version=Hapmap2;RS=rs1062449785;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	19793698	19793797	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19761303;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19818040	19818139	.	+	.	Name=Tassel_length;B73v2_pos=3:19785645;1allele=C/T;version=Hapmap2;RS=rs829187854;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19823306	19823405	.	+	.	Name=Tassel_length;B73v2_pos=3:19790911;1allele=G/C;version=Hapmap2;RS=rs809316789;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	19832612	19832711	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19800217;1allele=T/C;version=Hapmap1;RS=rs129390441;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19858410	19858509	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19826015;1allele=-/+;version=Hapmap2;RS=rs846756976;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	19859344	19859443	.	+	.	Name=Starch;B73v2_pos=3:19826949;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19859351	19859450	.	+	.	Name=Starch;B73v2_pos=3:19826956;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19860091	19860190	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19827696;1allele=C/A;version=Hapmap2;RS=rs131186408;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	19860816	19860915	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19828421;1allele=C/T;version=Hapmap2;RS=rs129406581;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19861279	19861378	.	+	.	Name=Ear_height;B73v2_pos=3:19828884;1allele=C/A;version=Hapmap2;RS=rs847860976;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19861853	19861952	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19829458;1allele=A/G;version=Hapmap2;RS=rs818713541;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	19862397	19862496	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19830002;1allele=C/T;version=Hapmap2;RS=rs810927546;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19862411	19862510	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19830016;1allele=C/T;version=Hapmap2;RS=rs846944451;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	19863137	19863236	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19830742;1allele=/GAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	19863414	19863513	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19831019;1allele=A/G;version=Hapmap2;RS=rs816088857;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19863917	19864016	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19831522;1allele=T/G;version=Hapmap2;RS=rs276985494;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	19864142	19864241	.	+	.	Name=Ear_height;B73v2_pos=3:19831747;1allele=A/G;version=Hapmap2;RS=rs804697720;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	19865410	19865509	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19833015;1allele=G/A;version=Hapmap2;RS=rs131388014;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	19870894	19870993	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19838499;1allele=T/C;version=Hapmap1;RS=rs131388047;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19886158	19886257	.	+	.	Name=Plant_height;B73v2_pos=3:19853764;1allele=A/G;version=Hapmap2;RS=rs828442182;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	19925796	19925895	.	+	.	Name=Stalk_strength;B73v2_pos=3:19892853;1allele=G/A;version=Hapmap2;RS=rs823915535;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	19958745	19958844	.	+	.	Name=Leaf_width;B73v2_pos=3:19925802;1allele=A/T;version=Hapmap1;RS=rs129540748;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	19963997	19964096	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19931054;1allele=T/C;version=Hapmap1;RS=rs131388131;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19963997	19964096	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:19931054;1allele=T/C;version=Hapmap1;RS=rs131388131;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19975089	19975188	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19942146;1allele=T/A;version=Hapmap2;RS=rs806642461;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	19976790	19976889	.	+	.	Name=Starch;B73v2_pos=3:19943847;1allele=C/T;version=Hapmap2;RS=rs276985671;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	20004237	20004336	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:19966171;1allele=G/T;version=Hapmap2;RS=rs129467541;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	20004889	20004988	.	+	.	Name=Sucrose;B73v2_pos=3:19966823;1allele=A/G;version=Hapmap1;RS=rs131388285;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	20005033	20005132	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19966967;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	20005068	20005167	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:19967002;1allele=A/T;version=Hapmap2;RS=rs844246390;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	20005680	20005779	.	+	.	Name=Starch;B73v2_pos=3:19967614;1allele=CC/;version=Hapmap1;RS=rs131388311;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	20005680	20005779	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:19967614;1allele=CC/;version=Hapmap1;RS=rs131388311;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	20008483	20008582	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:19970417;1allele=C/A;version=Hapmap2;RS=rs1063260908;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	20102498	20102597	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:20066989;1allele=A/G;version=Hapmap2;RS=rs276985920;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	20102874	20102973	.	+	.	Name=Stalk_strength;B73v2_pos=3:20067365;1allele=G/T;version=Hapmap2;RS=rs809322095;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	20130543	20130642	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:20095117;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	20130610	20130709	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:20095184;1allele=A/C;version=Hapmap2;RS=rs802267588;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	20213083	20213182	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:20173605;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	20240112	20240211	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:20202035;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	20265169	20265268	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:20233224;1allele=T/G;version=Hapmap2;RS=rs849458268;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	20330273	20330372	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:20291036;1allele=C/T;version=Hapmap2;RS=rs276986148;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	20415104	20415203	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:20369690;1allele=T/C;version=Hapmap2;RS=rs818450958;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	20421662	20421761	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:20375899;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	20423549	20423648	.	+	.	Name=Starch;B73v2_pos=3:20377786;1allele=A/G;version=Hapmap1;RS=rs131388571;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	20432118	20432217	.	+	.	Name=Starch;B73v2_pos=3:20386354;1allele=A/C;version=Hapmap1;RS=rs131388658;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	20432260	20432359	.	+	.	Name=Ear_height;B73v2_pos=3:20386496;1allele=T/C;version=Hapmap2;RS=rs129442056;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	20433640	20433739	.	+	.	Name=Starch;B73v2_pos=3:20387871;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	20440286	20440385	.	+	.	Name=Starch;B73v2_pos=3:20398576;1allele=C/T;version=Hapmap2;RS=rs131388702;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	20441115	20441214	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:20399405;1allele=A/T;version=Hapmap1;RS=rs131388731;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	20441450	20441549	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:20399740;1allele=C/G;version=Hapmap1;RS=rs129476599;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	20448749	20448848	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:20407040;1allele=G/A;version=Hapmap2;RS=rs830346012;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	20452999	20453098	.	+	.	Name=Plant_height;B73v2_pos=3:20411290;1allele=C/A;version=Hapmap2;RS=rs818218538;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	20635835	20635934	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:20588255;1allele=C/T;version=Hapmap2;RS=rs848081134;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	20640430	20640529	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:20592840;1allele=G/A;version=Hapmap2;RS=rs810798046;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	20640440	20640539	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:20592850;1allele=A/G;version=Hapmap2;RS=rs827145597;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	20690053	20690152	.	+	.	Name=Starch;B73v2_pos=3:20642912;1allele=G/A;version=Hapmap2;RS=rs818945981;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	20793165	20793264	.	+	.	Name=Ear_height;B73v2_pos=3:20749265;1allele=G/A;version=Hapmap2;RS=rs1063435661;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	20794512	20794611	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:20750612;1allele=T/C;version=Hapmap2;RS=rs1064077026;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	20794512	20794611	.	+	.	Name=Ear_height;B73v2_pos=3:20750612;1allele=T/C;version=Hapmap2;RS=rs1064077026;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	20794512	20794611	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:20750612;1allele=T/C;version=Hapmap2;RS=rs1064077026;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	20805740	20805839	.	+	.	Name=Plant_height;B73v2_pos=3:20761945;1allele=G/A;version=Hapmap2;RS=rs831294722;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	20805740	20805839	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:20761945;1allele=G/A;version=Hapmap2;RS=rs831294722;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21018427	21018526	.	+	.	Name=Leaf_length;B73v2_pos=3:20971704;1allele=C/T;version=Hapmap1;RS=rs131389181;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	21018531	21018630	.	+	.	Name=Plant_height;B73v2_pos=3:20971808;1allele=G/A;version=Hapmap2;RS=rs812512125;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21018531	21018630	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:20971808;1allele=G/A;version=Hapmap2;RS=rs812512125;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21077753	21077852	.	+	.	Name=Plant_height;B73v2_pos=3:21025631;1allele=G/A;version=Hapmap2;RS=rs830274529;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21190117	21190216	.	+	.	Name=Plant_height;B73v2_pos=3:21143282;1allele=C/A;version=Hapmap2;RS=rs818942362;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	21199176	21199275	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:21152341;1allele=A/G;version=Hapmap2;RS=rs806106177;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	21223363	21223462	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163233772;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	21223615	21223714	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:21176788;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	21250219	21250318	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:21203398;1allele=T/C;version=Hapmap2;RS=rs829442865;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	21254686	21254785	.	+	.	Name=Ear_height;B73v2_pos=3:21207865;1allele=T/A;version=Hapmap2;RS=rs845084943;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	21310138	21310237	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:21262432;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	21311083	21311182	.	+	.	Name=Malate;B73v2_pos=3:21261487;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	21312516	21312615	.	+	.	Name=Sucrose;B73v2_pos=3:21260054;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	21340564	21340663	.	+	.	Name=Ear_height;B73v2_pos=3:21334464;1allele=G/T;version=Hapmap2;RS=rs814701838;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	21428281	21428380	.	+	.	Name=Ear_height;B73v2_pos=3:21360646;1allele=A/C;version=Hapmap2;RS=rs833655906;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	21435903	21436002	.	+	.	Name=Ear_height;B73v2_pos=3:21368268;1allele=/TT;version=Hapmap1;RS=rs809281433;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	21435903	21436002	.	+	.	Name=Plant_height;B73v2_pos=3:21368268;1allele=/TT;version=Hapmap1;RS=rs809281433;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	21443664	21443763	.	+	.	Name=Ear_height;B73v2_pos=3:21404824;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	21655543	21655642	.	+	.	Name=Ear_height;B73v2_pos=3:21600509;1allele=T/C;version=Hapmap2;RS=rs810467134;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	21655543	21655642	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:21600509;1allele=T/C;version=Hapmap2;RS=rs810467134;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	21659217	21659316	.	+	.	Name=Ear_height;B73v2_pos=3:21604089;1allele=A/G;version=Hapmap2;RS=rs839811448;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	21689850	21689949	.	+	.	Name=Ear_height;B73v2_pos=3:21634864;1allele=G/A;version=Hapmap2;RS=rs129287369;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21727655	21727754	.	+	.	Name=Ear_height;B73v2_pos=3:21679489;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	21732917	21733016	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:21684751;1allele=G/T;version=Hapmap2;RS=rs803380991;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	21735314	21735413	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:21687148;1allele=C/A;version=Hapmap2;RS=rs845675751;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	21735314	21735413	.	+	.	Name=Ear_height;B73v2_pos=3:21687148;1allele=C/A;version=Hapmap2;RS=rs845675751;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	21773532	21773631	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:21732557;1allele=T/C;version=Hapmap2;RS=rs815233034;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	21779651	21779750	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:21738676;1allele=A/C;version=Hapmap2;RS=rs803019349;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	21780225	21780324	.	+	.	Name=Ear_height;B73v2_pos=3:21739250;1allele=A/G;version=Hapmap2;RS=rs830943949;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	21782507	21782606	.	+	.	Name=Ear_height;B73v2_pos=3:21741532;1allele=G/A;version=Hapmap2;RS=rs1063684865;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21782507	21782606	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:21741532;1allele=G/A;version=Hapmap2;RS=rs1063684865;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21794384	21794483	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:21753411;1allele=G/A;version=Hapmap2;RS=rs836716213;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	21917078	21917177	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:21853836;1allele=C/G;version=Hapmap1;RS=rs129503905;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	21917699	21917798	.	+	.	Name=Starch;B73v2_pos=3:21854457;1allele=T/C;version=Hapmap2;RS=rs276988982;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	21919337	21919436	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:21856095;1allele=C/A;version=Hapmap2;RS=rs276988990;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	21921217	21921316	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:21857975;1allele=T/G;version=Hapmap2;RS=rs129501066;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	21922568	21922667	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:21859326;1allele=A/G;version=Hapmap2;RS=rs813533742;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	21925145	21925244	.	+	.	Name=Ear_row_number;B73v2_pos=3:21861903;1allele=G/T;version=Hapmap2;RS=rs131389978;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	21986900	21986999	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:21928156;1allele=C/T;version=Hapmap2;RS=rs131390069;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	22060696	22060795	.	+	.	Name=Plant_height;B73v2_pos=3:21998778;1allele=GAC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22060696	22060795	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:21998778;1allele=GAC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22076682	22076781	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:22014765;1allele=C/T;version=Hapmap2;RS=rs810872869;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22076682	22076781	.	+	.	Name=Plant_height;B73v2_pos=3:22014765;1allele=C/T;version=Hapmap2;RS=rs810872869;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22158953	22159052	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22097038;1allele=C/T;version=Hapmap2;RS=rs820598892;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22160133	22160232	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:22098218;1allele=T/C;version=Hapmap2;RS=rs826129207;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	22188496	22188595	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:22129314;1allele=T/A;version=Hapmap2;RS=rs726402001;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	22212671	22212770	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22153488;1allele=G/T;version=Hapmap2;RS=rs1060899755;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	22214798	22214897	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22155567;1allele=C/T;version=Hapmap2;RS=rs812411401;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22216821	22216920	.	+	.	Name=Ear_height;B73v2_pos=3:22157590;1allele=C/T;version=Hapmap2;RS=rs803782998;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22216821	22216920	.	+	.	Name=Plant_height;B73v2_pos=3:22157590;1allele=C/T;version=Hapmap2;RS=rs803782998;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22217894	22217993	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22158663;1allele=T/A;version=Hapmap2;RS=rs131390195;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	22300135	22300234	.	+	.	Name=Ear_height;B73v2_pos=3:22240903;1allele=C/T;version=Hapmap2;RS=rs844972436;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22309745	22309844	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:22250513;1allele=T/G;version=Hapmap1;RS=rs131390244;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	22329103	22329202	.	+	.	Name=Ear_height;B73v2_pos=3:22269186;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22331107	22331206	.	+	.	Name=Leaf_length;B73v2_pos=3:22271817;1allele=A/G;version=Hapmap2;RS=rs276989568;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	22332292	22332391	.	+	.	Name=Plant_height;B73v2_pos=3:22273002;1allele=G/A;version=Hapmap2;RS=rs838707180;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	22332292	22332391	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:22273002;1allele=G/A;version=Hapmap2;RS=rs838707180;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	22337806	22337905	.	+	.	Name=Ear_height;B73v2_pos=3:22278516;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22340666	22340765	.	+	.	Name=Plant_height;B73v2_pos=3:22281376;1allele=G/A;version=Hapmap2;RS=rs1062992194;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	22377156	22377255	.	+	.	Name=Ear_height;B73v2_pos=3:22311006;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22448722	22448821	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:22382060;1allele=G/A;version=Hapmap2;RS=rs131390495;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	22451900	22451999	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:22385238;1allele=T/A;version=Hapmap2;RS=rs829907246;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	22454953	22455052	.	+	.	Name=Leaf_length;B73v2_pos=3:22388291;1allele=A/G;version=Hapmap2;RS=rs129592147;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	22456493	22456592	.	+	.	Name=Leaf_length;B73v2_pos=3:22389831;1allele=T/C;version=Hapmap2;RS=rs129377788;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	22456951	22457050	.	+	.	Name=Leaf_length;B73v2_pos=3:22390289;1allele=C/A;version=Hapmap2;RS=rs802850049;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	22492965	22493064	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22500746;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22530685	22530784	.	+	.	Name=Plant_height;B73v2_pos=3:22424640;1allele=A/T;version=Hapmap2;RS=rs276989821;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	22617934	22618033	.	+	.	Name=Leaf_length;B73v2_pos=3:22560391;1allele=T/A;version=Hapmap2;RS=rs129429282;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	22619525	22619624	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22561982;1allele=C/A;version=Hapmap1;RS=rs129548547;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	22620294	22620393	.	+	.	Name=Ear_height;B73v2_pos=3:22562751;1allele=T/C;version=Hapmap2;RS=rs840941206;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	22620432	22620531	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:22562889;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22620719	22620818	.	+	.	Name=Starch;B73v2_pos=3:22563176;1allele=C/A;version=Hapmap1;RS=rs131390733;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	22622145	22622244	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:22564602;1allele=A/C;version=Hapmap2;RS=rs276990173;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	22627931	22628030	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22570388;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22629298	22629397	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:22571755;1allele=G/C;version=Hapmap2;RS=rs131390835;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	22731235	22731334	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:22737361;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22743957	22744056	.	+	.	Name=Starch;B73v2_pos=3:22727213;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22747049	22747148	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:22724121;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	22929129	22929228	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:22924126;1allele=A/G;version=Hapmap2;RS=rs834560868;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	22964372	22964471	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:22873961;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	23002649	23002748	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:22958378;1allele=G/T;version=Hapmap2;RS=rs131391470;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	23054947	23055046	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:23010855;1allele=A/G;version=Hapmap2;RS=rs820048141;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	23116885	23116984	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:23077298;1allele=C/A;version=Hapmap1;RS=rs129272566;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	23127770	23127869	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:23088184;1allele=A/T;version=Hapmap2;RS=rs825755167;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	23138916	23139015	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:23099501;1allele=A/T;version=Hapmap2;RS=rs811812315;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	23141127	23141226	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:23101712;1allele=C/G;version=Hapmap2;RS=rs129534983;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	23194059	23194158	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:23144160;1allele=T/C;version=Hapmap2;RS=rs841812401;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	23217887	23217986	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:23176690;1allele=G/A;version=Hapmap2;RS=rs808010556;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	23217920	23218019	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:23176723;1allele=G/C;version=Hapmap1;RS=rs131391805;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	23221553	23221652	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:23180356;1allele=-/+;version=Hapmap2;RS=rs1060811420;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	23227759	23227858	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:23186562;1allele=T/C;version=Hapmap2;RS=rs846059381;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	23250889	23250988	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:23209698;1allele=C/A;version=Hapmap2;RS=rs129541380;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	23296974	23297073	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:23250309;1allele=G/T;version=Hapmap1;RS=rs131391916;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	23395992	23396091	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:23357290;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	23425687	23425786	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:23424208;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	23563197	23563296	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:23492764;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	23586325	23586424	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:23547331;1allele=C/T;version=Hapmap2;RS=rs276991387;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	23676834	23676933	.	+	.	Name=Tassel_length;B73v2_pos=3:23638278;1allele=C/T;version=Hapmap2;RS=rs846989325;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	23731380	23731479	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:23662540;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	23781124	23781223	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:23735870;1allele=A/T;version=Hapmap2;RS=rs821618875;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	23787516	23787615	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:23742262;1allele=T/C;version=Hapmap2;RS=rs842379511;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	23803242	23803341	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:23757988;1allele=A/T;version=Hapmap2;RS=rs829775464;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	23823929	23824028	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:23778221;1allele=T/A;version=Hapmap2;RS=rs831703343;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	23891841	23891940	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:23846925;1allele=C/T;version=Hapmap2;RS=rs835393923;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	23891841	23891940	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:23846925;1allele=C/T;version=Hapmap2;RS=rs835393923;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	23944319	23944418	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:23893070;1allele=A/G;version=Hapmap2;RS=rs805621981;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	23944469	23944568	.	+	.	Name=Tassel_length;B73v2_pos=3:23893220;1allele=A/G;version=Hapmap2;RS=rs811000783;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	23948584	23948683	.	+	.	Name=Glucose;B73v2_pos=3:23897335;1allele=ATGAGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24006351	24006450	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:23950832;1allele=G/T;version=Hapmap2;RS=rs841289815;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	24136958	24137057	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:23993147;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24168421	24168520	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:24099031;1allele=G/A;version=Hapmap2;RS=rs810461825;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	24178037	24178136	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24108647;1allele=T/C;version=Hapmap2;RS=rs129575940;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	24178120	24178219	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:24108730;1allele=G/A;version=Hapmap2;RS=rs836437279;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	24291134	24291233	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:24216878;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24348783	24348882	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24278872;1allele=A/G;version=Hapmap2;RS=rs815648869;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	24362747	24362846	.	+	.	Name=Glucose;B73v2_pos=3:24292837;1allele=G/A;version=Hapmap2;RS=rs276992185;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	24455078	24455177	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:24386984;1allele=A/G;version=Hapmap2;RS=rs129408083;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	24455506	24455605	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24387412;1allele=T/C;version=Hapmap1;RS=rs131392431;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	24455506	24455605	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:24387412;1allele=T/C;version=Hapmap2;RS=rs131392431;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	24513232	24513331	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24476136;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24514110	24514209	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24475258;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24514114	24514213	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24475254;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24514517	24514616	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24474851;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24529845	24529944	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:24459528;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	24719710	24719809	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:24646937;1allele=G/A;version=Hapmap2;RS=rs129572483;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	24819428	24819527	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:24749455;1allele=T/A;version=Hapmap2;RS=rs841174734;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	24984451	24984550	.	+	.	Name=Leaf_length;B73v2_pos=3:24917274;1allele=C/T;version=Hapmap2;RS=rs276992978;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	24985848	24985947	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:24918671;1allele=C/T;version=Hapmap2;RS=rs839821742;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	25014675	25014774	.	+	.	Name=Plant_height;B73v2_pos=3:24947178;1allele=A/G;version=Hapmap2;RS=rs129560258;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	25085960	25086059	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:25010754;1allele=C/T;version=Hapmap2;RS=rs848783204;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	25142718	25142817	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:25070089;1allele=G/A;version=Hapmap2;RS=rs823415303;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	25163183	25163282	.	+	.	Name=Starch;B73v2_pos=3:25091496;1allele=C/T;version=Hapmap2;RS=rs828331456;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	25195729	25195828	.	+	.	Name=Malate;B73v2_pos=3:25122763;1allele=-/+;version=Hapmap2;RS=rs844979728;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	25198031	25198130	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:25125065;1allele=C/T;version=Hapmap2;RS=rs813413174;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	25200793	25200892	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:25127827;1allele=A/C;version=Hapmap2;RS=rs813957510;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	25204930	25205029	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:25131964;1allele=A/G;version=Hapmap2;RS=rs805419938;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	25304008	25304107	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:25216987;1allele=C/T;version=Hapmap2;RS=rs276993363;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	25309299	25309398	.	+	.	Name=Leaf_width;B73v2_pos=3:25222278;1allele=/GCCATG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	25563598	25563697	.	+	.	Name=Glucose;B73v2_pos=3:25494296;1allele=G/A;version=Hapmap2;RS=rs827877079;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	25595636	25595735	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:25521940;1allele=T/A;version=Hapmap2;RS=rs838288079;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	25639611	25639710	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:25565261;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	25639738	25639837	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:25565388;1allele=A/G;version=Hapmap2;RS=rs846069157;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	25639740	25639839	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:25565390;1allele=C/T;version=Hapmap2;RS=rs812630443;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	25641822	25641921	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:25567472;1allele=C/A;version=Hapmap2;RS=rs803112623;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	25653516	25653615	.	+	.	Name=Leaf_length;B73v2_pos=3:25578699;1allele=G/A;version=Hapmap2;RS=rs828416354;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	25663472	25663571	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:25588655;1allele=T/C;version=Hapmap2;RS=rs805293727;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	25698188	25698287	.	+	.	Name=Plant_height;B73v2_pos=3:25623170;1allele=G/A;version=Hapmap2;RS=rs844785322;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	25904492	25904591	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:25860068;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	25923581	25923680	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:25879157;1allele=/GG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	25924831	25924930	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:25880407;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	25926669	25926768	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:25882245;1allele=G/A;version=Hapmap2;RS=rs846970676;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	25970967	25971066	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:25926485;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	26051966	26052065	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:26007384;1allele=A/T;version=Hapmap1;RS=rs129583518;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	26054343	26054442	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:26009761;1allele=C/T;version=Hapmap2;RS=rs725327198;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	26134731	26134830	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:26090158;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	26145693	26145792	.	+	.	Name=Leaf_width;B73v2_pos=3:26101120;1allele=C/T;version=Hapmap2;RS=rs131393729;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	26145828	26145927	.	+	.	Name=Leaf_width;B73v2_pos=3:26101255;1allele=/CTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	26206592	26206691	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:26155325;1allele=C/A;version=Hapmap2;RS=rs815028817;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	26209364	26209463	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:26158096;1allele=C/T;version=Hapmap2;RS=rs802835948;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	26209638	26209737	.	+	.	Name=Leaf_width;B73v2_pos=3:26158370;1allele=C/G;version=Hapmap2;RS=rs803902406;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	26216514	26216613	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:26165246;1allele=A/G;version=Hapmap2;RS=rs1064431803;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	26363528	26363627	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:26311475;1allele=G/-;version=Hapmap1;RS=rs131393978;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	26385894	26385993	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:26335272;1allele=T/A;version=Hapmap2;RS=rs812144244;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	26403024	26403123	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:26352414;1allele=T/G;version=Hapmap2;RS=rs805531213;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	26403024	26403123	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:26352414;1allele=T/G;version=Hapmap2;RS=rs805531213;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	26441256	26441355	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:26390322;1allele=T/C;version=Hapmap2;RS=rs276994976;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	26444356	26444455	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:26393422;1allele=A/C;version=Hapmap2;RS=rs1062840206;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	26450856	26450955	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:26399922;1allele=C/T;version=Hapmap2;RS=rs129598337;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	27594756	27594855	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:27516399;1allele=T/A;version=Hapmap2;RS=rs276995454;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	27676604	27676703	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:27560648;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	27682465	27682564	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:27554787;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	27682631	27682730	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:27554621;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	27684688	27684787	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:27552564;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	27685506	27685605	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:27551746;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	27796767	27796866	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:27686695;1allele=T/C;version=Hapmap2;RS=rs276995691;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	27882791	27882890	.	+	.	Name=Days_to_silk;B73v2_pos=3:27768849;1allele=T/C;version=Hapmap2;RS=rs808357268;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	28263341	28263440	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28141742;1allele=C/T;version=Hapmap2;RS=rs1062715781;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	28300020	28300119	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28179818;1allele=C/A;version=Hapmap1;RS=rs131394933;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	28300277	28300376	.	+	.	Name=Cob_diameter;B73v2_pos=3:28180075;1allele=C/A;version=Hapmap2;RS=rs869372735;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	28300298	28300397	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28180096;1allele=A/G;version=Hapmap1;RS=rs131394941;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	28308092	28308191	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28187891;1allele=A/G;version=Hapmap2;RS=rs1060688063;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	28309858	28309957	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28189657;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	28310514	28310613	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28190313;1allele=C/T;version=Hapmap2;RS=rs1062377674;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	28311165	28311264	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28190964;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	28311816	28311915	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28191615;1allele=A/C;version=Hapmap2;RS=rs276996224;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	28336725	28336824	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:28215392;1allele=T/C;version=Hapmap2;RS=rs131394970;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	28343977	28344076	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28221536;1allele=A/G;version=Hapmap2;RS=rs129495910;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	28346740	28346839	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:28224299;1allele=C/G;version=Hapmap2;RS=rs131395043;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	28350985	28351084	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=2:36374318;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	28420121	28420220	.	+	.	Name=Leaf_width;B73v2_pos=3:28295761;1allele=A/C;version=Hapmap2;RS=rs1062803951;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	28458644	28458743	.	+	.	Name=Leaf_width;B73v2_pos=3:28336971;1allele=T/C;version=Hapmap1;RS=rs131395226;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	28731344	28731443	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:28609953;1allele=G/T;version=Hapmap2;RS=rs844455253;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	28789894	28789993	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:28720199;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	28795370	28795469	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:28714723;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	28842826	28842925	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:28667268;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	28851673	28851772	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:28736692;1allele=T/A;version=Hapmap2;RS=rs276996987;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	28930347	28930446	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:28806597;1allele=C/T;version=Hapmap2;RS=rs1063881402;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	28957903	28958002	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:28830064;1allele=G/A;version=Hapmap1;RS=rs129594541;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	28959122	28959221	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:28831283;1allele=G/A;version=Hapmap2;RS=rs129307694;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	28963098	28963197	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:28835259;1allele=C/T;version=Hapmap2;RS=rs129433684;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	28963512	28963611	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:28835673;1allele=A/G;version=Hapmap2;RS=rs129336100;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	28964064	28964163	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:28836225;1allele=C/G;version=Hapmap2;RS=rs129360148;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	29040655	29040754	.	+	.	Name=Malate;B73v2_pos=3:28921246;1allele=C/G;version=Hapmap2;RS=rs129271827;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	29040777	29040876	.	+	.	Name=Leaf_length;B73v2_pos=3:28921368;1allele=A/C;version=Hapmap1;RS=rs131395723;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	29169982	29170081	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:29053810;1allele=C/T;version=Hapmap2;RS=rs810801504;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	29211684	29211783	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:29093149;1allele=T/C;version=Hapmap2;RS=rs276997706;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	29217582	29217681	.	+	.	Name=Malate;B73v2_pos=3:29099047;1allele=A/G;version=Hapmap2;RS=rs840396777;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	29277672	29277771	.	+	.	Name=Leaf_width;B73v2_pos=3:29161601;1allele=T/G;version=Hapmap2;RS=rs1063783977;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	29292368	29292467	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:29176576;1allele=A/C;version=Hapmap2;RS=rs129604960;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	29325908	29326007	.	+	.	Name=Malate;B73v2_pos=3:29210560;1allele=C/T;version=Hapmap1;RS=rs131395955;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	29327425	29327524	.	+	.	Name=Malate;B73v2_pos=3:29212077;1allele=C/T;version=Hapmap2;RS=rs810775215;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	29455105	29455204	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:29335412;1allele=C/T;version=Hapmap2;RS=rs816910994;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	29473718	29473817	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:29354026;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	29487914	29488013	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:29368221;1allele=G/T;version=Hapmap2;RS=rs814961870;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	29574778	29574877	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:29455055;1allele=A/G;version=Hapmap2;RS=rs1064460089;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	29685132	29685231	.	+	.	Name=Nitrate;B73v2_pos=1:251873814;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	29735031	29735130	.	+	.	Name=Leaf_width;B73v2_pos=3:29615537;1allele=/TGCTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	29774859	29774958	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:29649771;1allele=C/T;version=Hapmap2;RS=rs820534964;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	29800560	29800659	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:29675472;1allele=C/T;version=Hapmap2;RS=rs840164283;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	29803748	29803847	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:29678660;1allele=G/A;version=Hapmap2;RS=rs834979167;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	29822329	29822428	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:29697243;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	29837036	29837135	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:29711962;1allele=A/G;version=Hapmap2;RS=rs129308135;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	29839790	29839889	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:29714716;1allele=A/G;version=Hapmap2;RS=rs834055335;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	29904319	29904418	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:29774938;1allele=T/G;version=Hapmap2;RS=rs822183636;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	29904319	29904418	.	+	.	Name=Days_to_silk;B73v2_pos=3:29774938;1allele=T/G;version=Hapmap2;RS=rs822183636;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	29904329	29904428	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:29774948;1allele=G/A;version=Hapmap2;RS=rs828702945;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	29923756	29923855	.	+	.	Name=Cob_diameter;B73v2_pos=3:29794376;1allele=A/G;version=Hapmap2;RS=rs835585182;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	29933090	29933189	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:29803710;1allele=G/A;version=Hapmap2;RS=rs129368942;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	29964552	29964651	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:29834277;1allele=A/G;version=Hapmap2;RS=rs830943410;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	30057192	30057291	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:29943503;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	30060226	30060325	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:29946537;1allele=A/G;version=Hapmap2;RS=rs809062834;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	30060235	30060334	.	+	.	Name=Leaf_width;B73v2_pos=3:29946546;1allele=T/A;version=Hapmap2;RS=rs276998535;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	30064066	30064165	.	+	.	Name=Cob_diameter;B73v2_pos=3:29950377;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	30064247	30064346	.	+	.	Name=Leaf_width;B73v2_pos=3:29950558;1allele=A/C;version=Hapmap2;RS=rs276998551;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	30065726	30065825	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:29952037;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	30080020	30080119	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:29966328;1allele=T/C;version=Hapmap2;RS=rs131396379;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	30080663	30080762	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:29966971;1allele=C/T;version=Hapmap2;RS=rs129604926;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	30081445	30081544	.	+	.	Name=Leaf_width;B73v2_pos=3:29967753;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	30088898	30088997	.	+	.	Name=Leaf_width;B73v2_pos=3:29975206;1allele=A/G;version=Hapmap2;RS=rs129401434;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	30127422	30127521	.	+	.	Name=Cob_diameter;B73v2_pos=3:30008835;1allele=C/T;version=Hapmap2;RS=rs839398680;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	30164561	30164660	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:30046340;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	30164742	30164841	.	+	.	Name=Malate;B73v2_pos=3:30046521;1allele=T/C;version=Hapmap1;RS=rs131396510;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	30164747	30164846	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:30046526;1allele=C/T;version=Hapmap2;RS=rs131396512;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	30177792	30177891	.	+	.	Name=Days_to_silk;B73v2_pos=3:30057707;1allele=G/A;version=Hapmap2;RS=rs129538927;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	30189432	30189531	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:30066579;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	30270138	30270237	.	+	.	Name=Ear_height;B73v2_pos=3:30143987;1allele=T/C;version=Hapmap2;RS=rs827176375;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	30317404	30317503	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:30191537;1allele=C/T;version=Hapmap2;RS=rs276999055;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	30329951	30330050	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:30208744;1allele=A/T;version=Hapmap2;RS=rs819429652;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	30479065	30479164	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:30372126;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	31153242	31153341	.	+	.	Name=Malate;B73v2_pos=3:31055788;1allele=T/A;version=Hapmap2;RS=rs129283889;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	31155754	31155853	.	+	.	Name=Malate;B73v2_pos=3:31058300;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	31329700	31329799	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:31128742;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	31431937	31432035	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:31349015;1allele=T/C;version=Hapmap2;RS=rs277000370;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	31588172	31588271	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:31491607;1allele=C/T;version=Hapmap2;RS=rs836963006;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	31648274	31648373	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:31552838;1allele=A/G;version=Hapmap2;RS=rs1061521747;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	31740229	31740328	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:31645233;1allele=T/G;version=Hapmap2;RS=rs836725657;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	32099280	32099379	.	+	.	Name=Plant_height;B73v2_pos=3:32000559;1allele=G/A;version=Hapmap2;RS=rs836390431;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	32178668	32178767	.	+	.	Name=Malate;B73v2_pos=3:32081832;1allele=T/C;version=Hapmap2;RS=rs1061927282;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	32225062	32225161	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:32127547;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	32327557	32327656	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:32229311;1allele=G/C;version=Hapmap2;RS=rs816384579;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	32426455	32426554	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:32327556;1allele=T/C;version=Hapmap2;RS=rs840711696;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	32996540	32996639	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:32885733;1allele=C/T;version=Hapmap2;RS=rs1063826709;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	32996920	32997019	.	+	.	Name=Days_to_silk;B73v2_pos=3:32886113;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33059997	33060096	.	+	.	Name=Leaf_width;B73v2_pos=3:32944996;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33069787	33069886	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:32954786;1allele=A/T;version=Hapmap2;RS=rs724231818;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	33104828	33104927	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:32989828;1allele=C/T;version=Hapmap2;RS=rs822884621;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33105320	33105419	.	+	.	Name=Days_to_silk;B73v2_pos=3:32990320;1allele=G/T;version=Hapmap2;RS=rs810785491;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	33282285	33282384	.	+	.	Name=Tassel_length;B73v2_pos=3:33157955;1allele=G/C;version=Hapmap2;RS=rs835093808;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	33294358	33294457	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:33170028;1allele=C/T;version=Hapmap2;RS=rs839423223;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33302753	33302852	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:33178423;1allele=G/A;version=Hapmap2;RS=rs825940913;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	33541319	33541418	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:33412176;1allele=T/C;version=Hapmap2;RS=rs843619516;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	33541409	33541508	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:33412266;1allele=C/T;version=Hapmap2;RS=rs820754746;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	33565927	33566026	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:33421906;1allele=A/C;version=Hapmap2;RS=rs819465612;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	33572127	33572226	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:33427602;1allele=A/C;version=Hapmap2;RS=rs725927336;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	33597346	33597445	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:33441309;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33598034	33598133	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:33440619;1allele=G/T;version=Hapmap2;RS=rs837987338;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33598035	33598134	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:33440618;1allele=G/T;version=Hapmap2;RS=rs807685317;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	33598503	33598602	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:33440150;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33598505	33598604	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:33440148;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33607983	33608082	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:33472151;1allele=G/A;version=Hapmap2;RS=rs277003697;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	33608561	33608660	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:33472729;1allele=A/G;version=Hapmap2;RS=rs850471729;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	33610944	33611043	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:33475112;1allele=C/T;version=Hapmap2;RS=rs802224321;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33610944	33611043	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:33475112;1allele=C/T;version=Hapmap2;RS=rs802224321;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33611053	33611152	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:33475221;1allele=C/G;version=Hapmap2;RS=rs832923742;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	33612017	33612116	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:33476185;1allele=T/C;version=Hapmap2;RS=rs813108542;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33614134	33614233	.	+	.	Name=Plant_height;B73v2_pos=3:33478302;1allele=G/T;version=Hapmap2;RS=rs812323523;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	33614134	33614233	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:33478302;1allele=G/T;version=Hapmap2;RS=rs812323523;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	33614134	33614233	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:33478302;1allele=G/T;version=Hapmap2;RS=rs812323523;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	33615073	33615172	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:33479250;1allele=C/T;version=Hapmap2;RS=rs726849858;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33618299	33618398	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:33480544;1allele=A/G;version=Hapmap2;RS=rs840159017;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	33640754	33640853	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:33503012;1allele=T/C;version=Hapmap2;RS=rs129386791;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33662418	33662517	.	+	.	Name=Days_to_silk;B73v2_pos=3:33524676;1allele=T/C;version=Hapmap2;RS=rs841961511;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	33696494	33696593	.	+	.	Name=Ear_height;B73v2_pos=3:33558752;1allele=T/G;version=Hapmap2;RS=rs815592089;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	33703034	33703133	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:33565292;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33703090	33703189	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:33565348;1allele=A/G;version=Hapmap2;RS=rs829511480;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	33711802	33711901	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:33574210;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33726132	33726231	.	+	.	Name=Plant_height;B73v2_pos=3:33588721;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33726132	33726231	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:33588721;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33726658	33726757	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:33589247;1allele=A/T;version=Hapmap2;RS=rs850176027;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	33726658	33726757	.	+	.	Name=Plant_height;B73v2_pos=3:33589247;1allele=A/T;version=Hapmap2;RS=rs850176027;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	33736430	33736529	.	+	.	Name=Ear_height;B73v2_pos=3:33598873;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33886311	33886410	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:33746083;1allele=G/T;version=Hapmap2;RS=rs836848998;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	33903887	33903986	.	+	.	Name=Plant_height;B73v2_pos=3:33763659;1allele=G/T;version=Hapmap2;RS=rs129366364;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	33915931	33916030	.	+	.	Name=Starch;B73v2_pos=3:33775703;1allele=G/A;version=Hapmap2;RS=rs1063856609;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	33922002	33922101	.	+	.	Name=Height_above_ear;B73v2_pos=3:33781774;1allele=C/T;version=Hapmap2;RS=rs847908714;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33923476	33923575	.	+	.	Name=Malate;B73v2_pos=3:33783248;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33925303	33925402	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:33785075;1allele=C/T;version=Hapmap2;RS=rs129285622;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	33927247	33927346	.	+	.	Name=Days_to_silk;B73v2_pos=3:33787019;1allele=G/T;version=Hapmap2;RS=rs848143331;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	33937736	33937835	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:33797508;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	33953363	33953462	.	+	.	Name=Plant_height;B73v2_pos=3:33812459;1allele=A/G;version=Hapmap2;RS=rs824581670;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	33990862	33990961	.	+	.	Name=Ear_height;B73v2_pos=3:33848523;1allele=C/T;version=Hapmap2;RS=rs808081661;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	34014159	34014258	.	+	.	Name=Height_above_ear;B73v2_pos=3:33869445;1allele=T/C;version=Hapmap2;RS=rs841643729;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34014686	34014785	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:33869972;1allele=T/G;version=Hapmap2;RS=rs830275665;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	34015104	34015203	.	+	.	Name=Height_above_ear;B73v2_pos=3:33870390;1allele=T/C;version=Hapmap2;RS=rs844146749;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34019393	34019492	.	+	.	Name=Ear_height;B73v2_pos=3:33874679;1allele=G/A;version=Hapmap2;RS=rs828186058;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	34023574	34023673	.	+	.	Name=Plant_height;B73v2_pos=3:33878860;1allele=T/C;version=Hapmap2;RS=rs816950061;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	34023863	34023962	.	+	.	Name=Ear_height;B73v2_pos=3:33879149;1allele=G/A;version=Hapmap2;RS=rs816972767;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	34062442	34062541	.	+	.	Name=Ear_height;B73v2_pos=3:33917893;1allele=G/A;version=Hapmap2;RS=rs846060371;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	34064363	34064462	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:33919814;1allele=C/T;version=Hapmap2;RS=rs816376032;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	34064779	34064878	.	+	.	Name=Plant_height;B73v2_pos=3:33920230;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	34065474	34065573	.	+	.	Name=Ear_height;B73v2_pos=3:33920925;1allele=A/G;version=Hapmap2;RS=rs809945341;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	34097450	34097549	.	+	.	Name=Ear_height;B73v2_pos=3:33952903;1allele=G/A;version=Hapmap2;RS=rs816170477;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	34115225	34115324	.	+	.	Name=Ear_height;B73v2_pos=3:33970680;1allele=T/A;version=Hapmap2;RS=rs814143552;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	34115677	34115776	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:33971132;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	34116299	34116398	.	+	.	Name=Plant_height;B73v2_pos=3:33971754;1allele=T/A;version=Hapmap1;RS=rs131398587;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	34116358	34116457	.	+	.	Name=Height_above_ear;B73v2_pos=3:33971813;1allele=C/A;version=Hapmap1;RS=rs131398589;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	34118186	34118285	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:33973641;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	34122096	34122195	.	+	.	Name=Ear_height;B73v2_pos=3:33977551;1allele=C/T;version=Hapmap2;RS=rs803717079;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	34143349	34143448	.	+	.	Name=Ear_height;B73v2_pos=3:33994901;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	34143842	34143941	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:33994408;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	34177609	34177708	.	+	.	Name=Ear_height;B73v2_pos=3:34029664;1allele=C/T;version=Hapmap2;RS=rs804921419;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	34178354	34178453	.	+	.	Name=Ear_height;B73v2_pos=3:34030409;1allele=A/T;version=Hapmap2;RS=rs820674013;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	34183441	34183540	.	+	.	Name=Plant_height;B73v2_pos=3:34035496;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	34258162	34258261	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:34122111;1allele=A/G;version=Hapmap2;RS=rs129264096;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	34399406	34399505	.	+	.	Name=Height_above_ear;B73v2_pos=3:34237790;1allele=A/G;version=Hapmap2;RS=rs802751067;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	34411476	34411575	.	+	.	Name=Plant_height;B73v2_pos=3:34249860;1allele=A/G;version=Hapmap2;RS=rs1062540074;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	34411866	34411965	.	+	.	Name=Plant_height;B73v2_pos=3:34250250;1allele=C/T;version=Hapmap2;RS=rs826344009;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	34412303	34412402	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:34250687;1allele=C/T;version=Hapmap2;RS=rs277005302;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34466521	34466620	.	+	.	Name=Ear_height;B73v2_pos=3:34310548;1allele=G/C;version=Hapmap2;RS=rs820035060;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	34500933	34501032	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:34344960;1allele=C/T;version=Hapmap2;RS=rs1062502256;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34510336	34510435	.	+	.	Name=Ear_height;B73v2_pos=3:34354303;1allele=T/C;version=Hapmap2;RS=rs129320197;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34616731	34616830	.	+	.	Name=Leaf_width;B73v2_pos=3:34441414;1allele=A/G;version=Hapmap2;RS=rs846637823;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	34669923	34670022	.	+	.	Name=Leaf_width;B73v2_pos=3:34493979;1allele=T/C;version=Hapmap2;RS=rs1064687425;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34670101	34670200	.	+	.	Name=Leaf_width;B73v2_pos=3:34494157;1allele=A/T;version=Hapmap2;RS=rs816616795;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	34670308	34670407	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:34494364;1allele=T/C;version=Hapmap2;RS=rs277005707;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34671064	34671163	.	+	.	Name=Leaf_width;B73v2_pos=3:34495120;1allele=A/G;version=Hapmap2;RS=rs277005718;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	34673398	34673497	.	+	.	Name=Malate;B73v2_pos=3:34497454;1allele=C/A;version=Hapmap2;RS=rs277005741;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	34683800	34683899	.	+	.	Name=Tassel_length;B73v2_pos=3:34507858;1allele=T/C;version=Hapmap2;RS=rs824020346;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34684914	34685013	.	+	.	Name=Ear_height;B73v2_pos=3:34508972;1allele=T/C;version=Hapmap2;RS=rs849585040;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	34715081	34715180	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:34539139;1allele=G/A;version=Hapmap2;RS=rs813858962;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	34736108	34736207	.	+	.	Name=Leaf_width;B73v2_pos=3:34559997;1allele=G/A;version=Hapmap2;RS=rs801710444;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	34822320	34822419	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:34646210;1allele=A/G;version=Hapmap2;RS=rs824744884;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	34911658	34911757	.	+	.	Name=Ear_height;B73v2_pos=3:34735548;1allele=G/A;version=Hapmap2;RS=rs842308844;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	34978776	34978875	.	+	.	Name=Ear_height;B73v2_pos=3:34802057;1allele=T/C;version=Hapmap2;RS=rs808188805;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	35021738	35021837	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:34845019;1allele=A/G;version=Hapmap1;RS=rs129607855;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	35315569	35315668	.	+	.	Name=Leaf_width;B73v2_pos=3:35132843;1allele=C/T;version=Hapmap2;RS=rs818720998;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	35598878	35598977	.	+	.	Name=Leaf_width;B73v2_pos=3:35421679;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	35718974	35719073	.	+	.	Name=Days_to_silk;B73v2_pos=3:35555916;1allele=A/G;version=Hapmap2;RS=rs835538201;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	35939148	35939247	.	+	.	Name=Plant_height;B73v2_pos=3:35756180;1allele=C/T;version=Hapmap2;RS=rs129396280;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	36015325	36015424	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:35824795;1allele=G/A;version=Hapmap2;RS=rs822710243;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	36015742	36015841	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:35825212;1allele=T/C;version=Hapmap2;RS=rs827488019;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	36016431	36016530	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:35825901;1allele=G/A;version=Hapmap2;RS=rs809363142;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	36084795	36084894	.	+	.	Name=Leaf_width;B73v2_pos=3:35888827;1allele=T/C;version=Hapmap2;RS=rs810757805;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	36125653	36125752	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:35929683;1allele=+/-;version=Hapmap2;RS=rs815170503;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	36162558	36162657	.	+	.	Name=Leaf_width;B73v2_pos=3:35961987;1allele=G/A;version=Hapmap2;RS=rs277008855;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	36192991	36193090	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:35992553;1allele=T/G;version=Hapmap2;RS=rs804687712;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	36366870	36366969	.	+	.	Name=Glucose;B73v2_pos=3:36167898;1allele=T/C;version=Hapmap2;RS=rs824426932;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	36490260	36490359	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:36307162;1allele=T/C;version=Hapmap2;RS=rs277009606;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	36637929	36638028	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:36433136;1allele=A/G;version=Hapmap2;RS=rs129469870;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	36825164	36825263	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:36623980;1allele=C/A;version=Hapmap2;RS=rs821076298;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	36986210	36986309	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:36785672;1allele=C/T;version=Hapmap2;RS=rs802306643;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	37039010	37039109	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:36840074;1allele=A/C;version=Hapmap2;RS=rs814951488;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	37125828	37125927	.	+	.	Name=Plant_height;B73v2_pos=3:36926062;1allele=T/A;version=Hapmap2;RS=rs848329189;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	37149925	37150024	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:36950167;1allele=C/T;version=Hapmap2;RS=rs813955841;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	37165433	37165532	.	+	.	Name=Days_to_silk;B73v2_pos=3:36965675;1allele=G/A;version=Hapmap2;RS=rs828838077;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	37382428	37382527	.	+	.	Name=Ear_height;B73v2_pos=3:37175384;1allele=A/G;version=Hapmap2;RS=rs803354845;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	37476783	37476882	.	+	.	Name=Cob_diameter;B73v2_pos=3:37235140;1allele=A/G;version=Hapmap2;RS=rs803846255;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	37583935	37584034	.	+	.	Name=Leaf_width;B73v2_pos=3:37354526;1allele=C/T;version=Hapmap2;RS=rs129480098;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	37585763	37585862	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:37356354;1allele=C/T;version=Hapmap2;RS=rs847757745;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	38044733	38044832	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:37836500;1allele=G/A;version=Hapmap2;RS=rs821602830;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	38132875	38132974	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:37926240;1allele=A/G;version=Hapmap2;RS=rs806893152;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	38178481	38178580	.	+	.	Name=Ear_height;B73v2_pos=3:37970294;1allele=T/A;version=Hapmap2;RS=rs819536121;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	38178545	38178644	.	+	.	Name=Ear_height;B73v2_pos=3:37970358;1allele=G/T;version=Hapmap2;RS=rs835567336;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	38257008	38257107	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:38046406;1allele=G/A;version=Hapmap2;RS=rs820791583;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	38265990	38266089	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:38055388;1allele=G/A;version=Hapmap2;RS=rs277012073;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	38269977	38270076	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:38059375;1allele=T/A;version=Hapmap2;RS=rs832762704;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	38469199	38469298	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:38256690;1allele=G/A;version=Hapmap1;RS=rs131401031;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	38469199	38469298	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:38256690;1allele=G/A;version=Hapmap1;RS=rs131401031;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	38539152	38539251	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:38326649;1allele=A/T;version=Hapmap2;RS=rs830281930;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	39013092	39013191	.	+	.	Name=Malate;B73v2_pos=3:38781857;1allele=A/C;version=Hapmap2;RS=rs835597113;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	39275860	39275959	.	+	.	Name=Days_to_silk;B73v2_pos=3:39269422;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	39566628	39566727	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:39540665;1allele=A/G;version=Hapmap2;RS=rs847875868;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	39566827	39566926	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:39540864;1allele=A/T;version=Hapmap2;RS=rs810418969;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	39671660	39671759	.	+	.	Name=Plant_height;B73v2_pos=3:39645112;1allele=T/G;version=Hapmap2;RS=rs277013662;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	39819181	39819280	.	+	.	Name=Plant_height;B73v2_pos=3:39789527;1allele=A/G;version=Hapmap2;RS=rs277013979;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	40308847	40308946	.	+	.	Name=Tassel_length;B73v2_pos=3:40263526;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	40357110	40357209	.	+	.	Name=Ear_height;B73v2_pos=3:40310692;1allele=A/G;version=Hapmap2;RS=rs804994391;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	40952212	40952311	.	+	.	Name=Plant_height;B73v2_pos=3:40885014;1allele=G/A;version=Hapmap2;RS=rs129435243;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	40977236	40977335	.	+	.	Name=Days_to_silk;B73v2_pos=3:40910042;1allele=C/G;version=Hapmap2;RS=rs131401857;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	41202623	41202722	.	+	.	Name=Tassel_length;B73v2_pos=3:41136383;1allele=G/A;version=Hapmap2;RS=rs129457725;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	41480796	41480895	.	+	.	Name=Days_to_silk;B73v2_pos=3:41404178;1allele=A/G;version=Hapmap2;RS=rs131402224;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	41480984	41481083	.	+	.	Name=Plant_height;B73v2_pos=3:41404366;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	41641567	41641666	.	+	.	Name=Malate;B73v2_pos=3:41575869;1allele=G/A;version=Hapmap2;RS=rs813196435;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	41771481	41771580	.	+	.	Name=Height_above_ear;B73v2_pos=3:41742706;1allele=G/C;version=Hapmap2;RS=rs813981324;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	43119003	43119102	.	+	.	Name=Days_to_silk;B73v2_pos=3:43224443;1allele=T/C;version=Hapmap2;RS=rs848365269;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	43183177	43183276	.	+	.	Name=Malate;B73v2_pos=3:43280587;1allele=G/A;version=Hapmap2;RS=rs823756076;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	43251770	43251869	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:43347680;1allele=T/G;version=Hapmap2;RS=rs842197905;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	43273468	43273567	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:43369376;1allele=A/G;version=Hapmap2;RS=rs843973945;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	43332976	43333075	.	+	.	Name=Days_to_silk;B73v2_pos=3:43421778;1allele=A/G;version=Hapmap2;RS=rs819550140;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	43389888	43389987	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:43465682;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	43613610	43613709	.	+	.	Name=Days_to_silk;B73v2_pos=3:43729515;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	43746062	43746161	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:43843464;1allele=C/T;version=Hapmap2;RS=rs814597901;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	43757984	43758083	.	+	.	Name=Days_to_silk;B73v2_pos=3:43855386;1allele=A/C;version=Hapmap2;RS=rs1060847782;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	43759725	43759824	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:43857127;1allele=T/C;version=Hapmap2;RS=rs816040882;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	43771955	43772054	.	+	.	Name=Days_to_silk;B73v2_pos=3:43869357;1allele=C/G;version=Hapmap2;RS=rs129446728;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	43896152	43896251	.	+	.	Name=Days_to_silk;B73v2_pos=3:43992461;1allele=A/G;version=Hapmap2;RS=rs277020041;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	44409086	44409185	.	+	.	Name=Days_to_silk;B73v2_pos=3:44428194;1allele=T/C;version=Hapmap2;RS=rs820000533;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	44771526	44771625	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:44819498;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	45093091	45093190	.	+	.	Name=Height_above_ear;B73v2_pos=3:45124123;1allele=C/G;version=Hapmap2;RS=rs277021594;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	45101203	45101302	.	+	.	Name=Height_above_ear;B73v2_pos=3:45132235;1allele=C/A;version=Hapmap2;RS=rs1061750753;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	45111705	45111804	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:45142737;1allele=G/A;version=Hapmap2;RS=rs831122629;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	45119191	45119290	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:45150223;1allele=G/C;version=Hapmap2;RS=rs1063185330;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	45120720	45120819	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:45151752;1allele=G/A;version=Hapmap2;RS=rs808987609;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	45121231	45121330	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:45152263;1allele=C/A;version=Hapmap2;RS=rs806069865;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	45121854	45121953	.	+	.	Name=Days_to_silk;B73v2_pos=3:45152886;1allele=+/-;version=Hapmap2;RS=rs1060785919;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	45140040	45140139	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:45171074;1allele=G/A;version=Hapmap2;RS=rs824094014;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	45141689	45141788	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:45172723;1allele=A/C;version=Hapmap2;RS=rs1062264601;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	45172600	45172699	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:45201167;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	45176798	45176897	.	+	.	Name=Height_above_ear;B73v2_pos=3:45205365;1allele=C/T;version=Hapmap2;RS=rs822522159;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	45194455	45194554	.	+	.	Name=Cob_diameter;B73v2_pos=3:45223020;1allele=G/T;version=Hapmap2;RS=rs727376296;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	45195330	45195429	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:45223895;1allele=C/T;version=Hapmap2;RS=rs809111776;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	45209566	45209665	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:45238133;1allele=G/T;version=Hapmap2;RS=rs810534467;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	45209715	45209814	.	+	.	Name=Ear_height;B73v2_pos=3:45238282;1allele=A/C;version=Hapmap2;RS=rs129556631;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	45617064	45617163	.	+	.	Name=Plant_height;B73v2_pos=3:45633955;1allele=C/G;version=Hapmap2;RS=rs129307747;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	45649139	45649238	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:45664010;1allele=G/A;version=Hapmap1;RS=rs131403991;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	45716748	45716847	.	+	.	Name=Leaf_width;B73v2_pos=3:45731626;1allele=T/C;version=Hapmap2;RS=rs277022360;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	45777238	45777337	.	+	.	Name=Leaf_width;B73v2_pos=3:45793137;1allele=T/C;version=Hapmap2;RS=rs129374654;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	45889453	45889552	.	+	.	Name=Leaf_width;B73v2_pos=3:45896124;1allele=T/C;version=Hapmap2;RS=rs129387535;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	46130611	46130710	.	+	.	Name=Leaf_width;B73v2_pos=3:46136944;1allele=C/T;version=Hapmap2;RS=rs725065288;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	46159689	46159788	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:46166023;1allele=G/A;version=Hapmap2;RS=rs804586292;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	46170730	46170829	.	+	.	Name=Leaf_width;B73v2_pos=3:46177066;1allele=G/C;version=Hapmap1;RS=rs277023543;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	46177570	46177669	.	+	.	Name=Cob_diameter;B73v2_pos=3:46183906;1allele=G/A;version=Hapmap2;RS=rs819304973;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	46218418	46218517	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:46224752;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	46396369	46396468	.	+	.	Name=Ear_row_number;B73v2_pos=3:46374900;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	46714957	46715056	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:46690999;1allele=C/G;version=Hapmap2;RS=rs848019532;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	46721133	46721232	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:46697175;1allele=G/A;version=Hapmap2;RS=rs804997020;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	46724968	46725067	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:46701010;1allele=C/T;version=Hapmap2;RS=rs809130955;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	46977277	46977376	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:46940559;1allele=G/C;version=Hapmap2;RS=rs824536524;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	46977277	46977376	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:46940559;1allele=G/C;version=Hapmap2;RS=rs824536524;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	47736875	47736974	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:47323114;1allele=C/T;version=Hapmap2;RS=rs277025544;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	47744466	47744565	.	+	.	Name=Cob_diameter;B73v2_pos=3:47330705;1allele=C/T;version=Hapmap2;RS=rs827933367;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	47745008	47745107	.	+	.	Name=Cob_diameter;B73v2_pos=3:47331247;1allele=A/C;version=Hapmap2;RS=rs129569016;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	47753414	47753513	.	+	.	Name=Cob_diameter;B73v2_pos=3:47339653;1allele=C/T;version=Hapmap2;RS=rs277025609;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	47754380	47754479	.	+	.	Name=Cob_diameter;B73v2_pos=3:47340619;1allele=C/A;version=Hapmap2;RS=rs809699591;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	48201470	48201569	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:47782049;1allele=T/A;version=Hapmap2;RS=rs277027368;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	48452228	48452327	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:48042570;1allele=T/C;version=Hapmap2;RS=rs131404865;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	48487148	48487247	.	+	.	Name=Starch;B73v2_pos=3:48076894;1allele=A/C;version=Hapmap2;RS=rs846312241;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	48766636	48766735	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:48301183;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	48773686	48773785	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:48294004;1allele=A/G;version=Hapmap2;RS=rs817618029;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	48796116	48796215	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:48386624;1allele=G/A;version=Hapmap2;RS=rs837031602;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	48796118	48796217	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:48386626;1allele=A/G;version=Hapmap2;RS=rs848056968;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	48820207	48820306	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:48392415;1allele=G/A;version=Hapmap2;RS=rs835216640;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	48840099	48840198	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:48412307;1allele=G/T;version=Hapmap2;RS=rs277028506;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	48919751	48919850	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:48490232;1allele=G/C;version=Hapmap2;RS=rs846795427;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	48925298	48925397	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:48495779;1allele=G/C;version=Hapmap2;RS=rs802179213;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	48925298	48925397	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:48495779;1allele=G/C;version=Hapmap2;RS=rs802179213;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	48980761	48980860	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:48550969;1allele=G/T;version=Hapmap2;RS=rs836064220;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	49086304	49086403	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:48655854;1allele=A/C;version=Hapmap2;RS=rs808979963;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	49087825	49087924	.	+	.	Name=Height_above_ear;B73v2_pos=3:48657375;1allele=C/G;version=Hapmap2;RS=rs819530986;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	49146511	49146610	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:48739869;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	49159496	49159595	.	+	.	Name=Leaf_width;B73v2_pos=3:48727378;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	49172784	49172883	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:48714090;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	49182724	49182823	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:48704139;1allele=TG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	49182724	49182823	.	+	.	Name=Days_to_silk;B73v2_pos=3:48704139;1allele=TG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	49182762	49182861	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:48704101;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	49224001	49224100	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:48793461;1allele=T/A;version=Hapmap1;RS=rs131405185;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	49225503	49225602	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:48794963;1allele=G/A;version=Hapmap2;RS=rs277029109;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	49229388	49229487	.	+	.	Name=Days_to_silk;B73v2_pos=3:48798848;1allele=C/T;version=Hapmap2;RS=rs129570179;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	49364227	49364326	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:48932763;1allele=C/T;version=Hapmap2;RS=rs803329995;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	49390151	49390250	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:48959037;1allele=T/C;version=Hapmap2;RS=rs844171267;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	49392049	49392148	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:48960935;1allele=-/+;version=Hapmap2;RS=rs829705755;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	49410494	49410593	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:48979462;1allele=T/C;version=Hapmap2;RS=rs129450561;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	49416396	49416495	.	+	.	Name=Ear_height;B73v2_pos=3:48985363;1allele=A/G;version=Hapmap2;RS=rs812104805;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	49435359	49435458	.	+	.	Name=Starch;B73v2_pos=3:49004249;1allele=G/A;version=Hapmap2;RS=rs830867079;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	49548043	49548142	.	+	.	Name=Starch;B73v2_pos=3:49105544;1allele=A/G;version=Hapmap2;RS=rs815944130;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	49577710	49577809	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:49146033;1allele=G/A;version=Hapmap2;RS=rs827297713;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	49609047	49609146	.	+	.	Name=Starch;B73v2_pos=3:49177370;1allele=G/A;version=Hapmap2;RS=rs808816435;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	49665007	49665106	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:49232937;1allele=T/A;version=Hapmap2;RS=rs277030063;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	49958552	49958651	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:49556141;1allele=A/G;version=Hapmap2;RS=rs835867512;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	49966947	49967046	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:49564541;1allele=G/C;version=Hapmap1;RS=rs129589688;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	50372428	50372527	.	+	.	Name=Stalk_strength;B73v2_pos=3:49950065;1allele=C/T;version=Hapmap2;RS=rs815127090;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50563390	50563489	.	+	.	Name=Glucose;B73v2_pos=3:50138160;1allele=C/T;version=Hapmap2;RS=rs828232041;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50564094	50564193	.	+	.	Name=Glucose;B73v2_pos=3:50138864;1allele=C/T;version=Hapmap2;RS=rs277031349;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50630204	50630303	.	+	.	Name=Glucose;B73v2_pos=3:50205702;1allele=G/A;version=Hapmap2;RS=rs845427838;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	50632956	50633055	.	+	.	Name=Glucose;B73v2_pos=3:50208454;1allele=C/T;version=Hapmap1;RS=rs131406164;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50637142	50637241	.	+	.	Name=Glucose;B73v2_pos=3:50212640;1allele=A/G;version=Hapmap2;RS=rs1063132245;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	50649612	50649711	.	+	.	Name=Tassel_length;B73v2_pos=3:50225114;1allele=C/T;version=Hapmap2;RS=rs129558925;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50671824	50671923	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:50247323;1allele=A/G;version=Hapmap2;RS=rs833696442;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	50687737	50687836	.	+	.	Name=Leaf_width;B73v2_pos=3:50263236;1allele=G/A;version=Hapmap2;RS=rs811322431;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	50690098	50690197	.	+	.	Name=Fructose;B73v2_pos=3:50265597;1allele=A/C;version=Hapmap2;RS=rs129343108;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	50691325	50691424	.	+	.	Name=Fructose;B73v2_pos=3:50266824;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	50768233	50768332	.	+	.	Name=Fructose;B73v2_pos=3:50343738;1allele=C/G;version=Hapmap2;RS=rs828167040;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	50780592	50780691	.	+	.	Name=Glucose;B73v2_pos=3:50356099;1allele=C/A;version=Hapmap2;RS=rs727179800;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	50783586	50783685	.	+	.	Name=Fructose;B73v2_pos=3:50359093;1allele=G/A;version=Hapmap2;RS=rs849172876;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	50790790	50790889	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:50366295;1allele=C/T;version=Hapmap2;RS=rs129279515;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50793011	50793110	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:50368516;1allele=C/T;version=Hapmap2;RS=rs129383955;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50876583	50876682	.	+	.	Name=Cob_diameter;B73v2_pos=3:50476126;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	50880305	50880404	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:50472404;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	50973741	50973840	.	+	.	Name=Leaf_width;B73v2_pos=3:50539599;1allele=C/G;version=Hapmap2;RS=rs1060792700;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	50995501	50995600	.	+	.	Name=Cob_diameter;B73v2_pos=3:50561268;1allele=C/T;version=Hapmap2;RS=rs277032471;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	50995502	50995601	.	+	.	Name=Cob_diameter;B73v2_pos=3:50561269;1allele=G/A;version=Hapmap2;RS=rs844194787;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	51031285	51031384	.	+	.	Name=Plant_height;B73v2_pos=3:50660200;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	51506424	51506522	.	+	.	Name=Starch;B73v2_pos=3:51059795;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	51792779	51792878	.	+	.	Name=Starch;B73v2_pos=3:51326782;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	51812887	51812986	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:51346971;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	51898454	51898553	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:51436499;1allele=A/C;version=Hapmap2;RS=rs819806812;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	52746516	52746615	.	+	.	Name=Fructose;B73v2_pos=3:52241222;1allele=T/A;version=Hapmap2;RS=rs815207433;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	52749442	52749541	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:52244148;1allele=T/C;version=Hapmap2;RS=rs809113250;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	52822461	52822560	.	+	.	Name=Malate;B73v2_pos=3:52329231;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	52992120	52992219	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:52495686;1allele=G/A;version=Hapmap2;RS=rs803015411;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	53860128	53860227	.	+	.	Name=Days_to_silk;B73v2_pos=3:53367247;1allele=A/G;version=Hapmap2;RS=rs129496354;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	53993941	53994040	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:53485386;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	54014924	54015023	.	+	.	Name=Ear_height;B73v2_pos=3:53533279;1allele=T/C;version=Hapmap2;RS=rs810034550;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	54084843	54084942	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:53603201;1allele=A/G;version=Hapmap2;RS=rs129427818;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	54272350	54272449	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:53784114;1allele=T/C;version=Hapmap2;RS=rs844345641;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	54356875	54356974	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:53871116;1allele=G/A;version=Hapmap2;RS=rs727081130;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	54414837	54414936	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:53929080;1allele=T/C;version=Hapmap2;RS=rs807255456;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	54427185	54427284	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:53941430;1allele=G/T;version=Hapmap2;RS=rs846101386;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	54427185	54427284	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:53941430;1allele=G/T;version=Hapmap2;RS=rs846101386;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	54429952	54430051	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:53944197;1allele=A/G;version=Hapmap2;RS=rs724847634;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	54435735	54435834	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:53949980;1allele=G/A;version=Hapmap2;RS=rs844504560;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	54435735	54435834	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:53949980;1allele=G/A;version=Hapmap2;RS=rs844504560;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	54475233	54475332	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:53988883;1allele=C/T;version=Hapmap2;RS=rs832310716;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	54475233	54475332	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:53988883;1allele=C/T;version=Hapmap2;RS=rs832310716;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	54502463	54502562	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:54024336;1allele=G/A;version=Hapmap2;RS=rs848232489;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	54515115	54515214	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:54030467;1allele=A/C;version=Hapmap2;RS=rs830400203;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	54544232	54544331	.	+	.	Name=Tassel_length;B73v2_pos=3:54059584;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	54602615	54602714	.	+	.	Name=Days_to_silk;B73v2_pos=3:54117969;1allele=C/T;version=Hapmap2;RS=rs131408061;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	54618990	54619089	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:54142272;1allele=A/G;version=Hapmap2;RS=rs131408113;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	54919358	54919456	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:54427632;1allele=C/T;version=Hapmap2;RS=rs725025105;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	55390376	55390475	.	+	.	Name=Plant_height;B73v2_pos=3:54872143;1allele=A/C;version=Hapmap2;RS=rs812702648;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	55449303	55449402	.	+	.	Name=Starch;B73v2_pos=3:54945217;1allele=T/G;version=Hapmap2;RS=rs804408841;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	55449303	55449402	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:54945217;1allele=T/G;version=Hapmap2;RS=rs804408841;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	55502178	55502277	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:54994399;1allele=C/T;version=Hapmap2;RS=rs129554498;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	55542746	55542845	.	+	.	Name=Cob_diameter;B73v2_pos=3:55035177;1allele=A/T;version=Hapmap2;RS=rs826584581;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	55543302	55543401	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:55035733;1allele=C/T;version=Hapmap2;RS=rs827426690;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	55613521	55613620	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:55105885;1allele=G/T;version=Hapmap2;RS=rs277038748;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	55617278	55617377	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:55109642;1allele=A/G;version=Hapmap2;RS=rs807497099;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	55629126	55629225	.	+	.	Name=Ear_row_number;B73v2_pos=3:55121490;1allele=A/G;version=Hapmap2;RS=rs835662579;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	55666771	55666870	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:55159139;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	55672830	55672929	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:55165198;1allele=T/C;version=Hapmap2;RS=rs803086982;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	55842527	55842626	.	+	.	Name=Cob_diameter;B73v2_pos=3:55335092;1allele=G/A;version=Hapmap2;RS=rs1060799313;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	55972308	55972407	.	+	.	Name=Leaf_length;B73v2_pos=3:55465485;1allele=T/C;version=Hapmap2;RS=rs277040100;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	55993634	55993733	.	+	.	Name=Plant_height;B73v2_pos=3:55486737;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	55993634	55993733	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:55486737;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	56002869	56002968	.	+	.	Name=Fructose;B73v2_pos=3:55495972;1allele=C/T;version=Hapmap2;RS=rs839541535;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	56132900	56132999	.	+	.	Name=Ear_row_number;B73v2_pos=3:55628813;1allele=C/T;version=Hapmap2;RS=rs1062544144;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	56193756	56193855	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:55688417;1allele=T/C;version=Hapmap2;RS=rs816179900;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	56329037	56329136	.	+	.	Name=Plant_height;B73v2_pos=3:55815883;1allele=G/A;version=Hapmap2;RS=rs1061725429;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	56365923	56366022	.	+	.	Name=Ear_row_number;B73v2_pos=3:55851707;1allele=A/T;version=Hapmap2;RS=rs839767970;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	56379823	56379922	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165037851;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	56387828	56387927	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:55873568;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	56564862	56564961	.	+	.	Name=Plant_height;B73v2_pos=3:56043003;1allele=C/G;version=Hapmap2;RS=rs277042274;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	56564862	56564961	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:56043003;1allele=C/G;version=Hapmap2;RS=rs277042274;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	56944652	56944751	.	+	.	Name=Leaf_length;B73v2_pos=3:56414359;1allele=C/A;version=Hapmap2;RS=rs815841192;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	57336355	57336454	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:56813054;1allele=/AG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	57454619	57454718	.	+	.	Name=Plant_height;B73v2_pos=3:56929614;1allele=G/A;version=Hapmap2;RS=rs1060909909;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	57594025	57594124	.	+	.	Name=Ear_height;B73v2_pos=3:57062759;1allele=A/G;version=Hapmap2;RS=rs810960072;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	57613361	57613460	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:57082361;1allele=C/T;version=Hapmap2;RS=rs846994560;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	57613505	57613604	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:57082505;1allele=G/A;version=Hapmap2;RS=rs846167335;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	57933647	57933746	.	+	.	Name=Ear_row_number;B73v2_pos=3:57399228;1allele=T/G;version=Hapmap2;RS=rs808359113;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	57964163	57964262	.	+	.	Name=Ear_row_number;B73v2_pos=3:57435542;1allele=G/C;version=Hapmap2;RS=rs817574793;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	58075027	58075126	.	+	.	Name=Days_to_silk;B73v2_pos=3:57544959;1allele=A/T;version=Hapmap2;RS=rs129462408;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	58135730	58135829	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:57605664;1allele=A/G;version=Hapmap2;RS=rs129340321;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	58693574	58693673	.	+	.	Name=Ear_height;B73v2_pos=3:58161133;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	58699045	58699144	.	+	.	Name=Ear_height;B73v2_pos=3:58155662;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	58774573	58774672	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:58254590;1allele=G/A;version=Hapmap2;RS=rs277045322;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	58826859	58826958	.	+	.	Name=Plant_height;B73v2_pos=3:58301683;1allele=C/T;version=Hapmap1;RS=rs131410230;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	59008011	59008110	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:58483735;1allele=A/G;version=Hapmap2;RS=rs277045960;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	59008280	59008379	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:58484004;1allele=C/G;version=Hapmap2;RS=rs129531527;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	59393552	59393651	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:58860947;1allele=A/G;version=Hapmap2;RS=rs805544741;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	59419152	59419251	.	+	.	Name=Ear_height;B73v2_pos=3:58886337;1allele=A/C;version=Hapmap2;RS=rs829490347;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	59426253	59426352	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:58893440;1allele=A/C;version=Hapmap2;RS=rs803546934;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	59478099	59478198	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:58935915;1allele=A/T;version=Hapmap2;RS=rs813694514;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	59751034	59751133	.	+	.	Name=Ear_height;B73v2_pos=3:59198683;1allele=A/G;version=Hapmap2;RS=rs1060751793;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	59755728	59755827	.	+	.	Name=Ear_height;B73v2_pos=3:59203383;1allele=A/G;version=Hapmap2;RS=rs1060783093;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	59784352	59784451	.	+	.	Name=Ear_height;B73v2_pos=3:59228372;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	59865325	59865424	.	+	.	Name=Days_to_silk;B73v2_pos=3:59306191;1allele=G/A;version=Hapmap2;RS=rs129369734;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	59866094	59866193	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:59306960;1allele=T/A;version=Hapmap2;RS=rs129583104;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	59881859	59881958	.	+	.	Name=Days_to_silk;B73v2_pos=3:59322730;1allele=T/G;version=Hapmap2;RS=rs807255967;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	60062481	60062580	.	+	.	Name=Ear_row_number;B73v2_pos=3:59506531;1allele=T/C;version=Hapmap2;RS=rs277047687;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	60521012	60521111	.	+	.	Name=Leaf_length;B73v2_pos=3:59960902;1allele=A/G;version=Hapmap2;RS=rs814850454;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	60811366	60811465	.	+	.	Name=Leaf_length;B73v2_pos=3:60253192;1allele=T/G;version=Hapmap2;RS=rs131411241;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	60866909	60867008	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:60308652;1allele=G/T;version=Hapmap2;RS=rs805024485;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	61007066	61007165	.	+	.	Name=Plant_height;B73v2_pos=3:60444616;1allele=C/T;version=Hapmap2;RS=rs726750670;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	61085856	61085955	.	+	.	Name=Plant_height;B73v2_pos=3:60524228;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	61086030	61086129	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:60524402;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	61091484	61091583	.	+	.	Name=Days_to_silk;B73v2_pos=3:60529856;1allele=A/T;version=Hapmap2;RS=rs277049830;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	61092455	61092554	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:60530827;1allele=T/A;version=Hapmap2;RS=rs277049840;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	61093619	61093718	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:60531991;1allele=A/C;version=Hapmap2;RS=rs802269330;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	64002249	64002348	.	+	.	Name=Ear_height;B73v2_pos=3:63426058;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	64293788	64293887	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:63727810;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	65205195	65205294	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:64581415;1allele=T/G;version=Hapmap2;RS=rs277056124;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	65330137	65330236	.	+	.	Name=Days_to_silk;B73v2_pos=3:64755228;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	65342732	65342831	.	+	.	Name=Days_to_silk;B73v2_pos=3:64692724;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	65425800	65425899	.	+	.	Name=Days_to_silk;B73v2_pos=3:64806587;1allele=T/C;version=Hapmap2;RS=rs1063356596;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	65759275	65759374	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:65138211;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	65937628	65937727	.	+	.	Name=Cob_diameter;B73v2_pos=3:65315825;1allele=G/A;version=Hapmap2;RS=rs843265580;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	66247107	66247206	.	+	.	Name=Cob_diameter;B73v2_pos=3:65617320;1allele=A/G;version=Hapmap2;RS=rs823512363;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	66330295	66330394	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:65718110;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	66330303	66330402	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:65718102;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	66331334	66331433	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:65717071;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	66349191	66349290	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:65665019;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	67015941	67016040	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:66330500;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	67052164	67052263	.	+	.	Name=Height_above_ear;B73v2_pos=3:66367274;1allele=G/A;version=Hapmap2;RS=rs1062730223;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	67416903	67417002	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:66737269;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	67578449	67578548	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:66892087;1allele=A/C;version=Hapmap2;RS=rs129530272;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	67874773	67874872	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:67180921;1allele=G/A;version=Hapmap2;RS=rs129612876;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	68295359	68295458	.	+	.	Name=Height_above_ear;B73v2_pos=3:67516153;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	68352097	68352196	.	+	.	Name=Height_above_ear;B73v2_pos=3:67666013;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	68352109	68352208	.	+	.	Name=Height_above_ear;B73v2_pos=3:67666025;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	68540094	68540193	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:67849027;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	68577311	68577410	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:67886032;1allele=G/A;version=Hapmap2;RS=rs824355275;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	68683451	68683550	.	+	.	Name=Days_to_silk;B73v2_pos=3:67991299;1allele=T/C;version=Hapmap2;RS=rs727386698;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	68761336	68761435	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:68063407;1allele=A/G;version=Hapmap2;RS=rs727249409;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	69197639	69197738	.	+	.	Name=Days_to_silk;B73v2_pos=3:68456561;1allele=C/T;version=Hapmap2;RS=rs1062578194;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	69308962	69309061	.	+	.	Name=Days_to_silk;B73v2_pos=3:68597724;1allele=T/C;version=Hapmap2;RS=rs129338684;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	69429667	69429766	.	+	.	Name=Days_to_silk;B73v2_pos=3:68719115;1allele=T/A;version=Hapmap2;RS=rs806713119;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	69472808	69472907	.	+	.	Name=Days_to_silk;B73v2_pos=3:68762143;1allele=A/G;version=Hapmap2;RS=rs1061520318;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	69495364	69495463	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:68784710;1allele=G/A;version=Hapmap2;RS=rs129386292;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	69565691	69565790	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:68855350;1allele=A/G;version=Hapmap2;RS=rs843822125;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	69645463	69645562	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:68935124;1allele=G/T;version=Hapmap2;RS=rs1061679439;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	69756887	69756986	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:69041267;1allele=T/C;version=Hapmap2;RS=rs277067086;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	70380534	70380633	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:69653747;1allele=G/A;version=Hapmap2;RS=rs277068139;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	70541671	70541770	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:69808475;1allele=T/C;version=Hapmap2;RS=rs825511990;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	70600721	70600820	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214517824;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	71085603	71085702	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:70421971;1allele=G/A;version=Hapmap2;RS=rs836157617;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	82833550	82833649	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:82144006;1allele=A/G;version=Hapmap1;RS=rs131416309;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	84496781	84496880	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:184757867;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	87997750	87997849	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:100684362;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	91749008	91749107	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:104513374;1allele=T/C;version=Hapmap2;RS=rs1060594121;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	91959964	91960063	.	+	.	Name=Glucose;B73v2_pos=3:104753705;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	93198644	93198743	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:105971533;1allele=A/C;version=Hapmap2;RS=rs129604947;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	93664451	93664550	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:106419258;1allele=C/T;version=Hapmap2;RS=rs724986325;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	94673210	94673309	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:107390919;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	94673210	94673309	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:107390919;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	94725200	94725298	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:107500286;1allele=C/T;version=Hapmap2;RS=rs129445619;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	94729621	94729720	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:107504709;1allele=G/A;version=Hapmap2;RS=rs811013896;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	94825484	94825583	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:107595076;1allele=G/A;version=Hapmap2;RS=rs837851759;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	94861010	94861109	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:107630620;1allele=C/T;version=Hapmap2;RS=rs820291922;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	94979772	94979871	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:107814415;1allele=G/A;version=Hapmap2;RS=rs819939744;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	95038232	95038331	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:107885210;1allele=C/G;version=Hapmap2;RS=rs804868369;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	95917532	95917631	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:108749835;1allele=T/C;version=Hapmap2;RS=rs1063033616;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	96580902	96581001	.	+	.	Name=Ear_height;B73v2_pos=3:109411648;1allele=T/C;version=Hapmap2;RS=rs129558245;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	96776612	96776711	.	+	.	Name=Ear_height;B73v2_pos=3:109614928;1allele=A/G;version=Hapmap2;RS=rs820693750;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	97567697	97567796	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:110420994;1allele=T/C;version=Hapmap2;RS=rs129577005;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	97570282	97570381	.	+	.	Name=Tassel_length;B73v2_pos=3:110423579;1allele=C/T;version=Hapmap2;RS=rs129614354;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	97610428	97610528	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:110456914;1allele=A/G;version=Hapmap2;RS=rs822244354;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	97629336	97629435	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:110475824;1allele=C/A;version=Hapmap2;RS=rs277121392;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	97633969	97634068	.	+	.	Name=Malate;B73v2_pos=3:110480457;1allele=T/C;version=Hapmap2;RS=rs129399645;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	97685412	97685511	.	+	.	Name=Ear_height;B73v2_pos=3:110532476;1allele=T/C;version=Hapmap2;RS=rs1061108969;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	97689177	97689276	.	+	.	Name=Ear_height;B73v2_pos=3:110536242;1allele=A/G;version=Hapmap2;RS=rs129280448;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	97720929	97721028	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:110567931;1allele=G/A;version=Hapmap2;RS=rs831098039;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	97760636	97760735	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:110607331;1allele=A/G;version=Hapmap2;RS=rs277121875;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	97760636	97760735	.	+	.	Name=Malate;B73v2_pos=3:110607331;1allele=A/G;version=Hapmap2;RS=rs277121875;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	97790103	97790202	.	+	.	Name=Ear_height;B73v2_pos=3:110638611;1allele=T/C;version=Hapmap2;RS=rs834042119;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	97863344	97863443	.	+	.	Name=Leaf_width;B73v2_pos=3:110653219;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	97909706	97909805	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:110807634;1allele=C/T;version=Hapmap2;RS=rs277122405;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	98563505	98563604	.	+	.	Name=Plant_height;B73v2_pos=3:111385201;1allele=G/A;version=Hapmap2;RS=rs131416858;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	98618716	98618815	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:111439238;1allele=T/C;version=Hapmap2;RS=rs844640783;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	98994283	98994382	.	+	.	Name=Height_above_ear;B73v2_pos=3:111821922;1allele=A/G;version=Hapmap2;RS=rs832126550;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	99151774	99151873	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:111977735;1allele=T/G;version=Hapmap2;RS=rs842587028;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	99331809	99331908	.	+	.	Name=Plant_height;B73v2_pos=3:112157171;1allele=C/T;version=Hapmap2;RS=rs810395477;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	99378408	99378508	.	+	.	Name=Plant_height;B73v2_pos=3:112204499;1allele=G/A;version=Hapmap2;RS=rs817605124;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	99384394	99384493	.	+	.	Name=Plant_height;B73v2_pos=3:112210490;1allele=T/C;version=Hapmap2;RS=rs848173894;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	99612171	99612270	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:112430200;1allele=T/C;version=Hapmap2;RS=rs845630356;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	99690777	99690876	.	+	.	Name=Tassel_length;B73v2_pos=3:112498679;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	100118898	100118997	.	+	.	Name=Ear_height;B73v2_pos=3:112932584;1allele=C/G;version=Hapmap2;RS=rs821920677;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	100204728	100204827	.	+	.	Name=Ear_height;B73v2_pos=3:113016676;1allele=A/G;version=Hapmap2;RS=rs129329922;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	100817548	100817647	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:99443362;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	101233285	101233384	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:99000379;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	101558171	101558270	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:98684714;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	101614628	101614727	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:98630628;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102105124	102105223	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:98159009;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102226283	102226382	.	+	.	Name=Plant_height;B73v2_pos=3:98036514;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102503485	102503584	.	+	.	Name=Days_to_silk;B73v2_pos=3:97748324;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102562468	102562567	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:97698180;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102562484	102562583	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:97698164;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102720370	102720469	.	+	.	Name=Ear_height;B73v2_pos=3:97538827;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102755791	102755890	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:97503402;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102878116	102878215	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:97377957;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102948444	102948543	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:97307633;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	102996268	102996367	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:97259804;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	103387298	103387397	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:108660136;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	103387298	103387397	.	+	.	Name=Plant_height;B73v2_pos=2:108660136;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	104033929	104034028	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:96220366;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	104587266	104587365	.	+	.	Name=Days_to_silk;B73v2_pos=3:95757967;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	106592503	106592602	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:93743422;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	106879215	106879314	.	+	.	Name=Fructose;B73v2_pos=3:93412298;1allele=A/G;version=Hapmap2;RS=rs848398027;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	106936549	106936648	.	+	.	Name=Fructose;B73v2_pos=3:93354118;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107106951	107107050	.	+	.	Name=Days_to_silk;B73v2_pos=3:93194077;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107114603	107114702	.	+	.	Name=Fructose;B73v2_pos=3:93186422;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107214798	107214897	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:93103009;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107226439	107226538	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:93090815;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107310627	107310726	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:92991412;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107425292	107425391	.	+	.	Name=Days_to_silk;B73v2_pos=3:92881310;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107667744	107667843	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:92650261;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	107825377	107825476	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:92448865;1allele=T/C;version=Hapmap1;RS=rs724447727;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	107977446	107977545	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:92352208;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108354663	108354762	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:91975756;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108392288	108392387	.	+	.	Name=Cob_diameter;B73v2_pos=3:91939063;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108394703	108394802	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:91936648;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108429740	108429839	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:91901501;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108532944	108533043	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:91798296;1allele=G/A;version=Hapmap2;RS=rs803847685;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	108563329	108563428	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:91751172;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108605355	108605454	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:91712070;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108623360	108623459	.	+	.	Name=Cob_diameter;B73v2_pos=3:91694065;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108892549	108892648	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:91427056;1allele=C/T;version=Hapmap2;RS=rs829241914;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	108892925	108893024	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:91427432;1allele=T/G;version=Hapmap2;RS=rs129335715;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	108901312	108901411	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:91435819;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	108996213	108996312	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:91332179;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	109037600	109037699	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:91290789;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	109282431	109282530	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:91053823;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	109360163	109360262	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:90976460;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	109455380	109455479	.	+	.	Name=Days_to_silk;B73v2_pos=3:90941806;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	109455730	109455829	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:90941456;1allele=G/A;version=Hapmap2;RS=rs818048895;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	109470847	109470946	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:90926340;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	109585732	109585831	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:90752705;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	109793509	109793608	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:90550715;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110225783	110225882	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:90097173;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110294312	110294411	.	+	.	Name=Height_above_ear;B73v2_pos=3:90028707;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110304449	110304548	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:90018573;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110344254	110344353	.	+	.	Name=Days_to_silk;B73v2_pos=3:89978515;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110376149	110376248	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:89946718;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110444701	110444799	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:89879136;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110445604	110445703	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:89878231;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110536562	110536661	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:89790526;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110544754	110544853	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:89782340;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110695001	110695100	.	+	.	Name=Leaf_width;B73v2_pos=3:127208485;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110732778	110732877	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:89665980;1allele=A/G;version=Hapmap2;RS=rs811596850;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	110743834	110743933	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:89588930;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110879351	110879450	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:89452029;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	110913796	110913895	.	+	.	Name=Days_to_silk;B73v2_pos=3:89417962;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	111335989	111336088	.	+	.	Name=Protein;B73v2_pos=3:89008236;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	111453235	111453334	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:88896795;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	111468530	111468629	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:88881500;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	111558457	111558556	.	+	.	Name=Malate;B73v2_pos=3:88792190;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	112053067	112053166	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:88267370;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	112328159	112328258	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:88008098;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	112445501	112445600	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:87890181;1allele=G/A;version=Hapmap2;RS=rs819543815;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	112560150	112560249	.	+	.	Name=Height_above_ear;B73v2_pos=3:87775661;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	112927056	112927155	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:87417495;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	113410941	113411040	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:86958175;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	113446018	113446117	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:86922987;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	113496024	113496123	.	+	.	Name=Days_to_silk;B73v2_pos=3:86873340;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	113525458	113525557	.	+	.	Name=Cob_diameter;B73v2_pos=3:86843904;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	114611474	114611573	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:85777387;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	114753242	114753341	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:85704471;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	114803547	114803646	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:113327462;1allele=G/C;version=Hapmap2;RS=rs808071258;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	114822451	114822550	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:113346067;1allele=A/T;version=Hapmap2;RS=rs277127233;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	115090441	115090540	.	+	.	Name=Plant_height;B73v2_pos=3:113563668;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	115120012	115120111	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:113611334;1allele=T/C;version=Hapmap2;RS=rs129561141;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	115715569	115715668	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:114261189;1allele=A/G;version=Hapmap2;RS=rs831838963;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	115769641	115769740	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:114313118;1allele=G/C;version=Hapmap2;RS=rs835348509;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	115806129	115806228	.	+	.	Name=Days_to_silk;B73v2_pos=3:114349842;1allele=G/A;version=Hapmap2;RS=rs805365738;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	115810884	115810983	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:114354594;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	115883452	115883551	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:114430048;1allele=G/C;version=Hapmap2;RS=rs129526152;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	115884416	115884515	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:114431012;1allele=T/C;version=Hapmap2;RS=rs809682780;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	115887518	115887617	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:114434114;1allele=C/T;version=Hapmap2;RS=rs132021795;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	116211814	116211913	.	+	.	Name=Ear_height;B73v2_pos=3:114772812;1allele=T/C;version=Hapmap2;RS=rs824622714;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	116227185	116227284	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:114788181;1allele=G/A;version=Hapmap2;RS=rs830768652;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	116229529	116229628	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:114790525;1allele=C/A;version=Hapmap2;RS=rs132022019;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	116231111	116231210	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:114792107;1allele=C/T;version=Hapmap2;RS=rs824953339;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	116501210	116501309	.	+	.	Name=Ear_height;B73v2_pos=1:255397054;1allele=G/A;version=Hapmap2;RS=rs815303057;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	116783169	116783268	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:115340910;1allele=G/A;version=Hapmap2;RS=rs129263815;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	116823036	116823135	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:115394314;1allele=C/T;version=Hapmap2;RS=rs277130203;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	117142393	117142492	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:84951969;1allele=C/T;version=Hapmap2;RS=rs819215862;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	117235107	117235206	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:115811613;1allele=G/A;version=Hapmap2;RS=rs129456488;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	117403267	117403366	.	+	.	Name=Cob_diameter;B73v2_pos=3:116001461;1allele=C/T;version=Hapmap2;RS=rs277130891;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	117733153	117733252	.	+	.	Name=Ear_height;B73v2_pos=3:116325103;1allele=A/G;version=Hapmap2;RS=rs811079425;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	118250013	118250112	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:116851382;1allele=A/G;version=Hapmap2;RS=rs129440584;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	118253291	118253390	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:116854660;1allele=G/A;version=Hapmap2;RS=rs818179515;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	118306600	118306699	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:116900016;1allele=T/G;version=Hapmap2;RS=rs1063041079;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	118346933	118347032	.	+	.	Name=Ear_height;B73v2_pos=3:116941214;1allele=T/C;version=Hapmap2;RS=rs811740601;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	118488432	118488531	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:117083653;1allele=T/C;version=Hapmap2;RS=rs277132203;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	118679200	118679299	.	+	.	Name=Ear_height;B73v2_pos=3:117259255;1allele=A/T;version=Hapmap2;RS=rs804726167;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	119442353	119442452	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:118051178;1allele=T/C;version=Hapmap2;RS=rs836369094;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	119483567	119483666	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:118091905;1allele=C/T;version=Hapmap2;RS=rs847627165;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	119486182	119486281	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:118094520;1allele=G/A;version=Hapmap2;RS=rs805584129;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	119537470	119537569	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118142192;1allele=C/G;version=Hapmap2;RS=rs803863243;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	119570128	119570227	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:118174852;1allele=T/C;version=Hapmap2;RS=rs823554972;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	119637425	119637524	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:118227956;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	119688140	119688239	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:118285130;1allele=G/A;version=Hapmap1;RS=rs129551774;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	119710169	119710268	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118343400;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	119710175	119710274	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118343406;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	119803303	119803402	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118443897;1allele=T/A;version=Hapmap2;RS=rs277134115;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	119814801	119814900	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:118455265;1allele=A/G;version=Hapmap2;RS=rs841749559;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	119816653	119816752	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:118457117;1allele=C/T;version=Hapmap2;RS=rs833561657;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	119817302	119817401	.	+	.	Name=Cob_diameter;B73v2_pos=3:118457766;1allele=A/C;version=Hapmap2;RS=rs804609180;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	119818451	119818550	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:118458915;1allele=A/C;version=Hapmap2;RS=rs1061222666;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	119956787	119956886	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:118587198;1allele=T/C;version=Hapmap2;RS=rs129551919;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	120120065	120120164	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:118806624;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	120167390	120167489	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118758970;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	120242166	120242265	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118907261;1allele=G/A;version=Hapmap2;RS=rs835619651;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	120242950	120243049	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:118908045;1allele=G/A;version=Hapmap2;RS=rs277134800;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	120243218	120243317	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:118908313;1allele=T/A;version=Hapmap2;RS=rs809361683;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	120243779	120243878	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118908874;1allele=C/A;version=Hapmap2;RS=rs725957390;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	120244285	120244384	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118909380;1allele=C/G;version=Hapmap2;RS=rs727123102;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	120244285	120244384	.	+	.	Name=Height_above_ear;B73v2_pos=3:118909380;1allele=C/G;version=Hapmap2;RS=rs727123102;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	120244956	120245055	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:118910051;1allele=C/T;version=Hapmap2;RS=rs820628820;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	120245189	120245288	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118910284;1allele=A/T;version=Hapmap2;RS=rs819293614;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	120261267	120261366	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118926243;1allele=C/G;version=Hapmap2;RS=rs132023605;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	120261413	120261512	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:118926389;1allele=C/G;version=Hapmap2;RS=rs814932831;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	120484690	120484789	.	+	.	Name=Days_to_silk;B73v2_pos=3:119169901;1allele=A/G;version=Hapmap2;RS=rs822661204;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	120897899	120897998	.	+	.	Name=Days_to_silk;B73v2_pos=3:119606989;1allele=A/G;version=Hapmap2;RS=rs724558649;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	120897899	120897998	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:119606989;1allele=A/G;version=Hapmap2;RS=rs724558649;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	120905312	120905411	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:119614402;1allele=G/A;version=Hapmap2;RS=rs132023979;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	120913689	120913788	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:119622779;1allele=T/C;version=Hapmap2;RS=rs844542900;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	120939422	120939521	.	+	.	Name=Glucose;B73v2_pos=3:119648355;1allele=C/A;version=Hapmap2;RS=rs809941274;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	121020822	121020921	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:119729313;1allele=C/T;version=Hapmap2;RS=rs841781874;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	121027701	121027800	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:119736196;1allele=-/+;version=Hapmap2;RS=rs277136039;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	121172601	121172700	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:119884596;1allele=G/T;version=Hapmap2;RS=rs843236058;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	121173106	121173205	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:119885101;1allele=G/A;version=Hapmap2;RS=rs828762614;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	121174922	121175021	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:119886917;1allele=G/A;version=Hapmap2;RS=rs823199763;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	121269002	121269101	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:119964126;1allele=G/A;version=Hapmap2;RS=rs807660120;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	121269627	121269726	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:119964751;1allele=T/C;version=Hapmap2;RS=rs834785651;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	121269660	121269759	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:119964784;1allele=T/C;version=Hapmap2;RS=rs838253384;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	121270464	121270563	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:119965588;1allele=G/T;version=Hapmap2;RS=rs835686224;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	122085734	122085833	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:120786243;1allele=C/T;version=Hapmap2;RS=rs817571199;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	122586583	122586682	.	+	.	Name=Fructose;B73v2_pos=3:121238770;1allele=A/C;version=Hapmap2;RS=rs277139591;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	122650368	122650467	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:121302708;1allele=A/T;version=Hapmap2;RS=rs807756174;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	122797106	122797205	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:121437317;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	122986822	122986921	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:121624936;1allele=G/A;version=Hapmap2;RS=rs802794509;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	123059672	123059771	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:121697793;1allele=A/G;version=Hapmap2;RS=rs823231458;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	123100081	123100180	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:121731595;1allele=G/A;version=Hapmap2;RS=rs815322731;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	123346075	123346174	.	+	.	Name=Height_above_ear;B73v2_pos=3:121973318;1allele=A/G;version=Hapmap2;RS=rs826387411;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	123447150	123447249	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:122073555;1allele=C/T;version=Hapmap2;RS=rs835447087;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	123447872	123447971	.	+	.	Name=Days_to_silk;B73v2_pos=3:122074277;1allele=AGC/;version=Hapmap1;RS=rs132024969;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	123451310	123451409	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:122077715;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	123498140	123498239	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:122124556;1allele=G/A;version=Hapmap2;RS=rs815096563;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	123582427	123582526	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:122237254;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	123582430	123582529	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:122237257;1allele=G/A;version=Hapmap1;RS=rs132025143;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	123674609	123674708	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:122299791;1allele=G/A;version=Hapmap2;RS=rs804538429;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	123875173	123875272	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:122497931;1allele=A/C;version=Hapmap2;RS=rs129289223;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	123973136	123973235	.	+	.	Name=Days_to_silk;B73v2_pos=3:122595429;1allele=T/A;version=Hapmap2;RS=rs844942550;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	123973147	123973246	.	+	.	Name=Days_to_silk;B73v2_pos=3:122595440;1allele=T/G;version=Hapmap2;RS=rs835995006;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	123976382	123976481	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:122598675;1allele=C/T;version=Hapmap2;RS=rs822658234;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	123988558	123988657	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:122627287;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	123988558	123988657	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:122627287;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	124065914	124066013	.	+	.	Name=Days_to_silk;B73v2_pos=3:122689381;1allele=T/C;version=Hapmap2;RS=rs843477021;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	124066103	124066202	.	+	.	Name=Days_to_silk;B73v2_pos=3:122689570;1allele=T/A;version=Hapmap2;RS=rs277142421;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	124069067	124069166	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:122692534;1allele=C/T;version=Hapmap2;RS=rs847184443;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	124135875	124135974	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:122768371;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	124156617	124156716	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:122746778;1allele=C/T;version=Hapmap2;RS=rs805132362;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	124171882	124171981	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:122783110;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	124176810	124176909	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:122788038;1allele=C/T;version=Hapmap2;RS=rs824989160;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	124206936	124207035	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:122819659;1allele=A/T;version=Hapmap2;RS=rs129534257;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	124277531	124277630	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:122883861;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	124779742	124779841	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:123350300;1allele=A/G;version=Hapmap2;RS=rs805805380;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	124779796	124779895	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:123350354;1allele=C/T;version=Hapmap2;RS=rs838438896;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	125370019	125370118	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:123949200;1allele=+/-;version=Hapmap2;RS=rs832688515;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	125373578	125373677	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:123945641;1allele=C/T;version=Hapmap2;RS=rs814561962;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	125373593	125373692	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:123945626;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	125373593	125373692	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:123945626;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	126043346	126043445	.	+	.	Name=Ear_height;B73v2_pos=3:124595362;1allele=C/T;version=Hapmap2;RS=rs826706855;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	126045319	126045418	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:124597335;1allele=G/A;version=Hapmap2;RS=rs129301781;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	126046506	126046605	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:124598522;1allele=G/A;version=Hapmap2;RS=rs129486797;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	126395125	126395224	.	+	.	Name=Stalk_strength;B73v2_pos=3:124939631;1allele=C/T;version=Hapmap2;RS=rs809544664;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	126617970	126618069	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:125172562;1allele=G/C;version=Hapmap2;RS=rs837798598;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	126617970	126618069	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:125172562;1allele=G/C;version=Hapmap2;RS=rs837798598;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	126643662	126643761	.	+	.	Name=Days_to_silk;B73v2_pos=3:125190961;1allele=A/G;version=Hapmap2;RS=rs277147555;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	126644443	126644542	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:125191742;1allele=C/T;version=Hapmap2;RS=rs277147556;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	126644547	126644646	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:125191846;1allele=A/G;version=Hapmap2;RS=rs829424069;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	126644547	126644646	.	+	.	Name=Days_to_silk;B73v2_pos=3:125191846;1allele=A/G;version=Hapmap2;RS=rs829424069;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	126673815	126673914	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:125220214;1allele=G/A;version=Hapmap2;RS=rs129270319;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	127124606	127124705	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:125666724;1allele=A/G;version=Hapmap2;RS=rs277147957;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	127188757	127188856	.	+	.	Name=Height_above_ear;B73v2_pos=3:125730884;1allele=G/A;version=Hapmap2;RS=rs132026810;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	127211354	127211453	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:125749391;1allele=A/T;version=Hapmap2;RS=rs820851437;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	127528467	127528566	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:126073410;1allele=C/A;version=Hapmap2;RS=rs813693769;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	127559374	127559473	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:126103845;1allele=C/T;version=Hapmap2;RS=rs277148401;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	127559381	127559480	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:126103852;1allele=T/G;version=Hapmap2;RS=rs808580052;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	127563084	127563183	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:126107556;1allele=C/T;version=Hapmap2;RS=rs129594147;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	127574941	127575040	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:126140808;1allele=T/G;version=Hapmap2;RS=rs847003435;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	127576455	127576554	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:126139294;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	127614366	127614465	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:126151752;1allele=A/T;version=Hapmap2;RS=rs1062698695;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	127617640	127617739	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:126155026;1allele=T/A;version=Hapmap2;RS=rs277148540;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	127741876	127741975	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:126259441;1allele=C/T;version=Hapmap2;RS=rs840491895;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	128567855	128567954	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:127076232;1allele=G/C;version=Hapmap2;RS=rs838962833;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	128706956	128707055	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:127212746;1allele=A/G;version=Hapmap2;RS=rs129516851;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	128745835	128745934	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:127273943;1allele=A/G;version=Hapmap2;RS=rs726615753;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	128748728	128748827	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:127276836;1allele=A/G;version=Hapmap2;RS=rs815002578;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	128757929	128758028	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:127263421;1allele=T/C;version=Hapmap2;RS=rs802648848;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	128757929	128758028	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:127263421;1allele=T/C;version=Hapmap2;RS=rs802648848;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	128783606	128783705	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:127288336;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	128783849	128783948	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:127288579;1allele=A/G;version=Hapmap2;RS=rs277149771;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	128783849	128783948	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:127288579;1allele=A/G;version=Hapmap2;RS=rs277149771;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	128835309	128835408	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:127333266;1allele=T/G;version=Hapmap2;RS=rs827242837;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	128946079	128946178	.	+	.	Name=Stalk_strength;B73v2_pos=3:127440630;1allele=C/T;version=Hapmap2;RS=rs727295183;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	129041027	129041126	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:127513876;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	129046622	129046721	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:127561201;1allele=G/C;version=Hapmap2;RS=rs802526326;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	129061785	129061883	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:127528159;1allele=C/A;version=Hapmap2;RS=rs841217889;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	129125379	129125478	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:127601682;1allele=G/A;version=Hapmap2;RS=rs845347769;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	129273087	129273186	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:127750676;1allele=C/T;version=Hapmap2;RS=rs842301784;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	129282808	129282907	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:127760406;1allele=A/G;version=Hapmap2;RS=rs277150911;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	129310175	129310274	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:127796625;1allele=G/A;version=Hapmap2;RS=rs845489950;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	129321104	129321203	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:127807560;1allele=T/C;version=Hapmap2;RS=rs129611906;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	129370302	129370401	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:127848518;1allele=G/A;version=Hapmap2;RS=rs277151125;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	129519117	129519216	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:127998322;1allele=C/T;version=Hapmap2;RS=rs803627207;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	129613336	129613435	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:128093021;1allele=G/A;version=Hapmap1;RS=rs132028112;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	129638470	129638569	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:128147896;1allele=G/A;version=Hapmap2;RS=rs842849327;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	129664716	129664815	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:128175028;1allele=G/A;version=Hapmap2;RS=rs844375474;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	130175894	130175993	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:128669217;1allele=G/A;version=Hapmap2;RS=rs842180567;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	130195667	130195766	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:128687622;1allele=T/C;version=Hapmap2;RS=rs823335930;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	130195667	130195766	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:128687622;1allele=T/C;version=Hapmap2;RS=rs823335930;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	130199364	130199463	.	+	.	Name=Stalk_strength;B73v2_pos=3:128691319;1allele=A/C;version=Hapmap2;RS=rs823728934;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	130246520	130246619	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:128738492;1allele=C/T;version=Hapmap2;RS=rs1063529478;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	130308737	130308836	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:128801097;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	130315279	130315378	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:128807639;1allele=A/G;version=Hapmap2;RS=rs835993867;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	130416559	130416658	.	+	.	Name=Stalk_strength;B73v2_pos=3:128908636;1allele=C/T;version=Hapmap2;RS=rs838773269;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	130420333	130420432	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:128912410;1allele=G/C;version=Hapmap2;RS=rs725195152;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	130438408	130438507	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:128930486;1allele=G/A;version=Hapmap2;RS=rs823234523;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	130509405	130509504	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:129000525;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	130561529	130561628	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:129054368;1allele=G/T;version=Hapmap2;RS=rs802018713;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	130587142	130587241	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:129079259;1allele=A/G;version=Hapmap2;RS=rs131177150;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	130592020	130592119	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:129084137;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	130770724	130770823	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:129259729;1allele=G/A;version=Hapmap2;RS=rs808412124;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	131062466	131062565	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:129505714;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	131357763	131357862	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:129846481;1allele=T/C;version=Hapmap2;RS=rs807224540;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	131605019	131605118	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:130091216;1allele=G/A;version=Hapmap2;RS=rs129449703;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	131607431	131607530	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:130093628;1allele=C/T;version=Hapmap2;RS=rs129460892;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	131607431	131607530	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:130093628;1allele=C/T;version=Hapmap2;RS=rs129460892;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	131608816	131608915	.	+	.	Name=Height_above_ear;B73v2_pos=3:130095013;1allele=T/G;version=Hapmap2;RS=rs277153973;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	131645586	131645685	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:130133168;1allele=T/G;version=Hapmap2;RS=rs814374098;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	131645589	131645688	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:130133171;1allele=C/T;version=Hapmap2;RS=rs847922541;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	131853780	131853879	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:130333259;1allele=A/G;version=Hapmap2;RS=rs831239854;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	131964978	131965077	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:130445087;1allele=C/A;version=Hapmap2;RS=rs805811345;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	132252662	132252761	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:130715194;1allele=C/T;version=Hapmap2;RS=rs845110647;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	132547351	132547450	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:131036552;1allele=T/C;version=Hapmap2;RS=rs802600555;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	132601223	132601322	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:131080704;1allele=A/C;version=Hapmap2;RS=rs824247109;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	132603214	132603313	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:131082695;1allele=C/T;version=Hapmap2;RS=rs818815512;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	132603378	132603477	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:131082859;1allele=T/C;version=Hapmap2;RS=rs132029781;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	132763943	132764042	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:131250361;1allele=G/C;version=Hapmap2;RS=rs838775060;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	133060113	133060212	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:131501757;1allele=G/C;version=Hapmap2;RS=rs806317984;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	133078717	133078816	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:131520392;1allele=G/A;version=Hapmap2;RS=rs277156561;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	133141868	133141967	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:131608684;1allele=G/A;version=Hapmap2;RS=rs837250154;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	133337359	133337458	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:131776373;1allele=A/T;version=Hapmap2;RS=rs1064265136;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	133398968	133399067	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:131837814;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	133495643	133495742	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:131930996;1allele=T/G;version=Hapmap2;RS=rs132030097;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	133899872	133899971	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:132330823;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	134206537	134206636	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:132624310;1allele=C/A;version=Hapmap2;RS=rs814632098;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	134436896	134436995	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:132841474;1allele=T/C;version=Hapmap2;RS=rs849914482;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	134453283	134453382	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:132857861;1allele=A/G;version=Hapmap2;RS=rs819233953;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	134811620	134811719	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:133191830;1allele=A/C;version=Hapmap2;RS=rs129390586;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	134826611	134826710	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:133206981;1allele=A/G;version=Hapmap2;RS=rs129373429;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	135422316	135422415	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:133826849;1allele=A/C;version=Hapmap2;RS=rs839211045;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	135616281	135616380	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:134011098;1allele=C/T;version=Hapmap2;RS=rs819295188;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	135682114	135682213	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:134069264;1allele=C/T;version=Hapmap2;RS=rs822740150;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	135685014	135685113	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:134072164;1allele=C/T;version=Hapmap2;RS=rs839397339;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	136222981	136223080	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:134610743;1allele=A/G;version=Hapmap2;RS=rs726544614;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	136406121	136406220	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:134785077;1allele=T/C;version=Hapmap2;RS=rs826509047;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	136565300	136565399	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:134951864;1allele=C/T;version=Hapmap2;RS=rs132031574;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	136577606	136577705	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:134965432;1allele=A/G;version=Hapmap2;RS=rs129492815;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	136746730	136746829	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:135128032;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	136772032	136772131	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:135153336;1allele=C/T;version=Hapmap2;RS=rs129389780;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	136853080	136853179	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:135234292;1allele=C/G;version=Hapmap2;RS=rs831605658;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	137317634	137317733	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:135693150;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	137395940	137396039	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:135763962;1allele=T/G;version=Hapmap2;RS=rs277164117;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	137624866	137624965	.	+	.	Name=Stalk_strength;B73v2_pos=3:135997139;1allele=G/T;version=Hapmap2;RS=rs806098284;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	137643948	137644047	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:136017265;1allele=C/T;version=Hapmap2;RS=rs821055131;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	137955829	137955928	.	+	.	Name=Height_above_ear;B73v2_pos=3:136337376;1allele=/TAGTAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	138040927	138041026	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:136423108;1allele=T/C;version=Hapmap2;RS=rs129396058;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	138041703	138041802	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:136423884;1allele=G/T;version=Hapmap2;RS=rs129586117;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	138079523	138079622	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:136476575;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	138095467	138095566	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:136460629;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	138099524	138099623	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:136456571;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	138186566	138186665	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:136564134;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	138201835	138201934	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:136579403;1allele=A/G;version=Hapmap2;RS=rs129378282;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	138481112	138481211	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:136856319;1allele=G/A;version=Hapmap2;RS=rs820319910;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	138540411	138540510	.	+	.	Name=Starch;B73v2_pos=3:136923094;1allele=A/G;version=Hapmap2;RS=rs843271016;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	138569130	138569229	.	+	.	Name=Fructose;B73v2_pos=3:136951815;1allele=G/A;version=Hapmap2;RS=rs814851390;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	138614890	138614989	.	+	.	Name=Starch;B73v2_pos=3:136996905;1allele=C/A;version=Hapmap2;RS=rs832354485;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	138788877	138788976	.	+	.	Name=Starch;B73v2_pos=3:137178862;1allele=C/T;version=Hapmap2;RS=rs819878988;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	138833176	138833275	.	+	.	Name=Starch;B73v2_pos=3:137223160;1allele=C/A;version=Hapmap2;RS=rs812334647;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	138882452	138882551	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:137278682;1allele=T/C;version=Hapmap2;RS=rs1062432230;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	139843863	139843962	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:200533273;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	139936524	139936623	.	+	.	Name=Starch;B73v2_pos=3:138293259;1allele=C/T;version=Hapmap2;RS=rs809218917;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	139938777	139938876	.	+	.	Name=Leaf_width;B73v2_pos=3:138296160;1allele=C/T;version=Hapmap2;RS=rs277167857;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	140008607	140008706	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:138384601;1allele=C/G;version=Hapmap2;RS=rs129299917;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	140030094	140030193	.	+	.	Name=Ear_row_number;B73v2_pos=3:138404067;1allele=T/G;version=Hapmap2;RS=rs132033570;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	140171671	140171770	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:138549461;1allele=A/C;version=Hapmap2;RS=rs129363035;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	140260699	140260798	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:138638501;1allele=T/C;version=Hapmap2;RS=rs129354378;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	140260796	140260895	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:138638598;1allele=T/C;version=Hapmap2;RS=rs808839395;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	140397095	140397194	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:138772952;1allele=G/A;version=Hapmap2;RS=rs847617955;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	140831859	140831958	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:139182327;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	141184792	141184891	.	+	.	Name=Protein;B73v2_pos=3:139529699;1allele=C/A;version=Hapmap2;RS=rs823848291;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	141298397	141298496	.	+	.	Name=Starch;B73v2_pos=3:139671200;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	141535702	141535801	.	+	.	Name=Ear_row_number;B73v2_pos=3:139901428;1allele=T/C;version=Hapmap2;RS=rs821438575;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	141539961	141540060	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:139905787;1allele=C/T;version=Hapmap2;RS=rs132034444;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	141540054	141540153	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:139905880;1allele=C/T;version=Hapmap2;RS=rs832597442;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	141622942	141623041	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:139986555;1allele=T/C;version=Hapmap2;RS=rs837788162;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	141653932	141654031	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:140018787;1allele=C/T;version=Hapmap2;RS=rs807355264;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	142130857	142130956	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:140550633;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	142184257	142184356	.	+	.	Name=Stalk_strength;B73v2_pos=3:140495895;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	142190555	142190654	.	+	.	Name=Stalk_strength;B73v2_pos=3:140489597;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	142211309	142211408	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:140468841;1allele=T/C;version=Hapmap2;RS=rs832656386;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	142285704	142285802	.	+	.	Name=Ear_row_number;B73v2_pos=3:140676822;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	142486332	142486431	.	+	.	Name=Ear_row_number;B73v2_pos=3:140825885;1allele=G/A;version=Hapmap2;RS=rs818133977;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	143009762	143009860	.	+	.	Name=Ear_row_number;B73v2_pos=3:141253846;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	143057162	143057261	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:141300987;1allele=C/T;version=Hapmap2;RS=rs815558723;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	143115154	143115253	.	+	.	Name=Ear_row_number;B73v2_pos=3:141358988;1allele=T/C;version=Hapmap2;RS=rs817312445;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	143379670	143379769	.	+	.	Name=Leaf_length;B73v2_pos=3:141622296;1allele=C/T;version=Hapmap2;RS=rs129380813;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	143453098	143453197	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:141693337;1allele=C/T;version=Hapmap2;RS=rs819544321;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	143462083	143462182	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:141702322;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	143487432	143487531	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:141725432;1allele=A/T;version=Hapmap2;RS=rs129347041;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	143593890	143593989	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:141835031;1allele=C/T;version=Hapmap2;RS=rs830295638;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	143614050	143614149	.	+	.	Name=Ear_row_number;B73v2_pos=3:141855976;1allele=T/A;version=Hapmap2;RS=rs805670781;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	143627065	143627164	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:141868696;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	143765256	143765355	.	+	.	Name=Stalk_strength;B73v2_pos=3:142005966;1allele=C/A;version=Hapmap2;RS=rs823456726;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	143770620	143770719	.	+	.	Name=Starch;B73v2_pos=3:142011330;1allele=T/C;version=Hapmap2;RS=rs818301985;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	143786883	143786982	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:142027593;1allele=C/T;version=Hapmap1;RS=rs132035558;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	143819461	143819560	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:142060171;1allele=T/C;version=Hapmap2;RS=rs810389166;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	143877589	143877688	.	+	.	Name=Cob_diameter;B73v2_pos=3:142118154;1allele=G/A;version=Hapmap2;RS=rs129308657;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	144004049	144004148	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:142232890;1allele=G/A;version=Hapmap2;RS=rs726025586;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	144008317	144008416	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:142237158;1allele=G/C;version=Hapmap2;RS=rs829665173;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	144409125	144409224	.	+	.	Name=Starch;B73v2_pos=3:142630926;1allele=C/T;version=Hapmap2;RS=rs812175682;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	144482984	144483083	.	+	.	Name=Leaf_width;B73v2_pos=3:142690671;1allele=T/C;version=Hapmap2;RS=rs823491530;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	144514316	144514415	.	+	.	Name=Ear_row_number;B73v2_pos=3:142732708;1allele=A/T;version=Hapmap2;RS=rs132035846;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	144517105	144517204	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:142735497;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	144619892	144619991	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:142845773;1allele=T/G;version=Hapmap2;RS=rs834128212;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	144626211	144626310	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:142852092;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	144626492	144626591	.	+	.	Name=Stalk_strength;B73v2_pos=3:142852373;1allele=C/T;version=Hapmap2;RS=rs830291755;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	144648965	144649064	.	+	.	Name=Tassel_length;B73v2_pos=3:142874879;1allele=C/A;version=Hapmap2;RS=rs277173997;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	144917647	144917746	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:143207239;1allele=C/T;version=Hapmap2;RS=rs834982419;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	145189766	145189865	.	+	.	Name=Fructose;B73v2_pos=3:172389277;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	145313587	145313686	.	+	.	Name=Starch;B73v2_pos=3:143592294;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	145598820	145598919	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:143878978;1allele=G/A;version=Hapmap2;RS=rs826744187;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	145618355	145618454	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:143898518;1allele=T/C;version=Hapmap2;RS=rs808069025;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	145619571	145619670	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:143899734;1allele=T/C;version=Hapmap2;RS=rs840374408;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	145631489	145631588	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:143913002;1allele=G/A;version=Hapmap2;RS=rs811521027;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	145666856	145666955	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:143948386;1allele=A/G;version=Hapmap2;RS=rs820276528;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	145666999	145667098	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:143948529;1allele=C/T;version=Hapmap2;RS=rs724686101;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	146360066	146360165	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:144620395;1allele=G/A;version=Hapmap2;RS=rs833327769;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	146460019	146460118	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:144719865;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	146483598	146483697	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:144743276;1allele=A/G;version=Hapmap2;RS=rs813909799;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	146624726	146624825	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:144884400;1allele=A/T;version=Hapmap1;RS=rs132036874;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	147343892	147343991	.	+	.	Name=Tassel_length;B73v2_pos=3:145412001;1allele=G/C;version=Hapmap2;RS=rs825809381;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	147418810	147418909	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:145486922;1allele=C/A;version=Hapmap2;RS=rs129585076;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	147455395	147455494	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:145523508;1allele=T/C;version=Hapmap2;RS=rs1063362906;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	147460388	147460487	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:145528501;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	147537193	147537292	.	+	.	Name=Starch;B73v2_pos=3:145606544;1allele=T/C;version=Hapmap1;RS=rs129584494;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	147768169	147768268	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:145838242;1allele=C/T;version=Hapmap2;RS=rs1060520068;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	147825725	147825824	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:145895800;1allele=C/A;version=Hapmap2;RS=rs277177396;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	148020411	148020510	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:146087902;1allele=C/T;version=Hapmap2;RS=rs277177507;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	148449003	148449102	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:146540619;1allele=T/A;version=Hapmap2;RS=rs823968406;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	148489068	148489167	.	+	.	Name=Stalk_strength;B73v2_pos=3:146581437;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	148602018	148602117	.	+	.	Name=Starch;B73v2_pos=3:146691984;1allele=G/A;version=Hapmap2;RS=rs810972231;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	148625308	148625407	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:146715275;1allele=G/A;version=Hapmap2;RS=rs132037923;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	148710794	148710893	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:146801113;1allele=T/C;version=Hapmap2;RS=rs846186750;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	149415778	149415877	.	+	.	Name=Starch;B73v2_pos=3:147349239;1allele=C/A;version=Hapmap2;RS=rs828829632;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	149574747	149574846	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:147476181;1allele=A/T;version=Hapmap2;RS=rs802633717;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	149614942	149615041	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:147515916;1allele=A/G;version=Hapmap2;RS=rs846452911;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	149616934	149617033	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:147517908;1allele=T/C;version=Hapmap2;RS=rs839822587;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	149860619	149860718	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:147724850;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	150050398	150050497	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:147972071;1allele=C/T;version=Hapmap2;RS=rs132038856;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	150143366	150143465	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:148063729;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	150299637	150299736	.	+	.	Name=Tassel_length;B73v2_pos=3:148226527;1allele=A/G;version=Hapmap2;RS=rs813852367;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	150402559	150402658	.	+	.	Name=Leaf_length;B73v2_pos=3:148324841;1allele=T/C;version=Hapmap2;RS=rs841143463;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	150633804	150633903	.	+	.	Name=Starch;B73v2_pos=3:148552622;1allele=G/A;version=Hapmap2;RS=rs836620848;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	151018177	151018276	.	+	.	Name=Days_to_silk;B73v2_pos=3:148950315;1allele=A/C;version=Hapmap2;RS=rs831495068;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	151176059	151176158	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:149090610;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	151616435	151616534	.	+	.	Name=Days_to_silk;B73v2_pos=3:149557778;1allele=A/G;version=Hapmap2;RS=rs832665785;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	151884028	151884127	.	+	.	Name=Days_to_silk;B73v2_pos=3:149812720;1allele=G/C;version=Hapmap1;RS=rs132039943;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	151886972	151887071	.	+	.	Name=Days_to_silk;B73v2_pos=3:149815664;1allele=A/G;version=Hapmap2;RS=rs845366258;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	151886972	151887071	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:149815664;1allele=A/G;version=Hapmap2;RS=rs845366258;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	151985546	151985645	.	+	.	Name=Starch;B73v2_pos=3:149908836;1allele=C/T;version=Hapmap2;RS=rs821702425;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	151995537	151995636	.	+	.	Name=Starch;B73v2_pos=3:149918827;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	152003225	152003324	.	+	.	Name=Cob_diameter;B73v2_pos=3:149926515;1allele=G/A;version=Hapmap2;RS=rs129495419;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	152080377	152080476	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:150029902;1allele=A/C;version=Hapmap2;RS=rs277183761;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	152091567	152091666	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:150053706;1allele=T/C;version=Hapmap1;RS=rs725934448;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	153138165	153138264	.	+	.	Name=Days_to_silk;B73v2_pos=3:151015827;1allele=A/G;version=Hapmap2;RS=rs844010936;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	153164412	153164511	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:151042078;1allele=T/A;version=Hapmap2;RS=rs277185048;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	153175963	153176062	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:151053629;1allele=C/G;version=Hapmap1;RS=rs129580794;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	153180393	153180492	.	+	.	Name=Days_to_silk;B73v2_pos=3:151058059;1allele=G/T;version=Hapmap2;RS=rs129504490;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	153182352	153182451	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:151060018;1allele=A/G;version=Hapmap2;RS=rs811301709;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	153182352	153182451	.	+	.	Name=Days_to_silk;B73v2_pos=3:151060018;1allele=A/G;version=Hapmap2;RS=rs811301709;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	153184228	153184327	.	+	.	Name=Days_to_silk;B73v2_pos=3:151061897;1allele=C/T;version=Hapmap2;RS=rs803828227;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	153321378	153321477	.	+	.	Name=Days_to_silk;B73v2_pos=3:151193722;1allele=C/T;version=Hapmap2;RS=rs129403637;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	153324373	153324472	.	+	.	Name=Days_to_silk;B73v2_pos=3:151196717;1allele=G/A;version=Hapmap2;RS=rs812139577;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	153348520	153348619	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:151220470;1allele=G/A;version=Hapmap2;RS=rs806842200;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	153470485	153470584	.	+	.	Name=Cob_diameter;B73v2_pos=3:151340094;1allele=A/G;version=Hapmap2;RS=rs837973680;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	153761684	153761783	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:151644047;1allele=A/G;version=Hapmap2;RS=rs819486134;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	153832588	153832687	.	+	.	Name=Leaf_width;B73v2_pos=1:275862164;1allele=G/A;version=Hapmap2;RS=rs802890078;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	153839800	153839899	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:151726639;1allele=G/T;version=Hapmap2;RS=rs132040781;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	153927291	153927390	.	+	.	Name=Days_to_silk;B73v2_pos=3:151808177;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	153940446	153940545	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:151821645;1allele=T/C;version=Hapmap2;RS=rs820528961;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	154062356	154062455	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:151934054;1allele=T/C;version=Hapmap2;RS=rs1061407979;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	154481166	154481265	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:152376322;1allele=C/G;version=Hapmap2;RS=rs129326550;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	155309912	155310011	.	+	.	Name=Fructose;B73v2_pos=3:153169015;1allele=T/C;version=Hapmap2;RS=rs845163977;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	155506309	155506408	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:153365216;1allele=G/T;version=Hapmap2;RS=rs827349780;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	155806599	155806698	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:153659899;1allele=A/T;version=Hapmap2;RS=rs831675530;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	155852059	155852158	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:153705879;1allele=A/G;version=Hapmap2;RS=rs831164036;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	156173804	156173903	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:154029791;1allele=C/A;version=Hapmap2;RS=rs802837245;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	156205241	156205340	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:154061228;1allele=C/T;version=Hapmap2;RS=rs812450549;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	156251836	156251935	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:154111008;1allele=T/C;version=Hapmap2;RS=rs828578839;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	156257301	156257400	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:154116473;1allele=T/G;version=Hapmap2;RS=rs846377794;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	156258442	156258541	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:154117614;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	156269907	156270006	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:154077493;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	156333918	156334017	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:154180569;1allele=T/C;version=Hapmap2;RS=rs846301647;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	156493179	156493278	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:154329251;1allele=G/C;version=Hapmap2;RS=rs816620496;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	156524690	156524789	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:154360768;1allele=T/G;version=Hapmap2;RS=rs824698949;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	156524701	156524800	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:154360779;1allele=A/T;version=Hapmap2;RS=rs820890339;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	156568471	156568570	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:154404590;1allele=G/T;version=Hapmap2;RS=rs832983451;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	156569515	156569614	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:154405633;1allele=A/G;version=Hapmap2;RS=rs840389467;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	156616408	156616507	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:154452608;1allele=C/T;version=Hapmap2;RS=rs810314505;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	156619803	156619902	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:154456003;1allele=C/A;version=Hapmap2;RS=rs834943521;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	156675559	156675658	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:154506520;1allele=G/A;version=Hapmap2;RS=rs818420248;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156710415	156710514	.	+	.	Name=Days_to_silk;B73v2_pos=3:154549413;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	156746143	156746242	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:154576460;1allele=C/G;version=Hapmap2;RS=rs839792136;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	156767675	156767774	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154597855;1allele=A/G;version=Hapmap2;RS=rs806187624;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	156828091	156828190	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154658287;1allele=/CTGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	156831152	156831251	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154661348;1allele=G/A;version=Hapmap2;RS=rs129490218;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156831152	156831251	.	+	.	Name=Plant_height;B73v2_pos=3:154661348;1allele=G/A;version=Hapmap2;RS=rs129490218;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156832301	156832400	.	+	.	Name=Plant_height;B73v2_pos=3:154662497;1allele=A/T;version=Hapmap2;RS=rs813769247;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	156832301	156832400	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154662497;1allele=A/T;version=Hapmap2;RS=rs813769247;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	156832301	156832400	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:154662497;1allele=A/T;version=Hapmap2;RS=rs813769247;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	156832905	156833004	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154663101;1allele=C/T;version=Hapmap2;RS=rs835655672;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	156835451	156835550	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154665647;1allele=C/T;version=Hapmap2;RS=rs129319671;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	156852298	156852397	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154682497;1allele=G/A;version=Hapmap2;RS=rs846232866;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156853851	156853950	.	+	.	Name=Plant_height;B73v2_pos=3:154684050;1allele=G/A;version=Hapmap2;RS=rs801537309;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156853851	156853950	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154684050;1allele=G/A;version=Hapmap2;RS=rs801537309;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156853851	156853950	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:154684050;1allele=G/A;version=Hapmap2;RS=rs801537309;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156855141	156855240	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154685340;1allele=A/G;version=Hapmap2;RS=rs845807433;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	156891497	156891596	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154764160;1allele=G/C;version=Hapmap2;RS=rs825762442;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	156898805	156898904	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154771468;1allele=G/A;version=Hapmap2;RS=rs277188782;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156900473	156900572	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154773136;1allele=G/A;version=Hapmap2;RS=rs833865746;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	156908211	156908310	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154780875;1allele=T/C;version=Hapmap2;RS=rs1061742772;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	156935944	156936043	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:154808658;1allele=G/T;version=Hapmap2;RS=rs277188826;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	156940495	156940594	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154813209;1allele=G/A;version=Hapmap2;RS=rs824450836;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156985533	156985632	.	+	.	Name=Plant_height;B73v2_pos=3:154705351;1allele=G/A;version=Hapmap2;RS=rs828161408;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156985772	156985871	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:154705590;1allele=A/C;version=Hapmap2;RS=rs811894719;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	156988845	156988944	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:154708663;1allele=G/A;version=Hapmap2;RS=rs277188629;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	156988845	156988944	.	+	.	Name=Plant_height;B73v2_pos=3:154708663;1allele=G/A;version=Hapmap2;RS=rs277188629;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	157018877	157018976	.	+	.	Name=Tassel_length;B73v2_pos=3:154738689;1allele=A/G;version=Hapmap2;RS=rs132042561;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	157025545	157025644	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:154854499;1allele=G/A;version=Hapmap2;RS=rs277188886;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	157048173	157048272	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:154877128;1allele=T/C;version=Hapmap2;RS=rs824473772;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	157093652	157093751	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:154923288;1allele=T/C;version=Hapmap2;RS=rs846824990;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	157095428	157095527	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:154925064;1allele=A/G;version=Hapmap2;RS=rs1060974582;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	157235344	157235443	.	+	.	Name=Ear_height;B73v2_pos=3:155101219;1allele=A/G;version=Hapmap2;RS=rs129464925;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	157278625	157278724	.	+	.	Name=Plant_height;B73v2_pos=3:155145879;1allele=T/C;version=Hapmap2;RS=rs846505334;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	157278625	157278724	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:155145879;1allele=T/C;version=Hapmap2;RS=rs846505334;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	157278625	157278724	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:155145879;1allele=T/C;version=Hapmap2;RS=rs846505334;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	157284205	157284304	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:155151466;1allele=C/T;version=Hapmap2;RS=rs843322006;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	157284205	157284304	.	+	.	Name=Plant_height;B73v2_pos=3:155151466;1allele=C/T;version=Hapmap2;RS=rs843322006;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	157310889	157310988	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:155056785;1allele=A/C;version=Hapmap2;RS=rs837770185;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	157824629	157824728	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:155615720;1allele=A/G;version=Hapmap2;RS=rs817586305;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	158170540	158170639	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:155885455;1allele=T/C;version=Hapmap2;RS=rs804664565;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	158250457	158250556	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:155960467;1allele=T/A;version=Hapmap2;RS=rs812023158;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	158270462	158270561	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:155980560;1allele=G/A;version=Hapmap2;RS=rs810076798;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	158317071	158317170	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:156025677;1allele=C/T;version=Hapmap2;RS=rs809186510;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	158317246	158317345	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:156025852;1allele=G/A;version=Hapmap2;RS=rs129529701;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	158341778	158341877	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:156050384;1allele=T/C;version=Hapmap2;RS=rs828883415;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	158342280	158342379	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:156050886;1allele=G/C;version=Hapmap2;RS=rs839854635;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	158342280	158342379	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:156050886;1allele=G/C;version=Hapmap2;RS=rs839854635;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	158342280	158342379	.	+	.	Name=Plant_height;B73v2_pos=3:156050886;1allele=G/C;version=Hapmap2;RS=rs839854635;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	158343828	158343927	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:156052436;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	158365823	158365922	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:156074297;1allele=T/C;version=Hapmap2;RS=rs821396977;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	158373132	158373231	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:156080843;1allele=A/T;version=Hapmap2;RS=rs814307376;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	158396582	158396681	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:156105408;1allele=G/T;version=Hapmap2;RS=rs837613354;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	158439921	158440020	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:156148785;1allele=A/T;version=Hapmap2;RS=rs806448263;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	158458351	158458450	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:156167343;1allele=C/G;version=Hapmap2;RS=rs842204112;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	158458643	158458742	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:156167635;1allele=A/G;version=Hapmap2;RS=rs277190803;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	158472684	158472783	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:156176679;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	158479508	158479607	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:156188744;1allele=A/G;version=Hapmap2;RS=rs827235108;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	158501168	158501267	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:156210410;1allele=A/G;version=Hapmap2;RS=rs817818170;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	158542806	158542905	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:156249575;1allele=T/C;version=Hapmap2;RS=rs832400780;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	158542806	158542905	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:156249575;1allele=T/C;version=Hapmap2;RS=rs832400780;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	158543305	158543404	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:156250075;1allele=T/G;version=Hapmap2;RS=rs835212064;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	158561092	158561191	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:156267862;1allele=G/A;version=Hapmap2;RS=rs129342620;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	158562476	158562575	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:156269246;1allele=A/C;version=Hapmap2;RS=rs841375810;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	158562585	158562684	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:156269355;1allele=A/G;version=Hapmap2;RS=rs815716859;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	158569274	158569373	.	+	.	Name=Plant_height;B73v2_pos=3:156276044;1allele=G/A;version=Hapmap2;RS=rs277190885;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	158569551	158569650	.	+	.	Name=Plant_height;B73v2_pos=3:156276321;1allele=T/C;version=Hapmap2;RS=rs725210502;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	158570702	158570801	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:156277472;1allele=G/C;version=Hapmap2;RS=rs132044746;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	158571180	158571279	.	+	.	Name=Plant_height;B73v2_pos=3:156277950;1allele=G/T;version=Hapmap2;RS=rs129281411;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	158572901	158573000	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:156279671;1allele=G/A;version=Hapmap2;RS=rs129508940;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	158576870	158576969	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:156283640;1allele=A/T;version=Hapmap2;RS=rs807962305;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	158576870	158576969	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:156283640;1allele=A/T;version=Hapmap2;RS=rs807962305;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	158578124	158578223	.	+	.	Name=Plant_height;B73v2_pos=3:156284894;1allele=C/T;version=Hapmap2;RS=rs129583691;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	158578124	158578223	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:156284894;1allele=C/T;version=Hapmap2;RS=rs129583691;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	158579180	158579279	.	+	.	Name=Plant_height;B73v2_pos=3:156285949;1allele=C/T;version=Hapmap2;RS=rs833493807;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	158579461	158579560	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:156286230;1allele=C/A;version=Hapmap2;RS=rs129336695;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	158579585	158579684	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:156286354;1allele=A/T;version=Hapmap2;RS=rs821868024;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	158617191	158617290	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:156306268;1allele=T/G;version=Hapmap2;RS=rs810062860;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	158619042	158619141	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:156308119;1allele=C/G;version=Hapmap2;RS=rs809628948;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	158619852	158619951	.	+	.	Name=Ear_height;B73v2_pos=3:156308929;1allele=A/G;version=Hapmap2;RS=rs840094877;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	158643373	158643472	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:231307378;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	158643373	158643472	.	+	.	Name=Height_above_ear;B73v2_pos=1:231307378;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	158655382	158655481	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:156356475;1allele=G/A;version=Hapmap2;RS=rs816958150;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	158740978	158741077	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:156433216;1allele=T/C;version=Hapmap2;RS=rs129337757;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	158751035	158751134	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:156443273;1allele=T/G;version=Hapmap2;RS=rs818308562;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	159438807	159438906	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:157184083;1allele=G/A;version=Hapmap2;RS=rs842435644;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	159463029	159463128	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157209301;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	159662025	159662124	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157420285;1allele=T/G;version=Hapmap2;RS=rs129542497;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	159665610	159665709	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157423871;1allele=A/T;version=Hapmap2;RS=rs1061543442;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	159730730	159730829	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157496517;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	159743512	159743611	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157508589;1allele=T/C;version=Hapmap2;RS=rs277191493;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	159743526	159743625	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157508603;1allele=T/C;version=Hapmap2;RS=rs129407488;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	159801482	159801581	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157566953;1allele=A/C;version=Hapmap2;RS=rs838054479;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	159811927	159812026	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:157577400;1allele=T/A;version=Hapmap2;RS=rs819760348;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	159889597	159889696	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157654387;1allele=G/C;version=Hapmap2;RS=rs847071746;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	159891917	159892016	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157656707;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	159969445	159969544	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157733782;1allele=A/G;version=Hapmap2;RS=rs129583000;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	159991079	159991178	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:157755416;1allele=G/A;version=Hapmap1;RS=rs132046090;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	159993955	159994054	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157758292;1allele=T/C;version=Hapmap2;RS=rs277192016;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	159993978	159994077	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157758315;1allele=G/A;version=Hapmap2;RS=rs129604143;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	159996732	159996831	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157761923;1allele=A/G;version=Hapmap2;RS=rs277192026;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	160174273	160174372	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:157957403;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	160337861	160337960	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158087179;1allele=G/A;version=Hapmap2;RS=rs277193144;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	160541245	160541344	.	+	.	Name=Ear_row_number;B73v2_pos=3:158316832;1allele=T/G;version=Hapmap2;RS=rs277193264;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	160576022	160576121	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158346412;1allele=C/T;version=Hapmap2;RS=rs277193338;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	160579103	160579202	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158349493;1allele=A/G;version=Hapmap1;RS=rs132046297;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	160732777	160732876	.	+	.	Name=Days_to_silk;B73v2_pos=3:158504417;1allele=T/A;version=Hapmap2;RS=rs132046347;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	160732777	160732876	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158504417;1allele=T/A;version=Hapmap1;RS=rs132046347;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	160732777	160732876	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:158504417;1allele=T/A;version=Hapmap1;RS=rs132046347;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	160732777	160732876	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:158504417;1allele=T/A;version=Hapmap2;RS=rs132046347;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	160732887	160732986	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:158504527;1allele=A/C;version=Hapmap2;RS=rs277193455;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	160742122	160742221	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:158513762;1allele=G/T;version=Hapmap2;RS=rs129467990;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	160742478	160742577	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:158514118;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	160745537	160745636	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:158517177;1allele=T/G;version=Hapmap2;RS=rs808607995;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	160751334	160751433	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:158522973;1allele=C/T;version=Hapmap2;RS=rs849158929;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	160800181	160800280	.	+	.	Name=Ear_height;B73v2_pos=3:158581428;1allele=G/A;version=Hapmap2;RS=rs804648067;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	160913682	160913781	.	+	.	Name=Tassel_length;B73v2_pos=3:158694802;1allele=C/T;version=Hapmap2;RS=rs803545526;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	160914624	160914723	.	+	.	Name=Ear_height;B73v2_pos=3:158695744;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	160926258	160926357	.	+	.	Name=Height_above_ear;B73v2_pos=3:158707333;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	160926264	160926363	.	+	.	Name=Height_above_ear;B73v2_pos=3:158707339;1allele=G/A;version=Hapmap2;RS=rs823123948;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	160936182	160936281	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:158717542;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	160936183	160936282	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:158717543;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	160987680	160987779	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:158767711;1allele=/CGTCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	160989300	160989399	.	+	.	Name=Plant_height;B73v2_pos=3:158769327;1allele=A/G;version=Hapmap2;RS=rs826297047;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	161010153	161010252	.	+	.	Name=Days_to_silk;B73v2_pos=3:158790186;1allele=G/T;version=Hapmap2;RS=rs129586660;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	161010153	161010252	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158790186;1allele=G/T;version=Hapmap2;RS=rs129586660;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	161010153	161010252	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:158790186;1allele=G/T;version=Hapmap2;RS=rs129586660;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	161033587	161033686	.	+	.	Name=Ear_height;B73v2_pos=3:158817097;1allele=T/C;version=Hapmap2;RS=rs809221405;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161053360	161053459	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:158837153;1allele=C/T;version=Hapmap2;RS=rs810838201;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161054665	161054764	.	+	.	Name=Ear_height;B73v2_pos=3:158838458;1allele=A/G;version=Hapmap2;RS=rs814957288;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161070553	161070652	.	+	.	Name=Ear_height;B73v2_pos=3:158877932;1allele=T/C;version=Hapmap2;RS=rs809226439;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161075798	161075897	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:158883176;1allele=A/T;version=Hapmap2;RS=rs819969424;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	161075798	161075897	.	+	.	Name=Ear_height;B73v2_pos=3:158883176;1allele=A/T;version=Hapmap2;RS=rs819969424;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	161083326	161083425	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:158890704;1allele=C/T;version=Hapmap2;RS=rs277193856;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161088645	161088744	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158896023;1allele=G/T;version=Hapmap2;RS=rs277193886;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	161092709	161092808	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:158900089;1allele=G/A;version=Hapmap2;RS=rs817468479;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	161093972	161094071	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158901352;1allele=/CGGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	161094019	161094118	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:158901399;1allele=A/T;version=Hapmap2;RS=rs277193915;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	161094019	161094118	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:158901399;1allele=A/T;version=Hapmap2;RS=rs277193915;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	161094019	161094118	.	+	.	Name=Days_to_silk;B73v2_pos=3:158901399;1allele=A/T;version=Hapmap2;RS=rs277193915;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	161094019	161094118	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:158901399;1allele=A/T;version=Hapmap2;RS=rs277193915;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	161098620	161098719	.	+	.	Name=Ear_row_number;B73v2_pos=3:158906000;1allele=T/C;version=Hapmap2;RS=rs826816334;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161124815	161124914	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:158932195;1allele=C/T;version=Hapmap2;RS=rs806757648;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161126436	161126535	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:158933816;1allele=G/A;version=Hapmap2;RS=rs850303075;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	161126902	161127001	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:158934282;1allele=C/T;version=Hapmap2;RS=rs277193996;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161145361	161145460	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:158952742;1allele=A/G;version=Hapmap2;RS=rs829617538;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161165117	161165216	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:158972498;1allele=T/A;version=Hapmap2;RS=rs132046830;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161189715	161189814	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:158997120;1allele=A/C;version=Hapmap2;RS=rs843938904;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	161289069	161289168	.	+	.	Name=Ear_height;B73v2_pos=3:159101781;1allele=C/A;version=Hapmap2;RS=rs834154376;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	161319206	161319305	.	+	.	Name=Ear_height;B73v2_pos=3:159134138;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	161480312	161480411	.	+	.	Name=Ear_height;B73v2_pos=3:159207397;1allele=C/T;version=Hapmap2;RS=rs827114276;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161586910	161587009	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:159385482;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	161591022	161591121	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159389594;1allele=/CAGGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	161701563	161701662	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159516956;1allele=A/C;version=Hapmap2;RS=rs129417401;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161702492	161702591	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:159517885;1allele=A/G;version=Hapmap2;RS=rs824047970;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161702492	161702591	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159517885;1allele=A/G;version=Hapmap2;RS=rs824047970;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161712034	161712133	.	+	.	Name=Ear_height;B73v2_pos=3:159527428;1allele=A/G;version=Hapmap2;RS=rs843190061;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161712416	161712515	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159527810;1allele=G/A;version=Hapmap2;RS=rs277194486;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	161726931	161727030	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:159541958;1allele=C/T;version=Hapmap2;RS=rs837007087;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161736098	161736197	.	+	.	Name=Ear_height;B73v2_pos=3:159551070;1allele=G/A;version=Hapmap2;RS=rs820346307;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	161740684	161740783	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159555657;1allele=A/T;version=Hapmap2;RS=rs129481423;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	161741078	161741177	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159556051;1allele=T/G;version=Hapmap2;RS=rs132047130;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	161741279	161741378	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159556252;1allele=T/G;version=Hapmap1;RS=rs129535400;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	161784943	161785042	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159599351;1allele=A/G;version=Hapmap2;RS=rs845532580;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161796667	161796766	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:159611075;1allele=G/A;version=Hapmap2;RS=rs807274271;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	161810341	161810440	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:159625696;1allele=A/C;version=Hapmap2;RS=rs277194599;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	161820439	161820538	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:159636431;1allele=T/C;version=Hapmap2;RS=rs820673454;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161826174	161826273	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:159642166;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	161865915	161866014	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:159681907;1allele=A/G;version=Hapmap2;RS=rs843253451;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161866449	161866548	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:159682441;1allele=C/A;version=Hapmap2;RS=rs844894051;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	161868041	161868140	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159684034;1allele=C/T;version=Hapmap2;RS=rs727343200;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161872800	161872899	.	+	.	Name=Ear_height;B73v2_pos=3:159688792;1allele=A/G;version=Hapmap2;RS=rs277194683;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161891228	161891327	.	+	.	Name=Days_to_silk;B73v2_pos=3:159705077;1allele=C/T;version=Hapmap2;RS=rs129464282;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161894176	161894275	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159708026;1allele=A/G;version=Hapmap2;RS=rs129562075;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161894176	161894275	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:159708026;1allele=A/G;version=Hapmap2;RS=rs129562075;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161905549	161905648	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:159719413;1allele=G/A;version=Hapmap2;RS=rs822096181;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	161912005	161912104	.	+	.	Name=Leaf_width;B73v2_pos=3:159727409;1allele=C/T;version=Hapmap2;RS=rs129318008;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161913581	161913680	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:159728985;1allele=C/T;version=Hapmap2;RS=rs823862307;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161928217	161928316	.	+	.	Name=Days_to_silk;B73v2_pos=3:159743623;1allele=A/G;version=Hapmap2;RS=rs277194771;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161928217	161928316	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:159743623;1allele=A/G;version=Hapmap2;RS=rs277194771;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	161928222	161928321	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159743628;1allele=T/C;version=Hapmap2;RS=rs277194772;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	161942796	161942895	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:159757179;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	161986173	161986272	.	+	.	Name=Days_to_silk;B73v2_pos=3:159799729;1allele=T/C;version=Hapmap2;RS=rs132047344;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	161987253	161987352	.	+	.	Name=Ear_row_number;B73v2_pos=3:159800809;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	161987562	161987661	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:159801118;1allele=T/A;version=Hapmap2;RS=rs816306610;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	161987562	161987661	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:159801118;1allele=T/A;version=Hapmap2;RS=rs816306610;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	161987562	161987661	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:159801118;1allele=T/A;version=Hapmap2;RS=rs816306610;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	161987562	161987661	.	+	.	Name=Days_to_silk;B73v2_pos=3:159801118;1allele=T/A;version=Hapmap2;RS=rs816306610;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	161998341	161998440	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:159811827;1allele=A/G;version=Hapmap2;RS=rs129488547;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	162005212	162005311	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:159818698;1allele=C/G;version=Hapmap2;RS=rs132047604;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	162009476	162009575	.	+	.	Name=Tassel_length;B73v2_pos=3:159822962;1allele=C/A;version=Hapmap2;RS=rs820202965;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	162045845	162045944	.	+	.	Name=Tassel_length;B73v2_pos=3:159859104;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162053886	162053985	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:159867077;1allele=A/G;version=Hapmap2;RS=rs277194997;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	162059823	162059922	.	+	.	Name=Ear_height;B73v2_pos=3:159872948;1allele=T/C;version=Hapmap2;RS=rs129524951;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	162262785	162262884	.	+	.	Name=Ear_row_number;B73v2_pos=3:160079122;1allele=A/C;version=Hapmap2;RS=rs842705663;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	162511645	162511744	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:160328784;1allele=A/G;version=Hapmap1;RS=rs132048060;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	162513588	162513687	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:160330727;1allele=A/C;version=Hapmap2;RS=rs813375557;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	162534157	162534256	.	+	.	Name=Fructose;B73v2_pos=3:160351300;1allele=C/A;version=Hapmap2;RS=rs822257480;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	162534420	162534519	.	+	.	Name=Stalk_strength;B73v2_pos=3:160351563;1allele=C/T;version=Hapmap2;RS=rs843153157;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	162585139	162585238	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:160402286;1allele=C/T;version=Hapmap2;RS=rs727303100;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	162621093	162621192	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:160438244;1allele=A/T;version=Hapmap2;RS=rs806348495;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	162643450	162643549	.	+	.	Name=Ear_height;B73v2_pos=3:160473733;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162678350	162678449	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:160509809;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162680779	162680878	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:160512238;1allele=C/A;version=Hapmap2;RS=rs830716814;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	162684999	162685098	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:160516458;1allele=C/T;version=Hapmap2;RS=rs129547353;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	162686351	162686450	.	+	.	Name=Days_to_silk;B73v2_pos=3:160517810;1allele=A/G;version=Hapmap2;RS=rs277195469;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	162730413	162730512	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:169083468;1allele=T/C;version=Hapmap2;RS=rs818510989;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	162744862	162744961	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:160575246;1allele=A/G;version=Hapmap2;RS=rs818189475;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	162751353	162751452	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:160581737;1allele=A/G;version=Hapmap2;RS=rs1061671309;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	162825048	162825147	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:160675917;1allele=A/G;version=Hapmap2;RS=rs1063536335;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	162841615	162841714	.	+	.	Name=Leaf_width;B73v2_pos=3:160694133;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162842053	162842152	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:160694571;1allele=G/A;version=Hapmap2;RS=rs277195689;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	162909257	162909356	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:160767234;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162909257	162909356	.	+	.	Name=Plant_height;B73v2_pos=3:160767234;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162920938	162921037	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:160755537;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162921165	162921264	.	+	.	Name=Days_to_silk;B73v2_pos=3:160755310;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162921165	162921264	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:160755310;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162921473	162921572	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:160755002;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	162922153	162922252	.	+	.	Name=Fructose;B73v2_pos=3:160754322;1allele=C/T;version=Hapmap2;RS=rs277195770;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	162923838	162923937	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:160752637;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	163098623	163098722	.	+	.	Name=Ear_row_number;B73v2_pos=3:160928617;1allele=C/T;version=Hapmap2;RS=rs810266276;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	163122910	163123009	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:160953585;1allele=C/T;version=Hapmap2;RS=rs1063891810;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	163243087	163243186	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:161073620;1allele=T/G;version=Hapmap2;RS=rs277196262;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	163244329	163244428	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:161074862;1allele=A/C;version=Hapmap2;RS=rs129475236;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	163396814	163396913	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:161222765;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	163416003	163416102	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:161248662;1allele=C/G;version=Hapmap1;RS=rs132048459;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	163417527	163417626	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:161250186;1allele=G/A;version=Hapmap2;RS=rs823738900;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	163597642	163597741	.	+	.	Name=Fructose;B73v2_pos=3:161410503;1allele=G/A;version=Hapmap2;RS=rs840508874;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	163728941	163729040	.	+	.	Name=Ear_height;B73v2_pos=3:161535796;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	163753432	163753531	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:161560542;1allele=G/A;version=Hapmap2;RS=rs129597557;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	163753864	163753963	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:161560974;1allele=C/G;version=Hapmap2;RS=rs129378500;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	163768199	163768298	.	+	.	Name=Days_to_silk;B73v2_pos=3:161575309;1allele=G/A;version=Hapmap1;RS=rs132048741;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	163768201	163768300	.	+	.	Name=Days_to_silk;B73v2_pos=3:161575311;1allele=C/T;version=Hapmap1;RS=rs132048742;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	163768201	163768300	.	+	.	Name=Leaf_width;B73v2_pos=3:161575311;1allele=C/T;version=Hapmap1;RS=rs132048742;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	163768381	163768480	.	+	.	Name=Leaf_width;B73v2_pos=3:161575491;1allele=G/C;version=Hapmap2;RS=rs803235542;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	163779374	163779473	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:161586484;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	163779374	163779473	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:161586484;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	163782242	163782341	.	+	.	Name=Ear_height;B73v2_pos=3:161589352;1allele=T/C;version=Hapmap2;RS=rs817024749;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	163831108	163831207	.	+	.	Name=Ear_row_number;B73v2_pos=3:161637928;1allele=A/T;version=Hapmap2;RS=rs826983917;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	163891363	163891462	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:161700200;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	163927516	163927615	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:161730284;1allele=T/C;version=Hapmap2;RS=rs129318339;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	163947769	163947868	.	+	.	Name=Height_above_ear;B73v2_pos=3:161750763;1allele=T/C;version=Hapmap1;RS=rs826071963;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	163973227	163973326	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:161785024;1allele=A/G;version=Hapmap2;RS=rs812902391;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164012622	164012721	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:161824433;1allele=G/A;version=Hapmap2;RS=rs847935309;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	164032381	164032480	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:161844195;1allele=A/G;version=Hapmap2;RS=rs838754692;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164034153	164034252	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:161845968;1allele=G/A;version=Hapmap2;RS=rs1063540666;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164082168	164082267	.	+	.	Name=Leaf_width;B73v2_pos=3:161892845;1allele=T/C;version=Hapmap2;RS=rs848727839;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	164082226	164082325	.	+	.	Name=Tassel_length;B73v2_pos=3:161892903;1allele=T/C;version=Hapmap2;RS=rs802779048;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164093855	164093954	.	+	.	Name=Stalk_strength;B73v2_pos=3:161904659;1allele=A/G;version=Hapmap2;RS=rs835505747;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164120234	164120333	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:161930776;1allele=A/G;version=Hapmap2;RS=rs129588780;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164152313	164152412	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:161962855;1allele=TG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164152597	164152696	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:161963139;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164152629	164152728	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:161963171;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164212105	164212204	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:162024424;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164250500	164250599	.	+	.	Name=Ear_height;B73v2_pos=3:162064009;1allele=G/C;version=Hapmap2;RS=rs132049374;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	164251343	164251442	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:162064852;1allele=/GCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164268144	164268243	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:162082677;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164269152	164269251	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162083685;1allele=C/G;version=Hapmap2;RS=rs1061052707;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	164269226	164269325	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:162083759;1allele=G/A;version=Hapmap2;RS=rs846709660;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	164270508	164270607	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:162085041;1allele=T/G;version=Hapmap2;RS=rs841903760;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	164278503	164278602	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:162093037;1allele=C/G;version=Hapmap2;RS=rs809903485;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	164278774	164278873	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162093308;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164281298	164281397	.	+	.	Name=Ear_height;B73v2_pos=3:162095826;1allele=G/T;version=Hapmap1;RS=rs132049597;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	164281298	164281397	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:162095826;1allele=G/T;version=Hapmap1;RS=rs132049597;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	164284555	164284654	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162099084;1allele=A/G;version=Hapmap2;RS=rs830455616;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	164291221	164291320	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:162105750;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164318058	164318157	.	+	.	Name=Glucose;B73v2_pos=3:162123583;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164361701	164361800	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162174936;1allele=C/T;version=Hapmap2;RS=rs132049651;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164363962	164364061	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:162177197;1allele=T/G;version=Hapmap2;RS=rs129445737;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	164368110	164368209	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162181345;1allele=T/C;version=Hapmap2;RS=rs830866917;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164368121	164368220	.	+	.	Name=Ear_height;B73v2_pos=3:162181356;1allele=A/C;version=Hapmap2;RS=rs826231389;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	164368326	164368425	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162181561;1allele=T/C;version=Hapmap2;RS=rs840139544;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164369020	164369119	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:162182255;1allele=T/G;version=Hapmap2;RS=rs823652055;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	164408980	164409079	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:162222218;1allele=T/C;version=Hapmap2;RS=rs824024277;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164418913	164419012	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162232151;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164470160	164470259	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:162282781;1allele=C/A;version=Hapmap2;RS=rs801497511;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	164471635	164471734	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162284256;1allele=C/A;version=Hapmap2;RS=rs835276031;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	164548646	164548745	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:162361323;1allele=A/G;version=Hapmap2;RS=rs833255557;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164593390	164593489	.	+	.	Name=Ear_height;B73v2_pos=3:162406100;1allele=A/T;version=Hapmap1;RS=rs132049850;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164612371	164612470	.	+	.	Name=Ear_height;B73v2_pos=3:162429791;1allele=G/A;version=Hapmap2;RS=rs841069328;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	164627576	164627674	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:162433493;1allele=A/G;version=Hapmap2;RS=rs132049796;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164627576	164627674	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:162433493;1allele=A/G;version=Hapmap2;RS=rs132049796;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164631274	164631373	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162437192;1allele=G/C;version=Hapmap1;RS=rs132049827;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	164631499	164631598	.	+	.	Name=Ear_height;B73v2_pos=3:162437417;1allele=A/T;version=Hapmap2;RS=rs805173370;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	164631721	164631820	.	+	.	Name=Ear_height;B73v2_pos=3:162437639;1allele=G/T;version=Hapmap2;RS=rs129435352;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	164632324	164632423	.	+	.	Name=Plant_height;B73v2_pos=3:162438242;1allele=T/C;version=Hapmap2;RS=rs816298876;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164714396	164714495	.	+	.	Name=Starch;B73v2_pos=3:162529115;1allele=C/G;version=Hapmap2;RS=rs810964510;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	164716505	164716604	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:162531224;1allele=C/T;version=Hapmap2;RS=rs727096045;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164718175	164718274	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:162532894;1allele=G/C;version=Hapmap2;RS=rs846687246;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	164719214	164719313	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162533933;1allele=G/A;version=Hapmap2;RS=rs809968013;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	164720253	164720352	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:162534972;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164722133	164722232	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162536852;1allele=G/T;version=Hapmap2;RS=rs821566298;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	164744345	164744444	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:162559067;1allele=G/A;version=Hapmap2;RS=rs129345911;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164753284	164753383	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:162568006;1allele=C/T;version=Hapmap2;RS=rs844892358;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	164780150	164780249	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162597935;1allele=A/G;version=Hapmap2;RS=rs132049919;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	164780528	164780627	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162598313;1allele=C/A;version=Hapmap1;RS=rs725957280;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	164780949	164781048	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162598734;1allele=/CA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164781047	164781146	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162598832;1allele=G/A;version=Hapmap2;RS=rs277197788;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164782377	164782476	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:162600162;1allele=T/-;version=Hapmap1;RS=rs132049963;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164835864	164835963	.	+	.	Name=Ear_height;B73v2_pos=3:162644964;1allele=G/A;version=Hapmap2;RS=rs850262235;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	164873781	164873880	.	+	.	Name=Ear_height;B73v2_pos=3:162682328;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164901606	164901705	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162709983;1allele=G/T;version=Hapmap2;RS=rs821824587;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	164909529	164909628	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:162717908;1allele=A/G;version=Hapmap2;RS=rs804152441;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	164940427	164940526	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162747937;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164952803	164952902	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:162735561;1allele=C/T;version=Hapmap2;RS=rs839687025;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	164964694	164964793	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:162780222;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	164987531	164987630	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:162794587;1allele=A/T;version=Hapmap2;RS=rs801509849;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	164994462	164994561	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:162801518;1allele=A/C;version=Hapmap1;RS=rs129400773;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	165005589	165005688	.	+	.	Name=Ear_height;B73v2_pos=3:162812646;1allele=A/G;version=Hapmap2;RS=rs847753525;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	165005589	165005688	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:162812646;1allele=A/G;version=Hapmap2;RS=rs847753525;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	165005589	165005688	.	+	.	Name=Plant_height;B73v2_pos=3:162812646;1allele=A/G;version=Hapmap2;RS=rs847753525;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	165005617	165005716	.	+	.	Name=Plant_height;B73v2_pos=3:162812674;1allele=A/G;version=Hapmap2;RS=rs807247479;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	165005617	165005716	.	+	.	Name=Ear_height;B73v2_pos=3:162812674;1allele=A/G;version=Hapmap2;RS=rs807247479;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	165029067	165029166	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:162836118;1allele=C/T;version=Hapmap2;RS=rs724733446;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	165029909	165030008	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:162836960;1allele=C/T;version=Hapmap2;RS=rs823888826;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	165156827	165156926	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:162961178;1allele=T/C;version=Hapmap2;RS=rs803775626;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	165180936	165181035	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:162985289;1allele=G/T;version=Hapmap2;RS=rs807198489;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	165201088	165201187	.	+	.	Name=Ear_height;B73v2_pos=3:163030665;1allele=T/C;version=Hapmap2;RS=rs818981631;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	165204515	165204614	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:163035709;1allele=G/T;version=Hapmap1;RS=rs131178535;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	165211883	165211982	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:163008977;1allele=G/T;version=Hapmap2;RS=rs1061898088;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	166813442	166813541	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:163618771;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	166889346	166889445	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:163136913;1allele=T/G;version=Hapmap2;RS=rs825978452;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	168343896	168343995	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:163639065;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	168386310	168386409	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:163655902;1allele=T/C;version=Hapmap2;RS=rs725361716;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	168392547	168392646	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:163662139;1allele=C/T;version=Hapmap2;RS=rs847301175;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	168481287	168481386	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:163743714;1allele=A/G;version=Hapmap2;RS=rs814067895;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	168708213	168708312	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:163994416;1allele=C/T;version=Hapmap2;RS=rs132050284;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	168712361	168712460	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:163998564;1allele=A/G;version=Hapmap2;RS=rs834111143;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	168712424	168712523	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:163998627;1allele=A/G;version=Hapmap2;RS=rs129522041;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	168714056	168714155	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:164000259;1allele=T/C;version=Hapmap2;RS=rs809596941;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	168734977	168735076	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:164021201;1allele=A/T;version=Hapmap2;RS=rs849823331;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	168763868	168763967	.	+	.	Name=Ear_height;B73v2_pos=3:164048798;1allele=T/C;version=Hapmap2;RS=rs806148342;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	168772220	168772319	.	+	.	Name=Stalk_strength;B73v2_pos=3:164057371;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	168790332	168790431	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164062325;1allele=C/T;version=Hapmap2;RS=rs129588798;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	168791333	168791432	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164063326;1allele=C/T;version=Hapmap2;RS=rs1064595900;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	168791748	168791847	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164063741;1allele=A/G;version=Hapmap2;RS=rs277198410;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	168824319	168824418	.	+	.	Name=Ear_height;B73v2_pos=3:164097660;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	168957574	168957673	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:164236549;1allele=C/T;version=Hapmap2;RS=rs817901934;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169009465	169009564	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:164260794;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169087927	169088026	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:164362867;1allele=G/T;version=Hapmap2;RS=rs825052909;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	169148379	169148478	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:164422755;1allele=G/A;version=Hapmap2;RS=rs836830794;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169227987	169228086	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:164502626;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169229612	169229711	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:164504251;1allele=+/-;version=Hapmap2;RS=rs277198545;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169229740	169229839	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:164504379;1allele=G/A;version=Hapmap2;RS=rs811233157;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169229921	169230020	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:164504560;1allele=C/T;version=Hapmap2;RS=rs845906105;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169233712	169233811	.	+	.	Name=Leaf_width;B73v2_pos=3:164508352;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169277862	169277961	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:164583342;1allele=A/T;version=Hapmap2;RS=rs839444769;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	169278570	169278669	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:164584050;1allele=A/T;version=Hapmap2;RS=rs841793102;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	169283842	169283941	.	+	.	Name=Ear_height;B73v2_pos=3:164589261;1allele=A/T;version=Hapmap2;RS=rs838607404;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	169285896	169285995	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:164591315;1allele=G/T;version=Hapmap2;RS=rs811095957;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	169328123	169328221	.	+	.	Name=Ear_height;B73v2_pos=3:164629430;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169328123	169328221	.	+	.	Name=Plant_height;B73v2_pos=3:164629430;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169328171	169328270	.	+	.	Name=Plant_height;B73v2_pos=3:164629479;1allele=A/G;version=Hapmap2;RS=rs841490035;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169411114	169411213	.	+	.	Name=Plant_height;B73v2_pos=3:164710367;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169414642	169414741	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164713895;1allele=C/G;version=Hapmap2;RS=rs813548631;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	169414738	169414837	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164713991;1allele=A/G;version=Hapmap2;RS=rs277198689;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169462753	169462852	.	+	.	Name=Ear_row_number;B73v2_pos=3:164764149;1allele=G/C;version=Hapmap2;RS=rs727363279;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	169575496	169575595	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164889369;1allele=C/T;version=Hapmap2;RS=rs829572051;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169578136	169578235	.	+	.	Name=Leaf_width;B73v2_pos=3:164892004;1allele=T/C;version=Hapmap2;RS=rs817207942;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169578328	169578427	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164892196;1allele=+/-;version=Hapmap2;RS=rs824293181;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	169581832	169581931	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:164895700;1allele=C/T;version=Hapmap2;RS=rs726641985;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169583048	169583147	.	+	.	Name=Starch;B73v2_pos=3:164896916;1allele=C/T;version=Hapmap2;RS=rs129569763;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169641342	169641441	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:164956440;1allele=G/A;version=Hapmap2;RS=rs804519630;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169645096	169645195	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:164960194;1allele=C/T;version=Hapmap2;RS=rs277198811;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169645707	169645806	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:164960805;1allele=C/T;version=Hapmap2;RS=rs827985493;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169645733	169645832	.	+	.	Name=Height_above_ear;B73v2_pos=3:164960831;1allele=G/A;version=Hapmap2;RS=rs813758056;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169645928	169646027	.	+	.	Name=Ear_row_number;B73v2_pos=3:164961026;1allele=C/T;version=Hapmap2;RS=rs831556911;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169647216	169647315	.	+	.	Name=Height_above_ear;B73v2_pos=3:164962314;1allele=T/C;version=Hapmap2;RS=rs839578952;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169648547	169648646	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:164963645;1allele=+/-;version=Hapmap2;RS=rs849223240;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169657467	169657566	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:164972565;1allele=T/C;version=Hapmap2;RS=rs832881261;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169657907	169658006	.	+	.	Name=Height_above_ear;B73v2_pos=3:164973005;1allele=T/A;version=Hapmap2;RS=rs810080512;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	169658923	169659022	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:164974021;1allele=G/C;version=Hapmap2;RS=rs801693351;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	169659419	169659518	.	+	.	Name=Ear_row_number;B73v2_pos=3:164974517;1allele=G/A;version=Hapmap2;RS=rs850240544;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169660595	169660694	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:164975693;1allele=A/G;version=Hapmap2;RS=rs802246238;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169664458	169664557	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:164979556;1allele=A/G;version=Hapmap2;RS=rs132050773;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	169699335	169699434	.	+	.	Name=Plant_height;B73v2_pos=3:165014436;1allele=T/C;version=Hapmap2;RS=rs129318487;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169699968	169700067	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165015069;1allele=A/G;version=Hapmap2;RS=rs843246137;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169700022	169700121	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165015123;1allele=C/T;version=Hapmap2;RS=rs814766378;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169700140	169700239	.	+	.	Name=Plant_height;B73v2_pos=3:165015241;1allele=G/A;version=Hapmap2;RS=rs129423645;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169700376	169700475	.	+	.	Name=Ear_height;B73v2_pos=3:165015477;1allele=G/A;version=Hapmap2;RS=rs823766453;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169704242	169704341	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:165019342;1allele=A/G;version=Hapmap2;RS=rs277198903;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169705817	169705916	.	+	.	Name=Ear_height;B73v2_pos=3:165020917;1allele=T/G;version=Hapmap2;RS=rs726898168;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	169707134	169707233	.	+	.	Name=Ear_row_number;B73v2_pos=3:165022234;1allele=G/A;version=Hapmap1;RS=rs132050885;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169710189	169710288	.	+	.	Name=Leaf_width;B73v2_pos=3:165025289;1allele=C/T;version=Hapmap2;RS=rs277198918;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169710265	169710364	.	+	.	Name=Leaf_width;B73v2_pos=3:165025365;1allele=T/C;version=Hapmap2;RS=rs1060523127;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169710373	169710472	.	+	.	Name=Leaf_width;B73v2_pos=3:165025473;1allele=A/G;version=Hapmap2;RS=rs847728570;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169712412	169712511	.	+	.	Name=Leaf_width;B73v2_pos=3:165027512;1allele=A/G;version=Hapmap1;RS=rs129286618;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169712854	169712953	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:165027954;1allele=C/A;version=Hapmap2;RS=rs1063583024;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	169714463	169714562	.	+	.	Name=Leaf_width;B73v2_pos=3:165029563;1allele=G/C;version=Hapmap1;RS=rs132050945;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	169721109	169721208	.	+	.	Name=Leaf_width;B73v2_pos=3:165036209;1allele=C/T;version=Hapmap2;RS=rs1062439579;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169742666	169742765	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:165057767;1allele=C/T;version=Hapmap2;RS=rs1064175098;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169775133	169775232	.	+	.	Name=Ear_height;B73v2_pos=3:165090235;1allele=T/C;version=Hapmap2;RS=rs839988163;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169788142	169788241	.	+	.	Name=Plant_height;B73v2_pos=3:165116174;1allele=C/T;version=Hapmap2;RS=rs839499247;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169798320	169798419	.	+	.	Name=Leaf_width;B73v2_pos=3:165126353;1allele=A/C;version=Hapmap2;RS=rs1063415610;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	169798355	169798454	.	+	.	Name=Leaf_width;B73v2_pos=3:165126388;1allele=C/T;version=Hapmap2;RS=rs1064161986;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	169798918	169799017	.	+	.	Name=Leaf_width;B73v2_pos=3:165126951;1allele=T/C;version=Hapmap2;RS=rs1061179374;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169799232	169799331	.	+	.	Name=Leaf_width;B73v2_pos=3:165127265;1allele=G/C;version=Hapmap2;RS=rs129401585;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	169799379	169799478	.	+	.	Name=Leaf_width;B73v2_pos=3:165127412;1allele=G/A;version=Hapmap2;RS=rs129347287;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169805198	169805297	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165133231;1allele=C/T;version=Hapmap2;RS=rs848470212;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169806328	169806427	.	+	.	Name=Leaf_width;B73v2_pos=3:165136106;1allele=A/G;version=Hapmap2;RS=rs277199130;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	169806501	169806589	.	+	.	Name=Leaf_width;B73v2_pos=3:165136279;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169807734	169807833	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165134968;1allele=C/T;version=Hapmap2;RS=rs827212047;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169807750	169807849	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165134984;1allele=A/C;version=Hapmap2;RS=rs821413716;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	169807776	169807875	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165135010;1allele=G/T;version=Hapmap2;RS=rs811040892;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	169816281	169816380	.	+	.	Name=Days_to_silk;B73v2_pos=3:165105862;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	169831042	169831141	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165138978;1allele=C/T;version=Hapmap2;RS=rs804449149;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	169831044	169831143	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165138980;1allele=A/G;version=Hapmap2;RS=rs838202031;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169831044	169831143	.	+	.	Name=Leaf_width;B73v2_pos=3:165138980;1allele=A/G;version=Hapmap2;RS=rs838202031;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	169860022	169860121	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165166273;1allele=G/A;version=Hapmap2;RS=rs808777866;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	169861297	169861396	.	+	.	Name=Days_to_silk;B73v2_pos=3:165167548;1allele=G/C;version=Hapmap2;RS=rs806817203;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	169983629	169983728	.	+	.	Name=Leaf_width;B73v2_pos=3:165294992;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170010078	170010177	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165268544;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170015024	170015123	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165263598;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170020239	170020338	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165258383;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170044856	170044955	.	+	.	Name=Leaf_width;B73v2_pos=3:165394063;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170052580	170052679	.	+	.	Name=Leaf_width;B73v2_pos=3:165386337;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170056997	170057095	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165381922;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170058393	170058492	.	+	.	Name=Leaf_width;B73v2_pos=3:165380525;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170059001	170059100	.	+	.	Name=Ear_height;B73v2_pos=3:165379917;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170084746	170084845	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165405878;1allele=G/A;version=Hapmap2;RS=rs830696602;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170085822	170085921	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165406954;1allele=G/A;version=Hapmap2;RS=rs838000917;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170086032	170086131	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165407164;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170087126	170087225	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165408258;1allele=G/T;version=Hapmap2;RS=rs826712871;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	170087156	170087255	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165408288;1allele=T/G;version=Hapmap2;RS=rs822584756;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170088368	170088467	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165409500;1allele=A/G;version=Hapmap2;RS=rs824410864;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170090860	170090959	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:165411992;1allele=G/A;version=Hapmap2;RS=rs132051109;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	170092155	170092254	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:165413287;1allele=ACT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170121874	170121973	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165442568;1allele=A/G;version=Hapmap2;RS=rs825992538;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170123853	170123952	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:165444547;1allele=C/T;version=Hapmap2;RS=rs842580509;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170124187	170124286	.	+	.	Name=Leaf_width;B73v2_pos=3:165444881;1allele=A/G;version=Hapmap2;RS=rs826995401;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170126055	170126154	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165446749;1allele=A/G;version=Hapmap1;RS=rs132051182;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170126268	170126367	.	+	.	Name=Plant_height;B73v2_pos=3:165446962;1allele=C/T;version=Hapmap1;RS=rs129554421;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170126423	170126522	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:165447117;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170132537	170132636	.	+	.	Name=Ear_height;B73v2_pos=3:165453231;1allele=A/G;version=Hapmap2;RS=rs277199346;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170137091	170137190	.	+	.	Name=Plant_height;B73v2_pos=3:165457785;1allele=G/T;version=Hapmap2;RS=rs129504832;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170137467	170137566	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:165458161;1allele=G/T;version=Hapmap2;RS=rs132051308;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	170139438	170139537	.	+	.	Name=Leaf_width;B73v2_pos=3:165460121;1allele=C/G;version=Hapmap1;RS=rs132051340;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	170139531	170139630	.	+	.	Name=Leaf_width;B73v2_pos=3:165460214;1allele=G/A;version=Hapmap2;RS=rs132051347;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170139661	170139760	.	+	.	Name=Leaf_width;B73v2_pos=3:165460344;1allele=T/G;version=Hapmap1;RS=rs132051351;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170140389	170140488	.	+	.	Name=Ear_height;B73v2_pos=3:165461072;1allele=G/T;version=Hapmap1;RS=rs132051364;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	170142806	170142905	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:165463488;1allele=A/T;version=Hapmap2;RS=rs132051438;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	170143070	170143169	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:165463752;1allele=G/A;version=Hapmap1;RS=rs132051444;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170156157	170156256	.	+	.	Name=Fructose;B73v2_pos=3:165476837;1allele=T/G;version=Hapmap2;RS=rs820893612;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170195872	170195971	.	+	.	Name=Ear_height;B73v2_pos=3:165533131;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170203533	170203632	.	+	.	Name=Ear_height;B73v2_pos=3:165545670;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170296130	170296229	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:165612960;1allele=A/G;version=Hapmap2;RS=rs813870751;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170302087	170302186	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:165637500;1allele=3;version=CNV_CNVnator;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170351294	170351393	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:165686678;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170387351	170387450	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:165722825;1allele=T/G;version=Hapmap2;RS=rs806509195;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170390675	170390774	.	+	.	Name=Leaf_width;B73v2_pos=3:165726149;1allele=A/G;version=Hapmap2;RS=rs832831155;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170396009	170396108	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:165731477;1allele=G/C;version=Hapmap2;RS=rs840460403;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	170397418	170397517	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:165732886;1allele=A/G;version=Hapmap2;RS=rs816598339;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170529758	170529857	.	+	.	Name=Nitrate;B73v2_pos=3:165862422;1allele=C/T;version=Hapmap2;RS=rs132051837;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170531590	170531689	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:165864254;1allele=A/G;version=Hapmap1;RS=rs132051893;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170533981	170534080	.	+	.	Name=Stalk_strength;B73v2_pos=3:165866645;1allele=G/T;version=Hapmap2;RS=rs813268696;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	170548014	170548113	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:165880679;1allele=G/A;version=Hapmap2;RS=rs814872918;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170548094	170548193	.	+	.	Name=Ear_row_number;B73v2_pos=3:165880759;1allele=C/T;version=Hapmap2;RS=rs804023196;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170548514	170548613	.	+	.	Name=Ear_row_number;B73v2_pos=3:165881179;1allele=G/A;version=Hapmap2;RS=rs129525008;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170549315	170549414	.	+	.	Name=Ear_row_number;B73v2_pos=3:165881980;1allele=C/T;version=Hapmap2;RS=rs832864832;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170549907	170550006	.	+	.	Name=Ear_row_number;B73v2_pos=3:165882572;1allele=G/T;version=Hapmap2;RS=rs818728646;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	170551900	170551999	.	+	.	Name=Plant_height;B73v2_pos=3:165884565;1allele=C/T;version=Hapmap2;RS=rs832048067;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170551900	170551999	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:165884565;1allele=C/T;version=Hapmap2;RS=rs832048067;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170562096	170562195	.	+	.	Name=Ear_row_number;B73v2_pos=3:165894770;1allele=C/A;version=Hapmap1;RS=rs132051972;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170562664	170562763	.	+	.	Name=Ear_row_number;B73v2_pos=3:165895338;1allele=G/A;version=Hapmap2;RS=rs129559448;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170563133	170563232	.	+	.	Name=Ear_row_number;B73v2_pos=3:165895807;1allele=T/C;version=Hapmap2;RS=rs838403031;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170564174	170564273	.	+	.	Name=Ear_row_number;B73v2_pos=3:165896848;1allele=G/A;version=Hapmap2;RS=rs129541888;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170601602	170601701	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:165934374;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170611515	170611614	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:165962337;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170613412	170613511	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:165960440;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170658191	170658290	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:165993905;1allele=G/A;version=Hapmap2;RS=rs843273494;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170669481	170669580	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:166005195;1allele=T/C;version=Hapmap2;RS=rs816040869;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170676210	170676309	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:166011912;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170699669	170699768	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:166035371;1allele=C/T;version=Hapmap2;RS=rs822295414;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170699832	170699931	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:166035534;1allele=C/T;version=Hapmap2;RS=rs816022852;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170699884	170699983	.	+	.	Name=Ear_row_number;B73v2_pos=3:166035586;1allele=C/T;version=Hapmap2;RS=rs833695801;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170741498	170741597	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:166077941;1allele=T/C;version=Hapmap2;RS=rs835662111;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170742055	170742154	.	+	.	Name=Plant_height;B73v2_pos=3:166078498;1allele=T/C;version=Hapmap2;RS=rs835943486;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170742055	170742154	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166078498;1allele=T/C;version=Hapmap2;RS=rs835943486;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170742055	170742154	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:166078498;1allele=T/C;version=Hapmap2;RS=rs835943486;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170754431	170754530	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:166090876;1allele=T/A;version=Hapmap2;RS=rs869400922;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	170815450	170815549	.	+	.	Name=Ear_height;B73v2_pos=3:166151478;1allele=T/G;version=Hapmap2;RS=rs129385416;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170818098	170818197	.	+	.	Name=Plant_height;B73v2_pos=3:166154123;1allele=A/G;version=Hapmap2;RS=rs846500009;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170818976	170819075	.	+	.	Name=Plant_height;B73v2_pos=3:166155001;1allele=/GCTCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170819081	170819180	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166155106;1allele=T/A;version=Hapmap2;RS=rs818346565;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	170819115	170819214	.	+	.	Name=Plant_height;B73v2_pos=3:166155140;1allele=A/G;version=Hapmap2;RS=rs277200679;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170819115	170819214	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166155140;1allele=A/G;version=Hapmap2;RS=rs277200679;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170819115	170819214	.	+	.	Name=Ear_height;B73v2_pos=3:166155140;1allele=A/G;version=Hapmap2;RS=rs277200679;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170819202	170819301	.	+	.	Name=Plant_height;B73v2_pos=3:166155227;1allele=G/C;version=Hapmap2;RS=rs129422700;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	170819261	170819360	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166155286;1allele=C/T;version=Hapmap2;RS=rs277200682;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170819677	170819776	.	+	.	Name=Ear_height;B73v2_pos=3:166155702;1allele=A/G;version=Hapmap2;RS=rs277200691;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	170819748	170819847	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:166155773;1allele=C/T;version=Hapmap2;RS=rs806587935;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170820394	170820493	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166156419;1allele=C/T;version=Hapmap2;RS=rs129421983;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170852773	170852872	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166181139;1allele=C/T;version=Hapmap1;RS=rs132052228;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	170874658	170874757	.	+	.	Name=Leaf_width;B73v2_pos=3:166203024;1allele=/CGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170876062	170876161	.	+	.	Name=Plant_height;B73v2_pos=3:166204428;1allele=T/G;version=Hapmap2;RS=rs836385990;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170876401	170876500	.	+	.	Name=Leaf_width;B73v2_pos=3:166204767;1allele=G/T;version=Hapmap2;RS=rs803876965;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	170877558	170877657	.	+	.	Name=Ear_height;B73v2_pos=3:166205924;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	170914732	170914831	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166243443;1allele=T/C;version=Hapmap2;RS=rs824793725;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	170917572	170917671	.	+	.	Name=Plant_height;B73v2_pos=3:166246283;1allele=A/G;version=Hapmap2;RS=rs277200802;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	170918035	170918134	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:166246746;1allele=G/C;version=Hapmap2;RS=rs839752041;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	170925351	170925450	.	+	.	Name=Plant_height;B73v2_pos=3:166254062;1allele=C/A;version=Hapmap2;RS=rs804307895;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	171010864	171010963	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166340253;1allele=G/A;version=Hapmap2;RS=rs802217989;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	171016915	171017014	.	+	.	Name=Ear_height;B73v2_pos=3:166346304;1allele=A/G;version=Hapmap2;RS=rs848241414;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	171026230	171026329	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:166355618;1allele=G/A;version=Hapmap2;RS=rs812856066;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	171026259	171026358	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:166355647;1allele=G/A;version=Hapmap2;RS=rs805287344;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	171053406	171053505	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:166382597;1allele=C/T;version=Hapmap2;RS=rs277201107;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	171055616	171055715	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:166384807;1allele=G/T;version=Hapmap2;RS=rs129597895;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	171059381	171059480	.	+	.	Name=Ear_height;B73v2_pos=3:166388572;1allele=A/T;version=Hapmap2;RS=rs823548713;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	171063233	171063332	.	+	.	Name=Plant_height;B73v2_pos=3:166392424;1allele=C/A;version=Hapmap2;RS=rs129438597;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	171064704	171064803	.	+	.	Name=Plant_height;B73v2_pos=3:166393895;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	171064717	171064816	.	+	.	Name=Plant_height;B73v2_pos=3:166393908;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	171064776	171064875	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166393967;1allele=A/T;version=Hapmap2;RS=rs831956264;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	171064776	171064875	.	+	.	Name=Plant_height;B73v2_pos=3:166393967;1allele=A/T;version=Hapmap2;RS=rs831956264;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	171065497	171065596	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166394689;1allele=A/G;version=Hapmap2;RS=rs1064399434;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	171065564	171065663	.	+	.	Name=Plant_height;B73v2_pos=3:166394756;1allele=C/T;version=Hapmap2;RS=rs129463370;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	171065689	171065788	.	+	.	Name=Plant_height;B73v2_pos=3:166394881;1allele=T/C;version=Hapmap2;RS=rs277201219;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	171092068	171092167	.	+	.	Name=Plant_height;B73v2_pos=3:166421407;1allele=C/G;version=Hapmap2;RS=rs805599909;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	171092068	171092167	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166421407;1allele=C/G;version=Hapmap2;RS=rs805599909;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	171092997	171093096	.	+	.	Name=Ear_height;B73v2_pos=3:166422336;1allele=A/G;version=Hapmap2;RS=rs838796141;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	171095507	171095606	.	+	.	Name=Plant_height;B73v2_pos=3:166424765;1allele=CGCGCT/;version=Hapmap1;RS=rs132052522;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	171099360	171099459	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166429418;1allele=C/A;version=Hapmap2;RS=rs277201268;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	171099931	171100030	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166429988;1allele=A/C;version=Hapmap2;RS=rs277201273;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	171100019	171100118	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166430076;1allele=A/G;version=Hapmap1;RS=rs132052539;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	171100296	171100395	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:166430353;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	171104425	171104524	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:166434482;1allele=T/C;version=Hapmap2;RS=rs724478131;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	171117623	171117722	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:166447682;1allele=C/A;version=Hapmap2;RS=rs834846843;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	171117623	171117722	.	+	.	Name=Plant_height;B73v2_pos=3:166447682;1allele=C/A;version=Hapmap2;RS=rs834846843;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	171117623	171117722	.	+	.	Name=Ear_height;B73v2_pos=3:166447682;1allele=C/A;version=Hapmap2;RS=rs834846843;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	171117787	171117886	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:166447846;1allele=T/A;version=Hapmap2;RS=rs132052621;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	171120062	171120161	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166450120;1allele=T/C;version=Hapmap2;RS=rs847443586;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	171122369	171122468	.	+	.	Name=Ear_row_number;B73v2_pos=3:166452427;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	171130260	171130359	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:166460319;1allele=T/C;version=Hapmap1;RS=rs129441668;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	171139843	171139938	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:166478503;1allele=A/G;version=Hapmap2;RS=rs842967472;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	171143809	171143908	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:166475501;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	171179438	171179537	.	+	.	Name=Leaf_width;B73v2_pos=3:166486129;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	171288016	171288115	.	+	.	Name=Ear_height;B73v2_pos=3:166598104;1allele=G/C;version=Hapmap2;RS=rs132052817;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	171295223	171295322	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:166605312;1allele=C/G;version=Hapmap2;RS=rs830861851;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	171309532	171309631	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:166628457;1allele=G/C;version=Hapmap2;RS=rs831063423;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	171309541	171309640	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:166628466;1allele=C/T;version=Hapmap2;RS=rs277201488;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	171311633	171311732	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:166630558;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	171381428	171381527	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:166692738;1allele=A/T;version=Hapmap2;RS=rs835968751;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	171382773	171382872	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:166694083;1allele=C/T;version=Hapmap2;RS=rs132053020;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	171420867	171420966	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:166745520;1allele=C/T;version=Hapmap2;RS=rs832921013;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	171443240	171443339	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:166767924;1allele=T/C;version=Hapmap2;RS=rs815653427;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	171446026	171446125	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:166770710;1allele=A/T;version=Hapmap2;RS=rs802082750;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	171482234	171482333	.	+	.	Name=Ear_row_number;B73v2_pos=3:166794200;1allele=C/A;version=Hapmap2;RS=rs820466710;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	171686276	171686375	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:166998500;1allele=G/A;version=Hapmap2;RS=rs805481708;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	171689750	171689849	.	+	.	Name=Ear_row_number;B73v2_pos=3:167001974;1allele=G/T;version=Hapmap2;RS=rs846105368;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	171760165	171760264	.	+	.	Name=Ear_row_number;B73v2_pos=3:167072314;1allele=C/T;version=Hapmap2;RS=rs807892369;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	171858292	171858391	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:167183488;1allele=C/T;version=Hapmap2;RS=rs804871094;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	172059990	172060089	.	+	.	Name=Ear_row_number;B73v2_pos=3:167364742;1allele=C/T;version=Hapmap1;RS=rs132053736;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	172065664	172065763	.	+	.	Name=Ear_row_number;B73v2_pos=3:167370416;1allele=C/T;version=Hapmap2;RS=rs826122668;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	172137167	172137266	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:167442568;1allele=C/T;version=Hapmap2;RS=rs849521486;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	172188903	172189002	.	+	.	Name=Fructose;B73v2_pos=3:167494536;1allele=A/G;version=Hapmap2;RS=rs822960581;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	172194595	172194694	.	+	.	Name=Stalk_strength;B73v2_pos=3:167500229;1allele=C/T;version=Hapmap2;RS=rs813917894;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	172231738	172231837	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:167537789;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	172304757	172304856	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:167685822;1allele=A/C;version=Hapmap2;RS=rs132054182;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	172310797	172310896	.	+	.	Name=Ear_height;B73v2_pos=3:167691862;1allele=A/G;version=Hapmap2;RS=rs129530613;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	172386888	172386987	.	+	.	Name=Ear_height;B73v2_pos=3:167768255;1allele=C/A;version=Hapmap2;RS=rs817195448;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	172405740	172405839	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:167787108;1allele=G/A;version=Hapmap2;RS=rs831143536;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	172409923	172410022	.	+	.	Name=Stalk_strength;B73v2_pos=3:167791291;1allele=G/C;version=Hapmap2;RS=rs836517898;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	172422605	172422704	.	+	.	Name=Ear_row_number;B73v2_pos=3:167803974;1allele=G/A;version=Hapmap2;RS=rs277203536;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	172425001	172425100	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:167806370;1allele=G/T;version=Hapmap2;RS=rs277203561;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	172560019	172560118	.	+	.	Name=Ear_row_number;B73v2_pos=3:167941397;1allele=C/A;version=Hapmap2;RS=rs277203704;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	172569455	172569554	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:167950833;1allele=T/C;version=Hapmap2;RS=rs822687824;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	172616174	172616273	.	+	.	Name=Plant_height;B73v2_pos=3:167997563;1allele=G/A;version=Hapmap2;RS=rs1061948878;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	172646906	172647005	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:168028298;1allele=C/T;version=Hapmap2;RS=rs277203955;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	172676763	172676862	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:168055043;1allele=G/A;version=Hapmap2;RS=rs726760961;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	172971598	172971697	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:168368641;1allele=C/T;version=Hapmap2;RS=rs129343569;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	172975739	172975838	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:168372782;1allele=C/T;version=Hapmap2;RS=rs822725257;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173029807	173029906	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:168429651;1allele=A/G;version=Hapmap2;RS=rs277204822;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173077763	173077862	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168479500;1allele=T/C;version=Hapmap2;RS=rs841048136;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173082546	173082645	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:168484283;1allele=G/C;version=Hapmap2;RS=rs277204947;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	173083927	173084026	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:168485664;1allele=T/G;version=Hapmap2;RS=rs846418883;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	173084429	173084528	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:168486166;1allele=A/T;version=Hapmap2;RS=rs834098974;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	173085191	173085290	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:168486928;1allele=C/T;version=Hapmap2;RS=rs132054580;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173087671	173087770	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:168489408;1allele=C/A;version=Hapmap2;RS=rs803828981;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173088189	173088288	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168489926;1allele=G/A;version=Hapmap2;RS=rs811004950;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173088472	173088571	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:168490209;1allele=C/G;version=Hapmap2;RS=rs819869969;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	173094536	173094635	.	+	.	Name=Leaf_width;B73v2_pos=3:168496273;1allele=T/C;version=Hapmap2;RS=rs837330350;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173100517	173100616	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:168525757;1allele=C/T;version=Hapmap2;RS=rs129572039;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173201453	173201552	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:168600202;1allele=G/A;version=Hapmap2;RS=rs813340773;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173225579	173225678	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:168624333;1allele=C/T;version=Hapmap2;RS=rs724603046;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173298876	173298975	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168697800;1allele=G/T;version=Hapmap2;RS=rs132054732;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	173299662	173299761	.	+	.	Name=Leaf_width;B73v2_pos=3:168698586;1allele=G/A;version=Hapmap2;RS=rs131176427;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173319907	173320006	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:168718837;1allele=C/T;version=Hapmap2;RS=rs807371592;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173348450	173348549	.	+	.	Name=Stalk_strength;B73v2_pos=3:168737917;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173354194	173354293	.	+	.	Name=Leaf_width;B73v2_pos=3:168743661;1allele=C/A;version=Hapmap2;RS=rs834051937;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	173354324	173354423	.	+	.	Name=Leaf_width;B73v2_pos=3:168743791;1allele=A/G;version=Hapmap2;RS=rs809740216;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173354815	173354914	.	+	.	Name=Leaf_width;B73v2_pos=3:168744282;1allele=A/G;version=Hapmap2;RS=rs277205358;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173367733	173367832	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168757199;1allele=G/A;version=Hapmap2;RS=rs819681478;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173381242	173381341	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:168770709;1allele=T/C;version=Hapmap2;RS=rs806115219;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173425343	173425442	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168796776;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173472466	173472565	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168858940;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173475873	173475972	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:168862347;1allele=C/T;version=Hapmap1;RS=rs132054847;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173483998	173484097	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:168870472;1allele=T/C;version=Hapmap2;RS=rs129553875;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173487884	173487983	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:168874358;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173499180	173499279	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168885655;1allele=G/A;version=Hapmap2;RS=rs804024223;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173507675	173507774	.	+	.	Name=Stalk_strength;B73v2_pos=3:168893462;1allele=G/C;version=Hapmap2;RS=rs821668031;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	173514740	173514839	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:168900527;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173528162	173528261	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:168913949;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173533281	173533380	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:168919068;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173533350	173533449	.	+	.	Name=Plant_height;B73v2_pos=3:168919137;1allele=A/G;version=Hapmap2;RS=rs277205666;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173533350	173533449	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:168919137;1allele=A/G;version=Hapmap2;RS=rs277205666;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173572696	173572795	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:168958141;1allele=G/A;version=Hapmap1;RS=rs132054937;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173575159	173575258	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:168960598;1allele=C/A;version=Hapmap1;RS=rs129461959;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	173594869	173594968	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168980309;1allele=A/G;version=Hapmap2;RS=rs849438698;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173597415	173597514	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168982855;1allele=A/G;version=Hapmap2;RS=rs821529395;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173604931	173605030	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:168990368;1allele=C/A;version=Hapmap2;RS=rs802323224;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	173617571	173617670	.	+	.	Name=Stalk_strength;B73v2_pos=3:169003051;1allele=G/A;version=Hapmap2;RS=rs129580203;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	173647824	173647923	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:169031490;1allele=T/C;version=Hapmap1;RS=rs132055035;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173658056	173658155	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:169043032;1allele=A/C;version=Hapmap2;RS=rs841075254;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	173658773	173658872	.	+	.	Name=Plant_height;B73v2_pos=3:169043749;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173659283	173659382	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:169044259;1allele=A/T;version=Hapmap2;RS=rs726445981;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	173659283	173659382	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:169044259;1allele=A/T;version=Hapmap2;RS=rs726445981;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	173659586	173659685	.	+	.	Name=Ear_row_number;B73v2_pos=3:169044562;1allele=A/G;version=Hapmap2;RS=rs129348315;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	173659586	173659685	.	+	.	Name=Plant_height;B73v2_pos=3:169044562;1allele=A/G;version=Hapmap2;RS=rs129348315;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	173659597	173659696	.	+	.	Name=Plant_height;B73v2_pos=3:169044573;1allele=A/C;version=Hapmap2;RS=rs129360481;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	173660167	173660266	.	+	.	Name=Ear_height;B73v2_pos=3:169045143;1allele=T/C;version=Hapmap2;RS=rs845886957;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173660175	173660274	.	+	.	Name=Plant_height;B73v2_pos=3:169045151;1allele=C/A;version=Hapmap2;RS=rs129482881;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	173660316	173660415	.	+	.	Name=Ear_height;B73v2_pos=3:169045292;1allele=A/G;version=Hapmap1;RS=rs831885187;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173721637	173721736	.	+	.	Name=Ear_height;B73v2_pos=3:169106562;1allele=T/C;version=Hapmap2;RS=rs836153536;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173754080	173754179	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:169139011;1allele=T/A;version=Hapmap2;RS=rs829379518;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	173754518	173754617	.	+	.	Name=Plant_height;B73v2_pos=3:169139449;1allele=A/G;version=Hapmap2;RS=rs847754054;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173755639	173755738	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:169140570;1allele=C/T;version=Hapmap2;RS=rs825594647;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173756237	173756336	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:169141168;1allele=C/A;version=Hapmap2;RS=rs277205898;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	173836660	173836759	.	+	.	Name=Ear_row_number;B73v2_pos=3:169214695;1allele=C/T;version=Hapmap2;RS=rs132055310;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173838992	173839091	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:169217027;1allele=T/C;version=Hapmap1;RS=rs132055356;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173839485	173839584	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169217520;1allele=/AGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	173914742	173914841	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:169291816;1allele=T/C;version=Hapmap1;RS=rs132055463;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	173922421	173922520	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169299495;1allele=C/T;version=Hapmap2;RS=rs814149058;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	173940353	173940452	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169317428;1allele=T/A;version=Hapmap2;RS=rs846839439;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	173943119	173943218	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169320194;1allele=A/G;version=Hapmap2;RS=rs805092593;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173954757	173954856	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:169331835;1allele=A/G;version=Hapmap2;RS=rs1061435489;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	173978234	173978333	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:169355313;1allele=A/G;version=Hapmap2;RS=rs827455561;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174007524	174007623	.	+	.	Name=Ear_row_number;B73v2_pos=3:169384080;1allele=A/G;version=Hapmap2;RS=rs1064315110;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174053714	174053813	.	+	.	Name=Ear_row_number;B73v2_pos=3:169416390;1allele=C/T;version=Hapmap2;RS=rs807743855;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	174147687	174147786	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169520314;1allele=T/C;version=Hapmap2;RS=rs129305497;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	174147751	174147850	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169520378;1allele=A/G;version=Hapmap2;RS=rs129464736;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174198574	174198673	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169572242;1allele=G/A;version=Hapmap2;RS=rs831714617;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	174203803	174203902	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169577471;1allele=C/T;version=Hapmap2;RS=rs129373483;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	174214641	174214740	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:169588309;1allele=G/A;version=Hapmap2;RS=rs129424911;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174338633	174338732	.	+	.	Name=Stalk_strength;B73v2_pos=3:169700992;1allele=A/G;version=Hapmap2;RS=rs826030478;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174351448	174351547	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:169713805;1allele=C/T;version=Hapmap2;RS=rs132055668;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	174362761	174362860	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:169725118;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	174374199	174374298	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:169736556;1allele=G/A;version=Hapmap2;RS=rs806905848;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	174428123	174428222	.	+	.	Name=Ear_height;B73v2_pos=3:169802084;1allele=C/A;version=Hapmap2;RS=rs808410980;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	174500273	174500372	.	+	.	Name=Stalk_strength;B73v2_pos=3:169873337;1allele=T/A;version=Hapmap2;RS=rs132055928;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	174503190	174503289	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:169876254;1allele=A/T;version=Hapmap2;RS=rs724871585;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	174504650	174504749	.	+	.	Name=Stalk_strength;B73v2_pos=3:169877714;1allele=+/-;version=Hapmap2;RS=rs816098696;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174552553	174552652	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:169925620;1allele=A/G;version=Hapmap2;RS=rs1062417666;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174644185	174644284	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:170023078;1allele=G/A;version=Hapmap1;RS=rs132056035;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	174644333	174644432	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:170023226;1allele=/CACTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	174730597	174730696	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:170105191;1allele=A/G;version=Hapmap2;RS=rs277207085;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174739391	174739490	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:170113985;1allele=A/G;version=Hapmap2;RS=rs817611116;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	174739391	174739490	.	+	.	Name=Plant_height;B73v2_pos=3:170113985;1allele=A/G;version=Hapmap2;RS=rs817611116;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	174739700	174739799	.	+	.	Name=Leaf_width;B73v2_pos=3:170114294;1allele=A/T;version=Hapmap2;RS=rs836247353;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	174860958	174861057	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:170226146;1allele=A/G;version=Hapmap2;RS=rs818963438;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174881624	174881723	.	+	.	Name=Stalk_strength;B73v2_pos=3:170246818;1allele=A/T;version=Hapmap2;RS=rs277207384;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	174916925	174917024	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:170282668;1allele=A/G;version=Hapmap2;RS=rs838707123;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	174917589	174917688	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:170283332;1allele=T/C;version=Hapmap2;RS=rs850037207;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	175003757	175003856	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:170369508;1allele=G/T;version=Hapmap2;RS=rs807888576;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	175009755	175009854	.	+	.	Name=Height_above_ear;B73v2_pos=3:170375506;1allele=C/T;version=Hapmap2;RS=rs819472297;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	175071811	175071910	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:170437130;1allele=C/T;version=Hapmap2;RS=rs846019218;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	175073787	175073886	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:170439107;1allele=A/C;version=Hapmap2;RS=rs811939867;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	175093777	175093876	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:170457342;1allele=G/C;version=Hapmap2;RS=rs820079084;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	175104848	175104947	.	+	.	Name=Fructose;B73v2_pos=3:170468583;1allele=C/T;version=Hapmap2;RS=rs725494707;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	175131442	175131541	.	+	.	Name=Leaf_width;B73v2_pos=3:170494982;1allele=T/C;version=Hapmap2;RS=rs132056944;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	175178224	175178323	.	+	.	Name=Stalk_strength;B73v2_pos=3:170541211;1allele=T/A;version=Hapmap2;RS=rs839826222;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	175178660	175178759	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:170541647;1allele=C/A;version=Hapmap2;RS=rs129322514;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	175252022	175252121	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:170614827;1allele=A/T;version=Hapmap2;RS=rs809961949;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	175252070	175252169	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:170614875;1allele=G/A;version=Hapmap2;RS=rs831495514;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	175263203	175263302	.	+	.	Name=Stalk_strength;B73v2_pos=3:170626008;1allele=T/C;version=Hapmap2;RS=rs843772939;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	175273475	175273574	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:170636280;1allele=G/A;version=Hapmap2;RS=rs836360019;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	175304840	175304939	.	+	.	Name=Leaf_width;B73v2_pos=3:170667653;1allele=A/G;version=Hapmap2;RS=rs849117175;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	175319501	175319600	.	+	.	Name=Leaf_width;B73v2_pos=3:170682314;1allele=G/A;version=Hapmap2;RS=rs129348666;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	175338729	175338828	.	+	.	Name=Leaf_width;B73v2_pos=3:170700692;1allele=G/T;version=Hapmap2;RS=rs725845085;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	175408609	175408708	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:170770409;1allele=A/G;version=Hapmap2;RS=rs807281923;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	175416510	175416609	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:170778310;1allele=T/C;version=Hapmap1;RS=rs129470022;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	175416545	175416644	.	+	.	Name=Leaf_width;B73v2_pos=3:170778345;1allele=C/T;version=Hapmap2;RS=rs132057180;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	175416983	175417082	.	+	.	Name=Leaf_width;B73v2_pos=3:170778783;1allele=T/C;version=Hapmap2;RS=rs848665922;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	175444785	175444884	.	+	.	Name=Leaf_width;B73v2_pos=3:170826803;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	175460736	175460835	.	+	.	Name=Ear_row_number;B73v2_pos=3:170810989;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	175552611	175552710	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:170902777;1allele=T/A;version=Hapmap2;RS=rs277208171;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	175559584	175559683	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:170909752;1allele=G/A;version=Hapmap2;RS=rs848050808;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	175559818	175559917	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:170909986;1allele=A/C;version=Hapmap2;RS=rs842276987;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	175559943	175560042	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:170910111;1allele=G/A;version=Hapmap2;RS=rs803695653;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	175674802	175674901	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:171031263;1allele=G/C;version=Hapmap2;RS=rs129465047;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	175731966	175732065	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:171088446;1allele=G/C;version=Hapmap2;RS=rs1063713288;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	175753345	175753444	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:171119520;1allele=G/A;version=Hapmap2;RS=rs1063732628;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	175754951	175755050	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:171121126;1allele=C/T;version=Hapmap2;RS=rs129382728;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	175857104	175857203	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:171212508;1allele=G/A;version=Hapmap2;RS=rs831374668;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	176078460	176078559	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:171431556;1allele=T/C;version=Hapmap2;RS=rs822572973;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	176079417	176079516	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:171432513;1allele=G/T;version=Hapmap2;RS=rs277208661;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	176086216	176086315	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:171439312;1allele=G/A;version=Hapmap2;RS=rs822217566;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	176088756	176088855	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:171441853;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176095234	176095333	.	+	.	Name=Leaf_width;B73v2_pos=3:171448331;1allele=C/T;version=Hapmap1;RS=rs132057809;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	176203385	176203484	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:171547827;1allele=A/G;version=Hapmap2;RS=rs834117115;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	176268638	176268737	.	+	.	Name=Total_amino_acids;B73v2_pos=3:171613505;1allele=C/T;version=Hapmap2;RS=rs807937813;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	176296471	176296570	.	+	.	Name=Total_amino_acids;B73v2_pos=3:171637990;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176364893	176364992	.	+	.	Name=Fructose;B73v2_pos=3:171713178;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176375605	176375704	.	+	.	Name=Leaf_width;B73v2_pos=3:171723890;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176397941	176398040	.	+	.	Name=Fructose;B73v2_pos=3:171748468;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176397941	176398040	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:171748468;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176402947	176403046	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:171753474;1allele=/AGTACC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176404462	176404561	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:171754989;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176420160	176420259	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:171770687;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176426923	176427022	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:171777450;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176447141	176447240	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:171798121;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176463389	176463488	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:171813977;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176463436	176463535	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:171814024;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176643316	176643415	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:171979215;1allele=A/G;version=Hapmap2;RS=rs817552241;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	176648279	176648378	.	+	.	Name=Height_above_ear;B73v2_pos=3:171984178;1allele=C/T;version=Hapmap2;RS=rs837948427;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	176772554	176772653	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:172100661;1allele=C/A;version=Hapmap2;RS=rs839935729;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	176791641	176791740	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:172128850;1allele=/ACC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	176860355	176860454	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172197573;1allele=A/C;version=Hapmap2;RS=rs129530100;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	176862277	176862376	.	+	.	Name=Height_above_ear;B73v2_pos=3:172199495;1allele=C/G;version=Hapmap2;RS=rs132058595;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	176863468	176863567	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:172200686;1allele=T/A;version=Hapmap2;RS=rs129577639;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	176864875	176864974	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172202093;1allele=T/C;version=Hapmap2;RS=rs805245113;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	176973114	176973213	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:172308245;1allele=C/T;version=Hapmap2;RS=rs823198468;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	176973114	176973213	.	+	.	Name=Fructose;B73v2_pos=3:172308245;1allele=C/T;version=Hapmap2;RS=rs823198468;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	176982893	176982992	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:172318025;1allele=G/A;version=Hapmap2;RS=rs824023317;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	176984342	176984441	.	+	.	Name=Fructose;B73v2_pos=3:172319474;1allele=C/T;version=Hapmap2;RS=rs804707591;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	177005670	177005769	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:172340804;1allele=G/A;version=Hapmap2;RS=rs277209626;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177005994	177006093	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:172341128;1allele=A/G;version=Hapmap2;RS=rs277209631;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	177008327	177008426	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:172343461;1allele=G/A;version=Hapmap2;RS=rs822603460;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177008327	177008426	.	+	.	Name=Fructose;B73v2_pos=3:172343461;1allele=G/A;version=Hapmap2;RS=rs822603460;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177011974	177012073	.	+	.	Name=Ear_row_number;B73v2_pos=3:172347108;1allele=C/A;version=Hapmap2;RS=rs839879660;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	177031146	177031245	.	+	.	Name=Fructose;B73v2_pos=3:172366243;1allele=C/T;version=Hapmap2;RS=rs838041786;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	177032563	177032662	.	+	.	Name=Fructose;B73v2_pos=3:172367661;1allele=-/+;version=Hapmap2;RS=rs826600544;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177033403	177033502	.	+	.	Name=Leaf_width;B73v2_pos=3:172368501;1allele=C/G;version=Hapmap2;RS=rs277209679;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	177033474	177033573	.	+	.	Name=Fructose;B73v2_pos=3:172368572;1allele=T/G;version=Hapmap2;RS=rs812837950;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	177034167	177034266	.	+	.	Name=Fructose;B73v2_pos=3:172369265;1allele=C/T;version=Hapmap2;RS=rs815816977;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	177041717	177041816	.	+	.	Name=Fructose;B73v2_pos=3:172376815;1allele=T/C;version=Hapmap2;RS=rs812059828;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	177045941	177046040	.	+	.	Name=Fructose;B73v2_pos=3:172381039;1allele=T/C;version=Hapmap1;RS=rs132058991;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	177051153	177051251	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:172386254;1allele=G/A;version=Hapmap2;RS=rs837756798;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177059776	177059875	.	+	.	Name=Height_above_ear;B73v2_pos=3:172385217;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	177109126	177109225	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:172440600;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	177112106	177112205	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:172443580;1allele=C/G;version=Hapmap1;RS=rs132059135;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	177113739	177113838	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:172445213;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	177188357	177188456	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:172519738;1allele=A/T;version=Hapmap2;RS=rs844257069;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	177220994	177221093	.	+	.	Name=Fructose;B73v2_pos=3:172551951;1allele=T/C;version=Hapmap2;RS=rs833226615;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	177267108	177267207	.	+	.	Name=Fructose;B73v2_pos=3:172597662;1allele=T/G;version=Hapmap2;RS=rs821707002;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	177291639	177291738	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:172621030;1allele=G/A;version=Hapmap2;RS=rs816024074;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177291970	177292069	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:172621361;1allele=C/T;version=Hapmap2;RS=rs727414789;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	177292123	177292222	.	+	.	Name=Fructose;B73v2_pos=3:172621514;1allele=G/C;version=Hapmap2;RS=rs836097310;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	177294626	177294725	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:172624017;1allele=G/C;version=Hapmap2;RS=rs725852969;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	177299251	177299350	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:172628642;1allele=G/A;version=Hapmap2;RS=rs846704590;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177341589	177341688	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172671957;1allele=G/A;version=Hapmap2;RS=rs846858600;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177406995	177407094	.	+	.	Name=Fructose;B73v2_pos=3:172737752;1allele=G/T;version=Hapmap2;RS=rs832327498;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	177563588	177563687	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172854736;1allele=T/C;version=Hapmap1;RS=rs132059530;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	177563696	177563795	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172854844;1allele=G/T;version=Hapmap2;RS=rs129532769;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	177570673	177570772	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172861821;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	177571158	177571257	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172862306;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	177591945	177592044	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:172921004;1allele=T/G;version=Hapmap2;RS=rs832837299;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	177598796	177598895	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172927855;1allele=C/A;version=Hapmap1;RS=rs277210135;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	177634883	177634982	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172963883;1allele=A/G;version=Hapmap2;RS=rs1060627077;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	177638131	177638230	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:172967130;1allele=C/T;version=Hapmap2;RS=rs1063518370;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	177694129	177694228	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:173005959;1allele=T/C;version=Hapmap2;RS=rs822280021;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	177701951	177702050	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:173015112;1allele=T/C;version=Hapmap2;RS=rs129358799;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	177706365	177706464	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:173019526;1allele=A/C;version=Hapmap1;RS=rs132059717;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	177838652	177838751	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:173152780;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	177938514	177938613	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:173251780;1allele=C/T;version=Hapmap2;RS=rs836652703;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	177941606	177941705	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:173254978;1allele=A/G;version=Hapmap2;RS=rs839877503;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	177942538	177942637	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:173255910;1allele=C/A;version=Hapmap2;RS=rs822181615;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	177979934	177980033	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:173293537;1allele=A/T;version=Hapmap2;RS=rs825597993;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	178169590	178169689	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:173472307;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	178171558	178171657	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:173474275;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	178198829	178198928	.	+	.	Name=Fructose;B73v2_pos=3:173501871;1allele=G/C;version=Hapmap2;RS=rs129311675;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	178213519	178213618	.	+	.	Name=Days_to_silk;B73v2_pos=3:173516563;1allele=G/C;version=Hapmap2;RS=rs129427422;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	178218357	178218456	.	+	.	Name=Fructose;B73v2_pos=3:173521401;1allele=G/T;version=Hapmap2;RS=rs132060425;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	178268926	178269025	.	+	.	Name=Fructose;B73v2_pos=3:173574168;1allele=A/G;version=Hapmap2;RS=rs804962855;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	178269840	178269939	.	+	.	Name=Fructose;B73v2_pos=3:173575082;1allele=A/T;version=Hapmap2;RS=rs808561460;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	178291763	178291862	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:173589340;1allele=C/A;version=Hapmap2;RS=rs811988628;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	178293763	178293862	.	+	.	Name=Fructose;B73v2_pos=3:173591340;1allele=C/T;version=Hapmap2;RS=rs811085950;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	178293763	178293862	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:173591340;1allele=C/T;version=Hapmap2;RS=rs811085950;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	178367027	178367126	.	+	.	Name=Days_to_silk;B73v2_pos=3:173650960;1allele=A/G;version=Hapmap2;RS=rs840805544;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	178367402	178367501	.	+	.	Name=Days_to_silk;B73v2_pos=3:173651335;1allele=G/A;version=Hapmap2;RS=rs277211100;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	178589733	178589832	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:173871540;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	178772930	178773029	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:174071678;1allele=C/T;version=Hapmap2;RS=rs845740314;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	179083224	179083323	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174371062;1allele=T/A;version=Hapmap2;RS=rs132060989;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	179084754	179084853	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174372592;1allele=T/C;version=Hapmap2;RS=rs816706081;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	179138761	179138860	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174425430;1allele=T/G;version=Hapmap2;RS=rs129386700;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	179138855	179138954	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174425524;1allele=C/A;version=Hapmap2;RS=rs843208125;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	179138938	179139037	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174425607;1allele=T/C;version=Hapmap2;RS=rs817340075;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	179169848	179169947	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174459949;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179226256	179226355	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174499630;1allele=G/A;version=Hapmap2;RS=rs817402485;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	179255266	179255365	.	+	.	Name=Days_to_silk;B73v2_pos=3:174528641;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179255266	179255365	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:174528641;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179255984	179256083	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174529359;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179256013	179256112	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:174529388;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179256969	179257068	.	+	.	Name=Days_to_silk;B73v2_pos=3:174530344;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179267029	179267128	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174540404;1allele=A/G;version=Hapmap2;RS=rs811394792;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	179268758	179268857	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174542133;1allele=T/C;version=Hapmap2;RS=rs132061035;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	179272248	179272347	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:174545623;1allele=T/C;version=Hapmap2;RS=rs805547348;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	179287219	179287318	.	+	.	Name=Days_to_silk;B73v2_pos=3:174560595;1allele=G/A;version=Hapmap2;RS=rs277212004;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	179336134	179336233	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:174569106;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179497925	179498024	.	+	.	Name=Leaf_width;B73v2_pos=3:174766481;1allele=T/G;version=Hapmap2;RS=rs839752904;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	179501419	179501518	.	+	.	Name=Days_to_silk;B73v2_pos=3:174769975;1allele=G/A;version=Hapmap2;RS=rs129525743;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	179565873	179565972	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:174826740;1allele=C/A;version=Hapmap2;RS=rs818010534;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	179599407	179599506	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:174856744;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179602826	179602925	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:174860707;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	179892692	179892791	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:175157743;1allele=C/T;version=Hapmap2;RS=rs833847424;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	179927063	179927162	.	+	.	Name=Protein;B73v2_pos=3:175187984;1allele=T/C;version=Hapmap2;RS=rs277212587;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	179936403	179936502	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:175197327;1allele=A/G;version=Hapmap2;RS=rs827565874;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	179972766	179972865	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:175266402;1allele=T/C;version=Hapmap2;RS=rs828947626;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	179993727	179993826	.	+	.	Name=Protein;B73v2_pos=3:175287362;1allele=T/C;version=Hapmap2;RS=rs826575346;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	179993906	179994005	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:175287541;1allele=C/T;version=Hapmap2;RS=rs839550183;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	179994578	179994677	.	+	.	Name=Protein;B73v2_pos=3:175288213;1allele=A/T;version=Hapmap2;RS=rs829090934;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	180154259	180154358	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:175374797;1allele=A/G;version=Hapmap2;RS=rs811734883;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	180317007	180317106	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:175534189;1allele=A/G;version=Hapmap2;RS=rs827413779;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	180321180	180321279	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:175538362;1allele=A/G;version=Hapmap2;RS=rs808306478;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	180324459	180324558	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:175541640;1allele=G/C;version=Hapmap1;RS=rs827383397;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	180333684	180333783	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175550864;1allele=/CTGTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180335238	180335337	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175552418;1allele=C/T;version=Hapmap2;RS=rs132061788;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	180336147	180336246	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175553327;1allele=GATCAG/;version=Hapmap1;RS=rs843374082;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	180336195	180336294	.	+	.	Name=Total_amino_acids;B73v2_pos=3:175553375;1allele=A/G;version=Hapmap2;RS=rs821365853;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	180336671	180336770	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175553851;1allele=G/C;version=Hapmap2;RS=rs277212828;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	180336728	180336827	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175553908;1allele=A/C;version=Hapmap2;RS=rs724834494;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	180337336	180337435	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175554516;1allele=C/G;version=Hapmap2;RS=rs129421584;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	180344358	180344457	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:175561538;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180414285	180414384	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175631976;1allele=A/G;version=Hapmap2;RS=rs129297227;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	180456606	180456705	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175686212;1allele=C/T;version=Hapmap2;RS=rs816004517;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	180456659	180456758	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175686265;1allele=T/C;version=Hapmap1;RS=rs132061903;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	180460078	180460177	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:175689684;1allele=T/C;version=Hapmap2;RS=rs823229917;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	180460651	180460750	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175690257;1allele=A/G;version=Hapmap2;RS=rs727249714;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	180460690	180460789	.	+	.	Name=Total_amino_acids;B73v2_pos=3:175690296;1allele=G/A;version=Hapmap1;RS=rs726177233;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	180461361	180461460	.	+	.	Name=Total_amino_acids;B73v2_pos=3:175690967;1allele=C/A;version=Hapmap2;RS=rs277212997;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	180462895	180462994	.	+	.	Name=Total_amino_acids;B73v2_pos=3:175692501;1allele=A/T;version=Hapmap2;RS=rs129547580;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	180465426	180465525	.	+	.	Name=Height_above_ear;B73v2_pos=3:175695032;1allele=G/C;version=Hapmap1;RS=rs132062033;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	180467744	180467843	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175697350;1allele=/GCAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180540561	180540660	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:175757920;1allele=T/A;version=Hapmap2;RS=rs846056885;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	180542934	180543033	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175760289;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180560044	180560143	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:175777401;1allele=G/T;version=Hapmap2;RS=rs823100892;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	180561256	180561355	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:175778613;1allele=C/T;version=Hapmap2;RS=rs277213252;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	180562688	180562787	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175780045;1allele=T/A;version=Hapmap2;RS=rs129399695;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	180652954	180653053	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:175869582;1allele=C/T;version=Hapmap1;RS=rs132062269;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	180681052	180681151	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175898481;1allele=G/A;version=Hapmap2;RS=rs132062295;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	180681088	180681187	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175898517;1allele=A/T;version=Hapmap2;RS=rs724858203;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	180683194	180683293	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175900623;1allele=C/G;version=Hapmap2;RS=rs129489531;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	180683442	180683541	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:175900871;1allele=T/A;version=Hapmap2;RS=rs277213354;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	180706783	180706882	.	+	.	Name=Total_amino_acids;B73v2_pos=3:175924160;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180722513	180722612	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175939892;1allele=C/T;version=Hapmap2;RS=rs824713275;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	180746466	180746565	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:175958157;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180747589	180747688	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:175959280;1allele=C/T;version=Hapmap2;RS=rs815332771;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	180750335	180750434	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:175962026;1allele=C/T;version=Hapmap2;RS=rs132062454;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	180751713	180751812	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175963404;1allele=/GC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180759152	180759251	.	+	.	Name=Starch;B73v2_pos=3:175970843;1allele=C/A;version=Hapmap2;RS=rs814445622;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	180760021	180760120	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:175971712;1allele=T/C;version=Hapmap2;RS=rs810765572;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	180806552	180806651	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176025734;1allele=C/T;version=Hapmap2;RS=rs129358922;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	180822323	180822422	.	+	.	Name=Leaf_width;B73v2_pos=3:176041506;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	180822440	180822539	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:176041623;1allele=G/C;version=Hapmap2;RS=rs848110309;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	180920672	180920771	.	+	.	Name=Total_amino_acids;B73v2_pos=3:176140108;1allele=G/A;version=Hapmap2;RS=rs830274497;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	180938623	180938722	.	+	.	Name=Ear_row_number;B73v2_pos=3:176158054;1allele=T/C;version=Hapmap2;RS=rs819313006;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	180995484	180995583	.	+	.	Name=Stalk_strength;B73v2_pos=3:176205852;1allele=C/T;version=Hapmap2;RS=rs827670529;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	181058601	181058700	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176261269;1allele=A/G;version=Hapmap2;RS=rs826995493;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	181059021	181059120	.	+	.	Name=Height_above_ear;B73v2_pos=3:176261689;1allele=C/T;version=Hapmap1;RS=rs132062862;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	181059569	181059668	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:176262237;1allele=A/C;version=Hapmap2;RS=rs132062901;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	181064273	181064372	.	+	.	Name=Stalk_strength;B73v2_pos=3:176266941;1allele=C/A;version=Hapmap2;RS=rs846870533;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	181066180	181066279	.	+	.	Name=Stalk_strength;B73v2_pos=3:176268848;1allele=C/T;version=Hapmap2;RS=rs849060945;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	181070677	181070776	.	+	.	Name=Stalk_strength;B73v2_pos=3:176273345;1allele=T/C;version=Hapmap2;RS=rs837200499;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181093924	181094023	.	+	.	Name=Leaf_width;B73v2_pos=3:176299586;1allele=A/C;version=Hapmap2;RS=rs831974970;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	181119313	181119412	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:176324975;1allele=G/A;version=Hapmap2;RS=rs821730353;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	181121259	181121358	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:176326921;1allele=T/A;version=Hapmap2;RS=rs835588931;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	181121315	181121414	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:176326977;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181126905	181127004	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:176333439;1allele=C/T;version=Hapmap1;RS=rs132063230;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	181151904	181152003	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176358438;1allele=C/T;version=Hapmap2;RS=rs801453905;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	181155224	181155323	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:176361756;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181158724	181158823	.	+	.	Name=Leaf_width;B73v2_pos=3:176365256;1allele=T/C;version=Hapmap2;RS=rs838826540;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181195146	181195245	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176401674;1allele=C/T;version=Hapmap2;RS=rs1062798810;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181228682	181228781	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176435443;1allele=T/A;version=Hapmap2;RS=rs806324272;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	181254763	181254862	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176507168;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181255140	181255239	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176506791;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181280659	181280758	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176481270;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181282503	181282602	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176479426;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181302541	181302640	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:176459382;1allele=A/G;version=Hapmap2;RS=rs827254938;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	181327961	181328060	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:176525391;1allele=T/A;version=Hapmap2;RS=rs829919077;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	181362309	181362408	.	+	.	Name=Leaf_width;B73v2_pos=3:176559041;1allele=T/C;version=Hapmap2;RS=rs277214484;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181362400	181362499	.	+	.	Name=Leaf_width;B73v2_pos=3:176559132;1allele=C/T;version=Hapmap2;RS=rs847670632;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	181365225	181365324	.	+	.	Name=Leaf_width;B73v2_pos=3:176561957;1allele=C/A;version=Hapmap2;RS=rs806543519;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	181366191	181366290	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176562923;1allele=T/C;version=Hapmap1;RS=rs132063671;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	181373883	181373982	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176570543;1allele=T/C;version=Hapmap1;RS=rs132064075;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181400718	181400817	.	+	.	Name=Leaf_width;B73v2_pos=3:176597378;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181401062	181401161	.	+	.	Name=Leaf_width;B73v2_pos=3:176597722;1allele=G/C;version=Hapmap2;RS=rs132064106;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	181401365	181401464	.	+	.	Name=Plant_height;B73v2_pos=3:176598025;1allele=T/G;version=Hapmap1;RS=rs132064112;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181404069	181404168	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176600729;1allele=C/G;version=Hapmap2;RS=rs277214547;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	181489103	181489202	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176676742;1allele=T/A;version=Hapmap1;RS=rs132064149;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181498114	181498213	.	+	.	Name=Stalk_strength;B73v2_pos=3:176685753;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181498158	181498257	.	+	.	Name=Stalk_strength;B73v2_pos=3:176685797;1allele=G/A;version=Hapmap2;RS=rs810525639;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	181573560	181573659	.	+	.	Name=Leaf_width;B73v2_pos=3:176760881;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	181615057	181615156	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176802378;1allele=G/T;version=Hapmap2;RS=rs132064259;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	181615157	181615256	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176802478;1allele=C/T;version=Hapmap2;RS=rs834733563;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	181619428	181619527	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176806749;1allele=A/G;version=Hapmap2;RS=rs842442020;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	181842056	181842155	.	+	.	Name=Plant_height;B73v2_pos=3:176875314;1allele=C/T;version=Hapmap2;RS=rs810545673;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	181849382	181849481	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:176882641;1allele=A/G;version=Hapmap2;RS=rs277214975;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	181988290	181988389	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:177017658;1allele=A/G;version=Hapmap2;RS=rs820541978;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	182015768	182015867	.	+	.	Name=Plant_height;B73v2_pos=3:177045152;1allele=A/G;version=Hapmap2;RS=rs847678642;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	182025829	182025928	.	+	.	Name=Stalk_strength;B73v2_pos=3:177054852;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182025829	182025928	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:177054852;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182095408	182095507	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177121770;1allele=A/C;version=Hapmap2;RS=rs849480197;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	182104792	182104891	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177131154;1allele=G/T;version=Hapmap2;RS=rs129543604;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	182262148	182262247	.	+	.	Name=Leaf_width;B73v2_pos=3:177283613;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182274628	182274727	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177296094;1allele=A/T;version=Hapmap2;RS=rs804683245;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	182277648	182277747	.	+	.	Name=Leaf_length;B73v2_pos=3:177299114;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182284135	182284234	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177305601;1allele=A/C;version=Hapmap2;RS=rs815914431;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	182306298	182306362	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177367333;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182342816	182342915	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177358304;1allele=A/G;version=Hapmap2;RS=rs1062444284;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	182346677	182346754	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177362166;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182364924	182365023	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:177382401;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182378777	182378876	.	+	.	Name=Height_above_ear;B73v2_pos=3:177396256;1allele=T/C;version=Hapmap2;RS=rs277216477;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	182383296	182383395	.	+	.	Name=Ear_row_number;B73v2_pos=3:177400778;1allele=G/A;version=Hapmap2;RS=rs834564428;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	182395509	182395608	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:177408934;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	182432917	182433016	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:177445465;1allele=T/C;version=Hapmap2;RS=rs841689002;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	182486513	182486612	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:177493374;1allele=A/G;version=Hapmap2;RS=rs129359739;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	182487370	182487469	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:177494231;1allele=A/G;version=Hapmap2;RS=rs832676272;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	182487415	182487514	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:177494276;1allele=AC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183016798	183016897	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:178001316;1allele=G/A;version=Hapmap2;RS=rs830027495;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	183016864	183016963	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:178001382;1allele=C/A;version=Hapmap2;RS=rs726911314;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	183021409	183021508	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:178005909;1allele=C/T;version=Hapmap2;RS=rs824528807;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	183038007	183038106	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178022507;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183074833	183074932	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:178068044;1allele=C/T;version=Hapmap2;RS=rs810878796;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	183094574	183094673	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:178087783;1allele=C/A;version=Hapmap2;RS=rs801652822;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	183114152	183114251	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:178101048;1allele=T/C;version=Hapmap2;RS=rs841064484;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	183161716	183161815	.	+	.	Name=Leaf_width;B73v2_pos=3:178134126;1allele=G/C;version=Hapmap2;RS=rs829015651;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	183179172	183179271	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:178151582;1allele=/GGCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183179340	183179439	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:178151750;1allele=T/G;version=Hapmap2;RS=rs132065330;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	183181588	183181687	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:178153994;1allele=G/C;version=Hapmap2;RS=rs811330779;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	183212919	183213018	.	+	.	Name=Leaf_width;B73v2_pos=3:178187905;1allele=T/C;version=Hapmap2;RS=rs277218297;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	183216378	183216477	.	+	.	Name=Leaf_width;B73v2_pos=3:178191365;1allele=C/G;version=Hapmap2;RS=rs132065468;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	183218114	183218213	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:178193101;1allele=C/T;version=Hapmap2;RS=rs277218327;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	183236700	183236799	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:178211688;1allele=G/A;version=Hapmap2;RS=rs804945175;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	183345729	183345827	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178318758;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183367464	183367563	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178340494;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183368188	183368287	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:178341218;1allele=T/C;version=Hapmap2;RS=rs809107333;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	183405637	183405736	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178377782;1allele=A/T;version=Hapmap2;RS=rs277219019;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	183571886	183571985	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:178540822;1allele=G/T;version=Hapmap2;RS=rs277219209;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	183591761	183591860	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:178560789;1allele=T/C;version=Hapmap2;RS=rs277219383;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	183597281	183597380	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178566294;1allele=C/A;version=Hapmap2;RS=rs841109817;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	183598915	183599014	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178567928;1allele=T/C;version=Hapmap2;RS=rs808144577;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	183602937	183603036	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178571950;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183603851	183603950	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178572864;1allele=A/G;version=Hapmap1;RS=rs132066054;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	183738842	183738941	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178711082;1allele=G/A;version=Hapmap2;RS=rs1063682516;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	183756864	183756963	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178729046;1allele=C/G;version=Hapmap2;RS=rs129601628;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	183757869	183757968	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178730051;1allele=C/A;version=Hapmap1;RS=rs132066162;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	183807247	183807346	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:178779430;1allele=/ATC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183808386	183808485	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178780569;1allele=G/T;version=Hapmap2;RS=rs132066243;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	183832006	183832105	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178801697;1allele=A/C;version=Hapmap2;RS=rs277219901;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	183873709	183873808	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178833781;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183873820	183873919	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178833670;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183874961	183875060	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178832529;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183875759	183875858	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:178831729;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	183908166	183908265	.	+	.	Name=Leaf_width;B73v2_pos=3:178873662;1allele=C/A;version=Hapmap2;RS=rs277220163;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	184102085	184102184	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179062992;1allele=T/G;version=Hapmap2;RS=rs841632528;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	184102116	184102215	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179063023;1allele=G/T;version=Hapmap2;RS=rs843135088;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	184103212	184103311	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179064600;1allele=C/T;version=Hapmap2;RS=rs829719145;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	184104257	184104356	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179065645;1allele=+/-;version=Hapmap2;RS=rs835590863;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	184104546	184104645	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179065934;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184108043	184108142	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179069431;1allele=T/G;version=Hapmap2;RS=rs842886195;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	184110905	184111004	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179072293;1allele=A/G;version=Hapmap2;RS=rs821705918;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184111008	184111107	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179072396;1allele=A/C;version=Hapmap2;RS=rs809152557;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	184111591	184111690	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179072979;1allele=C/T;version=Hapmap2;RS=rs132066563;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	184153258	184153357	.	+	.	Name=Leaf_width;B73v2_pos=3:179113684;1allele=C/T;version=Hapmap2;RS=rs846299295;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	184157344	184157443	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179117770;1allele=T/C;version=Hapmap1;RS=rs132066709;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184165717	184165816	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179126144;1allele=C/T;version=Hapmap2;RS=rs829902628;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	184264440	184264539	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179218970;1allele=T/C;version=Hapmap1;RS=rs132066786;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184272050	184272149	.	+	.	Name=Leaf_width;B73v2_pos=3:179227258;1allele=T/C;version=Hapmap2;RS=rs277220622;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	184316987	184317086	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179249911;1allele=A/G;version=Hapmap2;RS=rs826772473;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184328526	184328625	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179259697;1allele=A/G;version=Hapmap2;RS=rs802352062;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184328556	184328655	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179259727;1allele=A/G;version=Hapmap2;RS=rs828546062;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184333131	184333230	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179264302;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184398511	184398610	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:179330296;1allele=T/C;version=Hapmap1;RS=rs132067001;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	184398861	184398960	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179330646;1allele=/GCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184399544	184399643	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:179331329;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184422305	184422404	.	+	.	Name=Cob_diameter;B73v2_pos=3:179374433;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184423763	184423862	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179372975;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184484765	184484864	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:179414637;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184508035	184508134	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179438091;1allele=/GCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184582867	184582966	.	+	.	Name=Leaf_width;B73v2_pos=3:179516871;1allele=G/T;version=Hapmap2;RS=rs277221050;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	184618278	184618377	.	+	.	Name=Glucose;B73v2_pos=3:179552286;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184618278	184618377	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:179552286;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184702014	184702113	.	+	.	Name=Leaf_width;B73v2_pos=3:179639082;1allele=A/G;version=Hapmap1;RS=rs132067500;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184702075	184702174	.	+	.	Name=Leaf_width;B73v2_pos=3:179639143;1allele=A/C;version=Hapmap2;RS=rs132067503;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	184702381	184702480	.	+	.	Name=Height_above_ear;B73v2_pos=3:179639449;1allele=A/-;version=Hapmap1;RS=rs132067508;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	184704649	184704748	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:179641717;1allele=C/T;version=Hapmap2;RS=rs132067537;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	184734654	184734753	.	+	.	Name=Leaf_width;B73v2_pos=3:179674605;1allele=T/-;version=Hapmap1;RS=rs132067543;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	184782655	184782754	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179722626;1allele=T/A;version=Hapmap2;RS=rs829100406;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	184785456	184785555	.	+	.	Name=Leaf_width;B73v2_pos=3:179725427;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184798530	184798629	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179738500;1allele=T/G;version=Hapmap2;RS=rs839552464;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	184805593	184805692	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:179745564;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184849799	184849898	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:179790155;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184856975	184857074	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:179796837;1allele=G/A;version=Hapmap2;RS=rs132067716;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	184888400	184888499	.	+	.	Name=Stalk_strength;B73v2_pos=3:179824945;1allele=G/A;version=Hapmap2;RS=rs846498501;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	184926051	184926150	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:179861154;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	184928338	184928437	.	+	.	Name=Plant_height;B73v2_pos=3:179863441;1allele=C/T;version=Hapmap2;RS=rs129402814;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	184928415	184928514	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:179863518;1allele=T/G;version=Hapmap2;RS=rs129395845;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	185007609	185007708	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:179954535;1allele=T/A;version=Hapmap2;RS=rs277222027;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	185043375	185043474	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:179990725;1allele=G/T;version=Hapmap2;RS=rs129385238;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	185043859	185043958	.	+	.	Name=Leaf_width;B73v2_pos=3:179991209;1allele=C/T;version=Hapmap2;RS=rs277222175;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	185060598	185060697	.	+	.	Name=Leaf_width;B73v2_pos=3:180007949;1allele=A/T;version=Hapmap2;RS=rs129307718;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	185060664	185060763	.	+	.	Name=Leaf_width;B73v2_pos=3:180008015;1allele=A/G;version=Hapmap2;RS=rs828583330;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	185084061	185084160	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:180031702;1allele=C/T;version=Hapmap2;RS=rs277222288;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	185084635	185084734	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:180032276;1allele=A/G;version=Hapmap2;RS=rs821166718;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	185085660	185085759	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:180033301;1allele=A/G;version=Hapmap2;RS=rs841860996;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	185096337	185096436	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:180043978;1allele=T/C;version=Hapmap2;RS=rs277222344;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	185154036	185154135	.	+	.	Name=Stalk_strength;B73v2_pos=3:180103749;1allele=C/T;version=Hapmap2;RS=rs848949548;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	185158409	185158508	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:180108122;1allele=G/A;version=Hapmap1;RS=rs132067910;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	185167827	185167926	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:180117540;1allele=T/C;version=Hapmap2;RS=rs843711109;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	185195915	185196014	.	+	.	Name=Leaf_length;B73v2_pos=3:180145812;1allele=A/C;version=Hapmap2;RS=rs843423311;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	185218710	185218809	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:180168611;1allele=T/C;version=Hapmap2;RS=rs823206654;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	185222454	185222553	.	+	.	Name=Glucose;B73v2_pos=3:180172355;1allele=C/T;version=Hapmap2;RS=rs845654637;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	185224365	185224464	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:180174267;1allele=C/T;version=Hapmap2;RS=rs823836927;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	185241379	185241478	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:180191283;1allele=G/A;version=Hapmap2;RS=rs826708709;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	185243751	185243850	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:180193655;1allele=C/T;version=Hapmap2;RS=rs819427966;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	185253215	185253314	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:180203027;1allele=G/A;version=Hapmap1;RS=rs129441723;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	185400994	185401093	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:180317581;1allele=T/G;version=Hapmap1;RS=rs817545548;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	185401322	185401421	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:180317909;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	185401625	185401724	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:180318212;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	185407715	185407814	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:180324303;1allele=A/T;version=Hapmap2;RS=rs830223048;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	185576998	185577097	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:180498422;1allele=T/C;version=Hapmap2;RS=rs818786175;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	185584840	185584939	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:180506264;1allele=T/G;version=Hapmap2;RS=rs277222907;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	185588514	185588613	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:180509938;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	185643485	185643584	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:180570765;1allele=G/A;version=Hapmap1;RS=rs132068417;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	185768180	185768279	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:180671689;1allele=G/C;version=Hapmap2;RS=rs810728094;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	185851974	185852073	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:180759466;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186110486	186110585	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181003058;1allele=G/C;version=Hapmap2;RS=rs806094756;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	186110522	186110621	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181003094;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186160180	186160279	.	+	.	Name=Leaf_width;B73v2_pos=3:181068175;1allele=C/G;version=Hapmap1;RS=rs132069002;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	186205253	186205352	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181114507;1allele=T/G;version=Hapmap2;RS=rs1064295038;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	186226254	186226353	.	+	.	Name=Stalk_strength;B73v2_pos=3:181135539;1allele=T/A;version=Hapmap2;RS=rs804869346;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	186671224	186671323	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181554633;1allele=A/C;version=Hapmap2;RS=rs830265511;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	186677104	186677203	.	+	.	Name=Height_above_ear;B73v2_pos=3:181560513;1allele=A/C;version=Hapmap2;RS=rs812965853;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	186677735	186677834	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181561144;1allele=T/C;version=Hapmap2;RS=rs824421662;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186677779	186677878	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181561188;1allele=A/G;version=Hapmap2;RS=rs849963158;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186677779	186677878	.	+	.	Name=Height_above_ear;B73v2_pos=3:181561188;1allele=A/G;version=Hapmap2;RS=rs849963158;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186720866	186720965	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181616555;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186721244	186721343	.	+	.	Name=Protein;B73v2_pos=3:181616933;1allele=T/C;version=Hapmap2;RS=rs132069603;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186721244	186721343	.	+	.	Name=Height_above_ear;B73v2_pos=3:181616933;1allele=T/C;version=Hapmap1;RS=rs132069603;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186721332	186721431	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181617021;1allele=A/G;version=Hapmap2;RS=rs277224208;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186721494	186721593	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:181617183;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186745580	186745679	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181641270;1allele=C/A;version=Hapmap2;RS=rs846357490;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	186753185	186753284	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:181648874;1allele=G/A;version=Hapmap2;RS=rs803882133;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186754387	186754486	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181650076;1allele=C/G;version=Hapmap2;RS=rs277224268;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	186754433	186754532	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181650122;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186755085	186755184	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181650774;1allele=C/G;version=Hapmap2;RS=rs277224272;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	186755324	186755423	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181651013;1allele=C/T;version=Hapmap2;RS=rs129458008;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	186755324	186755423	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181651013;1allele=C/T;version=Hapmap2;RS=rs129458008;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	186755779	186755878	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181651468;1allele=G/T;version=Hapmap2;RS=rs846245841;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	186756475	186756574	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181652164;1allele=A/T;version=Hapmap2;RS=rs277224281;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	186757215	186757314	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181652904;1allele=G/A;version=Hapmap2;RS=rs277224282;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186757426	186757525	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181653115;1allele=A/G;version=Hapmap2;RS=rs277224283;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186759326	186759425	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181655015;1allele=G/A;version=Hapmap2;RS=rs277224292;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186759557	186759656	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181655246;1allele=C/T;version=Hapmap2;RS=rs277224294;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186759829	186759928	.	+	.	Name=Cob_diameter;B73v2_pos=3:181655518;1allele=C/T;version=Hapmap2;RS=rs825787151;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	186786026	186786125	.	+	.	Name=Height_above_ear;B73v2_pos=3:181681338;1allele=A/T;version=Hapmap2;RS=rs1063919297;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	186786026	186786125	.	+	.	Name=Leaf_width;B73v2_pos=3:181681338;1allele=A/T;version=Hapmap2;RS=rs1063919297;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	186786638	186786737	.	+	.	Name=Height_above_ear;B73v2_pos=3:181681950;1allele=G/A;version=Hapmap2;RS=rs849960486;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	186790957	186791056	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181686269;1allele=A/G;version=Hapmap2;RS=rs132069684;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	186794777	186794876	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181690089;1allele=C/A;version=Hapmap2;RS=rs277224412;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	186794797	186794896	.	+	.	Name=Protein;B73v2_pos=3:181690109;1allele=G/A;version=Hapmap2;RS=rs811955978;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186795094	186795193	.	+	.	Name=Protein;B73v2_pos=3:181690406;1allele=G/T;version=Hapmap2;RS=rs132069714;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	186796719	186796818	.	+	.	Name=Cob_diameter;B73v2_pos=3:181695917;1allele=A/G;version=Hapmap2;RS=rs726532077;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186797243	186797342	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:181696441;1allele=G/C;version=Hapmap2;RS=rs132069783;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	186799843	186799942	.	+	.	Name=Starch;B73v2_pos=3:181699040;1allele=C/A;version=Hapmap2;RS=rs129355394;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	186800732	186800831	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181699929;1allele=G/T;version=Hapmap2;RS=rs277224442;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	186800867	186800966	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:181700064;1allele=C/T;version=Hapmap2;RS=rs129282295;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	186805147	186805246	.	+	.	Name=Height_above_ear;B73v2_pos=3:181704344;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186805274	186805373	.	+	.	Name=Height_above_ear;B73v2_pos=3:181704471;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186810625	186810724	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181709822;1allele=C/T;version=Hapmap2;RS=rs818717915;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	186860438	186860537	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181750853;1allele=G/A;version=Hapmap2;RS=rs1061821337;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186861732	186861831	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181752147;1allele=A/G;version=Hapmap2;RS=rs129497445;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186864083	186864182	.	+	.	Name=Height_above_ear;B73v2_pos=3:181754499;1allele=G/A;version=Hapmap2;RS=rs724228686;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	186878772	186878871	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181758947;1allele=G/A;version=Hapmap2;RS=rs277224585;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186884138	186884237	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181764314;1allele=C/T;version=Hapmap2;RS=rs129463469;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186885721	186885820	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181765897;1allele=A/T;version=Hapmap2;RS=rs819852160;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	186886426	186886525	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181766602;1allele=G/C;version=Hapmap2;RS=rs277224611;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	186886426	186886525	.	+	.	Name=Ear_height;B73v2_pos=3:181766602;1allele=G/C;version=Hapmap2;RS=rs277224611;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	186886531	186886630	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181766707;1allele=C/T;version=Hapmap2;RS=rs277224612;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186886531	186886630	.	+	.	Name=Ear_height;B73v2_pos=3:181766707;1allele=C/T;version=Hapmap2;RS=rs277224612;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186886531	186886630	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181766707;1allele=C/T;version=Hapmap2;RS=rs277224612;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186904815	186904914	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181787360;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186907478	186907577	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181790023;1allele=TTTA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186913547	186913646	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181796092;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186930537	186930636	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181813250;1allele=G/A;version=Hapmap2;RS=rs817037964;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186935220	186935319	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181817933;1allele=T/C;version=Hapmap2;RS=rs277224842;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186935220	186935319	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181817933;1allele=T/C;version=Hapmap2;RS=rs277224842;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186935318	186935417	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181818031;1allele=T/A;version=Hapmap1;RS=rs132070053;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	186937875	186937974	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181820588;1allele=T/G;version=Hapmap2;RS=rs843229756;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186937875	186937974	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181820588;1allele=T/G;version=Hapmap2;RS=rs843229756;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186938241	186938340	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181820954;1allele=T/C;version=Hapmap2;RS=rs129516646;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	186941221	186941320	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181823934;1allele=G/A;version=Hapmap2;RS=rs1063161959;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	186944752	186944851	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181827465;1allele=G/T;version=Hapmap2;RS=rs836442184;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	186946438	186946537	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:181829151;1allele=G/A;version=Hapmap2;RS=rs830108570;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	186946870	186946969	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:181829583;1allele=T/C;version=Hapmap2;RS=rs802600256;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186982244	186982343	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181864962;1allele=T/C;version=Hapmap2;RS=rs817691409;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	186988359	186988458	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:181871077;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	186993672	186993771	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181876389;1allele=G/T;version=Hapmap2;RS=rs818602994;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	186997676	186997775	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181880394;1allele=C/T;version=Hapmap2;RS=rs820123574;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187020336	187020435	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181903072;1allele=G/A;version=Hapmap2;RS=rs845761961;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	187024182	187024281	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181906918;1allele=TA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187024377	187024476	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181907113;1allele=A/G;version=Hapmap2;RS=rs129566478;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	187024670	187024769	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181907406;1allele=A/G;version=Hapmap2;RS=rs846146209;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	187024671	187024770	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:181907407;1allele=G/A;version=Hapmap2;RS=rs803091973;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	187086006	187086105	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:181968644;1allele=G/C;version=Hapmap2;RS=rs818572633;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	187106741	187106840	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:181989383;1allele=C/T;version=Hapmap2;RS=rs834330682;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187132484	187132583	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:182015119;1allele=T/A;version=Hapmap2;RS=rs805154328;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	187150217	187150316	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182032854;1allele=C/T;version=Hapmap2;RS=rs814046431;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187150217	187150316	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:182032854;1allele=C/T;version=Hapmap2;RS=rs814046431;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187166488	187166587	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:182049128;1allele=TT/;version=Hapmap1;RS=rs806322939;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187169618	187169717	.	+	.	Name=Ear_height;B73v2_pos=3:182052242;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187169634	187169733	.	+	.	Name=Ear_height;B73v2_pos=3:182052258;1allele=C/T;version=Hapmap2;RS=rs814306487;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187169687	187169786	.	+	.	Name=Ear_height;B73v2_pos=3:182052311;1allele=A/G;version=Hapmap2;RS=rs806359157;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	187169700	187169799	.	+	.	Name=Ear_height;B73v2_pos=3:182052324;1allele=A/G;version=Hapmap2;RS=rs817320076;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	187170000	187170099	.	+	.	Name=Ear_height;B73v2_pos=3:182052624;1allele=T/C;version=Hapmap2;RS=rs277225358;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187175823	187175922	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182058936;1allele=C/A;version=Hapmap2;RS=rs844434581;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	187178290	187178389	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:182061403;1allele=T/C;version=Hapmap2;RS=rs277225374;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187178541	187178640	.	+	.	Name=Ear_height;B73v2_pos=3:182061654;1allele=C/T;version=Hapmap2;RS=rs277225375;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187178541	187178640	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:182061654;1allele=C/T;version=Hapmap2;RS=rs277225375;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187180453	187180552	.	+	.	Name=Leaf_width;B73v2_pos=3:182063566;1allele=G/A;version=Hapmap2;RS=rs803195839;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	187191354	187191456	.	+	.	Name=Leaf_width;B73v2_pos=3:182074372;1allele=A/G;version=Hapmap2;RS=rs277225419;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187192161	187192260	.	+	.	Name=Height_above_ear;B73v2_pos=3:182075176;1allele=A/T;version=Hapmap2;RS=rs838275880;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	187192357	187192456	.	+	.	Name=Leaf_width;B73v2_pos=3:182075372;1allele=C/T;version=Hapmap2;RS=rs277225430;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187198166	187198265	.	+	.	Name=Height_above_ear;B73v2_pos=3:182081181;1allele=A/T;version=Hapmap2;RS=rs277225488;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187241179	187241278	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:182124196;1allele=G/A;version=Hapmap2;RS=rs846415343;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	187241658	187241757	.	+	.	Name=Height_above_ear;B73v2_pos=3:182124675;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187251241	187251340	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:182134258;1allele=C/G;version=Hapmap2;RS=rs849191149;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	187284316	187284415	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:182167369;1allele=T/C;version=Hapmap2;RS=rs802568691;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187294803	187294902	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:182177868;1allele=T/C;version=Hapmap2;RS=rs808799400;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187304895	187304994	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182205041;1allele=G/A;version=Hapmap2;RS=rs842994443;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	187309099	187309198	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:182209247;1allele=T/C;version=Hapmap2;RS=rs129594208;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187309100	187309199	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:182209248;1allele=G/A;version=Hapmap2;RS=rs132070494;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	187314459	187314558	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182214618;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187320941	187321040	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182221101;1allele=C/T;version=Hapmap2;RS=rs1063661528;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187329173	187329272	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:182229334;1allele=C/T;version=Hapmap2;RS=rs827972779;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	187398993	187399092	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:182279648;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187398993	187399092	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182279648;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187443010	187443109	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:182329582;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187445700	187445799	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:182332278;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187758789	187758888	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:182629347;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	187781307	187781406	.	+	.	Name=Leaf_width;B73v2_pos=3:182708660;1allele=C/G;version=Hapmap2;RS=rs277226150;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	187782890	187782989	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:182710243;1allele=T/A;version=Hapmap2;RS=rs132070756;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	187790548	187790647	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:182717902;1allele=G/A;version=Hapmap2;RS=rs129588457;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	187790548	187790647	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182717902;1allele=G/A;version=Hapmap2;RS=rs129588457;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	187800955	187801054	.	+	.	Name=Ear_height;B73v2_pos=3:182729193;1allele=G/A;version=Hapmap2;RS=rs129275587;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	187802443	187802542	.	+	.	Name=Ear_height;B73v2_pos=3:182730681;1allele=C/T;version=Hapmap2;RS=rs277226159;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187803386	187803485	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:182731624;1allele=G/A;version=Hapmap2;RS=rs1062153088;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	187805205	187805304	.	+	.	Name=Ear_height;B73v2_pos=3:182733443;1allele=G/T;version=Hapmap2;RS=rs129553285;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	187806177	187806276	.	+	.	Name=Ear_height;B73v2_pos=3:182734415;1allele=A/T;version=Hapmap2;RS=rs277226169;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	187818190	187818289	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:182747546;1allele=C/T;version=Hapmap2;RS=rs277226173;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	187818190	187818289	.	+	.	Name=Ear_height;B73v2_pos=3:182747546;1allele=C/T;version=Hapmap2;RS=rs277226173;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	188243329	188243428	.	+	.	Name=Height_above_ear;B73v2_pos=3:183132976;1allele=C/T;version=Hapmap2;RS=rs801787345;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	188268669	188268768	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183158313;1allele=A/T;version=Hapmap2;RS=rs1063916375;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	188289226	188289325	.	+	.	Name=Ear_height;B73v2_pos=3:183178871;1allele=G/A;version=Hapmap2;RS=rs844285363;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	188338971	188339070	.	+	.	Name=Ear_height;B73v2_pos=3:183227691;1allele=G/T;version=Hapmap2;RS=rs822663341;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	188338971	188339070	.	+	.	Name=Height_above_ear;B73v2_pos=3:183227691;1allele=G/T;version=Hapmap2;RS=rs822663341;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	188367948	188368047	.	+	.	Name=Leaf_width;B73v2_pos=3:183256854;1allele=C/G;version=Hapmap2;RS=rs129567895;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	188370394	188370493	.	+	.	Name=Leaf_width;B73v2_pos=3:183259300;1allele=C/T;version=Hapmap2;RS=rs129331582;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	188371232	188371331	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183260138;1allele=C/A;version=Hapmap2;RS=rs129580516;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	188373880	188373979	.	+	.	Name=Leaf_width;B73v2_pos=3:183262787;1allele=A/T;version=Hapmap2;RS=rs830479644;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	188377655	188377754	.	+	.	Name=Height_above_ear;B73v2_pos=3:183265633;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	188412053	188412152	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183300057;1allele=G/A;version=Hapmap2;RS=rs847994381;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	188418190	188418289	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:183306194;1allele=A/T;version=Hapmap2;RS=rs129314373;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	188422006	188422105	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183310010;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	188432417	188432516	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183320421;1allele=G/A;version=Hapmap2;RS=rs129591857;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	188451074	188451173	.	+	.	Name=Height_above_ear;B73v2_pos=3:183339077;1allele=G/T;version=Hapmap2;RS=rs822529561;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	188453387	188453486	.	+	.	Name=Height_above_ear;B73v2_pos=3:183341390;1allele=T/C;version=Hapmap2;RS=rs827976630;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	188466456	188466555	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183354418;1allele=C/T;version=Hapmap1;RS=rs132071172;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	188467543	188467642	.	+	.	Name=Height_above_ear;B73v2_pos=3:183355505;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	188490114	188490213	.	+	.	Name=Plant_height;B73v2_pos=3:183378078;1allele=T/G;version=Hapmap2;RS=rs277226517;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	188492795	188492894	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:183380759;1allele=G/T;version=Hapmap2;RS=rs845643029;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	188492795	188492894	.	+	.	Name=Height_above_ear;B73v2_pos=3:183380759;1allele=G/T;version=Hapmap2;RS=rs845643029;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	188498893	188498992	.	+	.	Name=Height_above_ear;B73v2_pos=3:183386857;1allele=A/G;version=Hapmap2;RS=rs129530707;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	188502928	188503027	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:183390892;1allele=A/G;version=Hapmap2;RS=rs837555671;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	188538825	188538924	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183433274;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	188664292	188664391	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:183551624;1allele=C/T;version=Hapmap2;RS=rs129485864;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	188666668	188666767	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183554000;1allele=A/G;version=Hapmap1;RS=rs129546988;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	188666668	188666767	.	+	.	Name=Ear_height;B73v2_pos=3:183554000;1allele=A/G;version=Hapmap2;RS=rs129546988;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	188675121	188675220	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:183562327;1allele=C/T;version=Hapmap2;RS=rs807473790;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	188683789	188683888	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:183570994;1allele=C/T;version=Hapmap2;RS=rs726884765;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	188721011	188721110	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:183614993;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	188758034	188758133	.	+	.	Name=Height_above_ear;B73v2_pos=3:183643709;1allele=A/C;version=Hapmap2;RS=rs1061410408;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	188758034	188758133	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183643709;1allele=A/C;version=Hapmap2;RS=rs1061410408;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	188759070	188759169	.	+	.	Name=Height_above_ear;B73v2_pos=3:183644745;1allele=A/C;version=Hapmap2;RS=rs1060521681;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	188759070	188759169	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183644745;1allele=A/C;version=Hapmap2;RS=rs1060521681;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	188763946	188764045	.	+	.	Name=Height_above_ear;B73v2_pos=3:183649621;1allele=T/C;version=Hapmap2;RS=rs832361221;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	188764119	188764218	.	+	.	Name=Height_above_ear;B73v2_pos=3:183649794;1allele=G/T;version=Hapmap2;RS=rs821726250;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	188820585	188820684	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:183701664;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	188820585	188820684	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:183701664;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	188857587	188857686	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:183758973;1allele=C/T;version=Hapmap2;RS=rs1064657029;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	188857587	188857686	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183758973;1allele=C/T;version=Hapmap2;RS=rs1064657029;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	188972763	188972862	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:183867087;1allele=C/T;version=Hapmap2;RS=rs129596195;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	188974406	188974505	.	+	.	Name=Height_above_ear;B73v2_pos=3:183868730;1allele=A/T;version=Hapmap1;RS=rs129331248;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	188974601	188974700	.	+	.	Name=Height_above_ear;B73v2_pos=3:183868925;1allele=G/A;version=Hapmap2;RS=rs727433773;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	188975448	188975547	.	+	.	Name=Height_above_ear;B73v2_pos=3:183869772;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	189076697	189076796	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:184001076;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	189208222	189208321	.	+	.	Name=Height_above_ear;B73v2_pos=3:184070845;1allele=G/C;version=Hapmap2;RS=rs817729346;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	189208610	189208709	.	+	.	Name=Height_above_ear;B73v2_pos=3:184071233;1allele=C/T;version=Hapmap2;RS=rs809836516;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189208690	189208789	.	+	.	Name=Height_above_ear;B73v2_pos=3:184071313;1allele=G/A;version=Hapmap2;RS=rs132071880;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	189210204	189210303	.	+	.	Name=Height_above_ear;B73v2_pos=3:184072827;1allele=G/T;version=Hapmap2;RS=rs842600742;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	189255197	189255296	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:184124773;1allele=C/T;version=Hapmap2;RS=rs828123925;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189286128	189286227	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:184153815;1allele=A/T;version=Hapmap2;RS=rs277227307;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	189398537	189398636	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184267527;1allele=A/T;version=Hapmap2;RS=rs129322648;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	189398989	189399088	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184267979;1allele=/CCCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	189399103	189399202	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184268093;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	189407581	189407680	.	+	.	Name=Glucose;B73v2_pos=3:184276569;1allele=C/A;version=Hapmap2;RS=rs815530232;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	189409404	189409503	.	+	.	Name=Height_above_ear;B73v2_pos=3:184278392;1allele=T/C;version=Hapmap2;RS=rs1062679317;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189409404	189409503	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:184278392;1allele=T/C;version=Hapmap2;RS=rs1062679317;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189413493	189413592	.	+	.	Name=Leaf_width;B73v2_pos=3:184282481;1allele=C/G;version=Hapmap2;RS=rs824304092;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	189535852	189535951	.	+	.	Name=Height_above_ear;B73v2_pos=3:184406290;1allele=T/G;version=Hapmap2;RS=rs725488360;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	189585683	189585782	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184454521;1allele=G/C;version=Hapmap2;RS=rs848599892;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	189586393	189586492	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184455231;1allele=C/G;version=Hapmap2;RS=rs824995103;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189594168	189594267	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:184463006;1allele=C/T;version=Hapmap2;RS=rs811531667;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189642083	189642182	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184496500;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	189642083	189642182	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:184496500;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	189805240	189805339	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:184634839;1allele=T/C;version=Hapmap2;RS=rs837199557;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	189825883	189825982	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:184674857;1allele=C/G;version=Hapmap2;RS=rs129547822;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	189827631	189827730	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:184676605;1allele=A/C;version=Hapmap2;RS=rs132073093;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	189828199	189828298	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184677173;1allele=G/A;version=Hapmap2;RS=rs132073117;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	189855775	189855874	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:184704718;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	189906766	189906865	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184756442;1allele=C/A;version=Hapmap2;RS=rs841928857;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	189906928	189907027	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184756604;1allele=C/T;version=Hapmap2;RS=rs818223126;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189906934	189907033	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:184756610;1allele=A/G;version=Hapmap2;RS=rs833852990;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	189920406	189920505	.	+	.	Name=Protein;B73v2_pos=3:184770081;1allele=C/T;version=Hapmap2;RS=rs804875679;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	189920977	189921076	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:184770652;1allele=A/G;version=Hapmap2;RS=rs277228199;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	189920977	189921076	.	+	.	Name=Height_above_ear;B73v2_pos=3:184770652;1allele=A/G;version=Hapmap2;RS=rs277228199;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	189923748	189923847	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:184773423;1allele=A/C;version=Hapmap2;RS=rs277228262;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	189974107	189974206	.	+	.	Name=Height_above_ear;B73v2_pos=3:184815801;1allele=A/G;version=Hapmap2;RS=rs812067240;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	189998208	189998307	.	+	.	Name=Height_above_ear;B73v2_pos=3:184843687;1allele=T/C;version=Hapmap2;RS=rs129323299;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	190088880	190088979	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:184931617;1allele=T/C;version=Hapmap2;RS=rs843084082;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	190091111	190091210	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:184933848;1allele=T/C;version=Hapmap2;RS=rs812361417;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	190097208	190097307	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:184939945;1allele=A/G;version=Hapmap2;RS=rs277228579;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	190101796	190101895	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:184944533;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190103879	190103978	.	+	.	Name=Ear_height;B73v2_pos=3:184946616;1allele=C/T;version=Hapmap2;RS=rs277228607;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	190182581	190182680	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:185048905;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190183047	190183146	.	+	.	Name=Ear_height;B73v2_pos=3:185048439;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190331617	190331716	.	+	.	Name=Leaf_length;B73v2_pos=3:185180586;1allele=A/G;version=Hapmap2;RS=rs838547952;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	190495334	190495433	.	+	.	Name=Leaf_width;B73v2_pos=3:185339262;1allele=C/T;version=Hapmap2;RS=rs830168902;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	190506077	190506176	.	+	.	Name=Ear_height;B73v2_pos=1:26080739;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190579973	190580072	.	+	.	Name=Ear_height;B73v2_pos=3:185422734;1allele=G/A;version=Hapmap2;RS=rs1060954433;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	190646174	190646273	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:185479634;1allele=G/T;version=Hapmap2;RS=rs817751955;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	190647096	190647195	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:185480556;1allele=C/T;version=Hapmap2;RS=rs819427026;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	190695869	190695968	.	+	.	Name=Ear_height;B73v2_pos=3:185517430;1allele=C/T;version=Hapmap2;RS=rs847566687;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	190702734	190702833	.	+	.	Name=Plant_height;B73v2_pos=1:26114993;1allele=G/A;version=Hapmap2;RS=rs827380433;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	190704234	190704333	.	+	.	Name=Fructose;B73v2_pos=1:26116672;1allele=G/A;version=Hapmap2;RS=rs819837401;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	190707175	190707274	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:185627785;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190757245	190757344	.	+	.	Name=Stalk_strength;B73v2_pos=3:185671833;1allele=T/C;version=Hapmap2;RS=rs834721531;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	190829706	190829805	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:185743396;1allele=G/A;version=Hapmap2;RS=rs277229388;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	190830267	190830366	.	+	.	Name=Height_above_ear;B73v2_pos=3:185743957;1allele=C/T;version=Hapmap2;RS=rs820450388;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	190836318	190836417	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:185750008;1allele=C/T;version=Hapmap2;RS=rs826424129;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	190840735	190840834	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:185754425;1allele=C/T;version=Hapmap2;RS=rs804250473;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	190875580	190875679	.	+	.	Name=Cob_diameter;B73v2_pos=3:185785279;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190889967	190890066	.	+	.	Name=Height_above_ear;B73v2_pos=3:185799667;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	190926744	190926843	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:185836455;1allele=G/A;version=Hapmap2;RS=rs726253761;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	190933333	190933432	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:185843044;1allele=A/G;version=Hapmap2;RS=rs833597020;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	190934105	190934204	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:185843816;1allele=G/A;version=Hapmap2;RS=rs802462363;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	190970309	190970408	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:185883155;1allele=G/A;version=Hapmap1;RS=rs132073887;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	191020906	191021005	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:185933755;1allele=A/G;version=Hapmap2;RS=rs277229645;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	191203174	191203273	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:186116862;1allele=G/A;version=Hapmap1;RS=rs132074177;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	191308372	191308471	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:186222186;1allele=G/A;version=Hapmap2;RS=rs132074418;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	191308372	191308471	.	+	.	Name=Ear_height;B73v2_pos=3:186222186;1allele=G/A;version=Hapmap2;RS=rs132074418;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	191311697	191311796	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:186225511;1allele=G/A;version=Hapmap2;RS=rs847507612;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	191480934	191481033	.	+	.	Name=Tassel_length;B73v2_pos=3:186393806;1allele=A/T;version=Hapmap2;RS=rs129602125;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	191512189	191512288	.	+	.	Name=Total_amino_acids;B73v2_pos=3:186425063;1allele=G/A;version=Hapmap2;RS=rs801622562;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	191545859	191545958	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:186458456;1allele=T/C;version=Hapmap2;RS=rs847761774;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	191597247	191597346	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:186511503;1allele=G/A;version=Hapmap2;RS=rs277230368;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	191609041	191609140	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:186523299;1allele=T/A;version=Hapmap2;RS=rs813404348;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	191808540	191808638	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:186695849;1allele=A/G;version=Hapmap2;RS=rs277230659;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	191930030	191930129	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:186828719;1allele=C/G;version=Hapmap2;RS=rs277230889;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	192035933	192036032	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:186955364;1allele=C/T;version=Hapmap2;RS=rs129389620;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	192036162	192036261	.	+	.	Name=Height_above_ear;B73v2_pos=3:186955135;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	192040055	192040154	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:186951242;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	192102843	192102942	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:187002898;1allele=A/G;version=Hapmap2;RS=rs847860385;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	192145779	192145878	.	+	.	Name=Stalk_strength;B73v2_pos=3:187045835;1allele=G/C;version=Hapmap2;RS=rs132075249;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	192271622	192271721	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187175236;1allele=C/T;version=Hapmap2;RS=rs837305431;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	192409140	192409239	.	+	.	Name=Plant_height;B73v2_pos=3:187321403;1allele=C/T;version=Hapmap2;RS=rs277231973;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	192412114	192412213	.	+	.	Name=Plant_height;B73v2_pos=3:187324377;1allele=G/A;version=Hapmap2;RS=rs812062535;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192412874	192412973	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:187325137;1allele=T/C;version=Hapmap2;RS=rs823683411;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	192428117	192428216	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:187342866;1allele=C/A;version=Hapmap1;RS=rs132075516;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	192478134	192478233	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:187393692;1allele=G/A;version=Hapmap2;RS=rs811306617;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192499204	192499303	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187414768;1allele=G/A;version=Hapmap2;RS=rs803512161;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192514959	192515058	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187430524;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	192528232	192528331	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:187443797;1allele=A/G;version=Hapmap2;RS=rs132075812;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	192554247	192554346	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187469816;1allele=G/A;version=Hapmap2;RS=rs277232338;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192554351	192554450	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:187469920;1allele=C/T;version=Hapmap2;RS=rs129545398;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	192558907	192559006	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187474476;1allele=C/A;version=Hapmap2;RS=rs132075900;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	192560038	192560137	.	+	.	Name=Plant_height;B73v2_pos=3:187475607;1allele=G/A;version=Hapmap1;RS=rs132075927;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192560038	192560137	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:187475607;1allele=G/A;version=Hapmap1;RS=rs132075927;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192618814	192618913	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187535087;1allele=T/C;version=Hapmap1;RS=rs132076020;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	192787791	192787890	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:187711936;1allele=G/C;version=Hapmap2;RS=rs809968520;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	192791561	192791660	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187715706;1allele=C/T;version=Hapmap2;RS=rs129597441;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	192793706	192793805	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187717851;1allele=T/G;version=Hapmap1;RS=rs129524974;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	192794426	192794525	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187718571;1allele=A/G;version=Hapmap2;RS=rs132076357;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	192794435	192794534	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187718580;1allele=G/A;version=Hapmap2;RS=rs277232701;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192816261	192816360	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187741475;1allele=A/C;version=Hapmap2;RS=rs129442382;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	192819008	192819107	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:187744222;1allele=G/C;version=Hapmap2;RS=rs129555851;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	192821137	192821236	.	+	.	Name=Ear_height;B73v2_pos=3:187746351;1allele=/TCTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	192864448	192864547	.	+	.	Name=Ear_height;B73v2_pos=3:187811566;1allele=T/-;version=Hapmap1;RS=rs132076470;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	192884918	192885017	.	+	.	Name=Leaf_width;B73v2_pos=3:187864030;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	192947309	192947408	.	+	.	Name=Ear_height;B73v2_pos=3:187898871;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	192949997	192950096	.	+	.	Name=Protein;B73v2_pos=3:187901559;1allele=C/A;version=Hapmap2;RS=rs132076607;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	192950268	192950367	.	+	.	Name=Protein;B73v2_pos=3:187901830;1allele=A/G;version=Hapmap1;RS=rs132076600;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	192950517	192950616	.	+	.	Name=Ear_height;B73v2_pos=3:187902079;1allele=G/C;version=Hapmap1;RS=rs132076590;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	192950682	192950781	.	+	.	Name=Ear_height;B73v2_pos=3:187902244;1allele=C/A;version=Hapmap1;RS=rs129445270;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	192951903	192952002	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:187903465;1allele=A/G;version=Hapmap2;RS=rs129310795;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192952019	192952118	.	+	.	Name=Ear_height;B73v2_pos=3:187903581;1allele=C/T;version=Hapmap2;RS=rs129515322;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	192952057	192952156	.	+	.	Name=Ear_height;B73v2_pos=3:187903619;1allele=A/G;version=Hapmap2;RS=rs829146529;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	192952562	192952661	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:187904124;1allele=G/A;version=Hapmap2;RS=rs821013649;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	192968781	192968880	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:187922329;1allele=T/C;version=Hapmap2;RS=rs277232927;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	192968781	192968880	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:187922329;1allele=T/C;version=Hapmap2;RS=rs277232927;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	192980305	192980404	.	+	.	Name=Plant_height;B73v2_pos=3:187933853;1allele=C/G;version=Hapmap2;RS=rs815057633;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	193062440	193062539	.	+	.	Name=Height_above_ear;B73v2_pos=3:188015760;1allele=C/G;version=Hapmap2;RS=rs816848882;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	193117530	193117629	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:188061391;1allele=G/A;version=Hapmap2;RS=rs835602381;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193125346	193125411	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:188069210;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193132033	193132132	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:188088718;1allele=A/G;version=Hapmap2;RS=rs724971781;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193132879	193132978	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:188089564;1allele=T/C;version=Hapmap2;RS=rs809938527;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	193138624	193138723	.	+	.	Name=Plant_height;B73v2_pos=3:188095309;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193165016	193165115	.	+	.	Name=Leaf_width;B73v2_pos=3:188121868;1allele=T/C;version=Hapmap2;RS=rs815186206;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	193295649	193295748	.	+	.	Name=Plant_height;B73v2_pos=3:188240530;1allele=A/G;version=Hapmap2;RS=rs277233156;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193300478	193300577	.	+	.	Name=Glutamate;B73v2_pos=3:188245359;1allele=G/A;version=Hapmap2;RS=rs132076780;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	193324238	193324337	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:188265652;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193332121	193332220	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:188276107;1allele=T/A;version=Hapmap2;RS=rs129601910;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	193390002	193390101	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:188333990;1allele=C/A;version=Hapmap2;RS=rs850028192;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193390887	193390986	.	+	.	Name=Total_amino_acids;B73v2_pos=3:188334875;1allele=G/A;version=Hapmap2;RS=rs813318304;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193395548	193395647	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:188339536;1allele=A/G;version=Hapmap2;RS=rs132077023;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193396143	193396242	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:188340131;1allele=G/A;version=Hapmap2;RS=rs132077052;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193433056	193433155	.	+	.	Name=Stalk_strength;B73v2_pos=3:188376821;1allele=A/T;version=Hapmap2;RS=rs277233365;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	193439743	193439842	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:188383865;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193572486	193572585	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:188509910;1allele=A/C;version=Hapmap2;RS=rs726204966;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	193598405	193598504	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:188537280;1allele=A/G;version=Hapmap2;RS=rs129377642;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193603707	193603806	.	+	.	Name=Tassel_length;B73v2_pos=3:188542582;1allele=G/T;version=Hapmap1;RS=rs132077331;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193608447	193608546	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:188547260;1allele=G/A;version=Hapmap2;RS=rs844276228;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193608447	193608546	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:188547260;1allele=G/A;version=Hapmap2;RS=rs844276228;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193608795	193608894	.	+	.	Name=Fructose;B73v2_pos=3:188547608;1allele=C/G;version=Hapmap2;RS=rs807040139;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	193684629	193684728	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:188623054;1allele=A/G;version=Hapmap2;RS=rs810064272;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193684629	193684728	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:188623054;1allele=A/G;version=Hapmap2;RS=rs810064272;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193735582	193735681	.	+	.	Name=Tassel_length;B73v2_pos=3:188664149;1allele=G/C;version=Hapmap1;RS=rs132077429;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	193737702	193737801	.	+	.	Name=Tassel_length;B73v2_pos=3:188666269;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193738338	193738437	.	+	.	Name=Tassel_length;B73v2_pos=3:188666905;1allele=A/G;version=Hapmap2;RS=rs832985760;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193740496	193740595	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:188669063;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193742884	193742983	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:188671451;1allele=T/C;version=Hapmap2;RS=rs836533654;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	193791566	193791665	.	+	.	Name=Tassel_length;B73v2_pos=3:188742035;1allele=G/C;version=Hapmap2;RS=rs129365784;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	193793326	193793425	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:188743795;1allele=C/T;version=Hapmap2;RS=rs1064612799;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	193851238	193851337	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:188797147;1allele=G/A;version=Hapmap2;RS=rs129601669;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	193854903	193855002	.	+	.	Name=Tassel_length;B73v2_pos=3:188800812;1allele=/GCCGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193962327	193962426	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:188918940;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	193974106	193974205	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:188923758;1allele=T/C;version=Hapmap2;RS=rs129471667;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	193974106	193974205	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:188923758;1allele=T/C;version=Hapmap2;RS=rs129471667;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	193974106	193974205	.	+	.	Name=Plant_height;B73v2_pos=3:188923758;1allele=T/C;version=Hapmap2;RS=rs129471667;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	193977319	193977418	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:188926971;1allele=A/G;version=Hapmap1;RS=rs132077701;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	193977692	193977791	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:188927344;1allele=C/T;version=Hapmap2;RS=rs835144622;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	194009496	194009595	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:188959152;1allele=A/G;version=Hapmap2;RS=rs129396913;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	194075325	194075424	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189024990;1allele=C/A;version=Hapmap2;RS=rs129569197;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	194078209	194078308	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189027874;1allele=A/C;version=Hapmap2;RS=rs277234002;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	194078253	194078352	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:189027918;1allele=G/T;version=Hapmap2;RS=rs841713800;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	194105510	194105609	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:189055188;1allele=A/G;version=Hapmap2;RS=rs1063196130;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	194270063	194270162	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189218228;1allele=C/T;version=Hapmap1;RS=rs129312300;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	194301488	194301587	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:189248909;1allele=T/C;version=Hapmap2;RS=rs808553239;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	194301754	194301853	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:189249175;1allele=C/G;version=Hapmap2;RS=rs837090692;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	194347769	194347868	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:189297700;1allele=T/A;version=Hapmap2;RS=rs277234345;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	194350499	194350598	.	+	.	Name=Plant_height;B73v2_pos=3:189300430;1allele=T/C;version=Hapmap2;RS=rs1062636482;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	194398001	194398100	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:189341421;1allele=C/G;version=Hapmap2;RS=rs277234401;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	194414652	194414751	.	+	.	Name=Total_amino_acids;B73v2_pos=3:189356777;1allele=T/C;version=Hapmap1;RS=rs132077824;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	194418084	194418183	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:189360209;1allele=C/T;version=Hapmap2;RS=rs826564879;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	194426402	194426501	.	+	.	Name=Cob_diameter;B73v2_pos=3:189368527;1allele=A/G;version=Hapmap2;RS=rs833979447;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	194452187	194452286	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189394312;1allele=C/T;version=Hapmap1;RS=rs1063014365;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	194466991	194467090	.	+	.	Name=Tassel_length;B73v2_pos=3:189417098;1allele=A/G;version=Hapmap2;RS=rs813076590;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	194522806	194522905	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189465232;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	194529277	194529376	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189471703;1allele=A/G;version=Hapmap2;RS=rs132078101;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	194535162	194535262	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189477589;1allele=G/A;version=Hapmap2;RS=rs1063600424;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	194625025	194625124	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:189567386;1allele=A/G;version=Hapmap2;RS=rs833663098;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	194676165	194676264	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:189616462;1allele=G/T;version=Hapmap2;RS=rs804926489;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	194676291	194676390	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:189616588;1allele=C/T;version=Hapmap2;RS=rs823338886;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	194815642	194815741	.	+	.	Name=Glutamate;B73v2_pos=3:189753536;1allele=A/G;version=Hapmap2;RS=rs806180499;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	194910357	194910456	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189848118;1allele=T/C;version=Hapmap2;RS=rs129588365;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	194969118	194969217	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:189906884;1allele=C/T;version=Hapmap2;RS=rs835183262;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	194971926	194972025	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:189909695;1allele=G/A;version=Hapmap2;RS=rs802500180;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	194994962	194995061	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:189932734;1allele=G/A;version=Hapmap2;RS=rs277235192;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	195002394	195002493	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:189940166;1allele=C/T;version=Hapmap2;RS=rs837158804;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	195004082	195004181	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:189941854;1allele=A/C;version=Hapmap2;RS=rs277235276;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	195045524	195045623	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:189982819;1allele=T/C;version=Hapmap2;RS=rs831105008;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	195045837	195045936	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:189983132;1allele=A/T;version=Hapmap2;RS=rs129413606;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	195068652	195068751	.	+	.	Name=Ear_height;B73v2_pos=3:190005950;1allele=C/T;version=Hapmap2;RS=rs801896856;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	195068652	195068751	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:190005950;1allele=C/T;version=Hapmap2;RS=rs801896856;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	195168608	195168707	.	+	.	Name=Height_above_ear;B73v2_pos=3:190089580;1allele=A/G;version=Hapmap2;RS=rs724547393;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	195226629	195226728	.	+	.	Name=Tassel_length;B73v2_pos=3:190221469;1allele=C/A;version=Hapmap2;RS=rs277235827;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	195227760	195227859	.	+	.	Name=Height_above_ear;B73v2_pos=3:190222600;1allele=T/A;version=Hapmap2;RS=rs277235837;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	195227880	195227979	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:190222720;1allele=T/A;version=Hapmap2;RS=rs277235841;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	195228659	195228758	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:190223499;1allele=G/A;version=Hapmap2;RS=rs838196558;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	195302858	195302957	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:190163248;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	195312162	195312261	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:190153943;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	195355674	195355773	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:190279998;1allele=A/G;version=Hapmap2;RS=rs277235931;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	195357037	195357136	.	+	.	Name=Leaf_width;B73v2_pos=3:190281361;1allele=T/C;version=Hapmap2;RS=rs831373488;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	195397396	195397495	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:190322216;1allele=A/G;version=Hapmap2;RS=rs129431571;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	195400349	195400448	.	+	.	Name=Ear_height;B73v2_pos=3:190325160;1allele=T/A;version=Hapmap2;RS=rs1061583078;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	195400452	195400551	.	+	.	Name=Ear_height;B73v2_pos=3:190325263;1allele=T/C;version=Hapmap2;RS=rs1060615706;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	195401208	195401307	.	+	.	Name=Ear_height;B73v2_pos=3:190326017;1allele=C/-;version=Hapmap1;RS=rs132079067;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	195433320	195433419	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:190359402;1allele=G/A;version=Hapmap2;RS=rs836515129;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	195472843	195472942	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:190398926;1allele=C/T;version=Hapmap1;RS=rs132079072;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	195521000	195521099	.	+	.	Name=Ear_row_number;B73v2_pos=3:190447516;1allele=T/C;version=Hapmap1;RS=rs132079156;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	195531867	195531966	.	+	.	Name=Plant_height;B73v2_pos=3:190458382;1allele=C/T;version=Hapmap1;RS=rs132079251;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	195578543	195578642	.	+	.	Name=Tassel_length;B73v2_pos=3:190508254;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	195590164	195590263	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:190496633;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	195590231	195590330	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:190496566;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	195622921	195623020	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:190563864;1allele=C/T;version=Hapmap2;RS=rs129545002;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	195626057	195626156	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:190567000;1allele=G/C;version=Hapmap1;RS=rs132079320;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	195688256	195688355	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:190625020;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	195847963	195848062	.	+	.	Name=Ear_height;B73v2_pos=3:190782608;1allele=T/C;version=Hapmap1;RS=rs129544032;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	195860465	195860564	.	+	.	Name=Fructose;B73v2_pos=3:190795110;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	195992073	195992172	.	+	.	Name=Tassel_length;B73v2_pos=3:190926655;1allele=T/G;version=Hapmap2;RS=rs129476996;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	196184816	196184915	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:191125631;1allele=A/C;version=Hapmap2;RS=rs847800171;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	196258754	196258853	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:191199570;1allele=A/C;version=Hapmap2;RS=rs277237987;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	196431782	196431881	.	+	.	Name=Stalk_strength;B73v2_pos=3:191361233;1allele=G/A;version=Hapmap2;RS=rs807786109;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	196448683	196448782	.	+	.	Name=Stalk_strength;B73v2_pos=3:191374705;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	196931543	196931642	.	+	.	Name=Height_above_ear;B73v2_pos=3:191838212;1allele=T/A;version=Hapmap2;RS=rs823519850;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	196932272	196932371	.	+	.	Name=Ear_height;B73v2_pos=3:191838941;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	196932423	196932522	.	+	.	Name=Stalk_strength;B73v2_pos=3:191839092;1allele=G/A;version=Hapmap2;RS=rs836502565;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	197057897	197057996	.	+	.	Name=Stalk_strength;B73v2_pos=3:191958766;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	197187597	197187696	.	+	.	Name=Fructose;B73v2_pos=3:192096292;1allele=A/T;version=Hapmap2;RS=rs834196030;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	197384615	197384714	.	+	.	Name=Fructose;B73v2_pos=3:192265699;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	198208750	198208849	.	+	.	Name=Ear_row_number;B73v2_pos=3:193124066;1allele=G/T;version=Hapmap2;RS=rs818278946;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	198252805	198252903	.	+	.	Name=Fructose;B73v2_pos=3:193167671;1allele=A/G;version=Hapmap2;RS=rs839999967;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	198253740	198253839	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:23617331;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	198658150	198658249	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:193583223;1allele=T/C;version=Hapmap2;RS=rs277242625;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	198705833	198705932	.	+	.	Name=Stalk_strength;B73v2_pos=3:193626335;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	198894659	198894758	.	+	.	Name=Starch;B73v2_pos=3:193799804;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	198897912	198898011	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:193796551;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	199554663	199554762	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:194455908;1allele=C/T;version=Hapmap2;RS=rs129380268;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	199554663	199554762	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:194455908;1allele=C/T;version=Hapmap2;RS=rs129380268;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	199554663	199554762	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:194455908;1allele=C/T;version=Hapmap2;RS=rs129380268;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	199573021	199573120	.	+	.	Name=Ear_height;B73v2_pos=3:194475918;1allele=A/G;version=Hapmap2;RS=rs129395034;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	199573021	199573120	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:194475918;1allele=A/G;version=Hapmap2;RS=rs129395034;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	199649112	199649211	.	+	.	Name=Plant_height;B73v2_pos=3:194551488;1allele=G/A;version=Hapmap2;RS=rs849480233;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	199757039	199757138	.	+	.	Name=Height_above_ear;B73v2_pos=3:194663212;1allele=A/G;version=Hapmap2;RS=rs1064467096;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	199813225	199813324	.	+	.	Name=Fructose;B73v2_pos=3:194726202;1allele=/TC;version=Hapmap1;RS=rs826578414;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	199925064	199925163	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:194836111;1allele=T/A;version=Hapmap2;RS=rs277244691;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	200114752	200114851	.	+	.	Name=Fructose;B73v2_pos=3:195032722;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	200118493	200118592	.	+	.	Name=Plant_height;B73v2_pos=3:195028981;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	200185623	200185722	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:195097659;1allele=A/G;version=Hapmap2;RS=rs129523451;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	200352387	200352486	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:195263842;1allele=T/C;version=Hapmap2;RS=rs831367825;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	200356682	200356781	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:195268137;1allele=C/T;version=Hapmap2;RS=rs129281605;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	200377960	200378059	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:195289010;1allele=A/T;version=Hapmap2;RS=rs802015873;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	200600458	200600557	.	+	.	Name=Starch;B73v2_pos=3:195497373;1allele=G/T;version=Hapmap2;RS=rs820112387;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	200709290	200709389	.	+	.	Name=Glucose;B73v2_pos=3:195609448;1allele=A/T;version=Hapmap2;RS=rs129525364;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	200763430	200763529	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:195665162;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	200792152	200792251	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:195693888;1allele=-/+;version=Hapmap2;RS=rs845043694;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	200794080	200794179	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:195695816;1allele=T/C;version=Hapmap2;RS=rs277245934;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	200827801	200827900	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:195729538;1allele=T/C;version=Hapmap2;RS=rs827669596;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	200831653	200831752	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:195733391;1allele=G/C;version=Hapmap1;RS=rs818109285;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	200831653	200831752	.	+	.	Name=Plant_height;B73v2_pos=3:195733391;1allele=G/C;version=Hapmap1;RS=rs818109285;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	200888496	200888595	.	+	.	Name=Ear_row_number;B73v2_pos=3:195790389;1allele=C/T;version=Hapmap2;RS=rs827162724;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	200888959	200889058	.	+	.	Name=Ear_row_number;B73v2_pos=3:195790852;1allele=G/A;version=Hapmap2;RS=rs129521038;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	201045218	201045317	.	+	.	Name=Plant_height;B73v2_pos=3:195945011;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	201045356	201045455	.	+	.	Name=Plant_height;B73v2_pos=3:195945149;1allele=C/G;version=Hapmap2;RS=rs132083445;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	201045724	201045823	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:195945517;1allele=G/C;version=Hapmap1;RS=rs132083453;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	201046596	201046695	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:195946389;1allele=A/G;version=Hapmap2;RS=rs129474531;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	201064091	201064190	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:195963884;1allele=C/T;version=Hapmap2;RS=rs129308731;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	201167405	201167504	.	+	.	Name=Days_to_silk;B73v2_pos=3:196091215;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	201167459	201167558	.	+	.	Name=Ear_row_number;B73v2_pos=3:196091269;1allele=G/C;version=Hapmap2;RS=rs129414418;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	201168391	201168490	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:196092201;1allele=T/A;version=Hapmap2;RS=rs277246422;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	201168868	201168967	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:196092678;1allele=A/G;version=Hapmap2;RS=rs834299226;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	201177222	201177321	.	+	.	Name=Stalk_strength;B73v2_pos=3:196100476;1allele=T/C;version=Hapmap2;RS=rs812574607;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	201179341	201179440	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:196102595;1allele=A/T;version=Hapmap2;RS=rs277246482;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	201194240	201194339	.	+	.	Name=Days_to_silk;B73v2_pos=3:196117502;1allele=G/A;version=Hapmap1;RS=rs132083882;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	201211585	201211684	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:196134849;1allele=G/A;version=Hapmap2;RS=rs129457248;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	201220608	201220707	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:196143872;1allele=T/C;version=Hapmap2;RS=rs129608226;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	201226614	201226713	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:196149879;1allele=A/G;version=Hapmap2;RS=rs129603404;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	201229968	201230067	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:196153233;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	201556391	201556490	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:196392664;1allele=A/G;version=Hapmap2;RS=rs1060925486;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	201588959	201589058	.	+	.	Name=Protein;B73v2_pos=3:196424753;1allele=C/T;version=Hapmap2;RS=rs834707761;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	201617657	201617756	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:196453453;1allele=T/C;version=Hapmap2;RS=rs818561013;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	201651202	201651301	.	+	.	Name=Stalk_strength;B73v2_pos=3:196487001;1allele=T/C;version=Hapmap2;RS=rs835663372;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	202073321	202073420	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:196911516;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202180915	202181014	.	+	.	Name=Days_to_silk;B73v2_pos=3:197018136;1allele=C/T;version=Hapmap2;RS=rs129403897;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	202213784	202213883	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:197050181;1allele=A/T;version=Hapmap2;RS=rs843287369;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	202384334	202384433	.	+	.	Name=Starch;B73v2_pos=3:197212185;1allele=T/G;version=Hapmap2;RS=rs836601999;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	202468105	202468204	.	+	.	Name=Days_to_silk;B73v2_pos=3:197277408;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202597187	202597286	.	+	.	Name=Days_to_silk;B73v2_pos=3:197419181;1allele=C/T;version=Hapmap2;RS=rs277249343;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	202607271	202607370	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:197429268;1allele=C/T;version=Hapmap2;RS=rs1063844874;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	202623470	202623569	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:197445141;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202664793	202664892	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:197486651;1allele=G/T;version=Hapmap2;RS=rs277249408;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	202667383	202667482	.	+	.	Name=Days_to_silk;B73v2_pos=3:197489165;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202669176	202669275	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:197490958;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202669176	202669275	.	+	.	Name=Days_to_silk;B73v2_pos=3:197490958;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202687838	202687937	.	+	.	Name=Leaf_width;B73v2_pos=3:197509620;1allele=G/A;version=Hapmap2;RS=rs811146141;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	202696417	202696516	.	+	.	Name=Leaf_width;B73v2_pos=3:197518199;1allele=G/A;version=Hapmap2;RS=rs849531896;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	202696655	202696754	.	+	.	Name=Leaf_width;B73v2_pos=3:197518437;1allele=C/T;version=Hapmap2;RS=rs823307737;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	202700436	202700535	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:197522218;1allele=T/C;version=Hapmap2;RS=rs1061896109;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	202717497	202717596	.	+	.	Name=Days_to_silk;B73v2_pos=3:197562095;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202735969	202736068	.	+	.	Name=Leaf_width;B73v2_pos=3:197574581;1allele=C/T;version=Hapmap2;RS=rs129392723;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	202794886	202794985	.	+	.	Name=Ear_row_number;B73v2_pos=3:197636578;1allele=T/A;version=Hapmap2;RS=rs841403687;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	202843134	202843233	.	+	.	Name=Days_to_silk;B73v2_pos=3:197676682;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	202874805	202874904	.	+	.	Name=Days_to_silk;B73v2_pos=3:197707665;1allele=A/G;version=Hapmap2;RS=rs1062500920;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	202983824	202983923	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:197806750;1allele=G/A;version=Hapmap2;RS=rs1063050008;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	202983824	202983923	.	+	.	Name=Days_to_silk;B73v2_pos=3:197806750;1allele=G/A;version=Hapmap2;RS=rs1063050008;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	203091755	203091854	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:197918656;1allele=A/C;version=Hapmap2;RS=rs277250534;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	203128881	203128980	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:197981674;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	203160923	203161022	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:197944352;1allele=G/T;version=Hapmap2;RS=rs835848380;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	203171689	203171788	.	+	.	Name=Stalk_strength;B73v2_pos=3:197955118;1allele=G/A;version=Hapmap2;RS=rs277250700;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	203171694	203171793	.	+	.	Name=Stalk_strength;B73v2_pos=3:197955123;1allele=G/A;version=Hapmap2;RS=rs833669593;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	203400266	203400365	.	+	.	Name=Ear_row_number;B73v2_pos=3:198217772;1allele=T/C;version=Hapmap2;RS=rs815161313;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	203412120	203412219	.	+	.	Name=Fructose;B73v2_pos=3:198229629;1allele=G/A;version=Hapmap2;RS=rs829001460;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	203554172	203554271	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:198390776;1allele=G/C;version=Hapmap1;RS=rs132086111;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	203832157	203832256	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198666524;1allele=A/G;version=Hapmap2;RS=rs1061501698;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	203870724	203870823	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198705092;1allele=C/T;version=Hapmap2;RS=rs827856211;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	203873918	203874017	.	+	.	Name=Days_to_silk;B73v2_pos=3:198708360;1allele=T/C;version=Hapmap2;RS=rs1062808660;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	203873918	203874017	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:198708360;1allele=T/C;version=Hapmap2;RS=rs1062808660;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	203885004	203885103	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198719239;1allele=C/T;version=Hapmap2;RS=rs129382906;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	203927317	203927416	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:198736725;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204041907	204042006	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198887754;1allele=A/T;version=Hapmap2;RS=rs827879247;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	204043443	204043542	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198889291;1allele=G/T;version=Hapmap1;RS=rs132086445;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204050749	204050848	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198896597;1allele=T/G;version=Hapmap2;RS=rs1062534186;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	204055323	204055422	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198901171;1allele=T/C;version=Hapmap2;RS=rs277252288;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	204059131	204059230	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198904979;1allele=T/G;version=Hapmap2;RS=rs129309850;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	204063462	204063561	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198909310;1allele=T/G;version=Hapmap2;RS=rs129362646;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	204112875	204112974	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198971588;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204143429	204143528	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198941035;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204183214	204183313	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:199034677;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204273306	204273405	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199109904;1allele=A/T;version=Hapmap2;RS=rs1062495470;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	204276264	204276363	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199112862;1allele=G/T;version=Hapmap2;RS=rs819696985;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	204286679	204286778	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199123278;1allele=G/A;version=Hapmap2;RS=rs832661235;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204328449	204328548	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:199161863;1allele=T/C;version=Hapmap2;RS=rs849024185;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	204340380	204340479	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199173795;1allele=A/G;version=Hapmap2;RS=rs277254039;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204348690	204348789	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199182108;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204400021	204400120	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199232147;1allele=G/A;version=Hapmap2;RS=rs839301427;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	204403291	204403390	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199235417;1allele=C/T;version=Hapmap2;RS=rs803906420;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	204412544	204412643	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:199244670;1allele=T/C;version=Hapmap2;RS=rs129329998;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	204413809	204413908	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199245935;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204418190	204418289	.	+	.	Name=Days_to_silk;B73v2_pos=3:199250316;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204428917	204429016	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199261043;1allele=A/G;version=Hapmap2;RS=rs727401823;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204430674	204430773	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199262800;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204435430	204435529	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199267556;1allele=G/A;version=Hapmap2;RS=rs132086963;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	204435725	204435824	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199267851;1allele=/AGTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204439063	204439162	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199271189;1allele=A/T;version=Hapmap2;RS=rs810996686;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	204446987	204447086	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199279113;1allele=C/-;version=Hapmap1;RS=rs132087026;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	204471630	204471729	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199292414;1allele=G/A;version=Hapmap2;RS=rs810316240;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	204509809	204509908	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199336608;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204509869	204509968	.	+	.	Name=Days_to_silk;B73v2_pos=3:199336668;1allele=T/C;version=Hapmap2;RS=rs129305997;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	204526051	204526150	.	+	.	Name=Stalk_strength;B73v2_pos=3:199352855;1allele=C/T;version=Hapmap2;RS=rs815095100;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	204579401	204579500	.	+	.	Name=Days_to_silk;B73v2_pos=3:199481418;1allele=T/A;version=Hapmap2;RS=rs277254619;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	204581967	204582066	.	+	.	Name=Days_to_silk;B73v2_pos=3:199483984;1allele=G/T;version=Hapmap2;RS=rs277254631;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	204582258	204582357	.	+	.	Name=Days_to_silk;B73v2_pos=3:199484275;1allele=C/T;version=Hapmap2;RS=rs129368194;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	204583199	204583298	.	+	.	Name=Days_to_silk;B73v2_pos=3:199485216;1allele=A/G;version=Hapmap2;RS=rs819990029;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204660983	204661082	.	+	.	Name=Days_to_silk;B73v2_pos=3:199451696;1allele=G/A;version=Hapmap2;RS=rs1061936100;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	204733948	204734047	.	+	.	Name=Protein;B73v2_pos=3:199553234;1allele=T/C;version=Hapmap2;RS=rs826899951;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	204745095	204745194	.	+	.	Name=Days_to_silk;B73v2_pos=3:199564381;1allele=A/G;version=Hapmap2;RS=rs277254801;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204788340	204788439	.	+	.	Name=Leaf_width;B73v2_pos=3:199609167;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204790636	204790735	.	+	.	Name=Days_to_silk;B73v2_pos=3:199611456;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204820712	204820811	.	+	.	Name=Stalk_strength;B73v2_pos=3:199641593;1allele=G/A;version=Hapmap2;RS=rs836195375;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204824498	204824597	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199645378;1allele=CA/;version=Hapmap1;RS=rs835036591;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	204824670	204824769	.	+	.	Name=Stalk_strength;B73v2_pos=3:199645550;1allele=G/A;version=Hapmap2;RS=rs840874163;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204828764	204828863	.	+	.	Name=Leaf_width;B73v2_pos=3:199649840;1allele=T/C;version=Hapmap2;RS=rs277254961;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	204829050	204829149	.	+	.	Name=Leaf_width;B73v2_pos=3:199650126;1allele=G/A;version=Hapmap2;RS=rs132087547;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	204843508	204843607	.	+	.	Name=Height_above_ear;B73v2_pos=3:199664584;1allele=G/A;version=Hapmap2;RS=rs132087599;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	204925650	204925749	.	+	.	Name=Malate;B73v2_pos=3:199747496;1allele=C/G;version=Hapmap2;RS=rs844783853;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	204963523	204963622	.	+	.	Name=Stalk_strength;B73v2_pos=3:199814079;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	204963523	204963622	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:199814079;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205005204	205005303	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199825116;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205006011	205006110	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199825923;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205006011	205006110	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:199825923;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205007345	205007444	.	+	.	Name=Days_to_silk;B73v2_pos=3:199827257;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205048146	205048245	.	+	.	Name=Days_to_silk;B73v2_pos=3:199868074;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205048202	205048301	.	+	.	Name=Cob_diameter;B73v2_pos=3:199868130;1allele=T/C;version=Hapmap2;RS=rs277255438;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	205160327	205160426	.	+	.	Name=Height_above_ear;B73v2_pos=3:199977392;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205161833	205161932	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:199978898;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205208125	205208224	.	+	.	Name=Days_to_silk;B73v2_pos=3:200123205;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205272440	205272539	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:200067507;1allele=A/T;version=Hapmap2;RS=rs815336822;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	205312049	205312148	.	+	.	Name=Leaf_width;B73v2_pos=3:200028399;1allele=T/C;version=Hapmap2;RS=rs815149479;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	205423849	205423948	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:200193940;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205423855	205423954	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:200193946;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205604210	205604309	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:200373898;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205604959	205605058	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:200374647;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205605229	205605328	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:200374917;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205613658	205613757	.	+	.	Name=Fructose;B73v2_pos=3:200383346;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	205663820	205663919	.	+	.	Name=Days_to_silk;B73v2_pos=3:200433577;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206247774	206247873	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:201002176;1allele=A/C;version=Hapmap2;RS=rs129612045;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	206253421	206253520	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:201007823;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206307262	206307361	.	+	.	Name=Leaf_width;B73v2_pos=3:201061668;1allele=G/A;version=Hapmap1;RS=rs129300987;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	206311270	206311369	.	+	.	Name=Malate;B73v2_pos=3:201065676;1allele=C/T;version=Hapmap2;RS=rs811118075;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	206340357	206340456	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:201094773;1allele=T/G;version=Hapmap2;RS=rs129526209;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	206422602	206422701	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:201174562;1allele=T/C;version=Hapmap2;RS=rs820258565;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	206430801	206430900	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:201185502;1allele=A/G;version=Hapmap2;RS=rs132089097;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206430943	206431042	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:201185644;1allele=C/T;version=Hapmap2;RS=rs825324961;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	206477353	206477452	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:201230189;1allele=T/G;version=Hapmap1;RS=rs132089328;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	206479171	206479270	.	+	.	Name=Leaf_width;B73v2_pos=3:201232007;1allele=G/C;version=Hapmap2;RS=rs132089375;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	206497083	206497182	.	+	.	Name=Leaf_width;B73v2_pos=3:201249902;1allele=T/A;version=Hapmap2;RS=rs129505735;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	206497514	206497613	.	+	.	Name=Leaf_width;B73v2_pos=3:201250333;1allele=-/C;version=Hapmap1;RS=rs830832654;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	206497592	206497691	.	+	.	Name=Leaf_width;B73v2_pos=3:201250411;1allele=A/G;version=Hapmap2;RS=rs132089417;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	206516681	206516780	.	+	.	Name=Leaf_width;B73v2_pos=3:201269501;1allele=A/G;version=Hapmap2;RS=rs815854830;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206546225	206546324	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:201298422;1allele=G/A;version=Hapmap2;RS=rs1061397343;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206547385	206547484	.	+	.	Name=Protein;B73v2_pos=3:201299582;1allele=T/C;version=Hapmap2;RS=rs831013034;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	206556390	206556489	.	+	.	Name=Days_to_silk;B73v2_pos=3:201308583;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206557096	206557195	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:201309289;1allele=/GCTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206559770	206559869	.	+	.	Name=Days_to_silk;B73v2_pos=3:201311963;1allele=T/A;version=Hapmap2;RS=rs277257862;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	206564053	206564152	.	+	.	Name=Days_to_silk;B73v2_pos=3:201316249;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206567813	206567912	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:201320009;1allele=G/C;version=Hapmap1;RS=rs132089790;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	206574789	206574888	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:201326985;1allele=C/T;version=Hapmap2;RS=rs816050855;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	206617764	206617863	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:201346112;1allele=C/T;version=Hapmap2;RS=rs829970830;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	206639257	206639356	.	+	.	Name=Ear_row_number;B73v2_pos=3:201367951;1allele=T/G;version=Hapmap2;RS=rs824336733;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	206655072	206655171	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:201381422;1allele=A/G;version=Hapmap2;RS=rs725546986;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206684750	206684849	.	+	.	Name=Tassel_length;B73v2_pos=3:201429710;1allele=G/A;version=Hapmap2;RS=rs829277621;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	206684750	206684849	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:201429710;1allele=G/A;version=Hapmap2;RS=rs829277621;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	206721358	206721454	.	+	.	Name=Leaf_width;B73v2_pos=3:201466322;1allele=T/C;version=Hapmap2;RS=rs277258042;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	206786567	206786666	.	+	.	Name=Leaf_width;B73v2_pos=3:201539024;1allele=A/G;version=Hapmap2;RS=rs843415936;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206786567	206786666	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:201539024;1allele=A/G;version=Hapmap2;RS=rs843415936;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206786615	206786714	.	+	.	Name=Leaf_width;B73v2_pos=3:201539072;1allele=T/A;version=Hapmap2;RS=rs822014495;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	206786692	206786791	.	+	.	Name=Leaf_width;B73v2_pos=3:201539149;1allele=G/A;version=Hapmap2;RS=rs832340594;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	206793547	206793646	.	+	.	Name=Days_to_silk;B73v2_pos=3:201546004;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206794131	206794230	.	+	.	Name=Height_above_ear;B73v2_pos=3:201546588;1allele=C/T;version=Hapmap2;RS=rs807932525;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	206794138	206794237	.	+	.	Name=Height_above_ear;B73v2_pos=3:201546595;1allele=G/T;version=Hapmap2;RS=rs813924663;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	206794253	206794352	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:201546710;1allele=G/T;version=Hapmap2;RS=rs812651299;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	206806641	206806740	.	+	.	Name=Days_to_silk;B73v2_pos=3:201559101;1allele=A/G;version=Hapmap2;RS=rs849970308;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	206812197	206812296	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:201564634;1allele=A/G;version=Hapmap2;RS=rs848907497;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206812229	206812328	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:201564666;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206812229	206812328	.	+	.	Name=Days_to_silk;B73v2_pos=3:201564666;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206817090	206817189	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:201569527;1allele=A/G;version=Hapmap2;RS=rs836667063;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206828643	206828742	.	+	.	Name=Days_to_silk;B73v2_pos=3:201582113;1allele=C/T;version=Hapmap2;RS=rs1063843420;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	206828766	206828865	.	+	.	Name=Days_to_silk;B73v2_pos=3:201582236;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206829744	206829843	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:201583214;1allele=G/T;version=Hapmap2;RS=rs832842754;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	206831571	206831670	.	+	.	Name=Height_above_ear;B73v2_pos=3:201585041;1allele=A/G;version=Hapmap2;RS=rs1060697728;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	206832674	206832773	.	+	.	Name=Leaf_width;B73v2_pos=3:201586144;1allele=G/A;version=Hapmap2;RS=rs815531513;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	206940839	206940938	.	+	.	Name=Malate;B73v2_pos=3:201636811;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	206952989	206953088	.	+	.	Name=Tassel_length;B73v2_pos=3:201691302;1allele=G/A;version=Hapmap2;RS=rs129612891;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207057542	207057641	.	+	.	Name=Protein;B73v2_pos=3:201790625;1allele=A/G;version=Hapmap2;RS=rs277259075;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207057713	207057812	.	+	.	Name=Protein;B73v2_pos=3:201790796;1allele=C/A;version=Hapmap1;RS=rs132090227;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	207062628	207062727	.	+	.	Name=Protein;B73v2_pos=3:201795711;1allele=T/G;version=Hapmap2;RS=rs129530156;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	207063226	207063325	.	+	.	Name=Protein;B73v2_pos=3:201796309;1allele=A/G;version=Hapmap2;RS=rs277259197;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207091631	207091730	.	+	.	Name=Protein;B73v2_pos=3:201824717;1allele=A/G;version=Hapmap2;RS=rs277259244;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207158054	207158153	.	+	.	Name=Tassel_length;B73v2_pos=3:201891405;1allele=C/T;version=Hapmap2;RS=rs277259442;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	207170638	207170737	.	+	.	Name=Tassel_length;B73v2_pos=3:201903989;1allele=C/T;version=Hapmap2;RS=rs277259602;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	207177337	207177436	.	+	.	Name=Height_above_ear;B73v2_pos=3:201910688;1allele=A/G;version=Hapmap1;RS=rs132090331;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207205053	207205152	.	+	.	Name=Tassel_length;B73v2_pos=3:201938402;1allele=G/A;version=Hapmap1;RS=rs132090424;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	207207148	207207247	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:201939708;1allele=G/A;version=Hapmap2;RS=rs804163762;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207222775	207222874	.	+	.	Name=Tassel_length;B73v2_pos=1:241974312;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	207288648	207288747	.	+	.	Name=Leaf_width;B73v2_pos=3:202022062;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	207373660	207373759	.	+	.	Name=Cob_diameter;B73v2_pos=3:202107037;1allele=A/T;version=Hapmap2;RS=rs820936881;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	207376029	207376128	.	+	.	Name=Malate;B73v2_pos=3:202109406;1allele=T/C;version=Hapmap2;RS=rs1062767743;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	207380444	207380543	.	+	.	Name=Malate;B73v2_pos=3:202113809;1allele=A/G;version=Hapmap2;RS=rs132090765;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207423784	207423883	.	+	.	Name=Tassel_length;B73v2_pos=3:202140574;1allele=T/C;version=Hapmap2;RS=rs129441946;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	207424793	207424892	.	+	.	Name=Cob_diameter;B73v2_pos=3:202141583;1allele=C/T;version=Hapmap2;RS=rs277260162;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	207487122	207487221	.	+	.	Name=Cob_diameter;B73v2_pos=3:202215831;1allele=T/C;version=Hapmap2;RS=rs803481563;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	207493561	207493660	.	+	.	Name=Cob_diameter;B73v2_pos=3:202222268;1allele=G/T;version=Hapmap2;RS=rs843131313;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	207494274	207494373	.	+	.	Name=Cob_diameter;B73v2_pos=3:202222981;1allele=A/G;version=Hapmap2;RS=rs810844930;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207708591	207708690	.	+	.	Name=Malate;B73v2_pos=3:202435983;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	207712503	207712602	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:202439896;1allele=G/A;version=Hapmap2;RS=rs823929990;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	207890155	207890254	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:202562366;1allele=C/A;version=Hapmap2;RS=rs277261155;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	207951892	207951991	.	+	.	Name=Tassel_length;B73v2_pos=3:202624311;1allele=A/T;version=Hapmap2;RS=rs811004931;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	208034992	208035091	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:202709674;1allele=T/C;version=Hapmap2;RS=rs725419326;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	208092705	208092804	.	+	.	Name=Tassel_length;B73v2_pos=3:202766349;1allele=T/A;version=Hapmap2;RS=rs821578707;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	208092741	208092840	.	+	.	Name=Tassel_length;B73v2_pos=3:202766385;1allele=A/G;version=Hapmap2;RS=rs808641371;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	208117922	208118021	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:202791154;1allele=C/T;version=Hapmap2;RS=rs842969193;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	208156114	208156213	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:202829262;1allele=C/G;version=Hapmap2;RS=rs826815249;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	208159690	208159789	.	+	.	Name=Malate;B73v2_pos=3:202832810;1allele=C/A;version=Hapmap2;RS=rs805455825;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	208604294	208604393	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:203283336;1allele=/AG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	208763959	208764058	.	+	.	Name=Days_to_silk;B73v2_pos=3:203457208;1allele=T/C;version=Hapmap2;RS=rs129386182;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	208768354	208768453	.	+	.	Name=Days_to_silk;B73v2_pos=3:203461604;1allele=G/T;version=Hapmap2;RS=rs1062882690;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	209275802	209275901	.	+	.	Name=Malate;B73v2_pos=3:204067472;1allele=C/G;version=Hapmap2;RS=rs129478396;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	209319088	209319187	.	+	.	Name=Leaf_length;B73v2_pos=3:204055587;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	209320239	209320338	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:204054436;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	209431926	209432025	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:204124779;1allele=G/A;version=Hapmap2;RS=rs129511287;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	209461071	209461170	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204154405;1allele=C/T;version=Hapmap1;RS=rs132092367;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	209461101	209461200	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204154435;1allele=T/G;version=Hapmap2;RS=rs823362995;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	209461235	209461334	.	+	.	Name=Leaf_length;B73v2_pos=3:204154569;1allele=G/A;version=Hapmap2;RS=rs809347557;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	209461236	209461335	.	+	.	Name=Leaf_length;B73v2_pos=3:204154570;1allele=G/C;version=Hapmap2;RS=rs816906784;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	209461377	209461476	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204154711;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	209461400	209461499	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204154734;1allele=A/C;version=Hapmap2;RS=rs724824292;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	209590656	209590755	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204283814;1allele=G/T;version=Hapmap2;RS=rs836423320;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	209595332	209595431	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:204288490;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	209804119	209804218	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:204462783;1allele=G/A;version=Hapmap2;RS=rs811251861;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	209818495	209818594	.	+	.	Name=Ear_height;B73v2_pos=3:204477157;1allele=C/T;version=Hapmap2;RS=rs277262694;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	209921594	209921693	.	+	.	Name=Tassel_length;B73v2_pos=3:204581065;1allele=G/T;version=Hapmap2;RS=rs846207311;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	209922009	209922108	.	+	.	Name=Tassel_length;B73v2_pos=3:204581480;1allele=T/C;version=Hapmap2;RS=rs808626427;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	209926515	209926614	.	+	.	Name=Tassel_length;B73v2_pos=3:204585987;1allele=C/G;version=Hapmap2;RS=rs129266000;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	209928122	209928221	.	+	.	Name=Tassel_length;B73v2_pos=3:204587594;1allele=T/C;version=Hapmap2;RS=rs847454039;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	209980081	209980180	.	+	.	Name=Leaf_length;B73v2_pos=3:204636557;1allele=C/T;version=Hapmap2;RS=rs129287484;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	209980355	209980454	.	+	.	Name=Leaf_length;B73v2_pos=3:204636831;1allele=C/T;version=Hapmap2;RS=rs837897361;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	209980622	209980721	.	+	.	Name=Tassel_length;B73v2_pos=3:204637098;1allele=A/G;version=Hapmap2;RS=rs842098636;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	209981401	209981500	.	+	.	Name=Tassel_length;B73v2_pos=3:204637877;1allele=C/G;version=Hapmap2;RS=rs845555951;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	209983438	209983537	.	+	.	Name=Leaf_length;B73v2_pos=3:204639914;1allele=G/A;version=Hapmap2;RS=rs132093056;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	209984451	209984550	.	+	.	Name=Leaf_length;B73v2_pos=3:204640927;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	209988422	209988521	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:204644898;1allele=G/A;version=Hapmap1;RS=rs132093106;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	209991257	209991356	.	+	.	Name=Leaf_length;B73v2_pos=3:204647733;1allele=/CTCCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	209993929	209994028	.	+	.	Name=Leaf_length;B73v2_pos=3:204650405;1allele=G/A;version=Hapmap2;RS=rs807618669;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	210012842	210012896	.	+	.	Name=Leaf_length;B73v2_pos=3:204669396;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210036263	210036362	.	+	.	Name=Tassel_length;B73v2_pos=3:204692863;1allele=C/T;version=Hapmap2;RS=rs277263152;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	210066599	210066698	.	+	.	Name=Tassel_length;B73v2_pos=3:204722457;1allele=C/A;version=Hapmap2;RS=rs1063577496;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	210074182	210074281	.	+	.	Name=Tassel_length;B73v2_pos=3:204730044;1allele=A/C;version=Hapmap2;RS=rs810112573;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	210089589	210089688	.	+	.	Name=Days_to_silk;B73v2_pos=3:204745457;1allele=T/C;version=Hapmap2;RS=rs818292029;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	210114144	210114242	.	+	.	Name=Days_to_silk;B73v2_pos=3:204825726;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210114500	210114599	.	+	.	Name=Ear_row_number;B73v2_pos=3:204825369;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210122397	210122496	.	+	.	Name=Tassel_length;B73v2_pos=3:204817470;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210135680	210135779	.	+	.	Name=Tassel_length;B73v2_pos=3:204807277;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210144205	210144304	.	+	.	Name=Days_to_silk;B73v2_pos=3:204798749;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210176339	210176438	.	+	.	Name=Tassel_length;B73v2_pos=3:204776957;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210180550	210180649	.	+	.	Name=Tassel_length;B73v2_pos=3:204781168;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210189942	210190041	.	+	.	Name=Ear_row_number;B73v2_pos=3:204790163;1allele=G/A;version=Hapmap2;RS=rs830253451;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	210192716	210192815	.	+	.	Name=Ear_row_number;B73v2_pos=3:204792937;1allele=C/T;version=Hapmap2;RS=rs129571809;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	210194521	210194620	.	+	.	Name=Days_to_silk;B73v2_pos=3:204794742;1allele=A/C;version=Hapmap1;RS=rs129508290;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	210198997	210199096	.	+	.	Name=Tassel_length;B73v2_pos=3:204851972;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210199269	210199368	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204852244;1allele=G/A;version=Hapmap2;RS=rs727120744;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	210208751	210208850	.	+	.	Name=Tassel_length;B73v2_pos=3:204863274;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210249868	210249967	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204893954;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210254407	210254506	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:204889415;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210291126	210291225	.	+	.	Name=Leaf_width;B73v2_pos=3:204917456;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210306575	210306674	.	+	.	Name=Days_to_silk;B73v2_pos=3:204958972;1allele=C/T;version=Hapmap2;RS=rs1061825821;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	210345656	210345755	.	+	.	Name=Tassel_length;B73v2_pos=3:204998708;1allele=G/A;version=Hapmap1;RS=rs132093373;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	210346807	210346906	.	+	.	Name=Tassel_length;B73v2_pos=3:204999859;1allele=G/C;version=Hapmap2;RS=rs277263254;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	210461255	210461354	.	+	.	Name=Tassel_length;B73v2_pos=3:205107943;1allele=C/T;version=Hapmap2;RS=rs724257606;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	210465430	210465529	.	+	.	Name=Tassel_length;B73v2_pos=3:205112478;1allele=G/C;version=Hapmap2;RS=rs842564395;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	210497845	210497944	.	+	.	Name=Tassel_length;B73v2_pos=3:205145259;1allele=G/A;version=Hapmap2;RS=rs833782879;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	210498257	210498356	.	+	.	Name=Leaf_length;B73v2_pos=3:205145671;1allele=G/A;version=Hapmap2;RS=rs804631044;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	210498441	210498540	.	+	.	Name=Leaf_length;B73v2_pos=3:205145855;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210518084	210518183	.	+	.	Name=Days_to_silk;B73v2_pos=3:205157649;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210572910	210573009	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:205211700;1allele=C/T;version=Hapmap2;RS=rs129493887;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	210572910	210573009	.	+	.	Name=Days_to_silk;B73v2_pos=3:205211700;1allele=C/T;version=Hapmap2;RS=rs129493887;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	210574749	210574848	.	+	.	Name=Days_to_silk;B73v2_pos=3:205213539;1allele=A/C;version=Hapmap2;RS=rs807496935;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	210598180	210598279	.	+	.	Name=Cob_diameter;B73v2_pos=3:205237060;1allele=G/A;version=Hapmap2;RS=rs815965300;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	210602801	210602900	.	+	.	Name=Days_to_silk;B73v2_pos=3:205241681;1allele=G/A;version=Hapmap2;RS=rs129420146;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	210604621	210604720	.	+	.	Name=Protein;B73v2_pos=3:205243501;1allele=A/C;version=Hapmap1;RS=rs132093625;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	210605095	210605194	.	+	.	Name=Days_to_silk;B73v2_pos=3:205243975;1allele=G/C;version=Hapmap2;RS=rs129433907;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	210606228	210606327	.	+	.	Name=Leaf_length;B73v2_pos=3:205245108;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210607468	210607567	.	+	.	Name=Days_to_silk;B73v2_pos=3:205246347;1allele=G/A;version=Hapmap2;RS=rs132093564;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	210789484	210789583	.	+	.	Name=Ear_row_number;B73v2_pos=3:205304885;1allele=G/A;version=Hapmap2;RS=rs277263734;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	210793303	210793402	.	+	.	Name=Ear_row_number;B73v2_pos=3:205308704;1allele=A/G;version=Hapmap2;RS=rs1064240546;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	210902303	210902402	.	+	.	Name=Cob_diameter;B73v2_pos=3:205398352;1allele=A/T;version=Hapmap2;RS=rs809991688;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	210953044	210953143	.	+	.	Name=Glutamate;B73v2_pos=3:205435338;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	210993500	210993599	.	+	.	Name=Cob_diameter;B73v2_pos=3:205473264;1allele=G/T;version=Hapmap2;RS=rs821517289;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	211051992	211052091	.	+	.	Name=Cob_diameter;B73v2_pos=3:205537251;1allele=T/C;version=Hapmap2;RS=rs823016818;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	211130502	211130601	.	+	.	Name=Cob_diameter;B73v2_pos=3:205699010;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	211175528	211175627	.	+	.	Name=Cob_diameter;B73v2_pos=3:205626301;1allele=C/T;version=Hapmap2;RS=rs725762915;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	211181062	211181161	.	+	.	Name=Tassel_length;B73v2_pos=3:205631835;1allele=T/C;version=Hapmap1;RS=rs129579545;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	211181866	211181965	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:205632639;1allele=A/G;version=Hapmap2;RS=rs129467264;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	211194245	211194344	.	+	.	Name=Tassel_length;B73v2_pos=3:205646849;1allele=A/G;version=Hapmap2;RS=rs277264541;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	211550489	211550588	.	+	.	Name=Tassel_length;B73v2_pos=3:206015322;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	212041356	212041455	.	+	.	Name=Leaf_length;B73v2_pos=3:206526126;1allele=C/T;version=Hapmap2;RS=rs820426520;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	212059510	212059609	.	+	.	Name=Glutamate;B73v2_pos=3:206544278;1allele=C/T;version=Hapmap2;RS=rs810855135;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	212127866	212127965	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:206612829;1allele=T/C;version=Hapmap2;RS=rs823912985;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	212220002	212220101	.	+	.	Name=Ear_row_number;B73v2_pos=3:206694431;1allele=A/G;version=Hapmap2;RS=rs277266651;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	212296631	212296730	.	+	.	Name=Height_above_ear;B73v2_pos=3:206768289;1allele=G/T;version=Hapmap2;RS=rs802604819;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	212416915	212417014	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:206850466;1allele=A/G;version=Hapmap2;RS=rs813274013;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	212432920	212433019	.	+	.	Name=Leaf_length;B73v2_pos=3:206866411;1allele=A/G;version=Hapmap2;RS=rs129497357;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	212478846	212478945	.	+	.	Name=Cob_diameter;B73v2_pos=3:206937151;1allele=T/C;version=Hapmap2;RS=rs820862136;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	212494493	212494592	.	+	.	Name=Cob_diameter;B73v2_pos=3:206943004;1allele=+/-;version=Hapmap2;RS=rs811023794;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	212706695	212706794	.	+	.	Name=Ear_row_number;B73v2_pos=3:207148729;1allele=C/T;version=Hapmap2;RS=rs132096242;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	212709276	212709375	.	+	.	Name=Ear_row_number;B73v2_pos=3:207151310;1allele=C/T;version=Hapmap2;RS=rs811900417;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	213081785	213081884	.	+	.	Name=Ear_row_number;B73v2_pos=3:207522029;1allele=T/G;version=Hapmap2;RS=rs837184064;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	213082609	213082708	.	+	.	Name=Ear_row_number;B73v2_pos=3:207522853;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	213308555	213308654	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:207739040;1allele=C/T;version=Hapmap2;RS=rs132096729;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	213609613	213609712	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:208034440;1allele=C/T;version=Hapmap2;RS=rs129360965;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	213610665	213610764	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208035482;1allele=A/G;version=Hapmap1;RS=rs132097108;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	213611289	213611388	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:208036106;1allele=T/C;version=Hapmap2;RS=rs849010818;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	213622417	213622516	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208047228;1allele=A/G;version=Hapmap2;RS=rs129455076;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	213631226	213631325	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208056030;1allele=C/T;version=Hapmap1;RS=rs129281581;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	213687420	213687519	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208113423;1allele=C/T;version=Hapmap2;RS=rs829406814;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	213708840	213708939	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:208134688;1allele=A/G;version=Hapmap2;RS=rs811125225;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	213739409	213739508	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208169687;1allele=C/T;version=Hapmap2;RS=rs821382070;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	213747320	213747419	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208161776;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	213845024	213845123	.	+	.	Name=Cob_diameter;B73v2_pos=3:208271845;1allele=C/G;version=Hapmap2;RS=rs804906084;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	213845390	213845489	.	+	.	Name=Cob_diameter;B73v2_pos=3:208272211;1allele=G/A;version=Hapmap2;RS=rs811266418;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	213902386	213902485	.	+	.	Name=Cob_diameter;B73v2_pos=3:208328409;1allele=G/A;version=Hapmap2;RS=rs821896090;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	213928730	213928829	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208354743;1allele=G/A;version=Hapmap2;RS=rs1061712539;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	213982454	213982553	.	+	.	Name=Protein;B73v2_pos=3:208408473;1allele=T/G;version=Hapmap2;RS=rs834817944;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	213987177	213987276	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208413196;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	213992539	213992638	.	+	.	Name=Height_above_ear;B73v2_pos=3:208418560;1allele=C/T;version=Hapmap2;RS=rs817751206;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214086824	214086923	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208513404;1allele=C/T;version=Hapmap2;RS=rs845328150;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214109495	214109594	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:208535104;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	214115393	214115492	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:208541002;1allele=A/C;version=Hapmap2;RS=rs815752060;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214358830	214358929	.	+	.	Name=Height_above_ear;B73v2_pos=3:208786816;1allele=A/T;version=Hapmap2;RS=rs840271379;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	214366769	214366868	.	+	.	Name=Tassel_length;B73v2_pos=3:208794755;1allele=A/G;version=Hapmap2;RS=rs277269548;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	214366814	214366913	.	+	.	Name=Tassel_length;B73v2_pos=3:208794800;1allele=A/G;version=Hapmap2;RS=rs277269552;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	214457703	214457802	.	+	.	Name=Tassel_length;B73v2_pos=3:208903085;1allele=G/C;version=Hapmap2;RS=rs824421429;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	214459046	214459145	.	+	.	Name=Tassel_length;B73v2_pos=3:208904428;1allele=T/C;version=Hapmap2;RS=rs277269783;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214460024	214460123	.	+	.	Name=Tassel_length;B73v2_pos=3:208905406;1allele=G/A;version=Hapmap2;RS=rs1061771083;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	214460059	214460158	.	+	.	Name=Tassel_length;B73v2_pos=3:208905441;1allele=T/A;version=Hapmap2;RS=rs810942509;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	214479387	214479486	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:208872707;1allele=G/C;version=Hapmap2;RS=rs129504896;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	214479574	214479673	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:208872894;1allele=T/A;version=Hapmap2;RS=rs132098075;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	214486811	214486910	.	+	.	Name=Days_to_silk;B73v2_pos=3:208880131;1allele=A/G;version=Hapmap2;RS=rs848636367;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	214522336	214522435	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:208936683;1allele=T/C;version=Hapmap1;RS=rs726775712;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214526017	214526116	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:208940364;1allele=C/A;version=Hapmap2;RS=rs814527858;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	214528471	214528570	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:208942818;1allele=T/C;version=Hapmap2;RS=rs804698461;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214544400	214544499	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:208959579;1allele=G/A;version=Hapmap2;RS=rs831921295;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	214554238	214554337	.	+	.	Name=Height_above_ear;B73v2_pos=3:208969420;1allele=C/G;version=Hapmap2;RS=rs839274455;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	214555581	214555680	.	+	.	Name=Ear_height;B73v2_pos=3:208970763;1allele=C/T;version=Hapmap2;RS=rs277270004;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214609313	214609412	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:209013447;1allele=G/A;version=Hapmap2;RS=rs277270051;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	214609313	214609412	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:209013447;1allele=G/A;version=Hapmap2;RS=rs277270051;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	214610543	214610642	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:209014677;1allele=G/A;version=Hapmap2;RS=rs277270060;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	214610715	214610814	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:209014849;1allele=T/C;version=Hapmap2;RS=rs277270066;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214610715	214610814	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209014849;1allele=T/C;version=Hapmap2;RS=rs277270066;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214613430	214613529	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209017564;1allele=A/T;version=Hapmap2;RS=rs829155280;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	214616819	214616918	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209020953;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	214618122	214618221	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:209022256;1allele=C/T;version=Hapmap2;RS=rs277270106;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214618208	214618307	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:209022342;1allele=/GAAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	214620194	214620293	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209024328;1allele=C/A;version=Hapmap1;RS=rs132098607;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214620288	214620387	.	+	.	Name=Cob_diameter;B73v2_pos=3:209024422;1allele=T/A;version=Hapmap2;RS=rs132098611;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	214620677	214620776	.	+	.	Name=Cob_diameter;B73v2_pos=3:209024811;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	214622458	214622557	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209026592;1allele=A/T;version=Hapmap2;RS=rs129386035;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	214625861	214625960	.	+	.	Name=Cob_diameter;B73v2_pos=3:209029995;1allele=T/C;version=Hapmap1;RS=rs132098674;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214625861	214625960	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209029995;1allele=T/C;version=Hapmap1;RS=rs132098674;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214651514	214651613	.	+	.	Name=Glutamate;B73v2_pos=3:209053450;1allele=G/A;version=Hapmap2;RS=rs844848871;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	214654877	214654976	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:209056813;1allele=C/A;version=Hapmap2;RS=rs804173951;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	214657397	214657496	.	+	.	Name=Cob_diameter;B73v2_pos=3:209059333;1allele=G/A;version=Hapmap2;RS=rs809877004;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	214657685	214657784	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209059621;1allele=C/T;version=Hapmap2;RS=rs822659566;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214657999	214658098	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:209059935;1allele=G/A;version=Hapmap2;RS=rs129302267;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	214672825	214672924	.	+	.	Name=Height_above_ear;B73v2_pos=3:209074759;1allele=A/T;version=Hapmap2;RS=rs843735845;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	214685940	214686039	.	+	.	Name=Cob_diameter;B73v2_pos=3:209087880;1allele=G/C;version=Hapmap2;RS=rs132098798;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	214690364	214690463	.	+	.	Name=Ear_height;B73v2_pos=3:209092294;1allele=T/G;version=Hapmap2;RS=rs802330156;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	214692314	214692413	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:209094244;1allele=C/T;version=Hapmap2;RS=rs803045618;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214692320	214692419	.	+	.	Name=Ear_row_number;B73v2_pos=3:209094250;1allele=T/C;version=Hapmap2;RS=rs277270308;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214702240	214702339	.	+	.	Name=Glutamate;B73v2_pos=3:209104168;1allele=-/+;version=Hapmap2;RS=rs841676163;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	214729288	214729387	.	+	.	Name=Ear_height;B73v2_pos=3:209131217;1allele=C/T;version=Hapmap2;RS=rs825779858;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	214729389	214729488	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:209131318;1allele=A/G;version=Hapmap2;RS=rs802428772;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	214737362	214737461	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209139291;1allele=T/C;version=Hapmap2;RS=rs129397937;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214829518	214829617	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209231136;1allele=A/T;version=Hapmap2;RS=rs826360308;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	214852734	214852833	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:209254153;1allele=C/T;version=Hapmap2;RS=rs838718762;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	214920367	214920466	.	+	.	Name=Ear_height;B73v2_pos=3:209321784;1allele=C/T;version=Hapmap2;RS=rs1063092615;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215052719	215052818	.	+	.	Name=Tassel_length;B73v2_pos=3:209457455;1allele=C/T;version=Hapmap2;RS=rs129462962;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215053776	215053875	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:209458518;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215084370	215084469	.	+	.	Name=Tassel_length;B73v2_pos=3:209489115;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215084397	215084496	.	+	.	Name=Tassel_length;B73v2_pos=3:209489142;1allele=A/C;version=Hapmap1;RS=rs129346228;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	215134878	215134977	.	+	.	Name=Days_to_silk;B73v2_pos=3:209540338;1allele=A/G;version=Hapmap2;RS=rs836686658;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215142166	215142265	.	+	.	Name=Days_to_silk;B73v2_pos=3:209547627;1allele=A/G;version=Hapmap2;RS=rs129413967;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215143395	215143494	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:209548856;1allele=C/T;version=Hapmap2;RS=rs277270830;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215147876	215147975	.	+	.	Name=Days_to_silk;B73v2_pos=3:209553337;1allele=A/G;version=Hapmap2;RS=rs129482920;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215151761	215151860	.	+	.	Name=Days_to_silk;B73v2_pos=3:209557223;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215169364	215169463	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209574827;1allele=T/G;version=Hapmap2;RS=rs825931110;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	215187401	215187500	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:209601142;1allele=C/T;version=Hapmap2;RS=rs831406427;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215187928	215188027	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:209601669;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215190342	215190441	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:209604083;1allele=G/T;version=Hapmap2;RS=rs1061762102;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	215193096	215193195	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:209606837;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215195157	215195256	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:209608899;1allele=T/C;version=Hapmap2;RS=rs725161070;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215219828	215219927	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209628116;1allele=A/C;version=Hapmap2;RS=rs844233080;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	215227209	215227308	.	+	.	Name=Days_to_silk;B73v2_pos=3:209640527;1allele=G/T;version=Hapmap2;RS=rs277270923;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	215227614	215227713	.	+	.	Name=Ear_height;B73v2_pos=3:209640932;1allele=A/C;version=Hapmap2;RS=rs129370672;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	215227623	215227722	.	+	.	Name=Ear_height;B73v2_pos=3:209640941;1allele=C/T;version=Hapmap2;RS=rs129268526;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215228356	215228455	.	+	.	Name=Height_above_ear;B73v2_pos=3:209641674;1allele=T/C;version=Hapmap2;RS=rs832677028;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215244994	215245093	.	+	.	Name=Height_above_ear;B73v2_pos=3:209658313;1allele=A/C;version=Hapmap2;RS=rs840791390;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	215246680	215246779	.	+	.	Name=Height_above_ear;B73v2_pos=3:209659999;1allele=A/C;version=Hapmap2;RS=rs807024789;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	215249020	215249119	.	+	.	Name=Ear_height;B73v2_pos=3:209662339;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215255338	215255437	.	+	.	Name=Height_above_ear;B73v2_pos=3:209668634;1allele=C/T;version=Hapmap2;RS=rs277271000;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215321084	215321183	.	+	.	Name=Ear_height;B73v2_pos=3:209733691;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215321235	215321334	.	+	.	Name=Ear_height;B73v2_pos=3:209733842;1allele=C/G;version=Hapmap2;RS=rs277271167;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	215325329	215325428	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:209737936;1allele=G/A;version=Hapmap2;RS=rs827425937;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	215325329	215325428	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:209737936;1allele=G/A;version=Hapmap2;RS=rs827425937;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	215326866	215326965	.	+	.	Name=Height_above_ear;B73v2_pos=3:209739473;1allele=A/G;version=Hapmap1;RS=rs132099282;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	215326914	215327013	.	+	.	Name=Height_above_ear;B73v2_pos=3:209739521;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215326981	215327080	.	+	.	Name=Height_above_ear;B73v2_pos=3:209739588;1allele=T/C;version=Hapmap2;RS=rs805682933;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215327948	215328047	.	+	.	Name=Height_above_ear;B73v2_pos=3:209740555;1allele=G/T;version=Hapmap2;RS=rs277271199;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	215327991	215328090	.	+	.	Name=Height_above_ear;B73v2_pos=3:209740598;1allele=T/C;version=Hapmap2;RS=rs1064522660;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215383854	215383953	.	+	.	Name=Height_above_ear;B73v2_pos=3:209795596;1allele=T/C;version=Hapmap2;RS=rs828946585;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215385125	215385224	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:209796867;1allele=C/A;version=Hapmap2;RS=rs803286644;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	215386152	215386251	.	+	.	Name=Height_above_ear;B73v2_pos=3:209797894;1allele=T/C;version=Hapmap2;RS=rs812924981;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215386642	215386741	.	+	.	Name=Height_above_ear;B73v2_pos=3:209798384;1allele=A/G;version=Hapmap2;RS=rs822293901;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215386642	215386741	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:209798384;1allele=A/G;version=Hapmap2;RS=rs822293901;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215388185	215388284	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209799927;1allele=A/G;version=Hapmap2;RS=rs129416588;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215388968	215389067	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209800710;1allele=T/C;version=Hapmap2;RS=rs129353064;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215389170	215389269	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209800912;1allele=A/G;version=Hapmap2;RS=rs129333692;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215391112	215391211	.	+	.	Name=Height_above_ear;B73v2_pos=3:209802854;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215391189	215391288	.	+	.	Name=Days_to_silk;B73v2_pos=3:209802931;1allele=C/T;version=Hapmap2;RS=rs277271252;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215392819	215392918	.	+	.	Name=Glutamate;B73v2_pos=3:209804561;1allele=C/T;version=Hapmap2;RS=rs129425508;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215392854	215392953	.	+	.	Name=Glutamate;B73v2_pos=3:209804596;1allele=A/T;version=Hapmap2;RS=rs277271273;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	215416360	215416459	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209828100;1allele=T/C;version=Hapmap2;RS=rs129314241;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	215420299	215420398	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:209832035;1allele=C/T;version=Hapmap2;RS=rs837166527;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215426688	215426787	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209838424;1allele=T/G;version=Hapmap2;RS=rs129543284;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	215433679	215433778	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:209845415;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215497232	215497330	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:209909391;1allele=G/A;version=Hapmap2;RS=rs836186958;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215501589	215501688	.	+	.	Name=Ear_height;B73v2_pos=3:209913749;1allele=T/G;version=Hapmap2;RS=rs277271559;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	215501597	215501696	.	+	.	Name=Ear_height;B73v2_pos=3:209913757;1allele=C/T;version=Hapmap2;RS=rs129611094;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215501685	215501784	.	+	.	Name=Ear_height;B73v2_pos=3:209913845;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215501692	215501791	.	+	.	Name=Ear_height;B73v2_pos=3:209913852;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215503028	215503127	.	+	.	Name=Ear_height;B73v2_pos=3:209915188;1allele=C/T;version=Hapmap2;RS=rs277271564;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	215505882	215505981	.	+	.	Name=Leaf_width;B73v2_pos=3:209918039;1allele=G/A;version=Hapmap2;RS=rs132099501;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215653527	215653626	.	+	.	Name=Days_to_silk;B73v2_pos=3:210065252;1allele=G/C;version=Hapmap2;RS=rs277271711;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	215700354	215700453	.	+	.	Name=Glutamate;B73v2_pos=3:210111860;1allele=A/C;version=Hapmap2;RS=rs814288779;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	215825318	215825417	.	+	.	Name=Glutamate;B73v2_pos=3:210234917;1allele=G/A;version=Hapmap2;RS=rs849144439;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	215852814	215852913	.	+	.	Name=Glutamate;B73v2_pos=3:210262092;1allele=A/G;version=Hapmap2;RS=rs838147151;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	215858157	215858256	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:210267435;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215864896	215864995	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210274174;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	215865331	215865430	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:210274609;1allele=G/A;version=Hapmap2;RS=rs825231739;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	215866283	215866382	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210275561;1allele=A/C;version=Hapmap2;RS=rs817434458;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	215866382	215866481	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210275660;1allele=G/T;version=Hapmap2;RS=rs129435961;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	215938364	215938463	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210348137;1allele=C/T;version=Hapmap2;RS=rs277272144;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216080451	216080550	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:210479982;1allele=A/G;version=Hapmap2;RS=rs849623020;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216110203	216110302	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:210523115;1allele=T/C;version=Hapmap2;RS=rs132100209;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	216123017	216123116	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210535929;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216145556	216145655	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210558378;1allele=G/T;version=Hapmap2;RS=rs129495750;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	216161510	216161609	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210574368;1allele=C/T;version=Hapmap2;RS=rs129507690;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	216161510	216161609	.	+	.	Name=Ear_height;B73v2_pos=3:210574368;1allele=C/T;version=Hapmap2;RS=rs129507690;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	216162261	216162360	.	+	.	Name=Ear_height;B73v2_pos=3:210575119;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216162261	216162360	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210575119;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216162738	216162837	.	+	.	Name=Days_to_silk;B73v2_pos=3:210575596;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216168056	216168155	.	+	.	Name=Height_above_ear;B73v2_pos=3:210580914;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216193895	216193994	.	+	.	Name=Ear_height;B73v2_pos=3:210606359;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216265689	216265788	.	+	.	Name=Leaf_width;B73v2_pos=3:210672479;1allele=/ACGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216265754	216265853	.	+	.	Name=Leaf_width;B73v2_pos=3:210672544;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216265825	216265924	.	+	.	Name=Leaf_width;B73v2_pos=3:210672615;1allele=C/T;version=Hapmap2;RS=rs129497403;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	216266265	216266364	.	+	.	Name=Leaf_width;B73v2_pos=3:210673055;1allele=G/A;version=Hapmap1;RS=rs132100508;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216306834	216306933	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:210715041;1allele=C/T;version=Hapmap2;RS=rs277272999;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216307128	216307227	.	+	.	Name=Leaf_width;B73v2_pos=3:210715335;1allele=C/T;version=Hapmap2;RS=rs129364868;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	216307876	216307975	.	+	.	Name=Ear_height;B73v2_pos=3:210716083;1allele=A/G;version=Hapmap2;RS=rs806649544;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216336019	216336118	.	+	.	Name=Days_to_silk;B73v2_pos=3:210744789;1allele=C/T;version=Hapmap2;RS=rs277273060;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216349051	216349150	.	+	.	Name=Glutamate;B73v2_pos=3:210757740;1allele=A/G;version=Hapmap2;RS=rs129505414;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	216349452	216349551	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:210758141;1allele=G/A;version=Hapmap2;RS=rs820795464;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216351600	216351699	.	+	.	Name=Glutamate;B73v2_pos=3:210760289;1allele=G/A;version=Hapmap2;RS=rs129608586;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	216352866	216352965	.	+	.	Name=Cob_diameter;B73v2_pos=3:210761555;1allele=A/C;version=Hapmap2;RS=rs845123624;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	216412370	216412469	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:210821064;1allele=T/A;version=Hapmap2;RS=rs840382417;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	216412726	216412825	.	+	.	Name=Ear_height;B73v2_pos=3:210821420;1allele=C/G;version=Hapmap2;RS=rs132100787;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	216428415	216428514	.	+	.	Name=Cob_diameter;B73v2_pos=3:210837110;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216438788	216438887	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:210847483;1allele=G/A;version=Hapmap2;RS=rs129321653;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216439795	216439894	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210848490;1allele=A/G;version=Hapmap2;RS=rs129500687;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216456712	216456811	.	+	.	Name=Cob_diameter;B73v2_pos=3:210865407;1allele=G/T;version=Hapmap2;RS=rs277273471;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	216457267	216457366	.	+	.	Name=Ear_height;B73v2_pos=3:210865962;1allele=C/A;version=Hapmap2;RS=rs277273487;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	216459704	216459803	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210868399;1allele=C/T;version=Hapmap2;RS=rs832709475;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216500729	216500828	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210909420;1allele=C/T;version=Hapmap2;RS=rs844057826;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	216503764	216503863	.	+	.	Name=Height_above_ear;B73v2_pos=3:210912456;1allele=G/A;version=Hapmap2;RS=rs837268861;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216505233	216505332	.	+	.	Name=Cob_diameter;B73v2_pos=3:210913925;1allele=C/T;version=Hapmap2;RS=rs277273602;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	216505233	216505332	.	+	.	Name=Height_above_ear;B73v2_pos=3:210913925;1allele=C/T;version=Hapmap2;RS=rs277273602;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	216506244	216506343	.	+	.	Name=Ear_height;B73v2_pos=3:210914936;1allele=A/G;version=Hapmap2;RS=rs129541727;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216506244	216506343	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210914936;1allele=A/G;version=Hapmap2;RS=rs129541727;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216508340	216508439	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210917032;1allele=A/G;version=Hapmap2;RS=rs831668165;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216508350	216508449	.	+	.	Name=Height_above_ear;B73v2_pos=3:210917042;1allele=T/C;version=Hapmap2;RS=rs809553120;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216569062	216569161	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210975690;1allele=A/G;version=Hapmap2;RS=rs129451283;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216570097	216570196	.	+	.	Name=Ear_row_number;B73v2_pos=3:210976725;1allele=T/C;version=Hapmap1;RS=rs132100968;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216572326	216572425	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210978954;1allele=G/A;version=Hapmap2;RS=rs829834735;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216574558	216574657	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210981186;1allele=C/G;version=Hapmap2;RS=rs277273727;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	216574945	216575044	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210981573;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216574945	216575044	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210981573;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216574963	216575062	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210981591;1allele=C/T;version=Hapmap2;RS=rs277273731;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216575831	216575930	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:210982459;1allele=C/T;version=Hapmap2;RS=rs129441569;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216575831	216575930	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210982459;1allele=C/T;version=Hapmap2;RS=rs129441569;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216576827	216576926	.	+	.	Name=Ear_height;B73v2_pos=3:210983555;1allele=/ATTTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216577186	216577285	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:210983914;1allele=C/A;version=Hapmap1;RS=rs132101088;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	216657995	216658094	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:211066080;1allele=T/A;version=Hapmap2;RS=rs835609581;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	216663468	216663567	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:211071559;1allele=T/C;version=Hapmap2;RS=rs129579452;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	216695522	216695621	.	+	.	Name=Plant_height;B73v2_pos=3:211103463;1allele=A/T;version=Hapmap2;RS=rs1061606012;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	216728174	216728273	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211136127;1allele=T/A;version=Hapmap2;RS=rs841771435;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	216738362	216738461	.	+	.	Name=Tassel_length;B73v2_pos=3:211146315;1allele=A/G;version=Hapmap2;RS=rs129564508;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	216778855	216778954	.	+	.	Name=Days_to_silk;B73v2_pos=3:211195398;1allele=G/C;version=Hapmap2;RS=rs129299162;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	216779196	216779295	.	+	.	Name=Days_to_silk;B73v2_pos=3:211195739;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	216798844	216798943	.	+	.	Name=Days_to_silk;B73v2_pos=3:211230083;1allele=A/T;version=Hapmap2;RS=rs1061695900;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	216892272	216892371	.	+	.	Name=Days_to_silk;B73v2_pos=3:211307850;1allele=G/A;version=Hapmap2;RS=rs1062794684;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	216916257	216916356	.	+	.	Name=Leaf_width;B73v2_pos=3:211331835;1allele=A/G;version=Hapmap2;RS=rs811948813;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217008165	217008264	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:211423265;1allele=T/G;version=Hapmap2;RS=rs816534777;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	217136489	217136588	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:211548552;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217136489	217136588	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:211548552;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217156436	217156535	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211514021;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217222187	217222286	.	+	.	Name=Days_to_silk;B73v2_pos=3:211601005;1allele=C/A;version=Hapmap2;RS=rs129537610;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	217222505	217222604	.	+	.	Name=Ear_height;B73v2_pos=3:211601323;1allele=T/G;version=Hapmap2;RS=rs129514464;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	217223673	217223772	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211602491;1allele=A/G;version=Hapmap1;RS=rs132101681;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217223763	217223862	.	+	.	Name=Plant_height;B73v2_pos=3:211602581;1allele=A/G;version=Hapmap2;RS=rs129472018;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217226514	217226613	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:211605334;1allele=C/T;version=Hapmap2;RS=rs277274241;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217226817	217226916	.	+	.	Name=Ear_height;B73v2_pos=3:211605637;1allele=G/A;version=Hapmap2;RS=rs129586687;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217227161	217227260	.	+	.	Name=Ear_height;B73v2_pos=3:211605981;1allele=C/T;version=Hapmap2;RS=rs847272427;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217229753	217229850	.	+	.	Name=Ear_height;B73v2_pos=3:211608575;1allele=C/A;version=Hapmap2;RS=rs277274262;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	217229812	217229910	.	+	.	Name=Ear_height;B73v2_pos=3:211608634;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217235512	217235611	.	+	.	Name=Ear_height;B73v2_pos=3:211614293;1allele=C/T;version=Hapmap2;RS=rs818263258;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217245074	217245173	.	+	.	Name=Ear_height;B73v2_pos=3:211623858;1allele=G/A;version=Hapmap2;RS=rs129266778;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217300442	217300541	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:211678336;1allele=C/T;version=Hapmap2;RS=rs277274306;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217301248	217301347	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:211679142;1allele=C/A;version=Hapmap2;RS=rs129607915;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	217301784	217301884	.	+	.	Name=Ear_height;B73v2_pos=3:211679677;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217303081	217303180	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211680973;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217304426	217304525	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211682314;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217305178	217305277	.	+	.	Name=Ear_height;B73v2_pos=3:211683066;1allele=A/G;version=Hapmap1;RS=rs129539426;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217339352	217339451	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:211714967;1allele=G/A;version=Hapmap2;RS=rs1060984265;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217342751	217342850	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:211718326;1allele=C/T;version=Hapmap2;RS=rs1061405936;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217344645	217344744	.	+	.	Name=Ear_height;B73v2_pos=3:211720220;1allele=C/T;version=Hapmap2;RS=rs277274368;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217345158	217345257	.	+	.	Name=Ear_height;B73v2_pos=3:211720733;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217345252	217345351	.	+	.	Name=Ear_height;B73v2_pos=3:211720827;1allele=A/G;version=Hapmap2;RS=rs55625338;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	217346968	217347067	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:211722543;1allele=C/A;version=Hapmap2;RS=rs129587771;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	217385135	217385234	.	+	.	Name=Ear_height;B73v2_pos=3:211758158;1allele=T/G;version=Hapmap2;RS=rs129307272;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	217392351	217392450	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:211765374;1allele=T/A;version=Hapmap2;RS=rs132102137;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	217425855	217425954	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:211798880;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217453099	217453198	.	+	.	Name=Glutamate;B73v2_pos=3:211825583;1allele=G/A;version=Hapmap2;RS=rs843719590;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	217453455	217453554	.	+	.	Name=Glutamate;B73v2_pos=3:211825939;1allele=T/G;version=Hapmap2;RS=rs822752520;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	217458760	217458859	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:211831243;1allele=C/T;version=Hapmap2;RS=rs805150981;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	217459607	217459706	.	+	.	Name=Leaf_width;B73v2_pos=3:211832090;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217471440	217471539	.	+	.	Name=Tassel_length;B73v2_pos=3:211843130;1allele=A/G;version=Hapmap2;RS=rs832956510;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	217580162	217580261	.	+	.	Name=Nitrate;B73v2_pos=3:211951343;1allele=A/G;version=Hapmap2;RS=rs847075363;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	217580227	217580326	.	+	.	Name=Nitrate;B73v2_pos=3:211951408;1allele=G/A;version=Hapmap2;RS=rs837010314;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217581765	217581864	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:211952946;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217592649	217592748	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:211966258;1allele=T/C;version=Hapmap2;RS=rs129291915;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	217596493	217596592	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211970102;1allele=T/C;version=Hapmap2;RS=rs836828764;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217598563	217598662	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:211972172;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217626496	217626595	.	+	.	Name=Plant_height;B73v2_pos=3:212000104;1allele=T/C;version=Hapmap2;RS=rs843189378;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217631879	217631978	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:212005487;1allele=C/T;version=Hapmap2;RS=rs277275280;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217638068	217638167	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:212011676;1allele=T/C;version=Hapmap2;RS=rs277275343;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	217641295	217641394	.	+	.	Name=Glutamate;B73v2_pos=3:212012999;1allele=G/C;version=Hapmap2;RS=rs277275361;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	217645943	217646042	.	+	.	Name=Ear_height;B73v2_pos=3:212017647;1allele=T/C;version=Hapmap2;RS=rs277275439;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	217650568	217650667	.	+	.	Name=Total_amino_acids;B73v2_pos=3:212022268;1allele=G/A;version=Hapmap2;RS=rs805340129;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	217650606	217650705	.	+	.	Name=Total_amino_acids;B73v2_pos=3:212022306;1allele=A/G;version=Hapmap2;RS=rs132102422;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217651133	217651232	.	+	.	Name=Total_amino_acids;B73v2_pos=3:212022833;1allele=A/G;version=Hapmap2;RS=rs869682961;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	217653479	217653578	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:212025026;1allele=G/T;version=Hapmap2;RS=rs277275486;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	217653844	217653943	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:212025391;1allele=C/T;version=Hapmap2;RS=rs277275496;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	217653886	217653985	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:212025433;1allele=A/T;version=Hapmap2;RS=rs129351494;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	217655296	217655395	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212026843;1allele=A/G;version=Hapmap1;RS=rs132102477;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217655296	217655395	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:212026843;1allele=A/G;version=Hapmap1;RS=rs132102477;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	217677661	217677760	.	+	.	Name=Glutamate;B73v2_pos=3:212048899;1allele=C/T;version=Hapmap2;RS=rs810701970;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	217845237	217845336	.	+	.	Name=Glutamate;B73v2_pos=3:212216616;1allele=A/C;version=Hapmap2;RS=rs277275744;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	217847646	217847745	.	+	.	Name=Glutamate;B73v2_pos=3:212219025;1allele=C/T;version=Hapmap2;RS=rs1060791523;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	217883026	217883125	.	+	.	Name=Leaf_width;B73v2_pos=3:212244315;1allele=G/A;version=Hapmap2;RS=rs822409402;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	217893182	217893281	.	+	.	Name=Glutamate;B73v2_pos=3:212254471;1allele=G/T;version=Hapmap2;RS=rs837603950;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	217906166	217906265	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212267457;1allele=A/T;version=Hapmap2;RS=rs132102735;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	217907764	217907863	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212269055;1allele=AGCG/;version=Hapmap1;RS=rs845836834;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	217907830	217907929	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212269121;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217908659	217908758	.	+	.	Name=Glutamate;B73v2_pos=3:212269950;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	217908659	217908758	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:212269950;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218008473	218008572	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:212380781;1allele=A/G;version=Hapmap2;RS=rs810610630;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	218035556	218035655	.	+	.	Name=Height_above_ear;B73v2_pos=3:212407869;1allele=G/C;version=Hapmap2;RS=rs725862099;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	218137052	218137151	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212499716;1allele=T/A;version=Hapmap2;RS=rs129413423;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	218138134	218138233	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:212500798;1allele=A/C;version=Hapmap2;RS=rs129348684;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	218164484	218164583	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:212542957;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218168234	218168333	.	+	.	Name=Tassel_length;B73v2_pos=3:212546707;1allele=ATC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218174412	218174511	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:212552885;1allele=A/C;version=Hapmap2;RS=rs277276248;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	218179057	218179156	.	+	.	Name=Days_to_silk;B73v2_pos=3:212557530;1allele=G/A;version=Hapmap2;RS=rs277276262;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	218179101	218179200	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:212557574;1allele=G/C;version=Hapmap2;RS=rs129297255;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	218181370	218181469	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:212559844;1allele=G/A;version=Hapmap2;RS=rs129596580;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	218211523	218211622	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:212590140;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218228859	218228958	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212606355;1allele=G/A;version=Hapmap2;RS=rs829976454;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	218296675	218296774	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:212671869;1allele=G/A;version=Hapmap2;RS=rs277276423;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	218313670	218313769	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:212688866;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218315754	218315853	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:212690949;1allele=T/G;version=Hapmap2;RS=rs277276454;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	218315754	218315853	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212690949;1allele=T/G;version=Hapmap2;RS=rs277276454;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	218316679	218316778	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:212691874;1allele=C/G;version=Hapmap1;RS=rs869560762;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	218328668	218328767	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:212703863;1allele=T/C;version=Hapmap1;RS=rs725474038;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	218331360	218331459	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212706555;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218331903	218332002	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:212707098;1allele=T/A;version=Hapmap1;RS=rs132103399;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	218332446	218332545	.	+	.	Name=Glutamate;B73v2_pos=3:212707641;1allele=G/A;version=Hapmap1;RS=rs132103412;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	218334617	218334716	.	+	.	Name=Ear_height;B73v2_pos=3:212709812;1allele=C/T;version=Hapmap2;RS=rs828148300;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	218335631	218335730	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:212710824;1allele=C/A;version=Hapmap2;RS=rs1063749860;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	218386242	218386341	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:212762078;1allele=A/G;version=Hapmap2;RS=rs815153563;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	218454595	218454694	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:212830475;1allele=G/A;version=Hapmap1;RS=rs132103573;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	218455382	218455481	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:212831262;1allele=C/G;version=Hapmap2;RS=rs1063648170;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	218459415	218459514	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:212835295;1allele=T/C;version=Hapmap2;RS=rs836194540;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	218571374	218571473	.	+	.	Name=Tassel_length;B73v2_pos=3:212944064;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218645354	218645453	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:213018074;1allele=C/T;version=Hapmap2;RS=rs1061998311;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	218773141	218773240	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:213185118;1allele=A/T;version=Hapmap2;RS=rs814041161;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	218860126	218860225	.	+	.	Name=Total_amino_acids;B73v2_pos=3:213275897;1allele=C/A;version=Hapmap2;RS=rs129280670;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	218896848	218896947	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:213312629;1allele=A/G;version=Hapmap1;RS=rs132103728;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	218911939	218912038	.	+	.	Name=Nitrate;B73v2_pos=3:213327723;1allele=G/A;version=Hapmap2;RS=rs727282188;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	218912751	218912850	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:213328535;1allele=G/A;version=Hapmap2;RS=rs277276967;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	218912751	218912850	.	+	.	Name=Glutamate;B73v2_pos=3:213328535;1allele=G/A;version=Hapmap2;RS=rs277276967;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	218914098	218914197	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:213329882;1allele=A/G;version=Hapmap2;RS=rs1062720429;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	218924099	218924198	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:213339883;1allele=A/G;version=Hapmap2;RS=rs277277026;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	218993288	218993387	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:213410356;1allele=C/T;version=Hapmap2;RS=rs277277107;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	218994293	218994392	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:213411361;1allele=G/A;version=Hapmap2;RS=rs846241071;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	218994880	218994979	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:213411948;1allele=/TGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	218997022	218997121	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:213414090;1allele=G/A;version=Hapmap2;RS=rs129520805;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	218998172	218998271	.	+	.	Name=Nitrate;B73v2_pos=3:213415240;1allele=C/T;version=Hapmap2;RS=rs129540078;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219005726	219005825	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213422794;1allele=C/T;version=Hapmap2;RS=rs727355131;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219029556	219029655	.	+	.	Name=Days_to_silk;B73v2_pos=3:213442370;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219050043	219050142	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213462273;1allele=T/C;version=Hapmap2;RS=rs277277213;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219065625	219065724	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:213476566;1allele=T/C;version=Hapmap2;RS=rs277277313;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219066915	219067014	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:213477856;1allele=T/A;version=Hapmap2;RS=rs277277318;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	219099665	219099764	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213510606;1allele=T/C;version=Hapmap2;RS=rs277277354;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219114613	219114712	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213525798;1allele=G/C;version=Hapmap2;RS=rs277277421;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	219114613	219114712	.	+	.	Name=Days_to_silk;B73v2_pos=3:213525798;1allele=G/C;version=Hapmap2;RS=rs277277421;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	219127072	219127171	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213538258;1allele=A/C;version=Hapmap2;RS=rs277277454;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	219127325	219127424	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213538511;1allele=G/A;version=Hapmap2;RS=rs277277458;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219137576	219137675	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213548762;1allele=C/G;version=Hapmap2;RS=rs277277492;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	219148029	219148128	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213559215;1allele=G/T;version=Hapmap2;RS=rs132104034;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	219149238	219149337	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213560424;1allele=C/T;version=Hapmap2;RS=rs1064120568;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219149650	219149749	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213560836;1allele=C/T;version=Hapmap2;RS=rs1061916971;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219151024	219151123	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213562210;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219182085	219182184	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213593190;1allele=G/T;version=Hapmap2;RS=rs725747929;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	219187130	219187229	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213598233;1allele=C/T;version=Hapmap2;RS=rs277277523;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219188808	219188907	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213599911;1allele=G/T;version=Hapmap2;RS=rs132104227;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	219195042	219195141	.	+	.	Name=Plant_height;B73v2_pos=3:213606145;1allele=A/T;version=Hapmap2;RS=rs132104255;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	219195139	219195229	.	+	.	Name=Days_to_silk;B73v2_pos=3:213606226;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219198794	219198893	.	+	.	Name=Leaf_length;B73v2_pos=3:213609890;1allele=T/C;version=Hapmap2;RS=rs277277556;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219199101	219199200	.	+	.	Name=Glutamate;B73v2_pos=3:213610197;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219209364	219209463	.	+	.	Name=Days_to_silk;B73v2_pos=3:213621540;1allele=G/A;version=Hapmap2;RS=rs1060882536;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219209364	219209463	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:213621540;1allele=G/A;version=Hapmap2;RS=rs1060882536;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219210085	219210184	.	+	.	Name=Days_to_silk;B73v2_pos=3:213622261;1allele=T/C;version=Hapmap2;RS=rs132104366;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219210257	219210356	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:213622433;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219210494	219210593	.	+	.	Name=Leaf_length;B73v2_pos=3:213622670;1allele=T/C;version=Hapmap1;RS=rs129418679;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219216642	219216741	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213628818;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219216694	219216793	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213628870;1allele=C/T;version=Hapmap2;RS=rs1063881738;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219243679	219243778	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213653566;1allele=C/T;version=Hapmap2;RS=rs848506837;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219363442	219363541	.	+	.	Name=Total_amino_acids;B73v2_pos=3:213774764;1allele=C/T;version=Hapmap1;RS=rs824388858;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219366423	219366522	.	+	.	Name=Nitrate;B73v2_pos=3:213777737;1allele=A/G;version=Hapmap1;RS=rs129299476;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219376517	219376616	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213787833;1allele=G/A;version=Hapmap2;RS=rs129547858;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219377249	219377348	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:213788565;1allele=C/G;version=Hapmap1;RS=rs132104589;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219378607	219378706	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:213789923;1allele=T/G;version=Hapmap1;RS=rs132104620;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	219378697	219378796	.	+	.	Name=Total_amino_acids;B73v2_pos=3:213790013;1allele=G/C;version=Hapmap1;RS=rs132104625;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	219378912	219379011	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:213790228;1allele=C/G;version=Hapmap1;RS=rs132104635;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	219379175	219379274	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:213790491;1allele=G/A;version=Hapmap2;RS=rs847736778;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219379186	219379285	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213790502;1allele=G/C;version=Hapmap2;RS=rs132104638;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219381141	219381240	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:213792457;1allele=C/T;version=Hapmap2;RS=rs129575422;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219382407	219382506	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:213793723;1allele=T/C;version=Hapmap2;RS=rs811889860;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219386162	219386261	.	+	.	Name=Leaf_length;B73v2_pos=3:213797478;1allele=C/G;version=Hapmap2;RS=rs844504664;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	219387565	219387664	.	+	.	Name=Nitrate;B73v2_pos=3:213798881;1allele=G/A;version=Hapmap2;RS=rs1064705416;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219387565	219387664	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:213798881;1allele=G/A;version=Hapmap2;RS=rs1064705416;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219390150	219390249	.	+	.	Name=Leaf_length;B73v2_pos=3:213801466;1allele=G/C;version=Hapmap2;RS=rs129395986;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	219390167	219390266	.	+	.	Name=Leaf_length;B73v2_pos=3:213801483;1allele=A/T;version=Hapmap2;RS=rs132104765;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	219392784	219392883	.	+	.	Name=Nitrate;B73v2_pos=3:213804100;1allele=T/C;version=Hapmap2;RS=rs129327407;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219430070	219430169	.	+	.	Name=Nitrate;B73v2_pos=3:213841385;1allele=C/A;version=Hapmap2;RS=rs277277828;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	219430179	219430278	.	+	.	Name=Nitrate;B73v2_pos=3:213841494;1allele=G/A;version=Hapmap2;RS=rs838563250;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219440769	219440868	.	+	.	Name=Total_amino_acids;B73v2_pos=3:213852955;1allele=A/G;version=Hapmap2;RS=rs1062360113;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219440970	219441069	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213853156;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219441290	219441389	.	+	.	Name=Total_amino_acids;B73v2_pos=3:213853476;1allele=T/C;version=Hapmap2;RS=rs1063829270;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219455922	219456021	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:213867950;1allele=C/A;version=Hapmap2;RS=rs817484119;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	219455939	219456038	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:213867967;1allele=G/A;version=Hapmap2;RS=rs848367817;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219488738	219488837	.	+	.	Name=Glutamate;B73v2_pos=3:213900531;1allele=G/A;version=Hapmap2;RS=rs808107886;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219490287	219490386	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:213902080;1allele=G/A;version=Hapmap2;RS=rs277277864;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219490795	219490894	.	+	.	Name=Total_amino_acids;B73v2_pos=3:213902588;1allele=T/A;version=Hapmap2;RS=rs277277870;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	219492670	219492769	.	+	.	Name=Nitrate;B73v2_pos=3:213904465;1allele=C/T;version=Hapmap2;RS=rs832616742;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219492719	219492818	.	+	.	Name=Nitrate;B73v2_pos=3:213904514;1allele=G/A;version=Hapmap2;RS=rs132104882;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219494933	219495032	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:213906728;1allele=C/T;version=Hapmap2;RS=rs277277905;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219494938	219495037	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:213906733;1allele=A/G;version=Hapmap2;RS=rs277277906;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219495050	219495149	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:213906845;1allele=G/A;version=Hapmap2;RS=rs277277908;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219495142	219495241	.	+	.	Name=Leaf_length;B73v2_pos=3:213906937;1allele=G/A;version=Hapmap2;RS=rs277277912;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219497297	219497396	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:213909092;1allele=G/A;version=Hapmap2;RS=rs277277931;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219497297	219497396	.	+	.	Name=Nitrate;B73v2_pos=3:213909092;1allele=G/A;version=Hapmap2;RS=rs277277931;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219499112	219499211	.	+	.	Name=Nitrate;B73v2_pos=3:213910907;1allele=C/A;version=Hapmap2;RS=rs277277944;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	219499951	219500050	.	+	.	Name=Nitrate;B73v2_pos=3:213911746;1allele=C/T;version=Hapmap2;RS=rs129460206;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219513946	219514045	.	+	.	Name=Nitrate;B73v2_pos=3:213925342;1allele=G/A;version=Hapmap2;RS=rs129491657;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219518303	219518402	.	+	.	Name=Nitrate;B73v2_pos=3:213929699;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219522196	219522295	.	+	.	Name=Nitrate;B73v2_pos=3:213933592;1allele=G/T;version=Hapmap2;RS=rs129470442;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	219527240	219527339	.	+	.	Name=Leaf_length;B73v2_pos=3:213938637;1allele=C/T;version=Hapmap2;RS=rs277278090;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219532876	219532975	.	+	.	Name=Leaf_width;B73v2_pos=3:213944273;1allele=C/G;version=Hapmap2;RS=rs812700529;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	219543072	219543171	.	+	.	Name=Tassel_length;B73v2_pos=3:213954469;1allele=T/C;version=Hapmap1;RS=rs129318800;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219564388	219564487	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:213975786;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219574365	219574464	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:213985766;1allele=C/T;version=Hapmap2;RS=rs129273074;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219588529	219588628	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:213999932;1allele=C/T;version=Hapmap2;RS=rs803984733;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219641571	219641670	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214052698;1allele=C/T;version=Hapmap2;RS=rs129300016;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219669665	219669764	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:214080867;1allele=A/G;version=Hapmap2;RS=rs129514106;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219718576	219718675	.	+	.	Name=Glutamate;B73v2_pos=3:214129355;1allele=A/G;version=Hapmap2;RS=rs129474112;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219805188	219805287	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:214216049;1allele=A/C;version=Hapmap2;RS=rs803531844;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	219805188	219805287	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:214216049;1allele=A/C;version=Hapmap2;RS=rs803531844;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	219805985	219806084	.	+	.	Name=Leaf_length;B73v2_pos=3:214216846;1allele=C/T;version=Hapmap2;RS=rs844519625;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219916798	219916897	.	+	.	Name=Glutamate;B73v2_pos=3:214233091;1allele=A/C;version=Hapmap2;RS=rs129415320;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	219917233	219917332	.	+	.	Name=Glutamate;B73v2_pos=3:214233526;1allele=G/A;version=Hapmap2;RS=rs277278833;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219917710	219917809	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214234003;1allele=A/C;version=Hapmap2;RS=rs129346752;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	219917710	219917809	.	+	.	Name=Malate;B73v2_pos=3:214234003;1allele=A/C;version=Hapmap2;RS=rs129346752;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	219917746	219917845	.	+	.	Name=Malate;B73v2_pos=3:214234039;1allele=A/G;version=Hapmap2;RS=rs277278847;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219917746	219917845	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214234039;1allele=A/G;version=Hapmap2;RS=rs277278847;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219919703	219919802	.	+	.	Name=Glutamate;B73v2_pos=3:214235996;1allele=C/T;version=Hapmap2;RS=rs277278896;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219920495	219920594	.	+	.	Name=Glutamate;B73v2_pos=3:214236788;1allele=A/G;version=Hapmap2;RS=rs1063239151;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219920495	219920594	.	+	.	Name=Malate;B73v2_pos=3:214236788;1allele=A/G;version=Hapmap2;RS=rs1063239151;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219920497	219920596	.	+	.	Name=Glutamate;B73v2_pos=3:214236790;1allele=T/A;version=Hapmap2;RS=rs277278910;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	219921488	219921587	.	+	.	Name=Glutamate;B73v2_pos=3:214237781;1allele=T/G;version=Hapmap2;RS=rs1061295396;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	219946627	219946726	.	+	.	Name=Leaf_length;B73v2_pos=3:214263369;1allele=A/G;version=Hapmap2;RS=rs1060845249;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219950048	219950147	.	+	.	Name=Glutamate;B73v2_pos=3:214266790;1allele=G/A;version=Hapmap2;RS=rs277278950;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219950170	219950269	.	+	.	Name=Malate;B73v2_pos=3:214266912;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219952126	219952225	.	+	.	Name=Glutamate;B73v2_pos=3:214268868;1allele=C/A;version=Hapmap2;RS=rs277278995;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	219955076	219955175	.	+	.	Name=Total_amino_acids;B73v2_pos=3:214271818;1allele=G/A;version=Hapmap2;RS=rs277279044;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219956593	219956692	.	+	.	Name=Leaf_length;B73v2_pos=3:214273335;1allele=A/T;version=Hapmap2;RS=rs839168027;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219991967	219992066	.	+	.	Name=Days_to_silk;B73v2_pos=3:214309690;1allele=C/T;version=Hapmap1;RS=rs724396198;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219993068	219993167	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:214310791;1allele=C/T;version=Hapmap2;RS=rs1060960156;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	219993521	219993620	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:214311244;1allele=G/T;version=Hapmap2;RS=rs129484110;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	219993955	219994054	.	+	.	Name=Days_to_silk;B73v2_pos=3:214311678;1allele=T/G;version=Hapmap2;RS=rs1062677374;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	219994856	219994955	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:214312579;1allele=T/C;version=Hapmap2;RS=rs129289761;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	219994981	219995080	.	+	.	Name=Days_to_silk;B73v2_pos=3:214312704;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	219995356	219995455	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214313079;1allele=G/A;version=Hapmap2;RS=rs1060780752;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219995356	219995455	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:214313079;1allele=G/A;version=Hapmap2;RS=rs1060780752;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	219995602	219995701	.	+	.	Name=Leaf_length;B73v2_pos=3:214313325;1allele=A/G;version=Hapmap2;RS=rs277279166;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219995652	219995751	.	+	.	Name=Days_to_silk;B73v2_pos=3:214313375;1allele=A/G;version=Hapmap2;RS=rs277279167;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219995944	219996043	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:214313667;1allele=A/G;version=Hapmap2;RS=rs1061684733;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219995944	219996043	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214313667;1allele=A/G;version=Hapmap2;RS=rs1061684733;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219995944	219996043	.	+	.	Name=Days_to_silk;B73v2_pos=3:214313667;1allele=A/G;version=Hapmap2;RS=rs1061684733;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	219996047	219996146	.	+	.	Name=Days_to_silk;B73v2_pos=3:214313770;1allele=G/C;version=Hapmap2;RS=rs828823509;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	219996229	219996328	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214313952;1allele=C/A;version=Hapmap2;RS=rs277279186;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	219998056	219998155	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:214315779;1allele=C/A;version=Hapmap2;RS=rs1064656036;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	219998833	219998932	.	+	.	Name=Days_to_silk;B73v2_pos=3:214316556;1allele=A/G;version=Hapmap2;RS=rs277279229;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220027905	220028004	.	+	.	Name=Leaf_length;B73v2_pos=3:214345629;1allele=G/A;version=Hapmap2;RS=rs841025619;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220027905	220028004	.	+	.	Name=Protein;B73v2_pos=3:214345629;1allele=G/A;version=Hapmap2;RS=rs841025619;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220053368	220053467	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:214369559;1allele=T/C;version=Hapmap2;RS=rs727424489;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220054221	220054320	.	+	.	Name=Cob_diameter;B73v2_pos=3:214370412;1allele=+/-;version=Hapmap2;RS=rs846447425;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220056202	220056301	.	+	.	Name=Leaf_length;B73v2_pos=3:214372393;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220056618	220056717	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:214372809;1allele=C/A;version=Hapmap2;RS=rs129268884;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	220102726	220102825	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:214414410;1allele=G/T;version=Hapmap2;RS=rs808606102;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	220106477	220106576	.	+	.	Name=Glutamate;B73v2_pos=3:214418161;1allele=C/T;version=Hapmap2;RS=rs810813503;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220139385	220139484	.	+	.	Name=Protein;B73v2_pos=3:214466285;1allele=G/A;version=Hapmap2;RS=rs845633526;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220140083	220140182	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:214466983;1allele=T/A;version=Hapmap2;RS=rs1061443976;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220140083	220140182	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:214466983;1allele=T/A;version=Hapmap2;RS=rs1061443976;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220140798	220140897	.	+	.	Name=Leaf_width;B73v2_pos=3:214467698;1allele=G/A;version=Hapmap2;RS=rs817214666;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220141145	220141244	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214468045;1allele=T/C;version=Hapmap2;RS=rs277279346;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220146086	220146185	.	+	.	Name=Leaf_length;B73v2_pos=3:214472401;1allele=G/A;version=Hapmap2;RS=rs129345339;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220146926	220147025	.	+	.	Name=Days_to_silk;B73v2_pos=3:214473241;1allele=A/G;version=Hapmap2;RS=rs826056628;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220148846	220148945	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:214475161;1allele=G/A;version=Hapmap2;RS=rs132105366;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220149547	220149646	.	+	.	Name=Leaf_length;B73v2_pos=3:214475862;1allele=C/T;version=Hapmap2;RS=rs129493605;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220149644	220149743	.	+	.	Name=Glutamate;B73v2_pos=3:214475959;1allele=G/A;version=Hapmap2;RS=rs129513450;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220149987	220150086	.	+	.	Name=Leaf_length;B73v2_pos=3:214476302;1allele=C/T;version=Hapmap2;RS=rs129434768;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220150761	220150860	.	+	.	Name=Protein;B73v2_pos=3:214477075;1allele=C/G;version=Hapmap2;RS=rs820745374;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220157279	220157378	.	+	.	Name=Glutamate;B73v2_pos=3:214483593;1allele=T/A;version=Hapmap2;RS=rs801995605;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	220159570	220159669	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:214485884;1allele=A/G;version=Hapmap2;RS=rs129562908;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220159931	220160030	.	+	.	Name=Protein;B73v2_pos=3:214486245;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220159931	220160030	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214486245;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220160119	220160218	.	+	.	Name=Nitrate;B73v2_pos=3:214486433;1allele=G/T;version=Hapmap2;RS=rs129598456;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	220160449	220160548	.	+	.	Name=Leaf_length;B73v2_pos=3:214486763;1allele=C/T;version=Hapmap2;RS=rs129573404;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220160811	220160910	.	+	.	Name=Nitrate;B73v2_pos=3:214487125;1allele=T/A;version=Hapmap2;RS=rs1063075330;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220160811	220160910	.	+	.	Name=Protein;B73v2_pos=3:214487125;1allele=T/A;version=Hapmap2;RS=rs1063075330;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220161036	220161135	.	+	.	Name=Leaf_length;B73v2_pos=3:214487350;1allele=A/T;version=Hapmap2;RS=rs1061368470;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	220169282	220169381	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:214557257;1allele=G/A;version=Hapmap2;RS=rs813078347;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220169290	220169389	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:214557265;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220169766	220169865	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214557741;1allele=G/A;version=Hapmap2;RS=rs836589761;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220169773	220169872	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214557748;1allele=T/C;version=Hapmap2;RS=rs843240153;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220169773	220169872	.	+	.	Name=Malate;B73v2_pos=3:214557748;1allele=T/C;version=Hapmap2;RS=rs843240153;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220171648	220171747	.	+	.	Name=Leaf_length;B73v2_pos=3:214559623;1allele=A/T;version=Hapmap2;RS=rs129505744;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	220175454	220175553	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:69954741;1allele=T/C;version=Hapmap2;RS=rs818393147;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220176275	220176374	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:69955562;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220203944	220204043	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214645635;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220203987	220204086	.	+	.	Name=Glutamate;B73v2_pos=3:214645678;1allele=C/G;version=Hapmap2;RS=rs132105479;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220204275	220204374	.	+	.	Name=Leaf_length;B73v2_pos=3:214645966;1allele=G/C;version=Hapmap2;RS=rs129424018;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	220216119	220216218	.	+	.	Name=Glutamate;B73v2_pos=3:214657810;1allele=G/A;version=Hapmap2;RS=rs129332823;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220225383	220225482	.	+	.	Name=Days_to_silk;B73v2_pos=3:214667074;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220227754	220227853	.	+	.	Name=Total_amino_acids;B73v2_pos=3:214669586;1allele=A/C;version=Hapmap2;RS=rs841701931;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	220255324	220255423	.	+	.	Name=Leaf_length;B73v2_pos=3:214707484;1allele=T/C;version=Hapmap2;RS=rs129329680;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220255361	220255460	.	+	.	Name=Leaf_length;B73v2_pos=3:214707521;1allele=A/G;version=Hapmap2;RS=rs129613355;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220261300	220261399	.	+	.	Name=Glutamate;B73v2_pos=3:214713462;1allele=T/C;version=Hapmap1;RS=rs129440990;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220261300	220261399	.	+	.	Name=Nitrate;B73v2_pos=3:214713462;1allele=T/C;version=Hapmap1;RS=rs129440990;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220261714	220261813	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214713876;1allele=C/G;version=Hapmap1;RS=rs129474999;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	220261839	220261938	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214714001;1allele=C/G;version=Hapmap2;RS=rs277279601;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220264023	220264122	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214716185;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220276309	220276408	.	+	.	Name=Glutamate;B73v2_pos=3:214728603;1allele=G/A;version=Hapmap2;RS=rs1062200499;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220276309	220276408	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214728603;1allele=G/A;version=Hapmap2;RS=rs1062200499;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220286933	220287032	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214739227;1allele=T/C;version=Hapmap1;RS=rs132105566;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220287795	220287894	.	+	.	Name=Leaf_length;B73v2_pos=3:214740089;1allele=C/T;version=Hapmap2;RS=rs813471924;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220294104	220294203	.	+	.	Name=Glutamate;B73v2_pos=3:214746399;1allele=C/T;version=Hapmap2;RS=rs129408434;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220294147	220294246	.	+	.	Name=Glutamate;B73v2_pos=3:214746442;1allele=C/G;version=Hapmap2;RS=rs277279697;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220294268	220294367	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:214746563;1allele=G/A;version=Hapmap2;RS=rs801776704;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220294375	220294474	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214746670;1allele=C/T;version=Hapmap2;RS=rs277279700;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220294981	220295080	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214747276;1allele=A/G;version=Hapmap2;RS=rs277279705;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220294981	220295080	.	+	.	Name=Glutamate;B73v2_pos=3:214747276;1allele=A/G;version=Hapmap2;RS=rs277279705;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220295455	220295554	.	+	.	Name=Days_to_silk;B73v2_pos=3:214747750;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220295512	220295611	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:214747807;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220295678	220295777	.	+	.	Name=Nitrate;B73v2_pos=3:214747973;1allele=T/A;version=Hapmap2;RS=rs277279715;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220295678	220295777	.	+	.	Name=Glutamate;B73v2_pos=3:214747973;1allele=T/A;version=Hapmap2;RS=rs277279715;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220295678	220295777	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214747973;1allele=T/A;version=Hapmap2;RS=rs277279715;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220301206	220301305	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214753501;1allele=A/C;version=Hapmap2;RS=rs129597738;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	220304803	220304902	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:214757098;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220306468	220306567	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:214758763;1allele=TA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220306704	220306803	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214758999;1allele=T/C;version=Hapmap2;RS=rs833445706;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	220306886	220306985	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214759181;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220324515	220324614	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214787700;1allele=G/A;version=Hapmap2;RS=rs277279859;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220330353	220330452	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214793538;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220330487	220330586	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:214793672;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220331963	220332062	.	+	.	Name=Total_amino_acids;B73v2_pos=3:214795148;1allele=G/A;version=Hapmap1;RS=rs129342440;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220332584	220332683	.	+	.	Name=Protein;B73v2_pos=3:214795769;1allele=T/G;version=Hapmap1;RS=rs132105712;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	220353523	220353622	.	+	.	Name=Protein;B73v2_pos=3:214816708;1allele=C/G;version=Hapmap2;RS=rs815782132;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220356571	220356670	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:214820654;1allele=A/T;version=Hapmap2;RS=rs129571614;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	220358195	220358294	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:214822278;1allele=T/A;version=Hapmap1;RS=rs129571987;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	220358195	220358294	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:214822278;1allele=T/A;version=Hapmap1;RS=rs129571987;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	220358616	220358715	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:214822699;1allele=G/A;version=Hapmap2;RS=rs132105768;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220358939	220359038	.	+	.	Name=Glutamate;B73v2_pos=3:214823022;1allele=G/A;version=Hapmap2;RS=rs129294180;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220360141	220360240	.	+	.	Name=Days_to_silk;B73v2_pos=3:214824224;1allele=C/T;version=Hapmap2;RS=rs129449402;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220361420	220361519	.	+	.	Name=Protein;B73v2_pos=3:214825503;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220368829	220368928	.	+	.	Name=Leaf_length;B73v2_pos=3:214832912;1allele=G/T;version=Hapmap2;RS=rs277279943;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	220369667	220369766	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214833750;1allele=A/C;version=Hapmap1;RS=rs132105842;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	220369851	220369950	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:214833934;1allele=C/G;version=Hapmap2;RS=rs129435122;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	220372630	220372729	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:214836713;1allele=G/A;version=Hapmap2;RS=rs818725554;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220372993	220373092	.	+	.	Name=Leaf_length;B73v2_pos=3:214837076;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220384623	220384722	.	+	.	Name=Total_amino_acids;B73v2_pos=3:214848708;1allele=C/T;version=Hapmap2;RS=rs837278734;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220392148	220392247	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:214856233;1allele=G/A;version=Hapmap2;RS=rs825346119;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220397519	220397618	.	+	.	Name=Glucose;B73v2_pos=3:214861604;1allele=G/A;version=Hapmap2;RS=rs132106007;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220404003	220404102	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:214885562;1allele=C/T;version=Hapmap2;RS=rs818185778;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220438680	220438779	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:214902774;1allele=C/T;version=Hapmap2;RS=rs129340559;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220463015	220463114	.	+	.	Name=Glutamate;B73v2_pos=3:214927351;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220572226	220572325	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215037002;1allele=C/G;version=Hapmap2;RS=rs849319342;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220582140	220582239	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:215046916;1allele=A/G;version=Hapmap2;RS=rs132106250;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220582140	220582239	.	+	.	Name=Days_to_silk;B73v2_pos=3:215046916;1allele=G/A;version=Hapmap1;RS=rs132106250;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220584272	220584371	.	+	.	Name=Protein;B73v2_pos=3:215049048;1allele=C/T;version=Hapmap2;RS=rs830889465;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220590247	220590346	.	+	.	Name=Leaf_length;B73v2_pos=3:215055023;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220611371	220611470	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:215076560;1allele=G/A;version=Hapmap2;RS=rs726434939;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220617387	220617486	.	+	.	Name=Protein;B73v2_pos=3:215082576;1allele=C/T;version=Hapmap2;RS=rs129557571;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220623209	220623308	.	+	.	Name=Glucose;B73v2_pos=3:215088398;1allele=G/A;version=Hapmap1;RS=rs132106286;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220738319	220738418	.	+	.	Name=Cob_diameter;B73v2_pos=3:215207938;1allele=T/A;version=Hapmap2;RS=rs841056165;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	220740383	220740482	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215210002;1allele=A/C;version=Hapmap2;RS=rs812221302;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	220740545	220740644	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215210164;1allele=A/G;version=Hapmap2;RS=rs132106399;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220762158	220762257	.	+	.	Name=Leaf_length;B73v2_pos=3:215231778;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220866567	220866666	.	+	.	Name=Leaf_length;B73v2_pos=3:215335466;1allele=C/T;version=Hapmap2;RS=rs1062728981;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220869066	220869165	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:215337968;1allele=A/G;version=Hapmap1;RS=rs132106450;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220944348	220944447	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215425757;1allele=/AA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220945113	220945212	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215426522;1allele=C/T;version=Hapmap2;RS=rs840479209;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220945138	220945237	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215426547;1allele=A/C;version=Hapmap2;RS=rs850178144;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	220945442	220945541	.	+	.	Name=Malate;B73v2_pos=3:215426851;1allele=A/G;version=Hapmap2;RS=rs129416262;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220945442	220945541	.	+	.	Name=Glutamate;B73v2_pos=3:215426851;1allele=G/A;version=Hapmap1;RS=rs129416262;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220946211	220946310	.	+	.	Name=Height_above_ear;B73v2_pos=3:215427620;1allele=A/G;version=Hapmap2;RS=rs132106569;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220946338	220946437	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215427747;1allele=TC/;version=Hapmap1;RS=rs826828860;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	220950547	220950646	.	+	.	Name=Days_to_silk;B73v2_pos=3:215431956;1allele=T/C;version=Hapmap2;RS=rs129534236;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220969511	220969610	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215448319;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220971053	220971152	.	+	.	Name=Malate;B73v2_pos=3:215449861;1allele=G/A;version=Hapmap2;RS=rs727132288;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	220986700	220986799	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215465823;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	220986743	220986842	.	+	.	Name=Protein;B73v2_pos=3:215465866;1allele=C/T;version=Hapmap2;RS=rs832195636;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	220993071	220993170	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:215472129;1allele=G/C;version=Hapmap2;RS=rs132106824;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220993071	220993170	.	+	.	Name=Protein;B73v2_pos=3:215472129;1allele=C/G;version=Hapmap1;RS=rs132106824;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220993071	220993170	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215472129;1allele=G/C;version=Hapmap2;RS=rs132106824;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220993683	220993782	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215472741;1allele=G/T;version=Hapmap2;RS=rs129408031;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	220994046	220994145	.	+	.	Name=Glutamate;B73v2_pos=3:215473104;1allele=C/G;version=Hapmap2;RS=rs129402154;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	220994306	220994405	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=3:215473364;1allele=T/C;version=Hapmap2;RS=rs802681855;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	220994370	220994469	.	+	.	Name=Glutamate;B73v2_pos=3:215473428;1allele=A/G;version=Hapmap2;RS=rs277280964;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	220995777	220995876	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215474835;1allele=C/T;version=Hapmap1;RS=rs132106861;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221000406	221000505	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215479464;1allele=T/A;version=Hapmap2;RS=rs132106964;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	221000475	221000574	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:215479533;1allele=A/G;version=Hapmap1;RS=rs132106965;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	221000598	221000697	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:215479656;1allele=G/C;version=Hapmap2;RS=rs822854940;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	221001673	221001772	.	+	.	Name=Days_to_silk;B73v2_pos=3:215480731;1allele=C/T;version=Hapmap2;RS=rs809727529;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221003012	221003111	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:215482071;1allele=T/C;version=Hapmap2;RS=rs823431077;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221003012	221003111	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215482071;1allele=T/C;version=Hapmap2;RS=rs823431077;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221003033	221003132	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:215482092;1allele=C/A;version=Hapmap2;RS=rs132106983;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221005192	221005291	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:215484251;1allele=T/C;version=Hapmap2;RS=rs831309417;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221038706	221038805	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215518992;1allele=C/T;version=Hapmap2;RS=rs840758131;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221049056	221049155	.	+	.	Name=Leaf_length;B73v2_pos=3:215528761;1allele=T/A;version=Hapmap2;RS=rs806610698;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	221066291	221066390	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215547606;1allele=C/T;version=Hapmap2;RS=rs818301478;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221070273	221070372	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215551590;1allele=A/G;version=Hapmap2;RS=rs819633538;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221071803	221071902	.	+	.	Name=Glucose;B73v2_pos=3:215553120;1allele=T/C;version=Hapmap2;RS=rs724607402;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221094629	221094728	.	+	.	Name=Days_to_silk;B73v2_pos=3:215575765;1allele=C/T;version=Hapmap2;RS=rs834189087;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221144919	221145018	.	+	.	Name=Leaf_length;B73v2_pos=3:215627245;1allele=T/C;version=Hapmap2;RS=rs839170095;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221146640	221146739	.	+	.	Name=Glucose;B73v2_pos=3:215628966;1allele=G/C;version=Hapmap2;RS=rs841231944;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	221148286	221148385	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215630612;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221175088	221175187	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:215657415;1allele=G/A;version=Hapmap2;RS=rs725926855;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221256615	221256714	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:215746088;1allele=A/G;version=Hapmap2;RS=rs1063103104;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221261753	221261852	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215750922;1allele=T/G;version=Hapmap2;RS=rs815961769;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	221264823	221264922	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215753992;1allele=G/A;version=Hapmap2;RS=rs844179926;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221265402	221265501	.	+	.	Name=Days_to_silk;B73v2_pos=3:215754570;1allele=G/A;version=Hapmap2;RS=rs823886097;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221269794	221269893	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215758962;1allele=G/A;version=Hapmap2;RS=rs838262123;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221270000	221270099	.	+	.	Name=Protein;B73v2_pos=3:215759168;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221276812	221276911	.	+	.	Name=Malate;B73v2_pos=3:215765980;1allele=A/C;version=Hapmap2;RS=rs129323675;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	221277951	221278050	.	+	.	Name=Leaf_width;B73v2_pos=3:215767119;1allele=G/A;version=Hapmap2;RS=rs277281332;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221358159	221358258	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:215841878;1allele=C/A;version=Hapmap2;RS=rs846952556;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	221362126	221362225	.	+	.	Name=Glutamate;B73v2_pos=3:215846332;1allele=G/A;version=Hapmap2;RS=rs725458452;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221362626	221362725	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:215846832;1allele=G/T;version=Hapmap2;RS=rs850260480;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	221363086	221363185	.	+	.	Name=Protein;B73v2_pos=3:215847292;1allele=G/A;version=Hapmap2;RS=rs129614274;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221365486	221365585	.	+	.	Name=Malate;B73v2_pos=3:215849692;1allele=A/G;version=Hapmap2;RS=rs277281457;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221372647	221372746	.	+	.	Name=Malate;B73v2_pos=3:215856853;1allele=C/T;version=Hapmap2;RS=rs277281487;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221421083	221421182	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:215906446;1allele=C/T;version=Hapmap2;RS=rs277281631;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221422080	221422179	.	+	.	Name=Malate;B73v2_pos=3:215907443;1allele=A/G;version=Hapmap2;RS=rs841005829;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221422391	221422490	.	+	.	Name=Malate;B73v2_pos=3:215907754;1allele=C/T;version=Hapmap2;RS=rs132107369;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221422748	221422847	.	+	.	Name=Malate;B73v2_pos=3:215908111;1allele=A/G;version=Hapmap1;RS=rs277281647;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221446757	221446856	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:215922217;1allele=T/G;version=Hapmap2;RS=rs841379428;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	221456303	221456402	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215931766;1allele=G/C;version=Hapmap2;RS=rs827683734;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	221456666	221456765	.	+	.	Name=Glucose;B73v2_pos=3:215932129;1allele=T/C;version=Hapmap2;RS=rs129416435;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221457090	221457189	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215932553;1allele=C/T;version=Hapmap1;RS=rs132107419;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221459229	221459328	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215934692;1allele=/CGAGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221459229	221459328	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:215934692;1allele=/CGAGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221469371	221469470	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:215944834;1allele=T/C;version=Hapmap2;RS=rs812719805;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221469453	221469552	.	+	.	Name=Malate;B73v2_pos=3:215944916;1allele=T/C;version=Hapmap2;RS=rs277281731;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221483807	221483906	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:216005374;1allele=G/T;version=Hapmap2;RS=rs811218402;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	221486502	221486601	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:216008069;1allele=G/A;version=Hapmap2;RS=rs277281739;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221538074	221538173	.	+	.	Name=Malate;B73v2_pos=3:216060651;1allele=T/C;version=Hapmap2;RS=rs804640822;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221538979	221539078	.	+	.	Name=Malate;B73v2_pos=3:216061556;1allele=C/T;version=Hapmap2;RS=rs836801042;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221603806	221603905	.	+	.	Name=Malate;B73v2_pos=3:216126677;1allele=G/T;version=Hapmap2;RS=rs840594826;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	221604573	221604672	.	+	.	Name=Malate;B73v2_pos=3:216127444;1allele=AT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221604808	221604907	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:216127679;1allele=G/C;version=Hapmap2;RS=rs841080456;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	221609168	221609267	.	+	.	Name=Malate;B73v2_pos=3:216132039;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221610364	221610463	.	+	.	Name=Malate;B73v2_pos=3:216133235;1allele=A/G;version=Hapmap1;RS=rs132107637;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221640163	221640262	.	+	.	Name=Malate;B73v2_pos=3:216163040;1allele=G/A;version=Hapmap2;RS=rs802612199;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221650453	221650552	.	+	.	Name=Malate;B73v2_pos=3:216173603;1allele=C/T;version=Hapmap2;RS=rs726716595;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221655767	221655866	.	+	.	Name=Malate;B73v2_pos=3:216178917;1allele=C/T;version=Hapmap2;RS=rs835403421;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	221655838	221655937	.	+	.	Name=Malate;B73v2_pos=3:216178988;1allele=T/C;version=Hapmap1;RS=rs825472954;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221665957	221666056	.	+	.	Name=Days_to_silk;B73v2_pos=3:216189107;1allele=A/G;version=Hapmap2;RS=rs277281909;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221669602	221669701	.	+	.	Name=Total_amino_acids;B73v2_pos=3:216192752;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221671991	221672090	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:216165330;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221690922	221691021	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:216213260;1allele=G/A;version=Hapmap2;RS=rs805126264;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221712872	221712971	.	+	.	Name=Malate;B73v2_pos=3:216235278;1allele=G/T;version=Hapmap2;RS=rs277281959;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	221720534	221720633	.	+	.	Name=Malate;B73v2_pos=3:216242941;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221720537	221720636	.	+	.	Name=Malate;B73v2_pos=3:216242944;1allele=G/A;version=Hapmap2;RS=rs834725576;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221721182	221721281	.	+	.	Name=Malate;B73v2_pos=3:216243589;1allele=A/G;version=Hapmap2;RS=rs1061324021;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	221733125	221733224	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:216255535;1allele=C/A;version=Hapmap2;RS=rs726237849;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	221733582	221733681	.	+	.	Name=Days_to_silk;B73v2_pos=3:216255992;1allele=C/G;version=Hapmap2;RS=rs129550186;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	221742179	221742278	.	+	.	Name=Protein;B73v2_pos=3:216267185;1allele=C/T;version=Hapmap2;RS=rs132107788;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221826454	221826553	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:216345987;1allele=G/A;version=Hapmap2;RS=rs841563873;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221827499	221827598	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:216347032;1allele=G/A;version=Hapmap2;RS=rs277282145;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221827499	221827598	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:216347032;1allele=G/A;version=Hapmap2;RS=rs277282145;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	221829901	221830000	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:216349434;1allele=C/T;version=Hapmap2;RS=rs277282147;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221829901	221830000	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:216349434;1allele=C/T;version=Hapmap2;RS=rs277282147;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	221850196	221850295	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:216374095;1allele=G/T;version=Hapmap2;RS=rs838899076;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	221897282	221897381	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:216420164;1allele=T/A;version=Hapmap2;RS=rs129343707;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	221941583	221941682	.	+	.	Name=Malate;B73v2_pos=3:216464470;1allele=C/A;version=Hapmap1;RS=rs132107981;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	221955471	221955570	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:216470143;1allele=C/A;version=Hapmap2;RS=rs129454031;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	221959270	221959369	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:216473942;1allele=T/A;version=Hapmap2;RS=rs1063438948;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	221959437	221959536	.	+	.	Name=Days_to_silk;B73v2_pos=3:216474109;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	221960203	221960302	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:216474875;1allele=G/T;version=Hapmap2;RS=rs277282409;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	221963397	221963496	.	+	.	Name=Malate;B73v2_pos=3:216478069;1allele=A/C;version=Hapmap1;RS=rs132108168;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	222011894	222011993	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:216524141;1allele=T/C;version=Hapmap2;RS=rs844434922;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222013942	222014041	.	+	.	Name=Total_amino_acids;B73v2_pos=3:216526188;1allele=A/C;version=Hapmap2;RS=rs814732795;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	222014068	222014167	.	+	.	Name=Total_amino_acids;B73v2_pos=3:216526314;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222014193	222014292	.	+	.	Name=Total_amino_acids;B73v2_pos=3:216526439;1allele=A/T;version=Hapmap2;RS=rs826306539;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	222014690	222014789	.	+	.	Name=Total_amino_acids;B73v2_pos=3:216526936;1allele=G/T;version=Hapmap2;RS=rs827325760;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	222014698	222014797	.	+	.	Name=Total_amino_acids;B73v2_pos=3:216526944;1allele=G/A;version=Hapmap2;RS=rs822824352;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	222018409	222018508	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:216530656;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222019555	222019654	.	+	.	Name=Leaf_length;B73v2_pos=3:216531810;1allele=T/C;version=Hapmap2;RS=rs826256929;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222075635	222075734	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:216590411;1allele=G/T;version=Hapmap2;RS=rs821458196;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	222075651	222075750	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:216590427;1allele=A/G;version=Hapmap2;RS=rs808328200;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	222080134	222080233	.	+	.	Name=Leaf_length;B73v2_pos=3:216594910;1allele=C/T;version=Hapmap2;RS=rs811189518;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222080634	222080733	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:216595410;1allele=A/T;version=Hapmap2;RS=rs277282563;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	222080634	222080733	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:216595410;1allele=A/T;version=Hapmap2;RS=rs277282563;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	222083664	222083763	.	+	.	Name=Protein;B73v2_pos=3:216598440;1allele=C/T;version=Hapmap2;RS=rs848803526;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222195706	222195805	.	+	.	Name=Malate;B73v2_pos=3:216703294;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222207460	222207559	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:216716326;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222209151	222209250	.	+	.	Name=Leaf_width;B73v2_pos=3:216718017;1allele=G/A;version=Hapmap2;RS=rs834044929;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	222216698	222216797	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:216725564;1allele=C/T;version=Hapmap2;RS=rs129270950;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222340263	222340362	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:216844370;1allele=T/G;version=Hapmap2;RS=rs846339149;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	222349385	222349484	.	+	.	Name=Leaf_width;B73v2_pos=3:216853491;1allele=C/T;version=Hapmap2;RS=rs836171304;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222453921	222454020	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:216949478;1allele=C/T;version=Hapmap2;RS=rs824216882;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222463923	222464022	.	+	.	Name=Protein;B73v2_pos=3:216959481;1allele=C/T;version=Hapmap2;RS=rs129577053;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222466937	222467036	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:216962495;1allele=A/G;version=Hapmap2;RS=rs838944320;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	222482921	222483020	.	+	.	Name=Malate;B73v2_pos=3:216979257;1allele=A/G;version=Hapmap2;RS=rs818747909;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	222487335	222487434	.	+	.	Name=Leaf_width;B73v2_pos=3:216983671;1allele=G/C;version=Hapmap2;RS=rs835766082;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	222487554	222487653	.	+	.	Name=Leaf_width;B73v2_pos=3:216983890;1allele=C/T;version=Hapmap2;RS=rs820675288;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222502021	222502120	.	+	.	Name=Malate;B73v2_pos=3:217004755;1allele=T/A;version=Hapmap2;RS=rs129543158;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	222503326	222503425	.	+	.	Name=Total_amino_acids;B73v2_pos=3:217006060;1allele=G/A;version=Hapmap2;RS=rs808330019;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	222504737	222504836	.	+	.	Name=Leaf_length;B73v2_pos=3:217007471;1allele=/ATTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222505213	222505312	.	+	.	Name=Chlorophyll_A;B73v2_pos=3:217007947;1allele=/TCGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222507906	222508005	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:217010640;1allele=G/A;version=Hapmap2;RS=rs129467463;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	222512660	222512759	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:216998293;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222577921	222578020	.	+	.	Name=Days_to_silk;B73v2_pos=3:217075401;1allele=C/T;version=Hapmap2;RS=rs129372494;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222596356	222596455	.	+	.	Name=Total_amino_acids;B73v2_pos=3:217096655;1allele=G/A;version=Hapmap1;RS=rs132108820;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	222615582	222615681	.	+	.	Name=Leaf_width;B73v2_pos=3:217115797;1allele=A/G;version=Hapmap2;RS=rs726768213;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	222616036	222616135	.	+	.	Name=Leaf_width;B73v2_pos=3:217116251;1allele=A/G;version=Hapmap2;RS=rs726917549;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	222618514	222618613	.	+	.	Name=Leaf_width;B73v2_pos=3:217118730;1allele=G/A;version=Hapmap2;RS=rs827833300;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	222665356	222665455	.	+	.	Name=Leaf_width;B73v2_pos=3:217136609;1allele=A/T;version=Hapmap2;RS=rs808581486;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	222687308	222687407	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:217158561;1allele=T/C;version=Hapmap2;RS=rs277283334;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222734736	222734835	.	+	.	Name=Leaf_width;B73v2_pos=3:217204942;1allele=G/A;version=Hapmap2;RS=rs844848973;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	222759826	222759925	.	+	.	Name=Ear_height;B73v2_pos=3:217229898;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222776944	222777043	.	+	.	Name=Leaf_length;B73v2_pos=3:217247016;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222777101	222777200	.	+	.	Name=Ear_row_number;B73v2_pos=3:217247173;1allele=C/T;version=Hapmap2;RS=rs1064624196;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222778275	222778374	.	+	.	Name=Ear_row_number;B73v2_pos=3:217248347;1allele=T/A;version=Hapmap2;RS=rs277283792;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	222780013	222780112	.	+	.	Name=Ear_row_number;B73v2_pos=3:217250085;1allele=C/T;version=Hapmap2;RS=rs277283818;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222789322	222789421	.	+	.	Name=Ear_row_number;B73v2_pos=3:217259394;1allele=G/C;version=Hapmap2;RS=rs277283877;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	222799745	222799844	.	+	.	Name=Glucose;B73v2_pos=3:217291460;1allele=G/C;version=Hapmap2;RS=rs132109177;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	222800471	222800570	.	+	.	Name=Cob_diameter;B73v2_pos=3:217292186;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222814356	222814455	.	+	.	Name=Ear_row_number;B73v2_pos=3:217306078;1allele=T/C;version=Hapmap2;RS=rs834154592;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222834913	222835012	.	+	.	Name=Leaf_width;B73v2_pos=3:217271494;1allele=G/T;version=Hapmap2;RS=rs724791392;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	222835640	222835739	.	+	.	Name=Leaf_width;B73v2_pos=3:217272221;1allele=G/T;version=Hapmap2;RS=rs836403696;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	222837115	222837214	.	+	.	Name=Leaf_width;B73v2_pos=3:217273697;1allele=C/T;version=Hapmap2;RS=rs827555158;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222837600	222837699	.	+	.	Name=Leaf_width;B73v2_pos=3:217274182;1allele=A/G;version=Hapmap2;RS=rs805617048;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	222845226	222845325	.	+	.	Name=Leaf_width;B73v2_pos=3:217281809;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	222879868	222879967	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:217355474;1allele=T/C;version=Hapmap2;RS=rs277283986;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222880439	222880538	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:217356045;1allele=T/C;version=Hapmap2;RS=rs129475450;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	222880456	222880555	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:217356062;1allele=C/T;version=Hapmap2;RS=rs129452084;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	222980656	222980755	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:217456201;1allele=A/C;version=Hapmap2;RS=rs823883446;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	223087883	223087982	.	+	.	Name=Days_to_silk;B73v2_pos=3:217561300;1allele=T/C;version=Hapmap2;RS=rs132110251;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	223088163	223088262	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:217561580;1allele=G/C;version=Hapmap1;RS=rs129521817;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	223088323	223088422	.	+	.	Name=Total_amino_acids;B73v2_pos=3:217561740;1allele=A/T;version=Hapmap2;RS=rs807223255;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	223098850	223098949	.	+	.	Name=Leaf_width;B73v2_pos=3:217572267;1allele=C/T;version=Hapmap1;RS=rs132110183;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	223159055	223159154	.	+	.	Name=Days_to_silk;B73v2_pos=3:217633637;1allele=T/G;version=Hapmap2;RS=rs129574502;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	223164568	223164667	.	+	.	Name=Cob_diameter;B73v2_pos=3:217639150;1allele=G/T;version=Hapmap2;RS=rs804175970;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	223167308	223167407	.	+	.	Name=Ear_row_number;B73v2_pos=3:217641890;1allele=A/C;version=Hapmap2;RS=rs846037461;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	223167357	223167456	.	+	.	Name=Cob_diameter;B73v2_pos=3:217641939;1allele=T/C;version=Hapmap2;RS=rs277284778;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223177736	223177835	.	+	.	Name=Ear_row_number;B73v2_pos=3:217651103;1allele=G/A;version=Hapmap1;RS=rs132109720;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	223179832	223179931	.	+	.	Name=Ear_row_number;B73v2_pos=3:217653197;1allele=T/C;version=Hapmap2;RS=rs814550190;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	223179942	223180041	.	+	.	Name=Ear_row_number;B73v2_pos=3:217653307;1allele=A/T;version=Hapmap2;RS=rs801538533;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	223183297	223183396	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:217656662;1allele=GC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	223185736	223185835	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:217659101;1allele=T/C;version=Hapmap2;RS=rs818650028;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223186487	223186586	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:217659852;1allele=T/C;version=Hapmap1;RS=rs277284798;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	223190517	223190616	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:217663952;1allele=C/G;version=Hapmap1;RS=rs132109877;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223190825	223190924	.	+	.	Name=Cob_diameter;B73v2_pos=3:217664260;1allele=T/C;version=Hapmap2;RS=rs132109891;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	223191267	223191366	.	+	.	Name=Days_to_silk;B73v2_pos=3:217664702;1allele=C/G;version=Hapmap2;RS=rs129294208;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	223191271	223191370	.	+	.	Name=Days_to_silk;B73v2_pos=3:217664706;1allele=A/G;version=Hapmap2;RS=rs808210783;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	223191271	223191370	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:217664706;1allele=A/G;version=Hapmap2;RS=rs808210783;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	223224339	223224438	.	+	.	Name=Days_to_silk;B73v2_pos=3:217697822;1allele=G/A;version=Hapmap2;RS=rs129290698;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	223224339	223224438	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:217697822;1allele=G/A;version=Hapmap2;RS=rs129290698;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	223225432	223225531	.	+	.	Name=Days_to_silk;B73v2_pos=3:217698915;1allele=G/A;version=Hapmap2;RS=rs808577089;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	223234457	223234555	.	+	.	Name=Days_to_silk;B73v2_pos=3:217713676;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	223329215	223329314	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:217802143;1allele=G/T;version=Hapmap2;RS=rs129295728;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	223348855	223348954	.	+	.	Name=Cob_diameter;B73v2_pos=3:217821886;1allele=C/A;version=Hapmap2;RS=rs129602951;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	223354804	223354903	.	+	.	Name=Ear_row_number;B73v2_pos=3:217827835;1allele=C/G;version=Hapmap2;RS=rs805876172;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	223397299	223397398	.	+	.	Name=Days_to_silk;B73v2_pos=3:217869018;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	223405964	223406063	.	+	.	Name=Ear_row_number;B73v2_pos=3:217877683;1allele=G/T;version=Hapmap1;RS=rs829984713;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	223408059	223408158	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:217879778;1allele=G/C;version=Hapmap2;RS=rs822731989;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	223421385	223421484	.	+	.	Name=Days_to_silk;B73v2_pos=3:217893103;1allele=A/G;version=Hapmap2;RS=rs814838620;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	223427145	223427244	.	+	.	Name=Ear_row_number;B73v2_pos=3:217898863;1allele=C/T;version=Hapmap2;RS=rs277285331;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	223427155	223427254	.	+	.	Name=Ear_row_number;B73v2_pos=3:217898873;1allele=C/T;version=Hapmap2;RS=rs132110655;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	223431916	223432015	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:217903634;1allele=C/G;version=Hapmap2;RS=rs129404215;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	223462959	223463058	.	+	.	Name=Days_to_silk;B73v2_pos=3:217934618;1allele=C/T;version=Hapmap2;RS=rs277285416;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223463420	223463519	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:217935079;1allele=C/G;version=Hapmap2;RS=rs129343356;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	223463568	223463667	.	+	.	Name=Days_to_silk;B73v2_pos=3:217935227;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	223469519	223469618	.	+	.	Name=Cob_diameter;B73v2_pos=3:217941174;1allele=T/C;version=Hapmap2;RS=rs1063371234;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223470460	223470559	.	+	.	Name=Cob_diameter;B73v2_pos=3:217942115;1allele=A/G;version=Hapmap2;RS=rs846636425;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	223505623	223505722	.	+	.	Name=Tassel_length;B73v2_pos=1:250033225;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	223554351	223554450	.	+	.	Name=Days_to_silk;B73v2_pos=3:218025962;1allele=C/T;version=Hapmap2;RS=rs811543029;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223672454	223672553	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:218138943;1allele=G/A;version=Hapmap2;RS=rs1061786174;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	223692055	223692154	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:218158655;1allele=C/T;version=Hapmap2;RS=rs826439015;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223710503	223710602	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:218177105;1allele=T/A;version=Hapmap2;RS=rs277286400;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	223713821	223713920	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:218180423;1allele=A/C;version=Hapmap2;RS=rs277286433;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223716914	223717013	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:218183516;1allele=T/C;version=Hapmap2;RS=rs830098799;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	223717343	223717442	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:218183945;1allele=C/T;version=Hapmap2;RS=rs277286465;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	223725849	223725948	.	+	.	Name=Days_to_silk;B73v2_pos=3:218192451;1allele=C/A;version=Hapmap2;RS=rs838623139;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	223727518	223727617	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:218194120;1allele=G/C;version=Hapmap2;RS=rs809294712;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	223847030	223847129	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:218277369;1allele=C/T;version=Hapmap2;RS=rs725191184;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	223881537	223881636	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:218345904;1allele=C/T;version=Hapmap2;RS=rs129433783;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224013646	224013745	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:218485549;1allele=A/G;version=Hapmap2;RS=rs129518664;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	224129143	224129242	.	+	.	Name=Stalk_strength;B73v2_pos=3:218589764;1allele=G/A;version=Hapmap2;RS=rs724612462;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	224146939	224147038	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:218607558;1allele=G/A;version=Hapmap2;RS=rs825343223;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	224156980	224157079	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:218617599;1allele=C/T;version=Hapmap2;RS=rs843711336;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224224332	224224431	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:218673369;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	224355907	224356006	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:218811255;1allele=C/T;version=Hapmap2;RS=rs817332169;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224355907	224356006	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:218811255;1allele=C/T;version=Hapmap2;RS=rs817332169;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224355907	224356006	.	+	.	Name=Days_to_silk;B73v2_pos=3:218811255;1allele=C/T;version=Hapmap2;RS=rs817332169;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224378741	224378840	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:218834119;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	224378919	224379018	.	+	.	Name=Cob_diameter;B73v2_pos=3:218834297;1allele=+/-;version=Hapmap2;RS=rs843445389;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	224439234	224439333	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:218895165;1allele=T/C;version=Hapmap1;RS=rs132111639;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	224439305	224439404	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:218895236;1allele=G/C;version=Hapmap1;RS=rs725421635;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	224439305	224439404	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=3:218895236;1allele=G/C;version=Hapmap1;RS=rs725421635;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	224449155	224449254	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:218905085;1allele=T/C;version=Hapmap2;RS=rs277287168;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	224513861	224513960	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:218968944;1allele=A/G;version=Hapmap2;RS=rs1064421373;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	224550304	224550403	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:219004590;1allele=A/G;version=Hapmap2;RS=rs806733833;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	224594850	224594949	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:219049823;1allele=A/T;version=Hapmap2;RS=rs1060823398;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	224643920	224644019	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:219099519;1allele=A/G;version=Hapmap2;RS=rs829062664;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	224657499	224657598	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:219113104;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	224722959	224723058	.	+	.	Name=Leaf_width;B73v2_pos=3:219180902;1allele=G/A;version=Hapmap1;RS=rs839454000;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	224723862	224723961	.	+	.	Name=Days_to_silk;B73v2_pos=3:219181805;1allele=C/T;version=Hapmap2;RS=rs801961630;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224724327	224724426	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219182270;1allele=/TTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	224725161	224725260	.	+	.	Name=Ear_row_number;B73v2_pos=3:219183104;1allele=G/C;version=Hapmap1;RS=rs132111821;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	224741957	224742056	.	+	.	Name=Ear_row_number;B73v2_pos=3:219199900;1allele=C/T;version=Hapmap1;RS=rs129272278;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224753653	224753752	.	+	.	Name=Ear_row_number;B73v2_pos=3:219211793;1allele=T/C;version=Hapmap2;RS=rs811509848;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	224775337	224775436	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:219232992;1allele=C/T;version=Hapmap2;RS=rs819793741;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224775909	224776008	.	+	.	Name=Ear_row_number;B73v2_pos=3:219233564;1allele=G/A;version=Hapmap2;RS=rs277287555;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	224793313	224793412	.	+	.	Name=Ear_row_number;B73v2_pos=3:219250986;1allele=G/A;version=Hapmap2;RS=rs129374065;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	224793903	224794002	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:219251576;1allele=C/A;version=Hapmap2;RS=rs816932389;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	224794960	224795059	.	+	.	Name=Leaf_width;B73v2_pos=3:219252633;1allele=T/C;version=Hapmap2;RS=rs842035277;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	224797727	224797826	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219255400;1allele=C/T;version=Hapmap2;RS=rs844912677;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224950714	224950813	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:219398419;1allele=A/G;version=Hapmap2;RS=rs132112162;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	224952817	224952916	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:219400522;1allele=T/C;version=Hapmap2;RS=rs816852816;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	224953359	224953458	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:219401064;1allele=A/G;version=Hapmap2;RS=rs1061734210;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	224984697	224984796	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:219432403;1allele=A/G;version=Hapmap2;RS=rs845948929;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	224986869	224986968	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:219434575;1allele=T/C;version=Hapmap1;RS=rs129463275;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	225028480	225028579	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:219466861;1allele=G/A;version=Hapmap2;RS=rs832173414;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	225032271	225032370	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:219470652;1allele=C/T;version=Hapmap2;RS=rs807817361;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	225047496	225047595	.	+	.	Name=Total_amino_acids;B73v2_pos=3:219485900;1allele=T/G;version=Hapmap1;RS=rs129517717;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	225047652	225047751	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:219486056;1allele=G/T;version=Hapmap2;RS=rs823734080;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	225063641	225063740	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:219511439;1allele=T/C;version=Hapmap2;RS=rs277288075;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	225113398	225113497	.	+	.	Name=Ear_height;B73v2_pos=3:219569058;1allele=G/A;version=Hapmap2;RS=rs838361259;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	225118599	225118698	.	+	.	Name=Days_to_silk;B73v2_pos=3:219574259;1allele=G/A;version=Hapmap2;RS=rs840092219;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	225118599	225118698	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219574259;1allele=G/A;version=Hapmap2;RS=rs840092219;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	225259156	225259255	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:219695170;1allele=A/G;version=Hapmap2;RS=rs277288680;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	225306025	225306124	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:219739949;1allele=A/T;version=Hapmap2;RS=rs841575402;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	225318412	225318511	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:219751929;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	225361164	225361263	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219801278;1allele=T/A;version=Hapmap2;RS=rs823398732;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	225397611	225397710	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219828783;1allele=/GAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	225404122	225404221	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:219835204;1allele=C/G;version=Hapmap2;RS=rs846189592;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	225427193	225427292	.	+	.	Name=Ear_row_number;B73v2_pos=3:219858274;1allele=C/T;version=Hapmap2;RS=rs810098242;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	225428025	225428124	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219859106;1allele=G/A;version=Hapmap2;RS=rs813867751;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	225428499	225428598	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:239526282;1allele=A/C;version=Hapmap2;RS=rs807361631;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	225458746	225458845	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:219889828;1allele=A/T;version=Hapmap2;RS=rs277289191;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	225479391	225479490	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219910477;1allele=C/G;version=Hapmap2;RS=rs845100603;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	225562167	225562266	.	+	.	Name=Days_to_silk;B73v2_pos=3:219995634;1allele=G/A;version=Hapmap2;RS=rs819398593;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	225870205	225870304	.	+	.	Name=Total_amino_acids;B73v2_pos=3:220303295;1allele=A/G;version=Hapmap2;RS=rs836379120;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	226127006	226127105	.	+	.	Name=Total_amino_acids;B73v2_pos=3:220533826;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	226129566	226129665	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:220531117;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	226166925	226167024	.	+	.	Name=Total_amino_acids;B73v2_pos=3:220585512;1allele=G/T;version=Hapmap2;RS=rs836781700;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	226224613	226224712	.	+	.	Name=Total_amino_acids;B73v2_pos=3:220642494;1allele=A/G;version=Hapmap2;RS=rs277290777;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	226240592	226240691	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:220658469;1allele=A/C;version=Hapmap2;RS=rs129411429;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	226243855	226243954	.	+	.	Name=Chlorophyll_B;B73v2_pos=3:220661732;1allele=G/T;version=Hapmap2;RS=rs849097849;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	226245813	226245912	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:220663690;1allele=T/C;version=Hapmap2;RS=rs277290925;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	226287931	226288030	.	+	.	Name=Malate;B73v2_pos=3:220706636;1allele=G/A;version=Hapmap2;RS=rs129302513;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	226360955	226361054	.	+	.	Name=Days_to_silk;B73v2_pos=3:220750935;1allele=G/A;version=Hapmap2;RS=rs129483855;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	226373346	226373445	.	+	.	Name=Days_to_silk;B73v2_pos=3:220763326;1allele=G/T;version=Hapmap2;RS=rs848741809;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	226376595	226376694	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:220766574;1allele=T/G;version=Hapmap2;RS=rs821425204;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	226379099	226379198	.	+	.	Name=Days_to_silk;B73v2_pos=3:220769078;1allele=G/C;version=Hapmap1;RS=rs132113935;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	226379312	226379411	.	+	.	Name=Protein;B73v2_pos=3:220769291;1allele=G/C;version=Hapmap1;RS=rs132113939;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	226421654	226421753	.	+	.	Name=Days_to_silk;B73v2_pos=3:220810990;1allele=C/T;version=Hapmap2;RS=rs805353766;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	226463590	226463689	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:220852754;1allele=/GTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	226864806	226864905	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:221244544;1allele=T/C;version=Hapmap2;RS=rs726287548;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	226915415	226915514	.	+	.	Name=Ear_row_number;B73v2_pos=3:221304674;1allele=C/G;version=Hapmap2;RS=rs847231537;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	226922598	226922697	.	+	.	Name=Tassel_length;B73v2_pos=3:221311857;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	227018521	227018620	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221406518;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	227112338	227112437	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221486264;1allele=C/T;version=Hapmap2;RS=rs838537190;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	227155611	227155710	.	+	.	Name=Cob_diameter;B73v2_pos=3:221540499;1allele=G/C;version=Hapmap1;RS=rs132114806;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	227174112	227174211	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:221559232;1allele=-/G;version=Hapmap1;RS=rs869386158;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	227177301	227177400	.	+	.	Name=Cob_diameter;B73v2_pos=3:221562421;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	227231778	227231877	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:221615575;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	227240206	227240305	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:221624004;1allele=G/A;version=Hapmap2;RS=rs813918575;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	227243349	227243448	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:221627147;1allele=G/A;version=Hapmap2;RS=rs277293172;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	227286181	227286280	.	+	.	Name=Glucose;B73v2_pos=3:221667135;1allele=C/T;version=Hapmap2;RS=rs828080477;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	227312218	227312317	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221693176;1allele=T/C;version=Hapmap2;RS=rs802884510;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	227312233	227312332	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:221693191;1allele=T/G;version=Hapmap2;RS=rs831535778;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	227312482	227312581	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221693440;1allele=T/C;version=Hapmap2;RS=rs840955608;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	227316878	227316977	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221697836;1allele=T/C;version=Hapmap2;RS=rs810708057;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	227317495	227317594	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221698453;1allele=A/G;version=Hapmap2;RS=rs817819503;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	227443754	227443853	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221870640;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	227478140	227478239	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:221836334;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	227547833	227547932	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:221917456;1allele=G/T;version=Hapmap2;RS=rs129452918;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	227617560	227617659	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:221987936;1allele=C/T;version=Hapmap2;RS=rs815872299;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	228088334	228088433	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:222478187;1allele=C/T;version=Hapmap1;RS=rs132115943;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	228125689	228125788	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222511285;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	228129506	228129605	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222507468;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	228163087	228163186	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:222553042;1allele=A/C;version=Hapmap2;RS=rs848753321;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	228175969	228176068	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222565924;1allele=C/T;version=Hapmap2;RS=rs808871875;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	228183770	228183869	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222573719;1allele=T/G;version=Hapmap2;RS=rs831134250;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	228205400	228205499	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222595349;1allele=C/A;version=Hapmap1;RS=rs839130546;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	228206530	228206629	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:222596898;1allele=C/G;version=Hapmap2;RS=rs129270497;2ref_allele=C;3alt_allele=G
chr3	Wallace_2014	SNP	228208446	228208545	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222598814;1allele=G/T;version=Hapmap2;RS=rs816968486;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	228222717	228222816	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222613085;1allele=G/A;version=Hapmap2;RS=rs815720753;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	228230091	228230190	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222620459;1allele=G/A;version=Hapmap2;RS=rs847325815;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	228256987	228257086	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222647471;1allele=T/C;version=Hapmap2;RS=rs824388838;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	228368608	228368707	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:222746152;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	228376894	228376993	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222737864;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	228413036	228413135	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:222769409;1allele=T/A;version=Hapmap2;RS=rs849237752;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	228780058	228780157	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:223137717;1allele=C/T;version=Hapmap2;RS=rs833539095;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	228797940	228798039	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:223155600;1allele=T/C;version=Hapmap2;RS=rs823173438;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	228975531	228975630	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:223361046;1allele=G/A;version=Hapmap2;RS=rs842361839;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	229311250	229311349	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:223690413;1allele=T/C;version=Hapmap2;RS=rs277296185;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	229411470	229411569	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:223788870;1allele=G/A;version=Hapmap2;RS=rs807050390;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	229451988	229452087	.	+	.	Name=Ear_height;B73v2_pos=3:223829371;1allele=A/C;version=Hapmap2;RS=rs132117312;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	229451988	229452087	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:223829371;1allele=A/C;version=Hapmap2;RS=rs132117312;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	229456027	229456126	.	+	.	Name=Ear_height;B73v2_pos=3:223833410;1allele=T/C;version=Hapmap2;RS=rs129499380;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	229460974	229461073	.	+	.	Name=Ear_height;B73v2_pos=3:223838357;1allele=T/C;version=Hapmap2;RS=rs277296496;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	229615638	229615737	.	+	.	Name=Malate;B73v2_pos=3:223996665;1allele=A/G;version=Hapmap2;RS=rs834555435;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	229617211	229617310	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:223998238;1allele=A/G;version=Hapmap2;RS=rs806171979;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	229618411	229618510	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:223999438;1allele=G/A;version=Hapmap1;RS=rs132117584;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	229653319	229653418	.	+	.	Name=Malate;B73v2_pos=3:224034346;1allele=C/A;version=Hapmap2;RS=rs277297009;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	229749254	229749353	.	+	.	Name=Days_to_silk;B73v2_pos=3:224130297;1allele=T/G;version=Hapmap2;RS=rs833018329;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	229753794	229753893	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:224134837;1allele=T/C;version=Hapmap2;RS=rs825572248;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	229763568	229763667	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:224144611;1allele=T/C;version=Hapmap2;RS=rs277297225;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	229816730	229816829	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:224187322;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	229898040	229898139	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:224275015;1allele=A/G;version=Hapmap2;RS=rs816659539;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	230032342	230032441	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:224393206;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	230096561	230096660	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:224473981;1allele=A/G;version=Hapmap2;RS=rs811006167;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	230105093	230105192	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:224482511;1allele=A/G;version=Hapmap2;RS=rs129520375;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	230113125	230113224	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:224490543;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	230164394	230164493	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:224541176;1allele=T/A;version=Hapmap2;RS=rs132118320;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	230172501	230172600	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:224549283;1allele=C/T;version=Hapmap2;RS=rs277297922;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	230176484	230176583	.	+	.	Name=Glucose;B73v2_pos=3:224553266;1allele=C/T;version=Hapmap2;RS=rs129383691;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	230201812	230201911	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:224579595;1allele=A/G;version=Hapmap2;RS=rs845979051;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	230221227	230221326	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:224599011;1allele=A/G;version=Hapmap2;RS=rs817118840;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	230262029	230262128	.	+	.	Name=Cob_diameter;B73v2_pos=3:224631614;1allele=G/A;version=Hapmap2;RS=rs129420603;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	230304263	230304362	.	+	.	Name=Ear_height;B73v2_pos=3:224673849;1allele=A/G;version=Hapmap2;RS=rs845268035;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	230304263	230304362	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:224673849;1allele=A/G;version=Hapmap2;RS=rs845268035;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	230309318	230309417	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:224678904;1allele=C/T;version=Hapmap2;RS=rs829681374;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	230454633	230454732	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:224834877;1allele=G/T;version=Hapmap2;RS=rs844220036;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	230455907	230456006	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:224836151;1allele=T/A;version=Hapmap2;RS=rs837832810;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	230736404	230736503	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:225095662;1allele=G/T;version=Hapmap2;RS=rs129614429;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	230757764	230757863	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:225117025;1allele=G/A;version=Hapmap2;RS=rs830580294;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	230812542	230812641	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:225167006;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	230913979	230914078	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:225266063;1allele=G/A;version=Hapmap2;RS=rs832278732;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	230960591	230960690	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:225310332;1allele=G/A;version=Hapmap2;RS=rs808127227;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	230988430	230988529	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:225335135;1allele=G/C;version=Hapmap2;RS=rs822841341;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	231001723	231001822	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:225348428;1allele=A/G;version=Hapmap2;RS=rs831442632;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	231001723	231001822	.	+	.	Name=Days_to_silk;B73v2_pos=3:225348428;1allele=A/G;version=Hapmap2;RS=rs831442632;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	231121204	231121303	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:225459825;1allele=C/A;version=Hapmap2;RS=rs845558842;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	231121642	231121741	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:225460263;1allele=G/A;version=Hapmap2;RS=rs132119530;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	231121642	231121741	.	+	.	Name=Ear_height;B73v2_pos=3:225460263;1allele=G/A;version=Hapmap2;RS=rs132119530;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	231121642	231121741	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:225460263;1allele=G/A;version=Hapmap2;RS=rs132119530;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	231121815	231121914	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:225460436;1allele=A/G;version=Hapmap2;RS=rs843637451;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	231440371	231440470	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:225761315;1allele=G/A;version=Hapmap2;RS=rs277300281;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	231449519	231449618	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225770463;1allele=A/G;version=Hapmap2;RS=rs129324691;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	231449783	231449882	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225770727;1allele=A/G;version=Hapmap2;RS=rs129563908;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	231449932	231450031	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225770876;1allele=C/T;version=Hapmap2;RS=rs812553093;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	231450041	231450140	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225770985;1allele=A/C;version=Hapmap2;RS=rs846400022;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	231450567	231450666	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225771511;1allele=T/C;version=Hapmap2;RS=rs726444552;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	231451015	231451114	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225771959;1allele=T/C;version=Hapmap2;RS=rs726041036;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	231454685	231454784	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:225775629;1allele=A/T;version=Hapmap2;RS=rs820180755;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	231457362	231457461	.	+	.	Name=Glutamate;B73v2_pos=3:225778306;1allele=T/C;version=Hapmap2;RS=rs812603528;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	231458092	231458191	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225779036;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	231459859	231459958	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:225780803;1allele=G/-;version=Hapmap1;RS=rs132119752;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	231463692	231463791	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:225784636;1allele=G/C;version=Hapmap2;RS=rs132119754;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	231525937	231526036	.	+	.	Name=Ear_height;B73v2_pos=3:225824432;1allele=C/T;version=Hapmap2;RS=rs822236853;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	231526757	231526856	.	+	.	Name=Ear_height;B73v2_pos=3:225825252;1allele=A/C;version=Hapmap2;RS=rs833881495;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	231817556	231817655	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:226155039;1allele=A/G;version=Hapmap2;RS=rs802445347;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	232050218	232050317	.	+	.	Name=Ear_height;B73v2_pos=3:226271344;1allele=A/G;version=Hapmap2;RS=rs809688213;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	232149646	232149745	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:226383553;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	232208277	232208376	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:226429152;1allele=A/G;version=Hapmap2;RS=rs820607179;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	232238496	232238595	.	+	.	Name=Days_to_silk;B73v2_pos=3:226459378;1allele=A/G;version=Hapmap2;RS=rs809952294;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	232264857	232264956	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:226488288;1allele=A/G;version=Hapmap2;RS=rs841771945;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	232264857	232264956	.	+	.	Name=Ear_height;B73v2_pos=3:226488288;1allele=A/G;version=Hapmap2;RS=rs841771945;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	232267928	232268027	.	+	.	Name=Ear_height;B73v2_pos=3:226491359;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	232267928	232268027	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:226491359;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	232268941	232269040	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:226492371;1allele=G/A;version=Hapmap2;RS=rs831703729;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	232268941	232269040	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:226492371;1allele=G/A;version=Hapmap2;RS=rs831703729;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	232552457	232552556	.	+	.	Name=Ear_height;B73v2_pos=3:226775394;1allele=TG/;version=Hapmap1;RS=rs132120372;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	232609282	232609381	.	+	.	Name=Glutamate;B73v2_pos=3:226822914;1allele=G/A;version=Hapmap1;RS=rs132120574;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	232609449	232609548	.	+	.	Name=Ear_height;B73v2_pos=3:226823081;1allele=T/G;version=Hapmap1;RS=rs132120576;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	232649354	232649453	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:226865061;1allele=G/T;version=Hapmap2;RS=rs803926147;2ref_allele=G;3alt_allele=T
chr3	Wallace_2014	SNP	232756541	232756640	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:226976104;1allele=G/A;version=Hapmap2;RS=rs132120817;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	232772196	232772295	.	+	.	Name=Cob_diameter;B73v2_pos=3:226991758;1allele=C/A;version=Hapmap2;RS=rs129329314;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	232844107	232844206	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:227064348;1allele=A/G;version=Hapmap2;RS=rs129458371;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	232859453	232859552	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:227079518;1allele=G/C;version=Hapmap2;RS=rs850035388;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	232859456	232859555	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:227079521;1allele=T/C;version=Hapmap2;RS=rs802665438;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	232973953	232974052	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:227194104;1allele=T/G;version=Hapmap2;RS=rs132121144;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	233002465	233002564	.	+	.	Name=Ear_height;B73v2_pos=3:227222822;1allele=A/C;version=Hapmap2;RS=rs824277311;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	233002750	233002849	.	+	.	Name=Ear_height;B73v2_pos=3:227223107;1allele=G/A;version=Hapmap2;RS=rs820120976;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	233002750	233002849	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:227223107;1allele=G/A;version=Hapmap2;RS=rs820120976;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	233142119	233142218	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:227356481;1allele=C/T;version=Hapmap2;RS=rs847006707;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	233142119	233142218	.	+	.	Name=Ear_height;B73v2_pos=3:227356481;1allele=C/T;version=Hapmap2;RS=rs847006707;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	233223532	233223631	.	+	.	Name=Ear_height;B73v2_pos=3:227439000;1allele=G/C;version=Hapmap2;RS=rs129430279;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	233240416	233240515	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:227455886;1allele=A/G;version=Hapmap2;RS=rs820603383;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	233309868	233309967	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:227525345;1allele=A/C;version=Hapmap2;RS=rs819677196;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	233543801	233543900	.	+	.	Name=Ear_height;B73v2_pos=3:227763171;1allele=G/C;version=Hapmap2;RS=rs821479546;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	233657609	233657708	.	+	.	Name=Tassel_length;B73v2_pos=3:227870034;1allele=C/T;version=Hapmap2;RS=rs129477580;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	233867959	233868058	.	+	.	Name=Tassel_length;B73v2_pos=3:228084198;1allele=A/G;version=Hapmap2;RS=rs807364217;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	234196541	234196640	.	+	.	Name=Tassel_length;B73v2_pos=3:228402637;1allele=T/C;version=Hapmap2;RS=rs839392177;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	234199306	234199405	.	+	.	Name=Tassel_length;B73v2_pos=3:228405405;1allele=A/G;version=Hapmap2;RS=rs831267858;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	234237279	234237378	.	+	.	Name=Tassel_length;B73v2_pos=3:228440670;1allele=A/G;version=Hapmap2;RS=rs839858563;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	234249634	234249733	.	+	.	Name=Cob_diameter;B73v2_pos=3:228453027;1allele=C/T;version=Hapmap2;RS=rs845737512;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	234669233	234669332	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:228880648;1allele=A/G;version=Hapmap1;RS=rs129400496;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	235014602	235014701	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:229238651;1allele=C/T;version=Hapmap2;RS=rs277305211;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	235088569	235088668	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:229309072;1allele=A/T;version=Hapmap2;RS=rs815215318;2ref_allele=A;3alt_allele=T
chr3	Wallace_2014	SNP	235163794	235163893	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:229384833;1allele=G/C;version=Hapmap1;RS=rs132122951;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	235326199	235326298	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:229532122;1allele=C/T;version=Hapmap2;RS=rs836434770;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	235357317	235357416	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:229569199;1allele=G/A;version=Hapmap2;RS=rs129424538;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	235364630	235364729	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:229576511;1allele=T/G;version=Hapmap2;RS=rs812339772;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	235368084	235368183	.	+	.	Name=Tassel_length;B73v2_pos=3:229579901;1allele=C/T;version=Hapmap2;RS=rs831027046;2ref_allele=C;3alt_allele=T
chr3	Wallace_2014	SNP	235486719	235486818	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:229646664;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	235595817	235595916	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:229811287;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	235610958	235611057	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:229826434;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	235658854	235658953	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:229866477;1allele=T/C;version=Hapmap1;RS=rs129355227;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	235661344	235661443	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:229868967;1allele=T/C;version=Hapmap2;RS=rs277306427;2ref_allele=T;3alt_allele=C
chr3	Wallace_2014	SNP	235956387	235956486	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:230205286;1allele=T/A;version=Hapmap2;RS=rs840670390;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	235956387	235956486	.	+	.	Name=Ear_height;B73v2_pos=3:230205286;1allele=T/A;version=Hapmap2;RS=rs840670390;2ref_allele=T;3alt_allele=A
chr3	Wallace_2014	SNP	235959440	235959539	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:230208339;1allele=A/G;version=Hapmap2;RS=rs1063686332;2ref_allele=G;3alt_allele=A
chr3	Wallace_2014	SNP	236198518	236198617	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:230448534;1allele=G/C;version=Hapmap2;RS=rs849569787;2ref_allele=G;3alt_allele=C
chr3	Wallace_2014	SNP	236280764	236280863	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:230529515;1allele=A/G;version=Hapmap2;RS=rs835427116;2ref_allele=A;3alt_allele=G
chr3	Wallace_2014	SNP	236489866	236489965	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:232026485;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	236496536	236496635	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:232019816;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	236515339	236515438	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:232000993;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	236530962	236531061	.	+	.	Name=Tassel_length;B73v2_pos=3:231985370;1allele=A/G;version=Hapmap2;RS=rs1062044792;2ref_allele=C;3alt_allele=A
chr3	Wallace_2014	SNP	236534498	236534597	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:231981835;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	236663436	236663535	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:231899847;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr3	Wallace_2014	SNP	236793242	236793341	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:230623398;1allele=A/C;version=Hapmap2;RS=rs849290903;2ref_allele=A;3alt_allele=C
chr3	Wallace_2014	SNP	236833553	236833652	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:230663707;1allele=T/G;version=Hapmap2;RS=rs820159888;2ref_allele=T;3alt_allele=G
chr3	Wallace_2014	SNP	237407389	237407488	.	+	.	Name=Tassel_length;B73v2_pos=3:231245218;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	934024	934123	.	+	.	Name=Stalk_strength;B73v2_pos=4:421696;1allele=A/T;version=Hapmap2;RS=rs849053820;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	1128512	1128611	.	+	.	Name=Ear_row_number;B73v2_pos=4:598153;1allele=T/A;version=Hapmap2;RS=rs811126822;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	1131517	1131616	.	+	.	Name=Ear_row_number;B73v2_pos=4:601158;1allele=G/A;version=Hapmap2;RS=rs813782051;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	1288875	1288974	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:769328;1allele=G/A;version=Hapmap2;RS=rs277310085;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	1356731	1356830	.	+	.	Name=Total_amino_acids;B73v2_pos=4:837364;1allele=C/G;version=Hapmap1;RS=rs131421638;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	1588375	1588474	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1075937;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	1756402	1756501	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1182845;1allele=G/A;version=Hapmap2;RS=rs844299349;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	1776244	1776343	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:1218040;1allele=A/C;version=Hapmap2;RS=rs812265186;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	1824231	1824330	.	+	.	Name=Stalk_strength;B73v2_pos=4:1251294;1allele=C/T;version=Hapmap2;RS=rs810997043;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	1824513	1824612	.	+	.	Name=Leaf_width;B73v2_pos=4:1251576;1allele=G/C;version=Hapmap2;RS=rs821021773;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	1825770	1825869	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1252833;1allele=A/T;version=Hapmap2;RS=rs815284117;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	2025302	2025401	.	+	.	Name=Total_amino_acids;B73v2_pos=4:1465321;1allele=G/A;version=Hapmap2;RS=rs848880639;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	2070914	2071013	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1510061;1allele=A/G;version=Hapmap2;RS=rs838087527;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	2734397	2734496	.	+	.	Name=Stalk_strength;B73v2_pos=4:1878510;1allele=G/A;version=Hapmap2;RS=rs277310681;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	2740430	2740529	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1884542;1allele=A/G;version=Hapmap1;RS=rs131422290;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	2740890	2740989	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1885002;1allele=C/T;version=Hapmap2;RS=rs811714357;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	2794230	2794329	.	+	.	Name=Ear_row_number;B73v2_pos=4:1911233;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	2838224	2838323	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1978826;1allele=C/T;version=Hapmap2;RS=rs846983726;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	2842617	2842716	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1983219;1allele=G/T;version=Hapmap1;RS=rs131422419;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	2842918	2843017	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:1983520;1allele=T/G;version=Hapmap2;RS=rs131422422;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	2879234	2879333	.	+	.	Name=Total_amino_acids;B73v2_pos=4:2018607;1allele=G/A;version=Hapmap2;RS=rs843532103;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	2893729	2893828	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2032831;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	2897848	2897947	.	+	.	Name=Ear_row_number;B73v2_pos=4:2036950;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	2907767	2907866	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2046869;1allele=T/A;version=Hapmap2;RS=rs824282698;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	2950567	2950666	.	+	.	Name=Ear_row_number;B73v2_pos=4:2088909;1allele=G/T;version=Hapmap2;RS=rs1064284003;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	2977866	2977965	.	+	.	Name=Ear_row_number;B73v2_pos=4:2116930;1allele=G/T;version=Hapmap2;RS=rs129617839;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	2978725	2978824	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2117789;1allele=C/T;version=Hapmap1;RS=rs129617848;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	3047748	3047847	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2182722;1allele=C/T;version=Hapmap2;RS=rs277311056;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	3051199	3051298	.	+	.	Name=Ear_row_number;B73v2_pos=4:2186173;1allele=C/T;version=Hapmap2;RS=rs817042833;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	3051269	3051368	.	+	.	Name=Ear_row_number;B73v2_pos=4:2186243;1allele=A/C;version=Hapmap2;RS=rs277311085;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	3189465	3189564	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:2332267;1allele=C/T;version=Hapmap1;RS=rs129617990;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	3237069	3237168	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:2381944;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	3300518	3300617	.	+	.	Name=Ear_row_number;B73v2_pos=4:2445573;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	3333275	3333374	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2481412;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	3333592	3333691	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2481729;1allele=G/A;version=Hapmap1;RS=rs131423103;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3341857	3341956	.	+	.	Name=Ear_row_number;B73v2_pos=4:2489994;1allele=T/C;version=Hapmap2;RS=rs841423972;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	3363777	3363876	.	+	.	Name=Ear_row_number;B73v2_pos=4:2514200;1allele=T/C;version=Hapmap1;RS=rs131423253;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	3368732	3368831	.	+	.	Name=Leaf_length;B73v2_pos=4:2519155;1allele=G/A;version=Hapmap1;RS=rs129618303;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3408571	3408670	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2557983;1allele=T/G;version=Hapmap2;RS=rs827044809;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	3441154	3441253	.	+	.	Name=Ear_row_number;B73v2_pos=4:2590572;1allele=C/T;version=Hapmap2;RS=rs828102306;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	3443650	3443749	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2593068;1allele=C/T;version=Hapmap2;RS=rs833220546;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	3472458	3472557	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2622423;1allele=A/G;version=Hapmap2;RS=rs841591171;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	3522564	3522663	.	+	.	Name=Total_amino_acids;B73v2_pos=4:2672833;1allele=C/T;version=Hapmap2;RS=rs844621605;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	3532519	3532618	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:2682789;1allele=G/A;version=Hapmap2;RS=rs835357651;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3620780	3620879	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2761441;1allele=A/G;version=Hapmap2;RS=rs815866889;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3622984	3623083	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2763644;1allele=G/A;version=Hapmap1;RS=rs131423747;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3626055	3626154	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:2766715;1allele=G/T;version=Hapmap2;RS=rs843613182;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	3630272	3630371	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2770932;1allele=G/T;version=Hapmap1;RS=rs131423819;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	3630911	3631010	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2771571;1allele=T/C;version=Hapmap1;RS=rs131423839;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	3671639	3671738	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:2818341;1allele=G/A;version=Hapmap2;RS=rs834215901;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3705179	3705278	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:2851961;1allele=C/T;version=Hapmap2;RS=rs832717598;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	3705437	3705536	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:2852219;1allele=C/A;version=Hapmap1;RS=rs131423966;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	3705627	3705726	.	+	.	Name=Leaf_length;B73v2_pos=4:2852409;1allele=A/T;version=Hapmap1;RS=rs131423972;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	3707885	3707984	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2854667;1allele=T/G;version=Hapmap2;RS=rs129619019;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	3714556	3714655	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:2861338;1allele=T/C;version=Hapmap2;RS=rs804057121;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	3741588	3741687	.	+	.	Name=Leaf_length;B73v2_pos=4:2888238;1allele=T/C;version=Hapmap1;RS=rs131186914;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	3741957	3742056	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2888607;1allele=G/A;version=Hapmap2;RS=rs129619173;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3775094	3775193	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:2923644;1allele=A/G;version=Hapmap2;RS=rs1064210740;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	3793129	3793228	.	+	.	Name=Leaf_length;B73v2_pos=4:2941633;1allele=G/A;version=Hapmap2;RS=rs840052198;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	3833063	3833162	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:2981684;1allele=A/G;version=Hapmap2;RS=rs844086485;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	3868251	3868350	.	+	.	Name=Leaf_length;B73v2_pos=4:3024612;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	3870474	3870573	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:3026835;1allele=C/G;version=Hapmap2;RS=rs816382450;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	3924377	3924476	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:3085264;1allele=G/C;version=Hapmap2;RS=rs277312883;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	3951320	3951419	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:3112210;1allele=A/G;version=Hapmap2;RS=rs823947016;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	3951334	3951433	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:3112224;1allele=G/T;version=Hapmap2;RS=rs830880113;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	4423984	4424083	.	+	.	Name=Days_to_silk;B73v2_pos=4:3455609;1allele=A/G;version=Hapmap2;RS=rs815764035;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	4435325	4435424	.	+	.	Name=Ear_row_number;B73v2_pos=4:3466950;1allele=A/G;version=Hapmap1;RS=rs131424779;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	4453992	4454091	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:3474659;1allele=T/C;version=Hapmap2;RS=rs727032506;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	4496737	4496836	.	+	.	Name=Leaf_length;B73v2_pos=4:3517244;1allele=A/G;version=Hapmap2;RS=rs1061712002;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	4557621	4557720	.	+	.	Name=Leaf_length;B73v2_pos=4:3578877;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	4559597	4559696	.	+	.	Name=Leaf_length;B73v2_pos=4:3580853;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	4561864	4561963	.	+	.	Name=Leaf_length;B73v2_pos=4:3583120;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	4563790	4563889	.	+	.	Name=Leaf_length;B73v2_pos=4:3585046;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	4567831	4567930	.	+	.	Name=Leaf_length;B73v2_pos=4:3587903;1allele=G/A;version=Hapmap2;RS=rs804111294;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	4569221	4569320	.	+	.	Name=Leaf_length;B73v2_pos=4:3588667;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	4569622	4569721	.	+	.	Name=Leaf_length;B73v2_pos=4:3589068;1allele=T/C;version=Hapmap1;RS=rs131424979;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	4572262	4572361	.	+	.	Name=Leaf_length;B73v2_pos=4:3591574;1allele=G/C;version=Hapmap1;RS=rs129620873;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	4573348	4573447	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:3592660;1allele=A/G;version=Hapmap2;RS=rs839249047;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	4581821	4581920	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:3601133;1allele=C/T;version=Hapmap2;RS=rs131425062;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	4736396	4736495	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:3757478;1allele=-/+;version=Hapmap2;RS=rs822492758;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	4862743	4862842	.	+	.	Name=Ear_row_number;B73v2_pos=4:3886926;1allele=T/A;version=Hapmap2;RS=rs131425299;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	4864729	4864828	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:3888912;1allele=CAC/;version=Hapmap1;RS=rs811792666;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	5041853	5041952	.	+	.	Name=Tassel_length;B73v2_pos=4:4065253;1allele=T/C;version=Hapmap2;RS=rs129621262;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	5460794	5460893	.	+	.	Name=Leaf_length;B73v2_pos=4:4393701;1allele=G/A;version=Hapmap2;RS=rs1061816578;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	5470667	5470766	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:4403576;1allele=C/T;version=Hapmap2;RS=rs277315035;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	5472857	5472956	.	+	.	Name=Leaf_length;B73v2_pos=4:4405766;1allele=T/G;version=Hapmap2;RS=rs131426475;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	5473247	5473346	.	+	.	Name=Leaf_length;B73v2_pos=4:4406156;1allele=G/A;version=Hapmap2;RS=rs1061231220;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	5623839	5623938	.	+	.	Name=Ear_row_number;B73v2_pos=4:4599713;1allele=T/C;version=Hapmap2;RS=rs834022082;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	5625841	5625940	.	+	.	Name=Ear_row_number;B73v2_pos=4:4601715;1allele=/TC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	5700551	5700650	.	+	.	Name=Ear_row_number;B73v2_pos=4:4684567;1allele=A/C;version=Hapmap2;RS=rs129622861;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	5700557	5700656	.	+	.	Name=Ear_row_number;B73v2_pos=4:4684573;1allele=G/A;version=Hapmap2;RS=rs129622862;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	5704124	5704223	.	+	.	Name=Ear_row_number;B73v2_pos=4:4688140;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	5768223	5768322	.	+	.	Name=Ear_row_number;B73v2_pos=4:4735082;1allele=A/C;version=Hapmap2;RS=rs277315499;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	5785950	5786049	.	+	.	Name=Ear_row_number;B73v2_pos=4:4752810;1allele=G/A;version=Hapmap1;RS=rs129623422;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	5788361	5788460	.	+	.	Name=Plant_height;B73v2_pos=4:4755221;1allele=A/C;version=Hapmap2;RS=rs277315622;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	5789484	5789583	.	+	.	Name=Ear_row_number;B73v2_pos=4:4756344;1allele=C/A;version=Hapmap2;RS=rs825483278;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	5797769	5797868	.	+	.	Name=Ear_row_number;B73v2_pos=4:4764632;1allele=T/C;version=Hapmap2;RS=rs1062631321;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	5798269	5798368	.	+	.	Name=Ear_row_number;B73v2_pos=4:4765132;1allele=G/C;version=Hapmap2;RS=rs811969489;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	5870326	5870425	.	+	.	Name=Ear_row_number;B73v2_pos=4:4837191;1allele=T/C;version=Hapmap2;RS=rs835899686;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	5885774	5885873	.	+	.	Name=Ear_row_number;B73v2_pos=4:4852644;1allele=A/T;version=Hapmap2;RS=rs277316012;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	5888623	5888722	.	+	.	Name=Ear_height;B73v2_pos=4:4855493;1allele=T/C;version=Hapmap1;RS=rs131427112;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	5898585	5898684	.	+	.	Name=Ear_height;B73v2_pos=4:4865454;1allele=G/A;version=Hapmap2;RS=rs818870134;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	5899799	5899898	.	+	.	Name=Ear_height;B73v2_pos=4:4866668;1allele=G/C;version=Hapmap2;RS=rs830478343;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	5912139	5912238	.	+	.	Name=Nitrate;B73v2_pos=4:4879009;1allele=A/G;version=Hapmap2;RS=rs819946405;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	5931133	5931232	.	+	.	Name=Ear_row_number;B73v2_pos=4:4902470;1allele=G/A;version=Hapmap2;RS=rs277316268;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	5934772	5934871	.	+	.	Name=Ear_row_number;B73v2_pos=4:4906109;1allele=G/T;version=Hapmap2;RS=rs834770115;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	5938884	5938983	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:4910217;1allele=A/G;version=Hapmap2;RS=rs802464477;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	5939889	5939988	.	+	.	Name=Ear_row_number;B73v2_pos=4:4911222;1allele=C/G;version=Hapmap2;RS=rs806605226;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	5979849	5979948	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:4978315;1allele=C/T;version=Hapmap2;RS=rs803620686;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	5985280	5985379	.	+	.	Name=Tassel_length;B73v2_pos=4:4983746;1allele=G/T;version=Hapmap2;RS=rs129624351;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	5986459	5986558	.	+	.	Name=Leaf_length;B73v2_pos=4:4984926;1allele=A/C;version=Hapmap2;RS=rs129624370;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	5998299	5998398	.	+	.	Name=Tassel_length;B73v2_pos=4:4996767;1allele=G/T;version=Hapmap2;RS=rs277316455;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	6002311	6002410	.	+	.	Name=Tassel_length;B73v2_pos=4:5000779;1allele=C/G;version=Hapmap2;RS=rs277316492;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	6005112	6005211	.	+	.	Name=Ear_row_number;B73v2_pos=4:5003580;1allele=C/A;version=Hapmap2;RS=rs129624520;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	6007396	6007495	.	+	.	Name=Tassel_length;B73v2_pos=4:5005864;1allele=T/C;version=Hapmap1;RS=rs131427347;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6010906	6011005	.	+	.	Name=Ear_row_number;B73v2_pos=4:5009375;1allele=A/G;version=Hapmap2;RS=rs725478030;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	6016251	6016350	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:5014720;1allele=A/T;version=Hapmap2;RS=rs824890569;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	6016265	6016364	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:5014734;1allele=T/C;version=Hapmap2;RS=rs827514698;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6016573	6016672	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:5015042;1allele=T/C;version=Hapmap2;RS=rs807640755;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6016573	6016672	.	+	.	Name=Plant_height;B73v2_pos=4:5015042;1allele=T/C;version=Hapmap2;RS=rs807640755;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6016969	6017068	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:5015438;1allele=T/C;version=Hapmap2;RS=rs829771447;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6069705	6069804	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5068096;1allele=G/A;version=Hapmap2;RS=rs816571922;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	6077490	6077589	.	+	.	Name=Ear_row_number;B73v2_pos=4:5075881;1allele=T/G;version=Hapmap2;RS=rs724889706;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	6120931	6121030	.	+	.	Name=Plant_height;B73v2_pos=4:5119278;1allele=T/G;version=Hapmap1;RS=rs131427645;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	6121376	6121475	.	+	.	Name=Plant_height;B73v2_pos=4:5119723;1allele=G/C;version=Hapmap2;RS=rs129624886;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	6140642	6140741	.	+	.	Name=Plant_height;B73v2_pos=4:5138988;1allele=T/A;version=Hapmap2;RS=rs726673321;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	6210584	6210683	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5193470;1allele=G/A;version=Hapmap2;RS=rs816144675;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	6212380	6212479	.	+	.	Name=Ear_height;B73v2_pos=4:5195245;1allele=C/T;version=Hapmap2;RS=rs830053493;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	6213015	6213114	.	+	.	Name=Ear_height;B73v2_pos=4:5195880;1allele=G/A;version=Hapmap2;RS=rs129625131;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	6213142	6213241	.	+	.	Name=Plant_height;B73v2_pos=4:5196007;1allele=C/T;version=Hapmap2;RS=rs277316804;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6213347	6213446	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5196212;1allele=C/T;version=Hapmap2;RS=rs841866906;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	6213608	6213707	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:5196473;1allele=G/A;version=Hapmap2;RS=rs848111405;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	6213615	6213714	.	+	.	Name=Ear_height;B73v2_pos=4:5196480;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	6213615	6213714	.	+	.	Name=Plant_height;B73v2_pos=4:5196480;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	6213639	6213738	.	+	.	Name=Plant_height;B73v2_pos=4:5196504;1allele=A/G;version=Hapmap2;RS=rs838276162;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	6213644	6213743	.	+	.	Name=Ear_height;B73v2_pos=4:5196509;1allele=A/C;version=Hapmap2;RS=rs820929348;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	6217894	6217993	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5200759;1allele=C/T;version=Hapmap2;RS=rs849346182;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	6237208	6237307	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5222059;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	6251064	6251163	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5233578;1allele=C/A;version=Hapmap2;RS=rs847251264;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	6277501	6277600	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5260012;1allele=C/T;version=Hapmap2;RS=rs277317022;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	6281222	6281321	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:5263733;1allele=G/A;version=Hapmap2;RS=rs277317031;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	6283060	6283159	.	+	.	Name=Plant_height;B73v2_pos=4:5265570;1allele=T/A;version=Hapmap2;RS=rs277317037;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	6284058	6284157	.	+	.	Name=Tassel_length;B73v2_pos=4:5266568;1allele=C/T;version=Hapmap2;RS=rs129625381;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6286442	6286541	.	+	.	Name=Ear_row_number;B73v2_pos=4:5268951;1allele=/TCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	6286539	6286638	.	+	.	Name=Ear_row_number;B73v2_pos=4:5269048;1allele=C/G;version=Hapmap2;RS=rs822521776;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	6373769	6373868	.	+	.	Name=Ear_row_number;B73v2_pos=4:5369939;1allele=G/A;version=Hapmap2;RS=rs830731828;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	6374582	6374681	.	+	.	Name=Ear_row_number;B73v2_pos=4:5370752;1allele=C/T;version=Hapmap2;RS=rs843871926;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	6380018	6380117	.	+	.	Name=Ear_row_number;B73v2_pos=4:5376188;1allele=G/A;version=Hapmap2;RS=rs833008237;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	6382372	6382471	.	+	.	Name=Leaf_length;B73v2_pos=4:5378542;1allele=T/A;version=Hapmap2;RS=rs129625505;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	6415879	6415978	.	+	.	Name=Ear_row_number;B73v2_pos=4:5403771;1allele=C/G;version=Hapmap2;RS=rs131428094;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	6470101	6470200	.	+	.	Name=Ear_row_number;B73v2_pos=4:5457536;1allele=G/A;version=Hapmap2;RS=rs277317397;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	6481234	6481333	.	+	.	Name=Plant_height;B73v2_pos=4:5468669;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	6511751	6511850	.	+	.	Name=Plant_height;B73v2_pos=4:5490925;1allele=C/T;version=Hapmap2;RS=rs129625955;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6524572	6524671	.	+	.	Name=Ear_row_number;B73v2_pos=4:5503744;1allele=T/A;version=Hapmap1;RS=rs131428389;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	6661563	6661662	.	+	.	Name=Ear_row_number;B73v2_pos=4:5640952;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	7002030	7002129	.	+	.	Name=Ear_row_number;B73v2_pos=4:5976338;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	7005839	7005938	.	+	.	Name=Total_amino_acids;B73v2_pos=4:5979618;1allele=C/A;version=Hapmap2;RS=rs839728611;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	7459798	7459897	.	+	.	Name=Tassel_length;B73v2_pos=4:6425606;1allele=A/G;version=Hapmap2;RS=rs834649739;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	7464683	7464782	.	+	.	Name=Tassel_length;B73v2_pos=4:6430491;1allele=A/G;version=Hapmap2;RS=rs129628805;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	7482269	7482368	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:6448077;1allele=G/A;version=Hapmap2;RS=rs807420077;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	7518423	7518522	.	+	.	Name=Ear_height;B73v2_pos=4:6484232;1allele=T/G;version=Hapmap2;RS=rs840358118;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	7520313	7520412	.	+	.	Name=Ear_height;B73v2_pos=4:6486123;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	7520922	7521021	.	+	.	Name=Ear_height;B73v2_pos=4:6486732;1allele=CGAT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	7583170	7583269	.	+	.	Name=Tassel_length;B73v2_pos=4:6550625;1allele=/GTGTAG;version=Hapmap1;RS=rs843261416;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	7704281	7704380	.	+	.	Name=Tassel_length;B73v2_pos=4:6669582;1allele=T/C;version=Hapmap2;RS=rs1061125369;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	7791786	7791885	.	+	.	Name=Ear_height;B73v2_pos=4:6766101;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	7793623	7793722	.	+	.	Name=Tassel_length;B73v2_pos=4:6764264;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	7825099	7825198	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:23836254;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	7876438	7876537	.	+	.	Name=Tassel_length;B73v2_pos=4:6856135;1allele=G/C;version=Hapmap2;RS=rs843308400;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	7967097	7967196	.	+	.	Name=Ear_height;B73v2_pos=4:6946826;1allele=G/A;version=Hapmap2;RS=rs846631956;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	8018086	8018185	.	+	.	Name=Ear_row_number;B73v2_pos=4:6998474;1allele=G/T;version=Hapmap2;RS=rs824001764;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	8027536	8027635	.	+	.	Name=Nitrate;B73v2_pos=4:7007924;1allele=C/T;version=Hapmap2;RS=rs724658905;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	8051630	8051729	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:7031924;1allele=A/T;version=Hapmap2;RS=rs813672832;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	8052020	8052119	.	+	.	Name=Ear_height;B73v2_pos=4:7032314;1allele=T/A;version=Hapmap2;RS=rs277320470;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	8052205	8052304	.	+	.	Name=Ear_height;B73v2_pos=4:7032499;1allele=A/G;version=Hapmap2;RS=rs277320475;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	8057254	8057353	.	+	.	Name=Ear_height;B73v2_pos=4:7037548;1allele=A/G;version=Hapmap2;RS=rs850405360;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	8064323	8064422	.	+	.	Name=Ear_height;B73v2_pos=4:7044617;1allele=A/T;version=Hapmap2;RS=rs277320525;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	8087373	8087472	.	+	.	Name=Ear_height;B73v2_pos=4:7067668;1allele=A/G;version=Hapmap2;RS=rs277320712;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	8179756	8179855	.	+	.	Name=Ear_row_number;B73v2_pos=4:7159133;1allele=T/G;version=Hapmap2;RS=rs818113137;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	8199630	8199729	.	+	.	Name=Cob_diameter;B73v2_pos=4:7172924;1allele=C/T;version=Hapmap2;RS=rs277321486;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	8470977	8471076	.	+	.	Name=Tassel_length;B73v2_pos=4:7448334;1allele=C/A;version=Hapmap2;RS=rs131430187;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	8471078	8471177	.	+	.	Name=Tassel_length;B73v2_pos=4:7448435;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	8504386	8504485	.	+	.	Name=Tassel_length;B73v2_pos=4:7481747;1allele=A/G;version=Hapmap2;RS=rs820685819;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	8504558	8504657	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:7481919;1allele=G/C;version=Hapmap2;RS=rs129631269;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	8510511	8510610	.	+	.	Name=Ear_height;B73v2_pos=4:7487873;1allele=A/G;version=Hapmap2;RS=rs1060729056;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	8897794	8897893	.	+	.	Name=Tassel_length;B73v2_pos=4:7870425;1allele=A/C;version=Hapmap2;RS=rs836448390;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	9983291	9983390	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:8950450;1allele=C/T;version=Hapmap2;RS=rs726277451;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	10945722	10945821	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:9898277;1allele=G/A;version=Hapmap2;RS=rs838612091;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	10991414	10991513	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:9944138;1allele=A/G;version=Hapmap2;RS=rs277324817;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	11011538	11011637	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:9964262;1allele=C/T;version=Hapmap2;RS=rs277324954;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	11073500	11073599	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:10027320;1allele=A/G;version=Hapmap2;RS=rs811792337;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	11074489	11074588	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:10028309;1allele=T/C;version=Hapmap2;RS=rs129634099;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	11117331	11117430	.	+	.	Name=Plant_height;B73v2_pos=4:10070602;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	11273133	11273232	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:10220481;1allele=T/C;version=Hapmap1;RS=rs131431523;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	11274598	11274697	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:10221946;1allele=A/G;version=Hapmap2;RS=rs131431575;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	11282108	11282207	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:10229456;1allele=A/G;version=Hapmap2;RS=rs277325797;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	11288850	11288949	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:10236199;1allele=A/G;version=Hapmap2;RS=rs129634697;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	11541011	11541110	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:10479696;1allele=C/T;version=Hapmap1;RS=rs129634949;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	11546512	11546611	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:10485197;1allele=G/A;version=Hapmap1;RS=rs131431848;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	11568848	11568947	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:10504579;1allele=A/T;version=Hapmap2;RS=rs129635108;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	11665597	11665696	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:10599982;1allele=T/C;version=Hapmap2;RS=rs277326333;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	11668476	11668575	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:10602861;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	11680711	11680810	.	+	.	Name=Ear_height;B73v2_pos=4:10615094;1allele=G/A;version=Hapmap2;RS=rs277326405;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	11704098	11704197	.	+	.	Name=Stalk_strength;B73v2_pos=4:10640940;1allele=G/A;version=Hapmap2;RS=rs129635419;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	12039490	12039589	.	+	.	Name=Plant_height;B73v2_pos=4:10975634;1allele=G/A;version=Hapmap2;RS=rs849650470;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	12094756	12094855	.	+	.	Name=Nitrate;B73v2_pos=4:11074791;1allele=A/G;version=Hapmap2;RS=rs823789370;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	12200118	12200217	.	+	.	Name=Nitrate;B73v2_pos=4:11157890;1allele=C/T;version=Hapmap2;RS=rs818997873;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	12314224	12314323	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:11260817;1allele=C/T;version=Hapmap2;RS=rs819538687;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	12432576	12432675	.	+	.	Name=Plant_height;B73v2_pos=4:11331467;1allele=A/G;version=Hapmap2;RS=rs129636877;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	12458582	12458681	.	+	.	Name=Plant_height;B73v2_pos=4:11357387;1allele=A/G;version=Hapmap2;RS=rs129636997;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	12664569	12664668	.	+	.	Name=Plant_height;B73v2_pos=4:11576825;1allele=G/A;version=Hapmap2;RS=rs277328430;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	12737764	12737863	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:11649397;1allele=/TTATTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	12778492	12778591	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:11717379;1allele=G/A;version=Hapmap2;RS=rs838877838;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	12978648	12978747	.	+	.	Name=Plant_height;B73v2_pos=4:11884968;1allele=T/G;version=Hapmap2;RS=rs129638325;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	13135352	13135451	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:12040657;1allele=G/A;version=Hapmap2;RS=rs129638452;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	13304626	13304725	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:12211021;1allele=T/C;version=Hapmap2;RS=rs277330206;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	13377213	13377312	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:12298271;1allele=-/+;version=Hapmap2;RS=rs129639078;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	13559686	13559785	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:12503076;1allele=T/C;version=Hapmap2;RS=rs824083109;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	13676900	13676999	.	+	.	Name=Days_to_silk;B73v2_pos=4:12610793;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	13835453	13835552	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:12776906;1allele=T/C;version=Hapmap2;RS=rs821726398;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	14044747	14044846	.	+	.	Name=Height_above_ear;B73v2_pos=4:12982586;1allele=A/G;version=Hapmap2;RS=rs129639938;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	14071299	14071398	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:13009746;1allele=G/A;version=Hapmap2;RS=rs1063485022;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	14120912	14121011	.	+	.	Name=Days_to_silk;B73v2_pos=4:13058378;1allele=G/A;version=Hapmap2;RS=rs844712551;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	14203618	14203717	.	+	.	Name=Plant_height;B73v2_pos=4:13140783;1allele=+/-;version=Hapmap2;RS=rs814872939;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	14207135	14207234	.	+	.	Name=Plant_height;B73v2_pos=4:13144300;1allele=A/G;version=Hapmap2;RS=rs129640368;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	14991333	14991432	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14031602;1allele=T/G;version=Hapmap2;RS=rs843595239;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	14993611	14993710	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14033880;1allele=T/A;version=Hapmap2;RS=rs129641621;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	14993817	14993916	.	+	.	Name=Plant_height;B73v2_pos=4:14034086;1allele=C/T;version=Hapmap2;RS=rs129641626;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	15142672	15142745	.	+	.	Name=Plant_height;B73v2_pos=4:14219663;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	15399791	15399890	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=1:282430343;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	15697329	15697428	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:14375731;1allele=G/A;version=Hapmap2;RS=rs828451633;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	15700483	15700582	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:14378885;1allele=A/T;version=Hapmap2;RS=rs277334242;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	15720805	15720904	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:14457033;1allele=C/T;version=Hapmap2;RS=rs846115315;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	15919730	15919829	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14575466;1allele=C/T;version=Hapmap2;RS=rs801967574;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	15936726	15936825	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14592472;1allele=A/T;version=Hapmap2;RS=rs129642513;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	16032781	16032880	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14691492;1allele=A/C;version=Hapmap1;RS=rs129642566;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	16063168	16063267	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14721948;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16080911	16081010	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14739689;1allele=C/T;version=Hapmap2;RS=rs1060703487;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	16158133	16158232	.	+	.	Name=Height_above_ear;B73v2_pos=4:14818498;1allele=C/T;version=Hapmap2;RS=rs828175240;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	16191046	16191145	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14851411;1allele=A/G;version=Hapmap2;RS=rs277335144;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	16197751	16197850	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:14858116;1allele=G/A;version=Hapmap2;RS=rs129643094;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	16230701	16230800	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:14892763;1allele=G/A;version=Hapmap2;RS=rs1061848101;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	16232152	16232251	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:14894214;1allele=G/A;version=Hapmap2;RS=rs827446691;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	16284779	16284878	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:14946773;1allele=G/A;version=Hapmap2;RS=rs129643233;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	16290343	16290442	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:14952337;1allele=T/A;version=Hapmap2;RS=rs1062765556;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	16290910	16291009	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:14952904;1allele=G/T;version=Hapmap2;RS=rs829265408;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	16295299	16295398	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:14957293;1allele=A/G;version=Hapmap2;RS=rs277335408;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	16299745	16299844	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:14977264;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16419974	16420073	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:15075802;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16529430	16529529	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:15203056;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16536227	16536326	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:15209853;1allele=G/A;version=Hapmap2;RS=rs803571696;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	16560500	16560599	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:15234126;1allele=T/A;version=Hapmap2;RS=rs802678555;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	16561389	16561488	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:15235015;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16651626	16651725	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:15299565;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16651838	16651937	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:15299353;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16735061	16735160	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:15410364;1allele=C/T;version=Hapmap2;RS=rs1062514258;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	16779552	16779650	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:15488321;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16899168	16899267	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:15595850;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	16938128	16938227	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:15610510;1allele=C/T;version=Hapmap1;RS=rs131435142;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	16999415	16999514	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:15668156;1allele=G/A;version=Hapmap2;RS=rs801558450;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	17016023	17016122	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:15684765;1allele=T/A;version=Hapmap2;RS=rs837713235;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	17019506	17019605	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:15688248;1allele=A/C;version=Hapmap2;RS=rs129644870;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	17029134	17029233	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:15697876;1allele=T/C;version=Hapmap2;RS=rs837114247;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	17036157	17036256	.	+	.	Name=Days_to_silk;B73v2_pos=4:15704899;1allele=G/T;version=Hapmap2;RS=rs828017338;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	17201259	17201358	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:15866202;1allele=C/T;version=Hapmap2;RS=rs835504050;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	17721356	17721455	.	+	.	Name=Days_to_silk;B73v2_pos=4:16022851;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	17797054	17797153	.	+	.	Name=Days_to_silk;B73v2_pos=4:16096206;1allele=C/T;version=Hapmap2;RS=rs131435422;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	17828954	17829053	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:16128108;1allele=C/T;version=Hapmap2;RS=rs277337139;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	17830866	17830965	.	+	.	Name=Days_to_silk;B73v2_pos=4:16130020;1allele=T/A;version=Hapmap2;RS=rs824768071;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	17831462	17831561	.	+	.	Name=Total_amino_acids;B73v2_pos=4:16130616;1allele=G/A;version=Hapmap2;RS=rs834560333;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	17868595	17868694	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:16166752;1allele=C/T;version=Hapmap2;RS=rs726929949;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	17910656	17910755	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:16209494;1allele=G/A;version=Hapmap2;RS=rs277337259;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	17913048	17913147	.	+	.	Name=Days_to_silk;B73v2_pos=4:16211886;1allele=A/G;version=Hapmap1;RS=rs131435486;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	18011245	18011344	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:16307780;1allele=C/A;version=Hapmap2;RS=rs129645936;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	18022016	18022115	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:16318551;1allele=T/C;version=Hapmap2;RS=rs837020520;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	18037758	18037857	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:16334296;1allele=T/C;version=Hapmap2;RS=rs826279590;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	18084746	18084845	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:16378718;1allele=T/C;version=Hapmap2;RS=rs816171804;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	18084832	18084931	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:16378804;1allele=T/C;version=Hapmap2;RS=rs277337647;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	18118182	18118281	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:16411514;1allele=T/C;version=Hapmap2;RS=rs129646301;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	18303310	18303409	.	+	.	Name=Days_to_silk;B73v2_pos=4:16608971;1allele=A/G;version=Hapmap2;RS=rs828811760;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	18507708	18507807	.	+	.	Name=Days_to_silk;B73v2_pos=4:16818143;1allele=G/A;version=Hapmap2;RS=rs836948113;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	18528574	18528673	.	+	.	Name=Days_to_silk;B73v2_pos=4:16839009;1allele=G/A;version=Hapmap2;RS=rs814857236;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	18535422	18535521	.	+	.	Name=Days_to_silk;B73v2_pos=4:16845857;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	18539529	18539628	.	+	.	Name=Days_to_silk;B73v2_pos=4:16849964;1allele=G/A;version=Hapmap2;RS=rs801581781;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	18541399	18541498	.	+	.	Name=Days_to_silk;B73v2_pos=4:16851834;1allele=T/G;version=Hapmap2;RS=rs834194287;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	18582718	18582817	.	+	.	Name=Days_to_silk;B73v2_pos=4:16893154;1allele=G/A;version=Hapmap2;RS=rs845680242;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	18618175	18618274	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:16928611;1allele=G/A;version=Hapmap2;RS=rs831671728;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	18838601	18838700	.	+	.	Name=Days_to_silk;B73v2_pos=4:17151970;1allele=G/C;version=Hapmap2;RS=rs805576618;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	19015572	19015671	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:17326801;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	19108974	19109073	.	+	.	Name=Days_to_silk;B73v2_pos=4:17410376;1allele=A/G;version=Hapmap2;RS=rs815376861;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	19446355	19446454	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17743049;1allele=C/G;version=Hapmap2;RS=rs819137772;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	19465323	19465422	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17762020;1allele=A/G;version=Hapmap2;RS=rs819219501;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	19465719	19465818	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17762416;1allele=G/T;version=Hapmap2;RS=rs846087059;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	19465774	19465873	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17762471;1allele=G/T;version=Hapmap2;RS=rs829552725;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	19466670	19466769	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17763367;1allele=T/C;version=Hapmap2;RS=rs840005797;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	19466688	19466787	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17763385;1allele=A/G;version=Hapmap2;RS=rs824247667;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	19474895	19474994	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17771592;1allele=A/G;version=Hapmap2;RS=rs822200500;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	19685075	19685174	.	+	.	Name=Days_to_silk;B73v2_pos=4:17978561;1allele=C/T;version=Hapmap2;RS=rs129650547;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	19686500	19686599	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:17979986;1allele=G/A;version=Hapmap2;RS=rs823697599;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	19688819	19688918	.	+	.	Name=Leaf_width;B73v2_pos=4:17982305;1allele=T/G;version=Hapmap2;RS=rs823615301;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	19796722	19796821	.	+	.	Name=Days_to_silk;B73v2_pos=4:18098102;1allele=C/T;version=Hapmap2;RS=rs813598192;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	19814571	19814670	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:18115961;1allele=T/C;version=Hapmap2;RS=rs129650736;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	19858448	19858547	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:18150745;1allele=T/C;version=Hapmap2;RS=rs805029155;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	19864134	19864233	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:18156431;1allele=C/T;version=Hapmap2;RS=rs804973287;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	20011501	20011600	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:18302144;1allele=A/C;version=Hapmap2;RS=rs812762833;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	20070476	20070575	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:18365113;1allele=G/A;version=Hapmap2;RS=rs807090321;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	20074464	20074563	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:18369101;1allele=G/C;version=Hapmap2;RS=rs277343338;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	20075067	20075166	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:18369704;1allele=T/C;version=Hapmap2;RS=rs844793216;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	20075354	20075453	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:18369991;1allele=A/G;version=Hapmap2;RS=rs844864674;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	20099795	20099894	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:18394438;1allele=G/C;version=Hapmap2;RS=rs129651195;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	20109327	20109426	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:18403972;1allele=G/A;version=Hapmap2;RS=rs804504898;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	20252118	20252217	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:18565354;1allele=T/A;version=Hapmap2;RS=rs842237402;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	20433722	20433821	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:20876539;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	20762185	20762284	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:19072045;1allele=C/T;version=Hapmap2;RS=rs822826777;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	20812252	20812351	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:19118994;1allele=T/C;version=Hapmap2;RS=rs809603351;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	20816674	20816773	.	+	.	Name=Ear_row_number;B73v2_pos=4:19123416;1allele=A/G;version=Hapmap2;RS=rs1063008826;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	20820409	20820508	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:19127151;1allele=C/G;version=Hapmap2;RS=rs277345410;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	20844723	20844822	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:19149933;1allele=C/A;version=Hapmap2;RS=rs131437790;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	20882203	20882302	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:19183119;1allele=A/G;version=Hapmap2;RS=rs277345553;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	21369856	21369955	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:19686243;1allele=C/T;version=Hapmap2;RS=rs827146973;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	21378424	21378523	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:19694812;1allele=C/A;version=Hapmap2;RS=rs838254250;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	21634481	21634580	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:19928021;1allele=A/G;version=Hapmap2;RS=rs812439588;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	21648810	21648909	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:19943857;1allele=C/T;version=Hapmap2;RS=rs803539863;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	21705474	21705573	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:20000904;1allele=T/A;version=Hapmap2;RS=rs814111102;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	21717939	21718038	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:20013195;1allele=A/T;version=Hapmap2;RS=rs839645612;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	21760600	21760699	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:20055857;1allele=G/A;version=Hapmap2;RS=rs277346913;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	21811007	21811106	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:20105391;1allele=G/A;version=Hapmap2;RS=rs277346986;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	21884689	21884788	.	+	.	Name=Cob_diameter;B73v2_pos=4:20176644;1allele=T/C;version=Hapmap1;RS=rs129654478;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	21997317	21997416	.	+	.	Name=Cob_diameter;B73v2_pos=4:20289738;1allele=G/A;version=Hapmap2;RS=rs849448583;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	22246159	22246258	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:20541587;1allele=C/T;version=Hapmap2;RS=rs817020847;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	22685334	22685433	.	+	.	Name=Cob_diameter;B73v2_pos=4:20969082;1allele=G/A;version=Hapmap2;RS=rs801471982;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	23063500	23063599	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:21357297;1allele=T/G;version=Hapmap2;RS=rs803424188;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	23063550	23063649	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:21357347;1allele=A/T;version=Hapmap2;RS=rs129656533;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	23064742	23064841	.	+	.	Name=Days_to_silk;B73v2_pos=4:21358539;1allele=G/A;version=Hapmap2;RS=rs809512413;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	23064742	23064841	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:21358539;1allele=G/A;version=Hapmap2;RS=rs809512413;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	23283630	23283729	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:21578336;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	23302656	23302755	.	+	.	Name=Plant_height;B73v2_pos=4:21597362;1allele=G/A;version=Hapmap2;RS=rs845597367;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	23358204	23358303	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:21656783;1allele=C/G;version=Hapmap2;RS=rs725089140;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	23361058	23361157	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:21659637;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	23370929	23371028	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:21669508;1allele=T/G;version=Hapmap2;RS=rs839781843;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	23374635	23374734	.	+	.	Name=Nitrate;B73v2_pos=4:21673214;1allele=G/C;version=Hapmap2;RS=rs824954591;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	23420269	23420368	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:21724556;1allele=T/C;version=Hapmap2;RS=rs822253424;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	23525485	23525584	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:21822833;1allele=A/T;version=Hapmap1;RS=rs131439117;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	23527101	23527200	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:21824449;1allele=G/T;version=Hapmap2;RS=rs823985946;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	23527909	23528008	.	+	.	Name=Days_to_silk;B73v2_pos=4:21825257;1allele=G/A;version=Hapmap2;RS=rs828139711;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	23527998	23528097	.	+	.	Name=Nitrate;B73v2_pos=4:21825346;1allele=C/T;version=Hapmap2;RS=rs809128440;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	23529171	23529270	.	+	.	Name=Nitrate;B73v2_pos=4:21826519;1allele=T/C;version=Hapmap2;RS=rs811859398;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	23555756	23555855	.	+	.	Name=Nitrate;B73v2_pos=4:21852369;1allele=C/T;version=Hapmap2;RS=rs801846312;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	23559549	23559648	.	+	.	Name=Nitrate;B73v2_pos=4:21856162;1allele=G/A;version=Hapmap2;RS=rs813826545;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	23578043	23578142	.	+	.	Name=Cob_diameter;B73v2_pos=4:21874656;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	23618040	23618139	.	+	.	Name=Leaf_length;B73v2_pos=4:21912954;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	23618278	23618377	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:21913192;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	23619368	23619467	.	+	.	Name=Nitrate;B73v2_pos=4:21914282;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	23622097	23622196	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:21917011;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	23760190	23760289	.	+	.	Name=Nitrate;B73v2_pos=4:22054249;1allele=C/T;version=Hapmap2;RS=rs816442953;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	23761373	23761472	.	+	.	Name=Height_above_ear;B73v2_pos=4:22055431;1allele=G/T;version=Hapmap2;RS=rs850084435;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	23856777	23856876	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:22145307;1allele=T/C;version=Hapmap2;RS=rs821925127;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	23862463	23862562	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:22150993;1allele=C/T;version=Hapmap2;RS=rs827062915;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	23913012	23913111	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:22201908;1allele=T/C;version=Hapmap2;RS=rs131439413;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	23918370	23918469	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:22207266;1allele=A/G;version=Hapmap2;RS=rs129657497;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	23923997	23924096	.	+	.	Name=Stalk_strength;B73v2_pos=4:22212893;1allele=G/T;version=Hapmap2;RS=rs803176509;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	23926051	23926150	.	+	.	Name=Cob_diameter;B73v2_pos=4:22214947;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	24076954	24077053	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:22363768;1allele=C/A;version=Hapmap2;RS=rs844836833;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	24076954	24077053	.	+	.	Name=Plant_height;B73v2_pos=4:22363768;1allele=C/A;version=Hapmap2;RS=rs844836833;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	24077094	24077193	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:22363908;1allele=C/T;version=Hapmap2;RS=rs827397314;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	24125030	24125129	.	+	.	Name=Nitrate;B73v2_pos=4:22418756;1allele=A/T;version=Hapmap2;RS=rs837281309;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	24131449	24131548	.	+	.	Name=Nitrate;B73v2_pos=4:22425175;1allele=A/T;version=Hapmap2;RS=rs831618252;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	24155117	24155216	.	+	.	Name=Cob_diameter;B73v2_pos=4:22492765;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	24207449	24207548	.	+	.	Name=Nitrate;B73v2_pos=4:22468445;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	24236420	24236519	.	+	.	Name=Nitrate;B73v2_pos=4:22525550;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	24384198	24384297	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:22669703;1allele=T/C;version=Hapmap2;RS=rs129658256;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	24741401	24741500	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:22784518;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	24741964	24742063	.	+	.	Name=Height_above_ear;B73v2_pos=4:22783955;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	24769738	24769837	.	+	.	Name=Nitrate;B73v2_pos=4:22907892;1allele=G/A;version=Hapmap2;RS=rs806778625;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	24839269	24839368	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:22958508;1allele=C/T;version=Hapmap2;RS=rs1064463876;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	25048620	25048719	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:23162843;1allele=T/C;version=Hapmap2;RS=rs129658877;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	25048620	25048719	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:23162843;1allele=T/C;version=Hapmap2;RS=rs129658877;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	25077517	25077616	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:23184006;1allele=G/T;version=Hapmap2;RS=rs277352091;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	25078491	25078590	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:23184980;1allele=T/A;version=Hapmap1;RS=rs835232051;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	25078491	25078590	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:23184980;1allele=T/A;version=Hapmap1;RS=rs835232051;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	25083176	25083275	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:23189665;1allele=A/G;version=Hapmap2;RS=rs825505554;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	25083176	25083275	.	+	.	Name=Plant_height;B73v2_pos=4:23189665;1allele=A/G;version=Hapmap2;RS=rs825505554;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	25083176	25083275	.	+	.	Name=Ear_height;B73v2_pos=4:23189665;1allele=A/G;version=Hapmap2;RS=rs825505554;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	25092659	25092758	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:23198561;1allele=A/G;version=Hapmap2;RS=rs129658991;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	25147726	25147825	.	+	.	Name=Nitrate;B73v2_pos=4:23253808;1allele=T/C;version=Hapmap2;RS=rs809283278;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	25395768	25395867	.	+	.	Name=Nitrate;B73v2_pos=4:23498421;1allele=G/A;version=Hapmap2;RS=rs810630501;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	25512654	25512753	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:23616059;1allele=C/T;version=Hapmap2;RS=rs129659399;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	25515891	25515990	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:23619296;1allele=A/G;version=Hapmap1;RS=rs131440378;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	25515891	25515990	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:23619296;1allele=A/G;version=Hapmap1;RS=rs131440378;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	25515891	25515990	.	+	.	Name=Plant_height;B73v2_pos=4:23619296;1allele=A/G;version=Hapmap1;RS=rs131440378;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	25515966	25516065	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:23619371;1allele=/GGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	25681638	25681737	.	+	.	Name=Tassel_length;B73v2_pos=4:23645411;1allele=C/G;version=Hapmap2;RS=rs277352882;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	25688821	25688920	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:23652595;1allele=G/T;version=Hapmap2;RS=rs814512065;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	25949095	25949194	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:23944506;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	25955940	25956039	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:23951571;1allele=G/A;version=Hapmap2;RS=rs129659751;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26073757	26073856	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24060704;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	26074524	26074623	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24061471;1allele=T/C;version=Hapmap2;RS=rs1064649282;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	26075102	26075201	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:24062049;1allele=C/T;version=Hapmap2;RS=rs815996628;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	26090452	26090551	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24077527;1allele=G/A;version=Hapmap2;RS=rs817877921;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26096543	26096642	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24081578;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	26149528	26149627	.	+	.	Name=Tassel_length;B73v2_pos=4:24137658;1allele=T/C;version=Hapmap2;RS=rs814767170;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	26150246	26150345	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:24138376;1allele=G/A;version=Hapmap2;RS=rs807908585;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26153315	26153414	.	+	.	Name=Tassel_length;B73v2_pos=4:24141445;1allele=G/A;version=Hapmap1;RS=rs131440650;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	26161184	26161283	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:24149315;1allele=G/A;version=Hapmap2;RS=rs832917172;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26198003	26198102	.	+	.	Name=Tassel_length;B73v2_pos=4:24185038;1allele=G/A;version=Hapmap2;RS=rs805910053;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26198894	26198993	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:24185930;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	26201114	26201213	.	+	.	Name=Tassel_length;B73v2_pos=4:24188150;1allele=T/C;version=Hapmap2;RS=rs724401696;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	26211990	26212089	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:24199130;1allele=C/T;version=Hapmap2;RS=rs835105352;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	26239244	26239343	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:24226391;1allele=A/C;version=Hapmap2;RS=rs1063228914;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	26428945	26429044	.	+	.	Name=Tassel_length;B73v2_pos=4:24423593;1allele=C/T;version=Hapmap2;RS=rs277354360;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	26439928	26440027	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:24434833;1allele=G/A;version=Hapmap2;RS=rs841439062;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26472368	26472467	.	+	.	Name=Height_above_ear;B73v2_pos=4:24459501;1allele=G/A;version=Hapmap2;RS=rs844446473;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	26485877	26485976	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:24473007;1allele=G/A;version=Hapmap2;RS=rs839074983;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26686952	26687051	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24689986;1allele=C/T;version=Hapmap2;RS=rs842553857;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	26721948	26722047	.	+	.	Name=Tassel_length;B73v2_pos=4:24725008;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	26856011	26856110	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24860626;1allele=C/T;version=Hapmap2;RS=rs129661645;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	26870084	26870183	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:24874699;1allele=A/G;version=Hapmap2;RS=rs809196352;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	26895646	26895745	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24899389;1allele=C/T;version=Hapmap2;RS=rs818608468;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	26895665	26895764	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24899408;1allele=G/A;version=Hapmap2;RS=rs277355306;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	26898490	26898589	.	+	.	Name=Tassel_length;B73v2_pos=4:24902233;1allele=T/A;version=Hapmap2;RS=rs839652728;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	26906606	26906705	.	+	.	Name=Tassel_length;B73v2_pos=4:24910349;1allele=G/A;version=Hapmap2;RS=rs277355389;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	26961686	26961785	.	+	.	Name=Cob_diameter;B73v2_pos=4:24965451;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	26965631	26965730	.	+	.	Name=Tassel_length;B73v2_pos=4:24969396;1allele=C/T;version=Hapmap2;RS=rs277355526;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	26965644	26965743	.	+	.	Name=Tassel_length;B73v2_pos=4:24969409;1allele=G/A;version=Hapmap2;RS=rs277355528;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	26967755	26967854	.	+	.	Name=Tassel_length;B73v2_pos=4:24971521;1allele=C/T;version=Hapmap2;RS=rs1061037245;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	26969362	26969461	.	+	.	Name=Tassel_length;B73v2_pos=4:24973128;1allele=T/C;version=Hapmap2;RS=rs1061167328;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	26970407	26970506	.	+	.	Name=Malate;B73v2_pos=4:24974173;1allele=A/G;version=Hapmap2;RS=rs840071597;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	26971506	26971605	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:24975272;1allele=G/C;version=Hapmap2;RS=rs131440847;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	27026518	27026617	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:25023128;1allele=G/A;version=Hapmap2;RS=rs277355797;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	27034906	27035005	.	+	.	Name=Cob_diameter;B73v2_pos=4:25031516;1allele=A/T;version=Hapmap2;RS=rs831470076;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	27195231	27195330	.	+	.	Name=Tassel_length;B73v2_pos=4:25183368;1allele=G/A;version=Hapmap2;RS=rs1064196800;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	27199076	27199175	.	+	.	Name=Tassel_length;B73v2_pos=4:25187251;1allele=T/C;version=Hapmap2;RS=rs1060920250;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	27199288	27199387	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:25187464;1allele=G/A;version=Hapmap2;RS=rs826946218;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	27209525	27209624	.	+	.	Name=Tassel_length;B73v2_pos=4:25197648;1allele=C/A;version=Hapmap2;RS=rs846587820;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	27225162	27225261	.	+	.	Name=Tassel_length;B73v2_pos=4:25210948;1allele=C/T;version=Hapmap2;RS=rs277356320;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	27325070	27325169	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:25316300;1allele=C/T;version=Hapmap2;RS=rs836140576;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	27361247	27361346	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:25352475;1allele=A/G;version=Hapmap2;RS=rs277356740;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	27364891	27364990	.	+	.	Name=Ear_height;B73v2_pos=4:25356119;1allele=G/A;version=Hapmap2;RS=rs807891772;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	27376295	27376394	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:25367523;1allele=T/G;version=Hapmap2;RS=rs727233373;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	27409833	27409932	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:25401066;1allele=G/T;version=Hapmap2;RS=rs821281977;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	27409833	27409932	.	+	.	Name=Plant_height;B73v2_pos=4:25401066;1allele=G/T;version=Hapmap2;RS=rs821281977;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	27468485	27468584	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:25459949;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	27468548	27468647	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:25460012;1allele=T/C;version=Hapmap2;RS=rs824936650;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	27510040	27510139	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:25502010;1allele=G/T;version=Hapmap2;RS=rs849043231;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	27510062	27510161	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:25502032;1allele=G/A;version=Hapmap2;RS=rs803760427;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	27740311	27740410	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:25743555;1allele=G/C;version=Hapmap1;RS=rs131441130;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	27787573	27787672	.	+	.	Name=Cob_diameter;B73v2_pos=4:25786971;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	27925066	27925165	.	+	.	Name=Tassel_length;B73v2_pos=4:25922167;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	27973258	27973357	.	+	.	Name=Tassel_length;B73v2_pos=4:25969177;1allele=T/A;version=Hapmap2;RS=rs129663181;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	27983328	27983427	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:25979247;1allele=G/A;version=Hapmap2;RS=rs830965180;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	27983345	27983444	.	+	.	Name=Tassel_length;B73v2_pos=4:25979264;1allele=G/A;version=Hapmap2;RS=rs820081209;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	27984095	27984194	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:25980014;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	27993906	27994005	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:25990408;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	28075383	28075482	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:26071931;1allele=T/A;version=Hapmap2;RS=rs831127185;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	28179671	28179770	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:26181303;1allele=T/A;version=Hapmap2;RS=rs131441412;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	28361098	28361197	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:26420848;1allele=G/A;version=Hapmap2;RS=rs812156268;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	28568004	28568103	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:26654220;1allele=A/G;version=Hapmap2;RS=rs131441817;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	28697900	28697999	.	+	.	Name=Nitrate;B73v2_pos=4:26750154;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	29947381	29947480	.	+	.	Name=Nitrate;B73v2_pos=4:28025446;1allele=A/T;version=Hapmap2;RS=rs837379810;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	30924641	30924740	.	+	.	Name=Glucose;B73v2_pos=4:28994171;1allele=T/C;version=Hapmap2;RS=rs829350378;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	30924697	30924796	.	+	.	Name=Glucose;B73v2_pos=4:28994227;1allele=G/A;version=Hapmap2;RS=rs129666448;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	30989625	30989724	.	+	.	Name=Fumarate;B73v2_pos=4:29056883;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	31052883	31052982	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:29120586;1allele=A/G;version=Hapmap2;RS=rs129666670;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	31137690	31137789	.	+	.	Name=Malate;B73v2_pos=4:29200277;1allele=C/T;version=Hapmap2;RS=rs277362239;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	31445745	31445844	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:29512539;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	32165205	32165304	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:30241178;1allele=G/A;version=Hapmap2;RS=rs826524416;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	32292234	32292333	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:30311299;1allele=C/T;version=Hapmap2;RS=rs839326453;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	32363509	32363608	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:30430030;1allele=G/A;version=Hapmap2;RS=rs828421060;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	32410671	32410770	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:30478340;1allele=A/G;version=Hapmap2;RS=rs847717651;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	32496823	32496922	.	+	.	Name=Glucose;B73v2_pos=4:30553458;1allele=A/T;version=Hapmap2;RS=rs821906239;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	32583107	32583206	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:30631605;1allele=C/T;version=Hapmap2;RS=rs842437289;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	32679531	32679630	.	+	.	Name=Malate;B73v2_pos=4:30727128;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	32741050	32741149	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:30787526;1allele=G/A;version=Hapmap2;RS=rs806894385;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	32790093	32790192	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:30951986;1allele=T/C;version=Hapmap2;RS=rs811603213;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	33141087	33141186	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:23109893;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	33355885	33355984	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:31390964;1allele=T/C;version=Hapmap2;RS=rs822075748;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	33595285	33595384	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:31610264;1allele=G/A;version=Hapmap2;RS=rs843777134;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	33668860	33668959	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:31713316;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	33816277	33816376	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:31832283;1allele=C/G;version=Hapmap2;RS=rs834195905;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	33816285	33816384	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:31832291;1allele=G/A;version=Hapmap2;RS=rs842556181;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	34138890	34138989	.	+	.	Name=Leaf_width;B73v2_pos=4:32191608;1allele=A/G;version=Hapmap2;RS=rs847488801;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	34733932	34734031	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:32771147;1allele=T/C;version=Hapmap2;RS=rs841375853;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	35125480	35125579	.	+	.	Name=Leaf_width;B73v2_pos=4:33160979;1allele=C/T;version=Hapmap2;RS=rs129671110;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	35530232	35530331	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:33580703;1allele=C/T;version=Hapmap2;RS=rs812197083;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	35880822	35880921	.	+	.	Name=Leaf_width;B73v2_pos=4:33912047;1allele=C/T;version=Hapmap2;RS=rs277367990;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	35926217	35926316	.	+	.	Name=Leaf_width;B73v2_pos=4:33983847;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	36148875	36148974	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:34181247;1allele=C/T;version=Hapmap2;RS=rs844513620;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	36498177	36498276	.	+	.	Name=Ear_row_number;B73v2_pos=4:34557382;1allele=T/A;version=Hapmap2;RS=rs817765520;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	36922054	36922153	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:34931798;1allele=+/-;version=Hapmap2;RS=rs129673880;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	36924465	36924564	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:34934209;1allele=A/C;version=Hapmap2;RS=rs129673896;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	36926053	36926152	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:34935798;1allele=A/G;version=Hapmap2;RS=rs819073912;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	36926891	36926990	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:34936636;1allele=G/A;version=Hapmap2;RS=rs129673919;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	36926909	36927008	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:34936654;1allele=G/A;version=Hapmap2;RS=rs129673920;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	37079791	37079890	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:35090224;1allele=T/C;version=Hapmap2;RS=rs129674087;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	37274016	37274115	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:35274392;1allele=T/A;version=Hapmap2;RS=rs129674551;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	37276704	37276803	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:35277080;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	37457004	37457103	.	+	.	Name=Nitrate;B73v2_pos=4:154376151;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	37482023	37482122	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:35475386;1allele=G/A;version=Hapmap2;RS=rs803933798;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	38003221	38003320	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:35987024;1allele=G/A;version=Hapmap2;RS=rs129675764;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	38145053	38145152	.	+	.	Name=Ear_row_number;B73v2_pos=4:36122610;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	38145130	38145229	.	+	.	Name=Ear_row_number;B73v2_pos=4:36122687;1allele=C/A;version=Hapmap1;RS=rs822766255;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	38153144	38153243	.	+	.	Name=Ear_row_number;B73v2_pos=4:36130702;1allele=T/C;version=Hapmap2;RS=rs277373110;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	38153717	38153816	.	+	.	Name=Cob_diameter;B73v2_pos=4:36131275;1allele=A/G;version=Hapmap2;RS=rs805012628;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	38160149	38160248	.	+	.	Name=Cob_diameter;B73v2_pos=4:36137706;1allele=T/C;version=Hapmap2;RS=rs129675978;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	38182896	38182995	.	+	.	Name=Cob_diameter;B73v2_pos=4:36160454;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	38191182	38191281	.	+	.	Name=Cob_diameter;B73v2_pos=4:36168740;1allele=G/T;version=Hapmap2;RS=rs822361056;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	38324112	38324211	.	+	.	Name=Cob_diameter;B73v2_pos=4:36303880;1allele=A/G;version=Hapmap2;RS=rs129676287;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	38324398	38324497	.	+	.	Name=Cob_diameter;B73v2_pos=4:36304166;1allele=C/T;version=Hapmap2;RS=rs277373336;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	38325180	38325279	.	+	.	Name=Cob_diameter;B73v2_pos=4:36304948;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	38367720	38367819	.	+	.	Name=Cob_diameter;B73v2_pos=4:36349243;1allele=A/C;version=Hapmap2;RS=rs1064178229;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	38372745	38372844	.	+	.	Name=Cob_diameter;B73v2_pos=4:36354268;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	38425919	38426018	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:36408046;1allele=A/G;version=Hapmap2;RS=rs850394122;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	38431140	38431239	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:36413268;1allele=A/G;version=Hapmap2;RS=rs810059411;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	38536810	38536909	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:36520952;1allele=C/G;version=Hapmap2;RS=rs815929900;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	38569896	38569995	.	+	.	Name=Leaf_width;B73v2_pos=4:36547169;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	38625001	38625100	.	+	.	Name=Leaf_width;B73v2_pos=4:36649817;1allele=G/A;version=Hapmap2;RS=rs1064617212;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	38718150	38718249	.	+	.	Name=Leaf_width;B73v2_pos=4:36685037;1allele=C/T;version=Hapmap2;RS=rs818186911;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	38800427	38800526	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:36768211;1allele=A/C;version=Hapmap2;RS=rs845911146;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	39121781	39121880	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:37099911;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	39122822	39122921	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:37100952;1allele=T/C;version=Hapmap2;RS=rs804344998;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	39122900	39122999	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:37101030;1allele=C/T;version=Hapmap2;RS=rs131448264;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	39317402	39317501	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:37285150;1allele=G/T;version=Hapmap2;RS=rs814940349;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	39359108	39359207	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:37393029;1allele=/CCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	39364101	39364200	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:37388036;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	39737053	39737152	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:37699138;1allele=G/A;version=Hapmap2;RS=rs807519595;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	39985780	39985879	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:37938556;1allele=C/G;version=Hapmap1;RS=rs129679028;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	40065575	40065674	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:38020924;1allele=T/C;version=Hapmap2;RS=rs826035647;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	40072603	40072702	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:38027892;1allele=G/A;version=Hapmap1;RS=rs131448801;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	40072907	40073006	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:38028196;1allele=A/G;version=Hapmap2;RS=rs129679061;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	40103439	40103538	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:38059999;1allele=A/T;version=Hapmap2;RS=rs846673175;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	40223108	40223207	.	+	.	Name=Leaf_width;B73v2_pos=4:38179422;1allele=A/G;version=Hapmap2;RS=rs129679201;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	40479551	40479650	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:38418207;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	40595409	40595508	.	+	.	Name=Leaf_length;B73v2_pos=4:38545685;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	40643294	40643393	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:38596196;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	40676157	40676256	.	+	.	Name=Height_above_ear;B73v2_pos=4:38629166;1allele=T/A;version=Hapmap2;RS=rs1064299989;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	40676157	40676256	.	+	.	Name=Plant_height;B73v2_pos=4:38629166;1allele=T/A;version=Hapmap2;RS=rs1064299989;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	40759665	40759764	.	+	.	Name=Height_above_ear;B73v2_pos=4:38726450;1allele=A/G;version=Hapmap2;RS=rs277377988;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	40759665	40759764	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:38726450;1allele=A/G;version=Hapmap2;RS=rs277377988;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	40759665	40759764	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:38726450;1allele=A/G;version=Hapmap2;RS=rs277377988;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	40768227	40768326	.	+	.	Name=Plant_height;B73v2_pos=4:38735013;1allele=G/C;version=Hapmap2;RS=rs826047016;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	40833884	40833983	.	+	.	Name=Plant_height;B73v2_pos=4:38801762;1allele=G/A;version=Hapmap2;RS=rs131449353;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	40853062	40853161	.	+	.	Name=Plant_height;B73v2_pos=4:38821246;1allele=C/T;version=Hapmap2;RS=rs277378203;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	40868619	40868718	.	+	.	Name=Leaf_length;B73v2_pos=4:38836962;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	40876192	40876291	.	+	.	Name=Height_above_ear;B73v2_pos=4:38844537;1allele=T/C;version=Hapmap2;RS=rs832826333;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	40876559	40876658	.	+	.	Name=Height_above_ear;B73v2_pos=4:38844904;1allele=C/T;version=Hapmap2;RS=rs810730354;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	40876559	40876658	.	+	.	Name=Plant_height;B73v2_pos=4:38844904;1allele=C/T;version=Hapmap2;RS=rs810730354;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	40938797	40938896	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:38900633;1allele=G/A;version=Hapmap2;RS=rs825095709;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	40958647	40958746	.	+	.	Name=Height_above_ear;B73v2_pos=4:38920483;1allele=C/T;version=Hapmap1;RS=rs131449397;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	40961746	40961845	.	+	.	Name=Plant_height;B73v2_pos=4:38923582;1allele=T/C;version=Hapmap2;RS=rs129680213;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	40977805	40977904	.	+	.	Name=Plant_height;B73v2_pos=4:38939643;1allele=C/A;version=Hapmap2;RS=rs131449406;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	40977981	40978080	.	+	.	Name=Plant_height;B73v2_pos=4:38939819;1allele=C/G;version=Hapmap2;RS=rs129680267;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	40993600	40993699	.	+	.	Name=Plant_height;B73v2_pos=4:38955438;1allele=T/G;version=Hapmap2;RS=rs817408912;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	40999425	40999524	.	+	.	Name=Cob_diameter;B73v2_pos=4:38961263;1allele=C/T;version=Hapmap2;RS=rs129680334;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	41380433	41380532	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:39333604;1allele=A/T;version=Hapmap2;RS=rs821466552;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	41381899	41381998	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:39335070;1allele=T/-;version=Hapmap1;RS=rs131449558;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	41402990	41403089	.	+	.	Name=Ear_row_number;B73v2_pos=4:39356161;1allele=T/C;version=Hapmap2;RS=rs822379975;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	41418121	41418220	.	+	.	Name=Ear_row_number;B73v2_pos=4:39371292;1allele=C/T;version=Hapmap2;RS=rs811202383;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	41503401	41503500	.	+	.	Name=Ear_row_number;B73v2_pos=4:39458254;1allele=T/C;version=Hapmap2;RS=rs823800508;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	41508934	41509033	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:39463787;1allele=C/T;version=Hapmap2;RS=rs835291917;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	42086693	42086792	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:40012997;1allele=A/G;version=Hapmap1;RS=rs131449977;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	42762244	42762343	.	+	.	Name=Ear_row_number;B73v2_pos=4:40689321;1allele=A/G;version=Hapmap2;RS=rs830473029;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	43026527	43026626	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:213708655;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	43442578	43442677	.	+	.	Name=Ear_row_number;B73v2_pos=4:41381995;1allele=G/A;version=Hapmap2;RS=rs816151137;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	43916404	43916503	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:41842682;1allele=T/C;version=Hapmap2;RS=rs129682204;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	44541285	44541384	.	+	.	Name=Days_to_silk;B73v2_pos=4:42402973;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	44552719	44552818	.	+	.	Name=Days_to_silk;B73v2_pos=4:42391733;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	44714418	44714517	.	+	.	Name=Days_to_silk;B73v2_pos=4:42622820;1allele=G/A;version=Hapmap2;RS=rs842779278;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	44762267	44762366	.	+	.	Name=Days_to_silk;B73v2_pos=4:42671566;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	44782177	44782276	.	+	.	Name=Days_to_silk;B73v2_pos=4:42683759;1allele=C/T;version=Hapmap2;RS=rs843823735;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	44792861	44792960	.	+	.	Name=Days_to_silk;B73v2_pos=4:42694443;1allele=C/T;version=Hapmap2;RS=rs812213308;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	44829862	44829961	.	+	.	Name=Days_to_silk;B73v2_pos=4:42731451;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	44869720	44869819	.	+	.	Name=Days_to_silk;B73v2_pos=4:42771311;1allele=C/T;version=Hapmap2;RS=rs726320480;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	44964189	44964288	.	+	.	Name=Ear_row_number;B73v2_pos=4:42820153;1allele=C/T;version=Hapmap2;RS=rs818406443;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	45318995	45319094	.	+	.	Name=Stalk_strength;B73v2_pos=4:43189060;1allele=T/C;version=Hapmap2;RS=rs727168144;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	45333846	45333945	.	+	.	Name=Days_to_silk;B73v2_pos=4:43204037;1allele=G/A;version=Hapmap2;RS=rs820152087;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	45538684	45538783	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:43407258;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	46872165	46872264	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:44729105;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	46893003	46893102	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:44749943;1allele=C/T;version=Hapmap2;RS=rs848785931;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	47456579	47456678	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:45319522;1allele=T/C;version=Hapmap2;RS=rs822927235;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	47524276	47524375	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:45379655;1allele=C/T;version=Hapmap2;RS=rs834335534;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	48060441	48060540	.	+	.	Name=Ear_row_number;B73v2_pos=4:45788391;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	48678488	48678587	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:46371659;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	48795634	48795733	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:46604430;1allele=G/A;version=Hapmap2;RS=rs724856502;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	48805761	48805860	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:46477420;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	48889819	48889918	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:46520741;1allele=T/C;version=Hapmap2;RS=rs807412223;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	48900386	48900485	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:46550502;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	49401495	49401594	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:47054658;1allele=T/C;version=Hapmap2;RS=rs812160785;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	49738816	49738915	.	+	.	Name=Cob_diameter;B73v2_pos=4:47324391;1allele=C/G;version=Hapmap1;RS=rs131453033;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	49979554	49979653	.	+	.	Name=Plant_height;B73v2_pos=4:47560030;1allele=A/C;version=Hapmap2;RS=rs726448391;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	50409398	50409497	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:47966834;1allele=T/C;version=Hapmap2;RS=rs1061946233;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	51861177	51861276	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:49407572;1allele=C/T;version=Hapmap2;RS=rs835286408;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	52179184	52179283	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:49714671;1allele=A/C;version=Hapmap2;RS=rs817284955;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	52221996	52222095	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:49757361;1allele=T/C;version=Hapmap2;RS=rs805032374;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	53060176	53060275	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:50590165;1allele=C/T;version=Hapmap2;RS=rs849791163;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	54840017	54840116	.	+	.	Name=Stalk_strength;B73v2_pos=4:52366772;1allele=G/A;version=Hapmap2;RS=rs726846878;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	55741605	55741704	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:53243451;1allele=A/T;version=Hapmap2;RS=rs129703627;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	55742108	55742207	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:53243954;1allele=T/A;version=Hapmap2;RS=rs725187017;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	55860008	55860107	.	+	.	Name=Stalk_strength;B73v2_pos=4:53351009;1allele=G/A;version=Hapmap2;RS=rs831127443;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	55984517	55984616	.	+	.	Name=Leaf_width;B73v2_pos=4:53483395;1allele=G/A;version=Hapmap2;RS=rs837893735;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	56390376	56390475	.	+	.	Name=Days_to_silk;B73v2_pos=4:53889139;1allele=C/T;version=Hapmap2;RS=rs834419269;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	56405227	56405326	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:53903638;1allele=C/A;version=Hapmap2;RS=rs822564462;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	56733775	56733874	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:54219852;1allele=A/G;version=Hapmap2;RS=rs1062982907;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	56837006	56837105	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:54331695;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	56946212	56946311	.	+	.	Name=Days_to_silk;B73v2_pos=4:54427683;1allele=C/A;version=Hapmap2;RS=rs817705461;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	57185454	57185553	.	+	.	Name=Cob_diameter;B73v2_pos=4:54657359;1allele=G/C;version=Hapmap2;RS=rs129706550;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	57644472	57644571	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:16170636;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	57714043	57714142	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:55168878;1allele=T/C;version=Hapmap2;RS=rs811909717;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	57769339	57769438	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:55207737;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	57878079	57878178	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:55331445;1allele=T/G;version=Hapmap2;RS=rs843675450;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	58205582	58205681	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:55625949;1allele=T/C;version=Hapmap2;RS=rs806983788;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	58205582	58205681	.	+	.	Name=Days_to_silk;B73v2_pos=4:55625949;1allele=T/C;version=Hapmap2;RS=rs806983788;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	58392862	58392961	.	+	.	Name=Ear_row_number;B73v2_pos=4:55819600;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	58436796	58436895	.	+	.	Name=Cob_diameter;B73v2_pos=4:55853983;1allele=C/T;version=Hapmap2;RS=rs129708430;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	58507014	58507113	.	+	.	Name=Nitrate;B73v2_pos=4:55925179;1allele=T/C;version=Hapmap2;RS=rs727301568;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	58741961	58742060	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:56151418;1allele=A/G;version=Hapmap2;RS=rs1063594508;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	58905047	58905146	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:56307515;1allele=T/A;version=Hapmap2;RS=rs277392077;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	58944631	58944730	.	+	.	Name=Days_to_silk;B73v2_pos=4:56347246;1allele=G/A;version=Hapmap2;RS=rs844500781;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	59298771	59298870	.	+	.	Name=Stalk_strength;B73v2_pos=4:56713238;1allele=C/T;version=Hapmap1;RS=rs131457634;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	59444805	59444904	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:56862514;1allele=T/C;version=Hapmap2;RS=rs277393420;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	59508057	59508156	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:56919864;1allele=T/C;version=Hapmap2;RS=rs129710682;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	59622752	59622851	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:57030613;1allele=A/C;version=Hapmap2;RS=rs840781044;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	59965602	59965701	.	+	.	Name=Days_to_silk;B73v2_pos=4:57372220;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	59967556	59967655	.	+	.	Name=Tassel_length;B73v2_pos=4:57374174;1allele=T/C;version=Hapmap2;RS=rs277394286;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	60094778	60094877	.	+	.	Name=Nitrate;B73v2_pos=4:57497010;1allele=G/A;version=Hapmap2;RS=rs811902124;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	60173208	60173307	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:57570856;1allele=G/A;version=Hapmap2;RS=rs129711414;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	60173208	60173307	.	+	.	Name=Plant_height;B73v2_pos=4:57570856;1allele=G/A;version=Hapmap2;RS=rs129711414;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	60237387	60237486	.	+	.	Name=Days_to_silk;B73v2_pos=4:57636083;1allele=C/G;version=Hapmap2;RS=rs822444698;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	60298988	60299087	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:7356584;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	61825571	61825670	.	+	.	Name=Days_to_silk;B73v2_pos=4:59206879;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	61937144	61937243	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:59307559;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	61937144	61937243	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:59307559;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	62170270	62170369	.	+	.	Name=Leaf_length;B73v2_pos=4:59534184;1allele=G/A;version=Hapmap2;RS=rs815228790;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	62690190	62690289	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:60030479;1allele=C/T;version=Hapmap2;RS=rs1062906214;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	62822122	62822221	.	+	.	Name=Ear_row_number;B73v2_pos=4:60159780;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	62946637	62946736	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:60277062;1allele=C/A;version=Hapmap1;RS=rs131458777;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	63024623	63024722	.	+	.	Name=Tassel_length;B73v2_pos=4:60355030;1allele=T/C;version=Hapmap2;RS=rs277398272;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	63097683	63097782	.	+	.	Name=Height_above_ear;B73v2_pos=4:60428580;1allele=C/T;version=Hapmap2;RS=rs816611852;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	63554591	63554690	.	+	.	Name=Ear_row_number;B73v2_pos=4:60883934;1allele=C/T;version=Hapmap2;RS=rs277398769;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	63605247	63605346	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:60934589;1allele=C/T;version=Hapmap2;RS=rs824189179;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	63655882	63655981	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:60958044;1allele=G/A;version=Hapmap2;RS=rs277398849;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	63946460	63946559	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:61269449;1allele=T/C;version=Hapmap2;RS=rs821806069;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	64135474	64135573	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:61490038;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	64830512	64830611	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:62107385;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	64838142	64838241	.	+	.	Name=Cob_diameter;B73v2_pos=4:62099755;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	65510493	65510592	.	+	.	Name=Days_to_silk;B73v2_pos=4:62741525;1allele=C/T;version=Hapmap2;RS=rs844162425;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	65510493	65510592	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:62741525;1allele=C/T;version=Hapmap2;RS=rs844162425;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	65883308	65883407	.	+	.	Name=Stalk_strength;B73v2_pos=4:63106247;1allele=A/G;version=Hapmap2;RS=rs277403042;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	65884215	65884314	.	+	.	Name=Leaf_width;B73v2_pos=4:63107154;1allele=T/C;version=Hapmap2;RS=rs1063684540;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	65916049	65916148	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:63139671;1allele=T/C;version=Hapmap2;RS=rs129716775;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	65977040	65977139	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:63197917;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	66176733	66176832	.	+	.	Name=Cob_diameter;B73v2_pos=4:63364346;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	66316383	66316482	.	+	.	Name=Ear_row_number;B73v2_pos=4:63517938;1allele=C/T;version=Hapmap2;RS=rs811434212;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	66587838	66587937	.	+	.	Name=Plant_height;B73v2_pos=4:63915076;1allele=A/G;version=Hapmap2;RS=rs826253002;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	66602440	66602539	.	+	.	Name=Cob_diameter;B73v2_pos=4:63929681;1allele=T/C;version=Hapmap2;RS=rs1062400669;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	66761754	66761853	.	+	.	Name=Height_above_ear;B73v2_pos=4:64107551;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	66801348	66801447	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:64068957;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	67355929	67356028	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:64642054;1allele=G/A;version=Hapmap2;RS=rs845911558;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	67858507	67858606	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:65195293;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	67858507	67858606	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:65195293;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	68031791	68031890	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:65317604;1allele=T/C;version=Hapmap2;RS=rs829604856;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	68086791	68086890	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:65370841;1allele=T/A;version=Hapmap2;RS=rs824481226;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	68182334	68182433	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:65467101;1allele=T/C;version=Hapmap2;RS=rs819933631;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	68190547	68190646	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:65475314;1allele=A/G;version=Hapmap2;RS=rs725075577;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	68290720	68290819	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:65518419;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	68291090	68291189	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:65518049;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	68292846	68292945	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:65516293;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	68433053	68433152	.	+	.	Name=Days_to_silk;B73v2_pos=4:65717788;1allele=C/A;version=Hapmap2;RS=rs842743101;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	68992875	68992974	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:66284850;1allele=C/T;version=Hapmap2;RS=rs131460516;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	69426938	69427037	.	+	.	Name=Leaf_length;B73v2_pos=4:66703364;1allele=C/T;version=Hapmap2;RS=rs277405842;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	69644707	69644806	.	+	.	Name=Cob_diameter;B73v2_pos=4:66910827;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	69898792	69898891	.	+	.	Name=Tassel_length;B73v2_pos=4:67142470;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	69908114	69908213	.	+	.	Name=Leaf_width;B73v2_pos=4:67151710;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	69989682	69989781	.	+	.	Name=Leaf_width;B73v2_pos=4:67234277;1allele=G/A;version=Hapmap2;RS=rs815688417;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	69989695	69989794	.	+	.	Name=Leaf_width;B73v2_pos=4:67234290;1allele=G/A;version=Hapmap2;RS=rs805472054;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	70053583	70053682	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:67282693;1allele=A/T;version=Hapmap2;RS=rs849645621;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	70077810	70077909	.	+	.	Name=Tassel_length;B73v2_pos=4:67305758;1allele=T/C;version=Hapmap2;RS=rs1060915683;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	70844908	70845007	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:68022634;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	71201547	71201646	.	+	.	Name=Height_above_ear;B73v2_pos=4:68289887;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	71201547	71201646	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:68289887;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	71485514	71485613	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:68544879;1allele=C/T;version=Hapmap2;RS=rs847309543;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	71562306	71562405	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:68621673;1allele=T/C;version=Hapmap2;RS=rs806535534;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	71612448	71612547	.	+	.	Name=Height_above_ear;B73v2_pos=4:68671821;1allele=G/A;version=Hapmap2;RS=rs842036588;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	71716067	71716101	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:209980195;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	71741817	71741916	.	+	.	Name=Ear_row_number;B73v2_pos=4:68800815;1allele=G/A;version=Hapmap2;RS=rs725061089;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	71756036	71756135	.	+	.	Name=Ear_row_number;B73v2_pos=4:68814440;1allele=T/G;version=Hapmap2;RS=rs821626421;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	71795581	71795680	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:68853223;1allele=G/A;version=Hapmap2;RS=rs821932481;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	71798081	71798180	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:68855723;1allele=T/A;version=Hapmap2;RS=rs129725814;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	71943822	71943921	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:68985234;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	72028518	72028617	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:69070981;1allele=T/C;version=Hapmap2;RS=rs850216960;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	72030968	72031067	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:69073432;1allele=A/T;version=Hapmap2;RS=rs831216885;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	72069299	72069398	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:69111766;1allele=T/A;version=Hapmap2;RS=rs838840518;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	72078626	72078725	.	+	.	Name=Ear_row_number;B73v2_pos=4:69121095;1allele=A/G;version=Hapmap2;RS=rs129726134;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	72078894	72078993	.	+	.	Name=Ear_row_number;B73v2_pos=4:69121363;1allele=A/G;version=Hapmap2;RS=rs727418201;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	72142236	72142335	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:69193816;1allele=G/A;version=Hapmap2;RS=rs840271226;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	72158398	72158497	.	+	.	Name=Ear_row_number;B73v2_pos=4:69261414;1allele=A/G;version=Hapmap2;RS=rs810711683;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	72329858	72329957	.	+	.	Name=Ear_height;B73v2_pos=4:69383922;1allele=G/A;version=Hapmap2;RS=rs277411401;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	72730651	72730750	.	+	.	Name=Days_to_silk;B73v2_pos=4:69793690;1allele=G/A;version=Hapmap2;RS=rs806871448;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	72814200	72814299	.	+	.	Name=Tassel_length;B73v2_pos=4:69877272;1allele=C/T;version=Hapmap2;RS=rs129726800;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	72861734	72861833	.	+	.	Name=Stalk_strength;B73v2_pos=4:69921953;1allele=G/A;version=Hapmap2;RS=rs277412189;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	72862103	72862202	.	+	.	Name=Stalk_strength;B73v2_pos=4:69922322;1allele=A/G;version=Hapmap2;RS=rs277412192;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	72864168	72864267	.	+	.	Name=Stalk_strength;B73v2_pos=4:69924387;1allele=G/A;version=Hapmap2;RS=rs277412218;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	72864388	72864487	.	+	.	Name=Plant_height;B73v2_pos=4:69924607;1allele=G/C;version=Hapmap2;RS=rs277412222;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	72879823	72879922	.	+	.	Name=Plant_height;B73v2_pos=4:69948870;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	73081735	73081834	.	+	.	Name=Stalk_strength;B73v2_pos=4:70126398;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	73410577	73410676	.	+	.	Name=Plant_height;B73v2_pos=4:70447891;1allele=C/G;version=Hapmap2;RS=rs835497594;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	73565093	73565192	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:70602010;1allele=T/G;version=Hapmap2;RS=rs131462362;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	73591895	73591994	.	+	.	Name=Ear_row_number;B73v2_pos=4:70695769;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	73595890	73595989	.	+	.	Name=Ear_row_number;B73v2_pos=4:70691774;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	73622127	73622226	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:70633655;1allele=A/T;version=Hapmap2;RS=rs823707078;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	73779485	73779584	.	+	.	Name=Ear_row_number;B73v2_pos=4:70838616;1allele=-/+;version=Hapmap2;RS=rs807933851;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	73830288	73830387	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:70919815;1allele=A/C;version=Hapmap2;RS=rs837218482;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	73967168	73967267	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:71083394;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	73978070	73978169	.	+	.	Name=Ear_row_number;B73v2_pos=4:71095063;1allele=G/A;version=Hapmap2;RS=rs842265375;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	73998812	73998911	.	+	.	Name=Leaf_width;B73v2_pos=4:71063028;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	74113105	74113204	.	+	.	Name=Ear_row_number;B73v2_pos=4:71210324;1allele=C/T;version=Hapmap2;RS=rs847248946;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	74117338	74117437	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:71214557;1allele=G/C;version=Hapmap1;RS=rs131462566;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	74117338	74117437	.	+	.	Name=Plant_height;B73v2_pos=4:71214557;1allele=G/C;version=Hapmap1;RS=rs131462566;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	74120915	74121014	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:71218134;1allele=G/A;version=Hapmap2;RS=rs277415904;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	74388981	74389080	.	+	.	Name=Ear_row_number;B73v2_pos=4:71453859;1allele=G/A;version=Hapmap2;RS=rs807197591;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	74468074	74468173	.	+	.	Name=Nitrate;B73v2_pos=4:71560628;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	74673766	74673865	.	+	.	Name=Ear_row_number;B73v2_pos=4:71805039;1allele=G/A;version=Hapmap1;RS=rs129729553;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	74687526	74687625	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:71819040;1allele=A/G;version=Hapmap2;RS=rs277417247;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	74805459	74805558	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:71895167;1allele=G/C;version=Hapmap2;RS=rs829909549;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	74818268	74818367	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:71907976;1allele=TTG/;version=Hapmap1;RS=rs826128947;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	74818424	74818523	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:71908132;1allele=A/C;version=Hapmap2;RS=rs131462837;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	74959624	74959723	.	+	.	Name=Cob_diameter;B73v2_pos=4:72048485;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	74962506	74962605	.	+	.	Name=Cob_diameter;B73v2_pos=4:72051367;1allele=G/A;version=Hapmap2;RS=rs131462968;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	74972445	74972544	.	+	.	Name=Ear_row_number;B73v2_pos=4:72061306;1allele=T/C;version=Hapmap2;RS=rs828172655;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	74979933	74980032	.	+	.	Name=Ear_row_number;B73v2_pos=4:72068794;1allele=A/T;version=Hapmap2;RS=rs848401407;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	74981216	74981315	.	+	.	Name=Ear_row_number;B73v2_pos=4:72070077;1allele=A/C;version=Hapmap2;RS=rs809626405;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	75165832	75165931	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:72242677;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	75305220	75305319	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:10112740;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	75305220	75305319	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:10112740;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	75796048	75796147	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:72867799;1allele=A/G;version=Hapmap2;RS=rs277418631;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	75798429	75798528	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:72870180;1allele=A/G;version=Hapmap2;RS=rs129730482;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	75985149	75985248	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:73052650;1allele=G/T;version=Hapmap2;RS=rs825749786;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	75987324	75987423	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:73054825;1allele=T/C;version=Hapmap2;RS=rs277419261;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	75987908	75988007	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:73055410;1allele=G/A;version=Hapmap2;RS=rs849944267;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	76002713	76002812	.	+	.	Name=Cob_diameter;B73v2_pos=4:73126801;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76003264	76003363	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73126250;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76059974	76060073	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73068219;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76074731	76074830	.	+	.	Name=Cob_diameter;B73v2_pos=4:73143355;1allele=C/A;version=Hapmap2;RS=rs1064079621;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	76080209	76080308	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73148835;1allele=G/A;version=Hapmap2;RS=rs724857066;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	76093666	76093765	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73163114;1allele=C/T;version=Hapmap2;RS=rs277419517;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	76112019	76112118	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73181593;1allele=G/A;version=Hapmap2;RS=rs725798524;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	76136146	76136245	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:73196566;1allele=T/C;version=Hapmap2;RS=rs277419681;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	76144934	76145033	.	+	.	Name=Plant_height;B73v2_pos=4:73205357;1allele=T/G;version=Hapmap2;RS=rs808140835;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	76163176	76163275	.	+	.	Name=Cob_diameter;B73v2_pos=4:73223611;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76214307	76214406	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73294626;1allele=A/T;version=Hapmap2;RS=rs830809338;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	76214332	76214431	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73294651;1allele=T/G;version=Hapmap2;RS=rs816868638;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	76215490	76215589	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:73258076;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76215924	76216023	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73258510;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76256861	76256960	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73311013;1allele=C/T;version=Hapmap2;RS=rs724465960;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	76256861	76256960	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:73311013;1allele=C/T;version=Hapmap2;RS=rs724465960;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	76262902	76263001	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73317055;1allele=T/A;version=Hapmap2;RS=rs129730764;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	76285712	76285811	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73339869;1allele=G/A;version=Hapmap2;RS=rs277420051;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	76285892	76285991	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:73340049;1allele=A/C;version=Hapmap2;RS=rs277420056;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	76362142	76362241	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:73424314;1allele=T/A;version=Hapmap2;RS=rs824663678;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	76394365	76394464	.	+	.	Name=Days_to_silk;B73v2_pos=4:73456536;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76546147	76546246	.	+	.	Name=Plant_height;B73v2_pos=4:73659476;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76700397	76700496	.	+	.	Name=Leaf_width;B73v2_pos=4:73747730;1allele=A/G;version=Hapmap2;RS=rs1061750734;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	76723122	76723221	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:73780477;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	76830220	76830319	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:73852529;1allele=T/C;version=Hapmap2;RS=rs838858703;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	77611114	77611213	.	+	.	Name=Days_to_silk;B73v2_pos=4:74639785;1allele=G/A;version=Hapmap2;RS=rs129731555;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	77659775	77659874	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:74688225;1allele=G/A;version=Hapmap2;RS=rs724767967;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	77666434	77666533	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:74694884;1allele=A/T;version=Hapmap2;RS=rs821468618;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	77875061	77875160	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:74898177;1allele=A/G;version=Hapmap2;RS=rs845829066;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	77907474	77907573	.	+	.	Name=Tassel_length;B73v2_pos=4:74929960;1allele=T/C;version=Hapmap2;RS=rs1061182665;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	77997028	77997127	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:75020926;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	78033253	78033352	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:75056535;1allele=G/A;version=Hapmap2;RS=rs726184617;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	78048078	78048177	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:75071364;1allele=T/G;version=Hapmap2;RS=rs809620404;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	78072275	78072374	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:75087431;1allele=G/T;version=Hapmap2;RS=rs838182096;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	78139918	78140017	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:75163214;1allele=A/G;version=Hapmap2;RS=rs812595326;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	78247327	78247426	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:75283582;1allele=G/A;version=Hapmap2;RS=rs129732334;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	78357607	78357706	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:75396590;1allele=G/A;version=Hapmap2;RS=rs277424275;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	78415430	78415529	.	+	.	Name=Nitrate;B73v2_pos=4:75446869;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	78525096	78525195	.	+	.	Name=Cob_diameter;B73v2_pos=4:75563762;1allele=T/C;version=Hapmap2;RS=rs805031107;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	78597083	78597182	.	+	.	Name=Cob_diameter;B73v2_pos=4:75630902;1allele=A/G;version=Hapmap2;RS=rs811086789;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	79354387	79354486	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:76328995;1allele=A/G;version=Hapmap2;RS=rs724206244;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	79364095	79364194	.	+	.	Name=Days_to_silk;B73v2_pos=4:76338703;1allele=C/T;version=Hapmap2;RS=rs129733576;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	79364282	79364381	.	+	.	Name=Cob_diameter;B73v2_pos=4:76338890;1allele=A/G;version=Hapmap2;RS=rs129733580;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	79368431	79368530	.	+	.	Name=Cob_diameter;B73v2_pos=4:76343039;1allele=C/T;version=Hapmap2;RS=rs129733617;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	79375760	79375859	.	+	.	Name=Cob_diameter;B73v2_pos=4:76350369;1allele=A/T;version=Hapmap2;RS=rs129733647;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	79408622	79408721	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:76383223;1allele=G/A;version=Hapmap2;RS=rs807665188;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	79446403	79446502	.	+	.	Name=Ear_height;B73v2_pos=4:76417168;1allele=C/T;version=Hapmap2;RS=rs1060789900;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	79991163	79991262	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:77012085;1allele=T/A;version=Hapmap2;RS=rs129734289;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	80146130	80146229	.	+	.	Name=Nitrate;B73v2_pos=4:77160075;1allele=T/C;version=Hapmap2;RS=rs277426995;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	81265616	81265715	.	+	.	Name=Nitrate;B73v2_pos=4:78241790;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	81342431	81342530	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:78318610;1allele=T/C;version=Hapmap2;RS=rs277429129;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	81456724	81456823	.	+	.	Name=Nitrate;B73v2_pos=4:78443375;1allele=A/C;version=Hapmap2;RS=rs824270098;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	81499711	81499810	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:78486846;1allele=T/C;version=Hapmap2;RS=rs809963228;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	81542915	81543014	.	+	.	Name=Nitrate;B73v2_pos=4:78531602;1allele=A/G;version=Hapmap2;RS=rs277429456;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	81556529	81556628	.	+	.	Name=Plant_height;B73v2_pos=4:78545218;1allele=C/T;version=Hapmap2;RS=rs131465606;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	81562889	81562988	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:78551579;1allele=C/T;version=Hapmap2;RS=rs835567986;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	81668235	81668334	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:78656870;1allele=A/G;version=Hapmap2;RS=rs129737788;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	81792050	81792149	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:78786805;1allele=A/C;version=Hapmap2;RS=rs129738164;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	81944067	81944166	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:78929681;1allele=A/G;version=Hapmap2;RS=rs277429935;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	81944371	81944470	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:78929985;1allele=C/A;version=Hapmap2;RS=rs129738393;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	81944371	81944470	.	+	.	Name=Plant_height;B73v2_pos=4:78929985;1allele=C/A;version=Hapmap2;RS=rs129738393;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	82067686	82067785	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:79053958;1allele=A/G;version=Hapmap2;RS=rs1064138428;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	82250044	82250143	.	+	.	Name=Leaf_width;B73v2_pos=4:79228897;1allele=T/C;version=Hapmap2;RS=rs277430283;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	82870237	82870336	.	+	.	Name=Leaf_width;B73v2_pos=4:79843669;1allele=A/T;version=Hapmap2;RS=rs806506632;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	82885873	82885972	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:79859594;1allele=A/G;version=Hapmap2;RS=rs806984267;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	82887939	82888038	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:79861660;1allele=C/T;version=Hapmap2;RS=rs836395741;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	82941597	82941696	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:79929217;1allele=T/C;version=Hapmap2;RS=rs801911863;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	83219324	83219423	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:80196628;1allele=A/C;version=Hapmap2;RS=rs277431775;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	83411232	83411331	.	+	.	Name=Leaf_width;B73v2_pos=4:80388978;1allele=T/C;version=Hapmap2;RS=rs277432388;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	83490222	83490321	.	+	.	Name=Leaf_width;B73v2_pos=4:80471038;1allele=G/A;version=Hapmap2;RS=rs822264162;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	83557506	83557605	.	+	.	Name=Leaf_width;B73v2_pos=4:80539296;1allele=G/A;version=Hapmap2;RS=rs277432567;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	83630222	83630321	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:80632786;1allele=A/G;version=Hapmap2;RS=rs725502513;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	83630222	83630321	.	+	.	Name=Days_to_silk;B73v2_pos=4:80632786;1allele=A/G;version=Hapmap2;RS=rs725502513;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	84134860	84134959	.	+	.	Name=Days_to_silk;B73v2_pos=4:80985194;1allele=A/G;version=Hapmap2;RS=rs277432962;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	84395496	84395595	.	+	.	Name=Days_to_silk;B73v2_pos=4:81247996;1allele=C/T;version=Hapmap2;RS=rs277433104;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	84398634	84398733	.	+	.	Name=Ear_height;B73v2_pos=4:81251135;1allele=G/A;version=Hapmap2;RS=rs129741388;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	84421955	84422054	.	+	.	Name=Days_to_silk;B73v2_pos=4:81275030;1allele=G/A;version=Hapmap2;RS=rs827878207;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	84455001	84455100	.	+	.	Name=Days_to_silk;B73v2_pos=4:81301782;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	84478734	84478833	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:81324682;1allele=C/T;version=Hapmap2;RS=rs838618021;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	84612536	84612635	.	+	.	Name=Sucrose;B73v2_pos=4:81456759;1allele=A/T;version=Hapmap2;RS=rs819682872;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	84696034	84696133	.	+	.	Name=Leaf_width;B73v2_pos=4:81540033;1allele=T/C;version=Hapmap2;RS=rs809464983;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	84913756	84913855	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:81753459;1allele=G/A;version=Hapmap2;RS=rs824348178;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	85048867	85048966	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:81889977;1allele=A/C;version=Hapmap2;RS=rs822895625;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	85356262	85356361	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:82197251;1allele=C/T;version=Hapmap2;RS=rs129743385;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	85362321	85362420	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:82203311;1allele=C/G;version=Hapmap2;RS=rs129743407;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	85930028	85930127	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:82762298;1allele=C/T;version=Hapmap2;RS=rs833514484;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	86136242	86136341	.	+	.	Name=Leaf_length;B73v2_pos=4:82935130;1allele=C/T;version=Hapmap2;RS=rs812823685;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	86238996	86239095	.	+	.	Name=Leaf_length;B73v2_pos=4:83034145;1allele=G/A;version=Hapmap2;RS=rs277435117;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	86325788	86325887	.	+	.	Name=Height_above_ear;B73v2_pos=4:83120651;1allele=C/T;version=Hapmap2;RS=rs836044706;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	86325788	86325887	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:83120651;1allele=C/T;version=Hapmap2;RS=rs836044706;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	86364926	86365025	.	+	.	Name=Height_above_ear;B73v2_pos=4:83158169;1allele=G/A;version=Hapmap2;RS=rs842976211;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	86513314	86513413	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:83305720;1allele=A/T;version=Hapmap2;RS=rs726157628;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	86519023	86519122	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:83311429;1allele=C/A;version=Hapmap2;RS=rs802137183;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	86575689	86575788	.	+	.	Name=Glucose;B73v2_pos=4:83365237;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	86761013	86761112	.	+	.	Name=Ear_row_number;B73v2_pos=4:83551948;1allele=+/-;version=Hapmap2;RS=rs817958904;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	86776464	86776563	.	+	.	Name=Ear_row_number;B73v2_pos=4:83567400;1allele=A/G;version=Hapmap2;RS=rs847469397;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	86779140	86779239	.	+	.	Name=Ear_row_number;B73v2_pos=4:83569985;1allele=A/G;version=Hapmap2;RS=rs131467497;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	86858236	86858335	.	+	.	Name=Days_to_silk;B73v2_pos=4:83649237;1allele=C/T;version=Hapmap2;RS=rs824120855;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	86862519	86862618	.	+	.	Name=Days_to_silk;B73v2_pos=4:83653520;1allele=A/C;version=Hapmap2;RS=rs823982648;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	86876520	86876619	.	+	.	Name=Stalk_strength;B73v2_pos=4:83658616;1allele=G/A;version=Hapmap2;RS=rs277436029;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	86949078	86949177	.	+	.	Name=Stalk_strength;B73v2_pos=4:83736897;1allele=C/T;version=Hapmap2;RS=rs131467599;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	86951466	86951565	.	+	.	Name=Stalk_strength;B73v2_pos=4:83739285;1allele=C/T;version=Hapmap2;RS=rs809512911;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	86993454	86993553	.	+	.	Name=Days_to_silk;B73v2_pos=4:83781279;1allele=G/C;version=Hapmap2;RS=rs840213838;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	87030523	87030622	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:83817997;1allele=C/T;version=Hapmap2;RS=rs129745378;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	87031260	87031359	.	+	.	Name=Days_to_silk;B73v2_pos=4:83818734;1allele=A/G;version=Hapmap2;RS=rs827061866;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	87195668	87195767	.	+	.	Name=Tassel_length;B73v2_pos=4:83884749;1allele=C/T;version=Hapmap2;RS=rs843583816;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	87371905	87372004	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:84066680;1allele=G/C;version=Hapmap2;RS=rs129746070;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	87384319	87384418	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:84077973;1allele=A/C;version=Hapmap2;RS=rs277437683;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	87419866	87419965	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:84107730;1allele=A/G;version=Hapmap2;RS=rs277437710;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	87629223	87629322	.	+	.	Name=Plant_height;B73v2_pos=4:84316636;1allele=C/T;version=Hapmap2;RS=rs277438050;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	87673452	87673551	.	+	.	Name=Height_above_ear;B73v2_pos=4:84360189;1allele=C/T;version=Hapmap2;RS=rs814572690;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	87673452	87673551	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:84360189;1allele=C/T;version=Hapmap2;RS=rs814572690;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	87673452	87673551	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:84360189;1allele=C/T;version=Hapmap2;RS=rs814572690;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	87740812	87740911	.	+	.	Name=Plant_height;B73v2_pos=4:84425296;1allele=A/G;version=Hapmap2;RS=rs277438186;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	87756890	87756989	.	+	.	Name=Plant_height;B73v2_pos=4:84441376;1allele=A/G;version=Hapmap2;RS=rs129746573;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	87806134	87806233	.	+	.	Name=Leaf_width;B73v2_pos=4:84490635;1allele=G/T;version=Hapmap2;RS=rs277438250;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	88028546	88028645	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:84693062;1allele=G/A;version=Hapmap2;RS=rs806904582;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	88071241	88071340	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:84735762;1allele=T/G;version=Hapmap2;RS=rs129747239;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	88200507	88200606	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:84860327;1allele=A/G;version=Hapmap2;RS=rs822464315;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	88357334	88357433	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:85012222;1allele=T/A;version=Hapmap2;RS=rs129747978;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	88815728	88815826	.	+	.	Name=Tassel_length;B73v2_pos=4:85377708;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	88934878	88934977	.	+	.	Name=Tassel_length;B73v2_pos=4:85493365;1allele=T/C;version=Hapmap2;RS=rs129749265;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	89012475	89012573	.	+	.	Name=Tassel_length;B73v2_pos=4:85569998;1allele=G/A;version=Hapmap2;RS=rs1060556604;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	89175423	89175522	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:85732543;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	89370846	89370945	.	+	.	Name=Ear_row_number;B73v2_pos=4:85929142;1allele=C/A;version=Hapmap2;RS=rs840732853;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	89449039	89449138	.	+	.	Name=Ear_row_number;B73v2_pos=4:86006674;1allele=T/A;version=Hapmap2;RS=rs847994628;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	90134227	90134326	.	+	.	Name=Leaf_width;B73v2_pos=4:86663002;1allele=C/T;version=Hapmap2;RS=rs841105052;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	90140951	90141050	.	+	.	Name=Leaf_length;B73v2_pos=4:86669724;1allele=C/T;version=Hapmap1;RS=rs131468674;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	90674202	90674301	.	+	.	Name=Sucrose;B73v2_pos=4:87202763;1allele=T/C;version=Hapmap2;RS=rs808020741;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	93682020	93682119	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:90148663;1allele=A/C;version=Hapmap2;RS=rs810657105;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	93984559	93984658	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:90441122;1allele=A/G;version=Hapmap2;RS=rs802198267;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	94368736	94368835	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:90835081;1allele=C/A;version=Hapmap2;RS=rs277448016;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	94393387	94393486	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:90859738;1allele=C/T;version=Hapmap2;RS=rs277448114;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	94675327	94675426	.	+	.	Name=Nitrate;B73v2_pos=4:91129564;1allele=A/G;version=Hapmap2;RS=rs830588740;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	94810020	94810119	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:91261198;1allele=A/G;version=Hapmap2;RS=rs129758109;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	95054884	95054983	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:91505336;1allele=T/C;version=Hapmap2;RS=rs839797396;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	95290054	95290153	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:91668793;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	95303795	95303894	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:91649583;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	95387275	95387374	.	+	.	Name=Ear_row_number;B73v2_pos=4:91853461;1allele=A/C;version=Hapmap2;RS=rs803484755;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	95487581	95487680	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:91942889;1allele=A/C;version=Hapmap2;RS=rs277451529;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	95570680	95570779	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:92026366;1allele=A/G;version=Hapmap2;RS=rs277451897;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	95574435	95574534	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:92030121;1allele=T/C;version=Hapmap2;RS=rs1062689064;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	95574435	95574534	.	+	.	Name=Days_to_silk;B73v2_pos=4:92030121;1allele=T/C;version=Hapmap2;RS=rs1062689064;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	96018450	96018549	.	+	.	Name=Plant_height;B73v2_pos=4:92473820;1allele=G/A;version=Hapmap1;RS=rs131470323;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	97633747	97633846	.	+	.	Name=Sucrose;B73v2_pos=4:94066425;1allele=T/C;version=Hapmap2;RS=rs836116159;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	98596612	98596711	.	+	.	Name=Tassel_length;B73v2_pos=4:95029980;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	99749315	99749414	.	+	.	Name=Ear_row_number;B73v2_pos=4:96202110;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	100260927	100261026	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:96708193;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	100537017	100537116	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:103526100;1allele=A/G;version=Hapmap1;RS=rs129866862;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	103624446	103624545	.	+	.	Name=Sucrose;B73v2_pos=4:100487289;1allele=C/T;version=Hapmap1;RS=rs129865210;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	107258548	107258647	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:220420932;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	112427213	112427312	.	+	.	Name=Tassel_length;B73v2_pos=4:107787353;1allele=A/T;version=Hapmap2;RS=rs129763875;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	112593706	112593805	.	+	.	Name=Tassel_length;B73v2_pos=4:107955802;1allele=T/A;version=Hapmap2;RS=rs129763970;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	114177142	114177241	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:109499505;1allele=T/C;version=Hapmap2;RS=rs129765996;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	114519498	114519597	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:109839902;1allele=T/C;version=Hapmap2;RS=rs840659859;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	115293614	115293713	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:110590809;1allele=T/G;version=Hapmap1;RS=rs129768366;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	115413654	115413753	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:110708928;1allele=A/G;version=Hapmap2;RS=rs819632760;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	116304468	116304567	.	+	.	Name=Nitrate;B73v2_pos=4:111574840;1allele=C/A;version=Hapmap2;RS=rs850188331;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	116337211	116337310	.	+	.	Name=Leaf_width;B73v2_pos=2:100157885;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	116792354	116792453	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:112074825;1allele=G/A;version=Hapmap2;RS=rs831606864;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	116967543	116967642	.	+	.	Name=Sucrose;B73v2_pos=4:112227289;1allele=C/T;version=Hapmap1;RS=rs129771045;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	118573141	118573240	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:113880977;1allele=A/G;version=Hapmap2;RS=rs129773157;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	118632603	118632702	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:113940382;1allele=T/C;version=Hapmap2;RS=rs810126628;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	119679337	119679436	.	+	.	Name=Leaf_width;B73v2_pos=4:114917157;1allele=T/A;version=Hapmap2;RS=rs848312351;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	120999210	120999309	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:116254751;1allele=G/A;version=Hapmap1;RS=rs132128894;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	121925495	121925594	.	+	.	Name=Glutamate;B73v2_pos=4:117174202;1allele=T/A;version=Hapmap2;RS=rs727077295;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	124183179	124183278	.	+	.	Name=Tassel_length;B73v2_pos=4:119395288;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	125126870	125126969	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:120312925;1allele=A/G;version=Hapmap2;RS=rs808822124;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	125151033	125151132	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:120337088;1allele=A/G;version=Hapmap2;RS=rs834785287;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	125152994	125153093	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:120339049;1allele=A/G;version=Hapmap2;RS=rs132130238;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	125184090	125184189	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:120370148;1allele=A/G;version=Hapmap2;RS=rs277477043;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	125195533	125195632	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:120381131;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	125205571	125205670	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:120392412;1allele=A/G;version=Hapmap2;RS=rs844083230;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	125378892	125378991	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:120565303;1allele=G/T;version=Hapmap2;RS=rs1063106744;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	125378892	125378991	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:120565303;1allele=G/T;version=Hapmap2;RS=rs1063106744;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	125384594	125384693	.	+	.	Name=Leaf_length;B73v2_pos=4:120571066;1allele=C/T;version=Hapmap2;RS=rs820899782;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	125629819	125629918	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:120798997;1allele=A/G;version=Hapmap2;RS=rs848283386;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	125936338	125936437	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:121066595;1allele=C/A;version=Hapmap2;RS=rs802028435;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	126036024	126036123	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:121165906;1allele=G/A;version=Hapmap2;RS=rs818616956;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	126059781	126059880	.	+	.	Name=Stalk_strength;B73v2_pos=4:121189825;1allele=A/G;version=Hapmap2;RS=rs841822024;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	126093479	126093578	.	+	.	Name=Glucose;B73v2_pos=4:121221540;1allele=T/C;version=Hapmap2;RS=rs803808259;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	126331684	126331781	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:121454628;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	126335690	126335789	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:121458639;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	127958219	127958318	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:123047971;1allele=G/C;version=Hapmap2;RS=rs1064143156;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	127970867	127970966	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:123060618;1allele=G/A;version=Hapmap2;RS=rs1061806516;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	128220216	128220315	.	+	.	Name=Nitrate;B73v2_pos=4:123305024;1allele=C/A;version=Hapmap2;RS=rs816199599;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	128245833	128245932	.	+	.	Name=Nitrate;B73v2_pos=4:123329527;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	128443724	128443823	.	+	.	Name=Nitrate;B73v2_pos=4:123548383;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	128559632	128559731	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:123660959;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	128566298	128566397	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:123667625;1allele=G/A;version=Hapmap2;RS=rs277483661;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	128747422	128747521	.	+	.	Name=Days_to_silk;B73v2_pos=4:123828398;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	128884287	128884386	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:123988885;1allele=C/T;version=Hapmap2;RS=rs827104845;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	129406644	129406743	.	+	.	Name=Days_to_silk;B73v2_pos=4:124531956;1allele=-/+;version=Hapmap2;RS=rs835256233;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	129518519	129518618	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:124644021;1allele=A/C;version=Hapmap2;RS=rs831753239;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	129563234	129563333	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:124688740;1allele=C/T;version=Hapmap2;RS=rs849323437;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	129915183	129915282	.	+	.	Name=Glucose;B73v2_pos=4:125037916;1allele=T/C;version=Hapmap2;RS=rs808152365;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	129979092	129979191	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:125104313;1allele=A/G;version=Hapmap2;RS=rs277488865;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	129996292	129996391	.	+	.	Name=Leaf_width;B73v2_pos=4:125127781;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	130029372	130029471	.	+	.	Name=Sucrose;B73v2_pos=4:125150029;1allele=C/A;version=Hapmap2;RS=rs812049176;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	130070932	130071031	.	+	.	Name=Ear_height;B73v2_pos=4:125191454;1allele=A/T;version=Hapmap2;RS=rs835501300;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	130153842	130153941	.	+	.	Name=Days_to_silk;B73v2_pos=4:125250572;1allele=A/G;version=Hapmap2;RS=rs277489640;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	130330195	130330294	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:125446355;1allele=A/G;version=Hapmap2;RS=rs806833290;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	130534440	130534539	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:125646675;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	130544573	130544672	.	+	.	Name=Days_to_silk;B73v2_pos=4:125656809;1allele=C/T;version=Hapmap2;RS=rs837579587;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	130898408	130898507	.	+	.	Name=Plant_height;B73v2_pos=4:125986873;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	131120428	131120527	.	+	.	Name=Nitrate;B73v2_pos=4:126204440;1allele=T/C;version=Hapmap2;RS=rs1063198075;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	131197175	131197274	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:126281033;1allele=T/G;version=Hapmap2;RS=rs811625491;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	131219951	131220050	.	+	.	Name=Glucose;B73v2_pos=4:126303814;1allele=G/T;version=Hapmap2;RS=rs843960902;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	131265635	131265734	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:126349523;1allele=C/T;version=Hapmap2;RS=rs817520993;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	131292538	131292637	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:126376429;1allele=G/A;version=Hapmap1;RS=rs132133142;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	131292984	131293083	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:126376875;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	131441585	131441684	.	+	.	Name=Glucose;B73v2_pos=4:126525618;1allele=T/C;version=Hapmap2;RS=rs821573540;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	131716306	131716405	.	+	.	Name=Cob_diameter;B73v2_pos=4:126793618;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	131775951	131776050	.	+	.	Name=Cob_diameter;B73v2_pos=4:126853530;1allele=G/A;version=Hapmap2;RS=rs277493241;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	132609661	132609760	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:127614825;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	132776176	132776275	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:127836818;1allele=-/+;version=Hapmap2;RS=rs835280028;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	133187611	133187710	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:128254767;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	134371496	134371595	.	+	.	Name=Days_to_silk;B73v2_pos=4:129394363;1allele=A/G;version=Hapmap2;RS=rs132134197;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	134536883	134536982	.	+	.	Name=Ear_height;B73v2_pos=4:129553340;1allele=G/A;version=Hapmap2;RS=rs129786609;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	134920744	134920843	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:129948441;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	134954448	134954547	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:129972651;1allele=C/T;version=Hapmap2;RS=rs1060604543;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	134954817	134954916	.	+	.	Name=Sucrose;B73v2_pos=4:129973020;1allele=G/A;version=Hapmap2;RS=rs129787826;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	134963641	134963740	.	+	.	Name=Sucrose;B73v2_pos=4:129981846;1allele=G/A;version=Hapmap2;RS=rs129787923;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	135167531	135167630	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:130186598;1allele=C/G;version=Hapmap2;RS=rs277497072;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	135173475	135173574	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:130192542;1allele=T/C;version=Hapmap2;RS=rs277497149;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	135175614	135175713	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:130194681;1allele=T/C;version=Hapmap2;RS=rs129788359;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	135416844	135416943	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:130430847;1allele=C/G;version=Hapmap2;RS=rs277497678;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	135486862	135486961	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:130501014;1allele=A/G;version=Hapmap2;RS=rs820964825;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	135501085	135501184	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:130515239;1allele=A/C;version=Hapmap2;RS=rs835756608;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	135725748	135725847	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:130742584;1allele=C/T;version=Hapmap2;RS=rs820355400;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	135801630	135801729	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:130826933;1allele=A/G;version=Hapmap2;RS=rs840668346;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	135801638	135801736	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:130826941;1allele=C/A;version=Hapmap2;RS=rs831195194;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	136095570	136095669	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:131134531;1allele=G/A;version=Hapmap2;RS=rs809659272;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	136096566	136096665	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:131135527;1allele=T/C;version=Hapmap2;RS=rs824269851;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	136132667	136132766	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:131170732;1allele=G/A;version=Hapmap2;RS=rs277499535;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	136185364	136185463	.	+	.	Name=Tassel_length;B73v2_pos=4:131224018;1allele=G/C;version=Hapmap2;RS=rs129790918;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	136229812	136229911	.	+	.	Name=Tassel_length;B73v2_pos=4:131251100;1allele=C/T;version=Hapmap2;RS=rs843273231;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	136315412	136315511	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:131354857;1allele=C/T;version=Hapmap2;RS=rs811748642;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	136621767	136621866	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:131663565;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	136643210	136643309	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:131684969;1allele=G/T;version=Hapmap2;RS=rs129792286;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	136726312	136726411	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:131764168;1allele=G/A;version=Hapmap1;RS=rs131178804;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	136741725	136741824	.	+	.	Name=Sucrose;B73v2_pos=4:131779587;1allele=G/A;version=Hapmap2;RS=rs831529808;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	136907816	136907915	.	+	.	Name=Days_to_silk;B73v2_pos=4:131942564;1allele=G/T;version=Hapmap2;RS=rs812273496;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	136976293	136976392	.	+	.	Name=Days_to_silk;B73v2_pos=4:132010548;1allele=G/A;version=Hapmap2;RS=rs827961702;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	136976293	136976392	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:132010548;1allele=G/A;version=Hapmap2;RS=rs827961702;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	137080626	137080725	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:132109276;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	137598287	137598386	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:132604384;1allele=G/T;version=Hapmap2;RS=rs849307009;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	137606424	137606523	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:132612521;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	137606424	137606523	.	+	.	Name=Height_above_ear;B73v2_pos=4:132612521;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	137606424	137606523	.	+	.	Name=Plant_height;B73v2_pos=4:132612521;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	137606433	137606532	.	+	.	Name=Plant_height;B73v2_pos=4:132612530;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	137858808	137858907	.	+	.	Name=Glucose;B73v2_pos=4:132864282;1allele=C/T;version=Hapmap2;RS=rs802348186;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	138061613	138061712	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:133033971;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	138716971	138717070	.	+	.	Name=Plant_height;B73v2_pos=4:133718878;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	138963068	138963167	.	+	.	Name=Ear_height;B73v2_pos=4:133930620;1allele=C/A;version=Hapmap2;RS=rs132136118;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	138964669	138964768	.	+	.	Name=Ear_height;B73v2_pos=4:133932221;1allele=C/T;version=Hapmap2;RS=rs1064240974;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	139046086	139046185	.	+	.	Name=Ear_height;B73v2_pos=4:134007988;1allele=G/T;version=Hapmap2;RS=rs129795727;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	139219199	139219298	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:134173252;1allele=A/C;version=Hapmap2;RS=rs844944076;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	140179359	140179458	.	+	.	Name=Leaf_length;B73v2_pos=4:135034476;1allele=T/C;version=Hapmap2;RS=rs841555728;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	140279014	140279113	.	+	.	Name=Tassel_length;B73v2_pos=4:135203548;1allele=C/T;version=Hapmap2;RS=rs846239412;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	140612310	140612409	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:135540252;1allele=C/T;version=Hapmap2;RS=rs1064265674;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	140756536	140756635	.	+	.	Name=Fructose;B73v2_pos=4:135649242;1allele=C/T;version=Hapmap2;RS=rs835127163;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	141151123	141151222	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:136066274;1allele=C/G;version=Hapmap2;RS=rs818769522;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	141151785	141151884	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:136066936;1allele=C/G;version=Hapmap2;RS=rs132137052;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	141151811	141151910	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:136066962;1allele=A/C;version=Hapmap1;RS=rs129799832;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	141151957	141152056	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:136067108;1allele=T/G;version=Hapmap2;RS=rs277506007;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	141261010	141261109	.	+	.	Name=Tassel_length;B73v2_pos=4:136175745;1allele=C/T;version=Hapmap2;RS=rs277506206;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	141264698	141264797	.	+	.	Name=Tassel_length;B73v2_pos=4:136179433;1allele=C/T;version=Hapmap2;RS=rs823560346;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	141451702	141451801	.	+	.	Name=Tassel_length;B73v2_pos=4:136366903;1allele=G/A;version=Hapmap2;RS=rs277506376;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	141461440	141461539	.	+	.	Name=Leaf_length;B73v2_pos=4:136376643;1allele=T/C;version=Hapmap2;RS=rs803549949;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	142052776	142052875	.	+	.	Name=Tassel_length;B73v2_pos=4:136961033;1allele=A/G;version=Hapmap2;RS=rs1061777131;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	142057718	142057817	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:136965978;1allele=C/A;version=Hapmap2;RS=rs802169757;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	142769126	142769225	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:137672573;1allele=T/A;version=Hapmap2;RS=rs808173842;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	143003355	143003454	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:137897636;1allele=C/T;version=Hapmap2;RS=rs825020276;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	143270900	143270999	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:138155350;1allele=A/G;version=Hapmap1;RS=rs132137998;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	143304238	143304337	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:138188692;1allele=A/G;version=Hapmap2;RS=rs846833211;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	143738570	143738669	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:138617877;1allele=A/G;version=Hapmap2;RS=rs850124779;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	144661472	144661571	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:139510419;1allele=A/T;version=Hapmap2;RS=rs804153675;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	145032776	145032875	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:139871925;1allele=C/T;version=Hapmap1;RS=rs129802833;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	145170028	145170127	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:140010378;1allele=C/T;version=Hapmap2;RS=rs277510891;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	145170028	145170127	.	+	.	Name=Days_to_silk;B73v2_pos=4:140010378;1allele=C/T;version=Hapmap2;RS=rs277510891;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	145350631	145350730	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:140188476;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	145607177	145607276	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:140478300;1allele=T/C;version=Hapmap2;RS=rs834574556;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	145642616	145642715	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:140514594;1allele=G/A;version=Hapmap2;RS=rs830710320;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	145799123	145799222	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:140670469;1allele=G/A;version=Hapmap2;RS=rs840034670;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	145970712	145970811	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:140835414;1allele=T/A;version=Hapmap2;RS=rs829931837;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	145998301	145998400	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:140877938;1allele=+/-;version=Hapmap2;RS=rs817480033;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	146203817	146203916	.	+	.	Name=Leaf_width;B73v2_pos=4:141090250;1allele=C/A;version=Hapmap1;RS=rs132138840;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	146338758	146338857	.	+	.	Name=Days_to_silk;B73v2_pos=4:141219569;1allele=T/C;version=Hapmap2;RS=rs1062359951;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	146654024	146654123	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:141531257;1allele=T/C;version=Hapmap2;RS=rs809465602;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	146903095	146903194	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:141651473;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	147413504	147413603	.	+	.	Name=Leaf_length;B73v2_pos=4:142248057;1allele=T/A;version=Hapmap2;RS=rs840328322;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	147673166	147673265	.	+	.	Name=Ear_row_number;B73v2_pos=4:142508951;1allele=C/T;version=Hapmap2;RS=rs850273501;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	148148772	148148871	.	+	.	Name=Leaf_length;B73v2_pos=4:142971499;1allele=A/G;version=Hapmap2;RS=rs834870230;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	148188681	148188780	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:143011412;1allele=G/T;version=Hapmap2;RS=rs724536615;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	148242427	148242526	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:143074333;1allele=A/G;version=Hapmap2;RS=rs835099153;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	148249547	148249646	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:143081453;1allele=C/G;version=Hapmap1;RS=rs132140238;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	148450137	148450236	.	+	.	Name=Starch;B73v2_pos=4:143277256;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	148521538	148521637	.	+	.	Name=Leaf_length;B73v2_pos=4:143346950;1allele=A/G;version=Hapmap2;RS=rs847024281;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	148523671	148523770	.	+	.	Name=Leaf_length;B73v2_pos=4:143349083;1allele=A/C;version=Hapmap2;RS=rs839890732;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	148551296	148551395	.	+	.	Name=Glucose;B73v2_pos=4:143376709;1allele=G/T;version=Hapmap2;RS=rs724558088;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	148587062	148587161	.	+	.	Name=Sucrose;B73v2_pos=4:143412478;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	148632639	148632738	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:143458368;1allele=T/G;version=Hapmap2;RS=rs277518710;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	148919713	148919812	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:143769900;1allele=A/G;version=Hapmap2;RS=rs832327898;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	148925760	148925859	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:143775947;1allele=A/G;version=Hapmap2;RS=rs849776253;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	148926613	148926712	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:143776800;1allele=G/A;version=Hapmap2;RS=rs813460315;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	148944271	148944370	.	+	.	Name=Tassel_length;B73v2_pos=4:143794460;1allele=C/T;version=Hapmap2;RS=rs1061573970;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	148951741	148951840	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:143801931;1allele=G/A;version=Hapmap2;RS=rs808395875;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	148980031	148980130	.	+	.	Name=Sucrose;B73v2_pos=4:143830224;1allele=G/A;version=Hapmap2;RS=rs132140953;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	149014904	149015003	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:143865100;1allele=T/G;version=Hapmap1;RS=rs129807476;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	149037793	149037892	.	+	.	Name=Nitrate;B73v2_pos=4:143887989;1allele=G/A;version=Hapmap2;RS=rs837375676;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	149053251	149053350	.	+	.	Name=Ear_height;B73v2_pos=4:143903447;1allele=G/A;version=Hapmap2;RS=rs129807523;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	149128551	149128650	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:143977624;1allele=G/T;version=Hapmap2;RS=rs822976308;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	149293534	149293633	.	+	.	Name=Tassel_length;B73v2_pos=4:144141091;1allele=G/A;version=Hapmap2;RS=rs826896830;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	149454095	149454194	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:144302065;1allele=T/C;version=Hapmap2;RS=rs807860914;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	149462419	149462518	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:144310388;1allele=T/A;version=Hapmap2;RS=rs846269290;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	149493550	149493649	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:144341673;1allele=T/C;version=Hapmap2;RS=rs815389539;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	149603102	149603201	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:144445995;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	149603110	149603209	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:144446003;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	149630040	149630139	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:144462104;1allele=A/G;version=Hapmap2;RS=rs841357677;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	149656118	149656217	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:144501674;1allele=T/C;version=Hapmap2;RS=rs840431329;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	149739594	149739693	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:144585333;1allele=A/G;version=Hapmap2;RS=rs815167720;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	149740926	149741025	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:144586665;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	149750873	149750972	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:144596207;1allele=C/G;version=Hapmap2;RS=rs802545909;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	149981189	149981288	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:144835660;1allele=T/C;version=Hapmap2;RS=rs802849291;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	150082268	150082367	.	+	.	Name=Stalk_strength;B73v2_pos=4:144919772;1allele=C/T;version=Hapmap2;RS=rs129808773;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	150514454	150514553	.	+	.	Name=Plant_height;B73v2_pos=4:145322331;1allele=C/G;version=Hapmap1;RS=rs132141771;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	150530346	150530445	.	+	.	Name=Sucrose;B73v2_pos=4:145338225;1allele=C/T;version=Hapmap2;RS=rs848142430;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	150549814	150549913	.	+	.	Name=Nitrate;B73v2_pos=4:145357692;1allele=G/A;version=Hapmap2;RS=rs827259358;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	150561512	150561611	.	+	.	Name=Nitrate;B73v2_pos=4:145369393;1allele=T/C;version=Hapmap2;RS=rs821946806;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	150583910	150584009	.	+	.	Name=Sucrose;B73v2_pos=4:145391796;1allele=T/A;version=Hapmap2;RS=rs725855990;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	150633093	150633192	.	+	.	Name=Sucrose;B73v2_pos=4:145440845;1allele=A/G;version=Hapmap2;RS=rs277520894;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	150648894	150648993	.	+	.	Name=Nitrate;B73v2_pos=4:145456648;1allele=G/A;version=Hapmap2;RS=rs841068204;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	150653480	150653579	.	+	.	Name=Nitrate;B73v2_pos=4:145461234;1allele=T/C;version=Hapmap2;RS=rs850001507;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	150753163	150753262	.	+	.	Name=Fructose;B73v2_pos=4:145561724;1allele=T/A;version=Hapmap2;RS=rs277521142;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	150754357	150754456	.	+	.	Name=Nitrate;B73v2_pos=4:145562921;1allele=G/C;version=Hapmap2;RS=rs824250483;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	150778893	150778992	.	+	.	Name=Sucrose;B73v2_pos=4:145587457;1allele=G/A;version=Hapmap2;RS=rs816330481;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	150801612	150801711	.	+	.	Name=Nitrate;B73v2_pos=4:145610204;1allele=G/A;version=Hapmap2;RS=rs828170780;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	150807816	150807915	.	+	.	Name=Nitrate;B73v2_pos=4:145616408;1allele=G/C;version=Hapmap2;RS=rs845468981;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	150818085	150818184	.	+	.	Name=Nitrate;B73v2_pos=4:145626677;1allele=G/A;version=Hapmap2;RS=rs833172499;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	150919226	150919325	.	+	.	Name=Nitrate;B73v2_pos=4:145724937;1allele=G/A;version=Hapmap2;RS=rs847881312;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	151004974	151005073	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:145811359;1allele=C/G;version=Hapmap2;RS=rs844655111;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	151013644	151013743	.	+	.	Name=Glucose;B73v2_pos=4:145820027;1allele=A/G;version=Hapmap2;RS=rs129810150;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	151013656	151013755	.	+	.	Name=Glucose;B73v2_pos=4:145820039;1allele=A/T;version=Hapmap2;RS=rs845052805;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	151061925	151062024	.	+	.	Name=Glucose;B73v2_pos=4:145868320;1allele=A/G;version=Hapmap2;RS=rs129810189;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	151061932	151062031	.	+	.	Name=Glucose;B73v2_pos=4:145868327;1allele=T/A;version=Hapmap2;RS=rs847625283;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	151069053	151069152	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:145875448;1allele=A/C;version=Hapmap2;RS=rs849346446;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	151080034	151080133	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:145886429;1allele=A/G;version=Hapmap2;RS=rs806571667;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	151106726	151106825	.	+	.	Name=Tassel_length;B73v2_pos=4:145913225;1allele=C/A;version=Hapmap2;RS=rs129810312;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	151178126	151178225	.	+	.	Name=Days_to_silk;B73v2_pos=4:145984739;1allele=G/A;version=Hapmap2;RS=rs849802333;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	151179129	151179228	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:145985742;1allele=G/T;version=Hapmap2;RS=rs812695977;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	151186146	151186245	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:145992759;1allele=G/A;version=Hapmap2;RS=rs815328145;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	151195237	151195336	.	+	.	Name=Ear_height;B73v2_pos=4:146001954;1allele=C/T;version=Hapmap2;RS=rs832541153;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	151195538	151195637	.	+	.	Name=Ear_height;B73v2_pos=4:146002255;1allele=T/C;version=Hapmap2;RS=rs846381224;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	151195689	151195788	.	+	.	Name=Sucrose;B73v2_pos=4:146002406;1allele=G/T;version=Hapmap2;RS=rs837094116;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	151200381	151200480	.	+	.	Name=Plant_height;B73v2_pos=4:146007098;1allele=A/G;version=Hapmap2;RS=rs839959244;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	151237196	151237295	.	+	.	Name=Leaf_length;B73v2_pos=4:146041647;1allele=A/T;version=Hapmap2;RS=rs808807059;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	151311018	151311117	.	+	.	Name=Tassel_length;B73v2_pos=4:146114541;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	151313051	151313150	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:146116574;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	151335359	151335458	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:146133941;1allele=G/T;version=Hapmap2;RS=rs840305173;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	151337408	151337507	.	+	.	Name=Days_to_silk;B73v2_pos=4:146135990;1allele=A/C;version=Hapmap1;RS=rs132142248;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	151493020	151493119	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:146288867;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	151560519	151560618	.	+	.	Name=Tassel_length;B73v2_pos=4:146356650;1allele=C/A;version=Hapmap1;RS=rs129811226;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	151883318	151883417	.	+	.	Name=Nitrate;B73v2_pos=4:146677889;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152144035	152144134	.	+	.	Name=Stalk_strength;B73v2_pos=4:146936792;1allele=T/C;version=Hapmap2;RS=rs810926106;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	152185255	152185354	.	+	.	Name=Stalk_strength;B73v2_pos=4:146976851;1allele=G/A;version=Hapmap2;RS=rs277524152;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	152193823	152193922	.	+	.	Name=Sucrose;B73v2_pos=4:146985419;1allele=A/G;version=Hapmap2;RS=rs844876619;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	152206452	152206551	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:146998049;1allele=C/T;version=Hapmap2;RS=rs823059062;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	152207865	152207964	.	+	.	Name=Sucrose;B73v2_pos=4:146999462;1allele=T/C;version=Hapmap2;RS=rs277524263;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	152249936	152250035	.	+	.	Name=Sucrose;B73v2_pos=4:147041536;1allele=C/A;version=Hapmap2;RS=rs838277847;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	152278765	152278864	.	+	.	Name=Stalk_strength;B73v2_pos=4:147069835;1allele=T/A;version=Hapmap2;RS=rs820222677;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	152283839	152283938	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:147074909;1allele=T/C;version=Hapmap2;RS=rs830752664;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	152285706	152285805	.	+	.	Name=Plant_height;B73v2_pos=4:147076776;1allele=T/C;version=Hapmap2;RS=rs812731570;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	152298279	152298378	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:147089349;1allele=A/G;version=Hapmap2;RS=rs844902568;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	152298283	152298382	.	+	.	Name=Plant_height;B73v2_pos=4:147089353;1allele=T/C;version=Hapmap2;RS=rs808243474;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	152299479	152299578	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:147090549;1allele=A/T;version=Hapmap2;RS=rs277524637;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	152299526	152299625	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:147090596;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152300266	152300365	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:147091336;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152308172	152308271	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:147099242;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152311302	152311401	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:147102372;1allele=C/A;version=Hapmap2;RS=rs842948637;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	152320746	152320845	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:147110744;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152329899	152329996	.	+	.	Name=Plant_height;B73v2_pos=4:147119898;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152331126	152331225	.	+	.	Name=Leaf_width;B73v2_pos=4:147121320;1allele=G/A;version=Hapmap2;RS=rs724248638;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	152331352	152331451	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:147121546;1allele=A/G;version=Hapmap2;RS=rs277524694;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	152351835	152351934	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:147142032;1allele=T/C;version=Hapmap2;RS=rs809639274;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	152354370	152354469	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:147144568;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152357153	152357252	.	+	.	Name=Nitrate;B73v2_pos=4:147147350;1allele=G/A;version=Hapmap2;RS=rs804751702;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	152388819	152388918	.	+	.	Name=Leaf_length;B73v2_pos=4:147178512;1allele=T/A;version=Hapmap2;RS=rs830908151;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	152394787	152394886	.	+	.	Name=Nitrate;B73v2_pos=4:147184484;1allele=T/A;version=Hapmap2;RS=rs812970915;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	152400863	152400962	.	+	.	Name=Stalk_strength;B73v2_pos=4:147225764;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152461692	152461791	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:147250822;1allele=C/T;version=Hapmap2;RS=rs817364901;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	152461729	152461828	.	+	.	Name=Nitrate;B73v2_pos=4:147250859;1allele=G/A;version=Hapmap2;RS=rs845601132;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	152901901	152902000	.	+	.	Name=Leaf_width;B73v2_pos=4:147744028;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152904327	152904426	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:147741599;1allele=C/G;version=Hapmap2;RS=rs830725241;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	152913084	152913183	.	+	.	Name=Sucrose;B73v2_pos=4:147693358;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152958009	152958108	.	+	.	Name=Plant_height;B73v2_pos=4:147704610;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	152965512	152965611	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:147723698;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	153012684	153012783	.	+	.	Name=Stalk_strength;B73v2_pos=4:147785360;1allele=A/C;version=Hapmap2;RS=rs819283463;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	153022686	153022785	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:147795364;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	153024465	153024564	.	+	.	Name=Leaf_width;B73v2_pos=4:147797143;1allele=A/G;version=Hapmap2;RS=rs822441953;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	153271085	153271184	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:148045024;1allele=C/T;version=Hapmap2;RS=rs847977939;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	153294822	153294921	.	+	.	Name=Nitrate;B73v2_pos=4:148068762;1allele=A/G;version=Hapmap2;RS=rs805576317;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	153492314	153492413	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:148246750;1allele=C/T;version=Hapmap2;RS=rs836115533;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	153582684	153582783	.	+	.	Name=Stalk_strength;B73v2_pos=4:148349515;1allele=T/C;version=Hapmap2;RS=rs820022678;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	153631501	153631600	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:148398331;1allele=A/G;version=Hapmap2;RS=rs129814758;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	153788462	153788561	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:148554717;1allele=A/G;version=Hapmap2;RS=rs811589752;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	154006740	154006839	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:148772858;1allele=C/T;version=Hapmap2;RS=rs843444724;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	154166507	154166606	.	+	.	Name=Stalk_strength;B73v2_pos=4:148983166;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	154193550	154193649	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:148956861;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	154407348	154407447	.	+	.	Name=Tassel_length;B73v2_pos=4:149182636;1allele=T/C;version=Hapmap2;RS=rs1062043868;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	154839204	154839303	.	+	.	Name=Ear_height;B73v2_pos=4:149570152;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	154859027	154859126	.	+	.	Name=Sucrose;B73v2_pos=4:149550329;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	155193510	155193609	.	+	.	Name=Tassel_length;B73v2_pos=4:149902336;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	155198551	155198650	.	+	.	Name=Tassel_length;B73v2_pos=4:149897295;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	155290278	155290377	.	+	.	Name=Plant_height;B73v2_pos=4:150017196;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	155304686	155304785	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:150031606;1allele=G/T;version=Hapmap1;RS=rs132143928;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	155397581	155397680	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:150125616;1allele=C/T;version=Hapmap2;RS=rs840881047;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	155690313	155690412	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:150405801;1allele=G/A;version=Hapmap2;RS=rs822427470;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	155691841	155691940	.	+	.	Name=Leaf_width;B73v2_pos=4:150407320;1allele=A/G;version=Hapmap2;RS=rs826100045;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	155748395	155748494	.	+	.	Name=Tassel_length;B73v2_pos=4:150463560;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	155754121	155754220	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:150469286;1allele=C/T;version=Hapmap2;RS=rs826559365;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	155906821	155906920	.	+	.	Name=Stalk_strength;B73v2_pos=4:150579041;1allele=G/T;version=Hapmap2;RS=rs1063022807;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	156039251	156039350	.	+	.	Name=Stalk_strength;B73v2_pos=4:150744470;1allele=G/A;version=Hapmap2;RS=rs833028025;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	156050918	156051017	.	+	.	Name=Ear_height;B73v2_pos=4:150756139;1allele=C/T;version=Hapmap2;RS=rs1060520656;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	156306166	156306265	.	+	.	Name=Leaf_length;B73v2_pos=4:150979355;1allele=C/T;version=Hapmap2;RS=rs845645031;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	156466067	156466166	.	+	.	Name=Stalk_strength;B73v2_pos=4:151135607;1allele=T/C;version=Hapmap2;RS=rs826678519;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	156739755	156739854	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:151408755;1allele=T/C;version=Hapmap2;RS=rs843728351;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	156757157	156757256	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:151426263;1allele=T/C;version=Hapmap2;RS=rs848567857;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	156914495	156914594	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:151584615;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	156931559	156931658	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:151601585;1allele=C/T;version=Hapmap2;RS=rs1061642040;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	157015182	157015281	.	+	.	Name=Height_above_ear;B73v2_pos=4:151684800;1allele=G/C;version=Hapmap2;RS=rs129819691;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	157048230	157048329	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:151716125;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	157049134	157049233	.	+	.	Name=Plant_height;B73v2_pos=4:151717029;1allele=A/T;version=Hapmap2;RS=rs813667849;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	157063967	157064066	.	+	.	Name=Tassel_length;B73v2_pos=4:151734929;1allele=C/T;version=Hapmap2;RS=rs277529592;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	157263338	157263437	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:151929580;1allele=C/A;version=Hapmap2;RS=rs833667898;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	157264286	157264385	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:151930528;1allele=T/C;version=Hapmap2;RS=rs804274385;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	157264967	157265066	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:151931209;1allele=T/C;version=Hapmap2;RS=rs826486672;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	157311443	157311542	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:151977531;1allele=A/C;version=Hapmap2;RS=rs827578181;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	157516029	157516128	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:152152960;1allele=C/T;version=Hapmap2;RS=rs277530188;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	157763558	157763657	.	+	.	Name=Ear_height;B73v2_pos=4:152407674;1allele=C/T;version=Hapmap2;RS=rs277530440;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	157763558	157763657	.	+	.	Name=Plant_height;B73v2_pos=4:152407674;1allele=C/T;version=Hapmap2;RS=rs277530440;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	157792007	157792106	.	+	.	Name=Leaf_length;B73v2_pos=4:152436123;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	157799302	157799401	.	+	.	Name=Plant_height;B73v2_pos=4:152443418;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	157837209	157837308	.	+	.	Name=Plant_height;B73v2_pos=4:152469938;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	157851678	157851777	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:152485114;1allele=G/A;version=Hapmap2;RS=rs801752107;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	157851678	157851777	.	+	.	Name=Height_above_ear;B73v2_pos=4:152485114;1allele=G/A;version=Hapmap2;RS=rs801752107;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	157875008	157875107	.	+	.	Name=Plant_height;B73v2_pos=4:152508012;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	157875008	157875107	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:152508012;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	157949327	157949426	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:152584098;1allele=G/T;version=Hapmap2;RS=rs844259479;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	157959974	157960073	.	+	.	Name=Plant_height;B73v2_pos=4:152594741;1allele=T/A;version=Hapmap2;RS=rs726965085;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	157963262	157963361	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:152598029;1allele=C/T;version=Hapmap2;RS=rs828795032;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158030956	158031055	.	+	.	Name=Stalk_strength;B73v2_pos=4:152656347;1allele=G/A;version=Hapmap2;RS=rs844224829;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	158118505	158118604	.	+	.	Name=Plant_height;B73v2_pos=4:152743209;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	158131739	158131838	.	+	.	Name=Plant_height;B73v2_pos=4:152756132;1allele=C/T;version=Hapmap2;RS=rs129821449;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	158131739	158131838	.	+	.	Name=Ear_height;B73v2_pos=4:152756132;1allele=C/T;version=Hapmap2;RS=rs129821449;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	158166415	158166514	.	+	.	Name=Plant_height;B73v2_pos=4:152786807;1allele=T/C;version=Hapmap2;RS=rs129821543;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158213955	158214054	.	+	.	Name=Plant_height;B73v2_pos=4:152835292;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	158213972	158214071	.	+	.	Name=Plant_height;B73v2_pos=4:152835309;1allele=T/C;version=Hapmap2;RS=rs129821562;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158269504	158269603	.	+	.	Name=Plant_height;B73v2_pos=4:152890495;1allele=A/G;version=Hapmap2;RS=rs132146073;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	158269610	158269709	.	+	.	Name=Plant_height;B73v2_pos=4:152890601;1allele=A/T;version=Hapmap2;RS=rs132146074;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	158269684	158269783	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:152890675;1allele=T/A;version=Hapmap2;RS=rs277531035;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	158269723	158269822	.	+	.	Name=Plant_height;B73v2_pos=4:152890714;1allele=T/A;version=Hapmap1;RS=rs132146076;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	158322765	158322864	.	+	.	Name=Height_above_ear;B73v2_pos=4:152943753;1allele=C/G;version=Hapmap1;RS=rs132146144;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158324380	158324479	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:152945366;1allele=T/C;version=Hapmap2;RS=rs129821767;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	158361294	158361393	.	+	.	Name=Nitrate;B73v2_pos=4:152976094;1allele=A/C;version=Hapmap2;RS=rs831627991;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	158369648	158369747	.	+	.	Name=Plant_height;B73v2_pos=4:152984448;1allele=A/C;version=Hapmap2;RS=rs835899856;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	158434053	158434152	.	+	.	Name=Plant_height;B73v2_pos=4:153046174;1allele=C/T;version=Hapmap2;RS=rs129821922;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158497447	158497546	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153115796;1allele=T/G;version=Hapmap2;RS=rs844811939;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	158514134	158514233	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153132577;1allele=T/A;version=Hapmap2;RS=rs838929934;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	158554750	158554849	.	+	.	Name=Stalk_strength;B73v2_pos=4:153173731;1allele=C/A;version=Hapmap2;RS=rs277531479;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158573901	158574000	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153197462;1allele=A/C;version=Hapmap2;RS=rs129822241;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	158574699	158574798	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153198260;1allele=C/G;version=Hapmap1;RS=rs129822247;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158577576	158577675	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153201137;1allele=A/G;version=Hapmap2;RS=rs1061077934;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	158597791	158597890	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153214652;1allele=G/T;version=Hapmap2;RS=rs129822288;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	158637910	158638010	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153255744;1allele=C/G;version=Hapmap2;RS=rs132146318;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	158638065	158638164	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153255898;1allele=G/T;version=Hapmap1;RS=rs132146319;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	158638988	158639087	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153256821;1allele=T/C;version=Hapmap2;RS=rs830173677;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	158638997	158639096	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153256830;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	158645464	158645563	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:153263821;1allele=G/A;version=Hapmap2;RS=rs1064292705;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	158665796	158665895	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:153284154;1allele=A/C;version=Hapmap2;RS=rs1063081065;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	158700048	158700147	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:153318407;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	158706124	158706223	.	+	.	Name=Stalk_strength;B73v2_pos=4:153324483;1allele=C/T;version=Hapmap2;RS=rs842177872;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	158711310	158711409	.	+	.	Name=Leaf_length;B73v2_pos=4:153329670;1allele=T/G;version=Hapmap2;RS=rs839419687;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	158735065	158735164	.	+	.	Name=Stalk_strength;B73v2_pos=4:153353428;1allele=C/A;version=Hapmap2;RS=rs805957134;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	158852288	158852387	.	+	.	Name=Plant_height;B73v2_pos=4:153470458;1allele=G/A;version=Hapmap2;RS=rs827797434;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	158895235	158895334	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153506601;1allele=G/A;version=Hapmap2;RS=rs820714652;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	158897648	158897747	.	+	.	Name=Plant_height;B73v2_pos=4:153509014;1allele=A/G;version=Hapmap2;RS=rs811950847;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	158909541	158909640	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:153521001;1allele=C/A;version=Hapmap2;RS=rs132146592;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	158923725	158923824	.	+	.	Name=Stalk_strength;B73v2_pos=4:153535185;1allele=G/A;version=Hapmap2;RS=rs727465478;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	158925023	158925122	.	+	.	Name=Height_above_ear;B73v2_pos=4:153536475;1allele=G/C;version=Hapmap2;RS=rs132146666;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	158939746	158939845	.	+	.	Name=Plant_height;B73v2_pos=4:153569584;1allele=C/T;version=Hapmap2;RS=rs277532357;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	158960693	158960792	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153580670;1allele=C/A;version=Hapmap2;RS=rs277532368;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	159009221	159009320	.	+	.	Name=Leaf_length;B73v2_pos=4:153631245;1allele=A/C;version=Hapmap1;RS=rs132146735;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	159036929	159037028	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153658953;1allele=T/C;version=Hapmap2;RS=rs822211080;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	159066203	159066302	.	+	.	Name=Plant_height;B73v2_pos=4:153687907;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159186398	159186497	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:153813546;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159229496	159229595	.	+	.	Name=Leaf_length;B73v2_pos=4:153847199;1allele=G/C;version=Hapmap1;RS=rs132146966;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	159412519	159412618	.	+	.	Name=Fructose;B73v2_pos=4:154046053;1allele=C/A;version=Hapmap2;RS=rs129823867;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	159453896	159453995	.	+	.	Name=Nitrate;B73v2_pos=4:154093246;1allele=C/T;version=Hapmap2;RS=rs844659459;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	159455418	159455517	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154094768;1allele=T/C;version=Hapmap1;RS=rs132147068;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	159456313	159456412	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154095663;1allele=T/C;version=Hapmap2;RS=rs1064736950;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	159456456	159456555	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154095806;1allele=C/A;version=Hapmap2;RS=rs277533078;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	159456544	159456643	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154095894;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159456555	159456654	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154095905;1allele=C/T;version=Hapmap2;RS=rs809729070;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	159457757	159457856	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154097107;1allele=G/A;version=Hapmap2;RS=rs277533112;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	159457997	159458096	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154097347;1allele=G/T;version=Hapmap2;RS=rs836240636;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	159467378	159467477	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154106732;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159470492	159470591	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154109846;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159470603	159470702	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154109957;1allele=C/T;version=Hapmap2;RS=rs831153606;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	159470642	159470741	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154109996;1allele=G/T;version=Hapmap2;RS=rs277533138;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	159484067	159484166	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154123421;1allele=G/C;version=Hapmap2;RS=rs825381394;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	159594056	159594155	.	+	.	Name=Nitrate;B73v2_pos=4:154231859;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159631844	159631943	.	+	.	Name=Tassel_length;B73v2_pos=4:154264609;1allele=C/G;version=Hapmap2;RS=rs129824009;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	159682728	159682827	.	+	.	Name=Plant_height;B73v2_pos=4:154315497;1allele=G/A;version=Hapmap2;RS=rs277533256;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	159684450	159684549	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:154317219;1allele=A/G;version=Hapmap2;RS=rs1062320284;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	159684450	159684549	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:154317219;1allele=A/G;version=Hapmap2;RS=rs1062320284;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	159686930	159687029	.	+	.	Name=Plant_height;B73v2_pos=4:154319699;1allele=T/G;version=Hapmap2;RS=rs1060801805;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	159686930	159687029	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154319699;1allele=T/G;version=Hapmap2;RS=rs1060801805;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	159691808	159691907	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:154324580;1allele=A/G;version=Hapmap2;RS=rs1061581607;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	159702392	159702491	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154335175;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159716439	159716538	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:154342229;1allele=C/A;version=Hapmap2;RS=rs1062286615;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	159720402	159720501	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154353205;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159723843	159723942	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154356646;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159725712	159725811	.	+	.	Name=Plant_height;B73v2_pos=4:154358515;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159730944	159731043	.	+	.	Name=Plant_height;B73v2_pos=4:154364672;1allele=C/A;version=Hapmap2;RS=rs277533304;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	159740561	159740660	.	+	.	Name=Plant_height;B73v2_pos=4:154373131;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159751524	159751622	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154489667;1allele=A/G;version=Hapmap2;RS=rs1063622342;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	159752356	159752455	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154488834;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159756088	159756187	.	+	.	Name=Plant_height;B73v2_pos=4:154463572;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159768357	159768456	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154512085;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159782806	159782905	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154454362;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159783906	159784005	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:154453262;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159797452	159797551	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:154439715;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159798448	159798547	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:154438719;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159819255	159819354	.	+	.	Name=Plant_height;B73v2_pos=4:154432370;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159819311	159819410	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:154432314;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159865324	159865423	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154385547;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159866049	159866148	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154384822;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	159870299	159870398	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:154380571;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	160057132	160057231	.	+	.	Name=Stalk_strength;B73v2_pos=4:154688945;1allele=C/T;version=Hapmap2;RS=rs129824384;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	160132444	160132543	.	+	.	Name=Stalk_strength;B73v2_pos=4:154792551;1allele=G/A;version=Hapmap2;RS=rs844184108;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	160179082	160179181	.	+	.	Name=Stalk_strength;B73v2_pos=4:154847009;1allele=G/A;version=Hapmap2;RS=rs1062889502;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	160204229	160204328	.	+	.	Name=Stalk_strength;B73v2_pos=4:154877116;1allele=G/A;version=Hapmap2;RS=rs827564185;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	160253357	160253456	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:154924808;1allele=C/T;version=Hapmap2;RS=rs129824771;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	160316686	160316785	.	+	.	Name=Stalk_strength;B73v2_pos=4:154985968;1allele=T/G;version=Hapmap2;RS=rs828567858;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	160345076	160345175	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:155014358;1allele=/GC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	160348140	160348239	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:155017422;1allele=G/-;version=Hapmap1;RS=rs132147805;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	160377781	160377880	.	+	.	Name=Plant_height;B73v2_pos=4:155131469;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	160377781	160377880	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155131469;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	160378014	160378113	.	+	.	Name=Height_above_ear;B73v2_pos=4:155131702;1allele=A/G;version=Hapmap2;RS=rs277533941;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	160380283	160380382	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155133971;1allele=A/G;version=Hapmap2;RS=rs277533957;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	160382055	160382154	.	+	.	Name=Leaf_length;B73v2_pos=4:155135743;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	160537275	160537374	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155225491;1allele=C/T;version=Hapmap2;RS=rs277534174;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	160537440	160537539	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155225656;1allele=A/G;version=Hapmap2;RS=rs801927143;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	160537593	160537692	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155225809;1allele=C/G;version=Hapmap2;RS=rs277534186;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	160537593	160537692	.	+	.	Name=Plant_height;B73v2_pos=4:155225809;1allele=C/G;version=Hapmap2;RS=rs277534186;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	160540745	160540844	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155228961;1allele=G/A;version=Hapmap2;RS=rs131185655;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	160542357	160542456	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155230573;1allele=C/T;version=Hapmap2;RS=rs129825349;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	160542357	160542456	.	+	.	Name=Plant_height;B73v2_pos=4:155230573;1allele=C/T;version=Hapmap2;RS=rs129825349;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	160614258	160614357	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155294959;1allele=GAC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	160617379	160617478	.	+	.	Name=Tassel_length;B73v2_pos=4:155298080;1allele=T/G;version=Hapmap2;RS=rs806659583;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	160634428	160634527	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155315131;1allele=A/G;version=Hapmap1;RS=rs129825433;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	160635129	160635228	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:155315832;1allele=G/C;version=Hapmap2;RS=rs725256736;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	160635458	160635557	.	+	.	Name=Height_above_ear;B73v2_pos=4:155316161;1allele=A/G;version=Hapmap2;RS=rs277534289;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	160636239	160636338	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:155316942;1allele=A/T;version=Hapmap2;RS=rs277534304;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	160636371	160636470	.	+	.	Name=Height_above_ear;B73v2_pos=4:155317074;1allele=C/T;version=Hapmap2;RS=rs277534307;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	160642931	160643030	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:155323637;1allele=C/T;version=Hapmap2;RS=rs1061516678;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	160726629	160726728	.	+	.	Name=Plant_height;B73v2_pos=4:155424536;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	160793404	160793503	.	+	.	Name=Tassel_length;B73v2_pos=4:155457623;1allele=G/A;version=Hapmap2;RS=rs833287863;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	160834382	160834481	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:155525769;1allele=C/G;version=Hapmap2;RS=rs806326781;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	160849629	160849728	.	+	.	Name=Tassel_length;B73v2_pos=4:155540900;1allele=C/T;version=Hapmap2;RS=rs1061213923;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	160849750	160849849	.	+	.	Name=Tassel_length;B73v2_pos=4:155541021;1allele=A/T;version=Hapmap2;RS=rs838953134;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	160871369	160871468	.	+	.	Name=Tassel_length;B73v2_pos=4:155565110;1allele=A/G;version=Hapmap2;RS=rs833156491;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	160914739	160914838	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:155608683;1allele=A/C;version=Hapmap1;RS=rs132148238;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	161017726	161017825	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:155704701;1allele=T/C;version=Hapmap2;RS=rs809552170;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	161045930	161046029	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:155732601;1allele=C/T;version=Hapmap2;RS=rs802070473;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	161047828	161047927	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:155734499;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	161079873	161079972	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:155768450;1allele=G/A;version=Hapmap2;RS=rs820365913;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	161081035	161081134	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:155769612;1allele=A/G;version=Hapmap2;RS=rs804931226;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	161171310	161171409	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:155860213;1allele=A/G;version=Hapmap2;RS=rs817719425;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	161222104	161222203	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:155910635;1allele=G/T;version=Hapmap2;RS=rs828112220;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	161252143	161252242	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:155941405;1allele=G/A;version=Hapmap2;RS=rs805578684;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	161337533	161337632	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:156024578;1allele=A/T;version=Hapmap2;RS=rs132148708;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	161382874	161382973	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:156069736;1allele=T/C;version=Hapmap2;RS=rs132148733;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	161383033	161383132	.	+	.	Name=Cob_diameter;B73v2_pos=4:156069895;1allele=C/G;version=Hapmap1;RS=rs132148736;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	161383882	161383981	.	+	.	Name=Nitrate;B73v2_pos=4:156070744;1allele=A/T;version=Hapmap2;RS=rs836818314;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	161398841	161398940	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:156085703;1allele=G/A;version=Hapmap2;RS=rs824593042;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	161398849	161398948	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:156085711;1allele=G/A;version=Hapmap2;RS=rs826780796;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	161509872	161509971	.	+	.	Name=Tassel_length;B73v2_pos=4:156193715;1allele=G/A;version=Hapmap2;RS=rs837570749;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	161591333	161591432	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:156276421;1allele=C/A;version=Hapmap2;RS=rs129826486;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	161591405	161591504	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:156276493;1allele=A/G;version=Hapmap2;RS=rs129826490;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	161657041	161657140	.	+	.	Name=Leaf_width;B73v2_pos=4:156337637;1allele=C/T;version=Hapmap2;RS=rs807031496;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	161663261	161663360	.	+	.	Name=Tassel_length;B73v2_pos=4:156344034;1allele=A/T;version=Hapmap2;RS=rs129826621;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	161699921	161700020	.	+	.	Name=Nitrate;B73v2_pos=4:156379094;1allele=C/T;version=Hapmap2;RS=rs847521611;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	161703905	161704004	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:156383078;1allele=T/G;version=Hapmap2;RS=rs129826750;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	161710497	161710596	.	+	.	Name=Tassel_length;B73v2_pos=4:156389671;1allele=G/A;version=Hapmap2;RS=rs132149077;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	161711872	161711971	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:156391046;1allele=/TAAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	161711877	161711976	.	+	.	Name=Tassel_length;B73v2_pos=4:156391051;1allele=A/T;version=Hapmap2;RS=rs132149094;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	161719199	161719298	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:156398577;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	161739836	161739935	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:156419215;1allele=C/A;version=Hapmap2;RS=rs843014164;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	161767917	161768016	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:156447222;1allele=T/C;version=Hapmap2;RS=rs836543860;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	161789211	161789310	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:156468867;1allele=G/A;version=Hapmap2;RS=rs805626582;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	161829855	161829954	.	+	.	Name=Leaf_width;B73v2_pos=4:156514977;1allele=G/T;version=Hapmap2;RS=rs842620428;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	161830458	161830557	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:156515580;1allele=C/A;version=Hapmap2;RS=rs129827080;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	161830843	161830942	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:156515965;1allele=C/G;version=Hapmap2;RS=rs129827086;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	161836742	161836841	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:156521864;1allele=T/A;version=Hapmap2;RS=rs813095859;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	161836750	161836849	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:156521872;1allele=G/A;version=Hapmap2;RS=rs842848575;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	161839593	161839692	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:156524716;1allele=C/T;version=Hapmap2;RS=rs828301694;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	161965419	161965518	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:156651205;1allele=G/A;version=Hapmap2;RS=rs833534576;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162035418	162035517	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:156713106;1allele=G/T;version=Hapmap2;RS=rs816263950;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	162035734	162035833	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:156713422;1allele=C/G;version=Hapmap2;RS=rs850103942;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	162037357	162037456	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:156715045;1allele=G/A;version=Hapmap2;RS=rs830008849;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162037371	162037470	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:156715059;1allele=C/T;version=Hapmap2;RS=rs813000262;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162041074	162041173	.	+	.	Name=Total_amino_acids;B73v2_pos=4:156718762;1allele=G/C;version=Hapmap2;RS=rs132149524;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	162140937	162141036	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:156838384;1allele=C/T;version=Hapmap2;RS=rs1060618463;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162168579	162168678	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:156871601;1allele=C/A;version=Hapmap2;RS=rs277536142;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	162170526	162170625	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:156873548;1allele=G/A;version=Hapmap2;RS=rs842045136;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162193824	162193923	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:156896846;1allele=A/G;version=Hapmap2;RS=rs829231430;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	162222981	162223080	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:156923467;1allele=C/A;version=Hapmap1;RS=rs132149650;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162223022	162223121	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:156923508;1allele=C/T;version=Hapmap1;RS=rs132149653;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162223098	162223197	.	+	.	Name=Leaf_width;B73v2_pos=4:156923584;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	162223149	162223248	.	+	.	Name=Leaf_width;B73v2_pos=4:156923635;1allele=C/A;version=Hapmap2;RS=rs826283264;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	162231096	162231195	.	+	.	Name=Nitrate;B73v2_pos=4:156931582;1allele=A/G;version=Hapmap2;RS=rs833720485;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	162234244	162234343	.	+	.	Name=Nitrate;B73v2_pos=4:156934730;1allele=T/C;version=Hapmap2;RS=rs808767068;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	162255411	162255510	.	+	.	Name=Nitrate;B73v2_pos=4:156955897;1allele=G/A;version=Hapmap2;RS=rs803694588;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162271398	162271497	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:156971884;1allele=T/G;version=Hapmap2;RS=rs726011028;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	162271399	162271498	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:156971885;1allele=T/G;version=Hapmap2;RS=rs727143393;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	162293359	162293458	.	+	.	Name=Nitrate;B73v2_pos=4:156993845;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	162342174	162342273	.	+	.	Name=Tassel_length;B73v2_pos=4:157090184;1allele=G/C;version=Hapmap2;RS=rs725678568;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	162342635	162342734	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:157090645;1allele=T/G;version=Hapmap1;RS=rs132149891;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	162342760	162342859	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:157090770;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	162342881	162342980	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:157090891;1allele=C/T;version=Hapmap2;RS=rs807290352;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162345720	162345819	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:157093730;1allele=A/G;version=Hapmap2;RS=rs803783369;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	162346283	162346382	.	+	.	Name=Nitrate;B73v2_pos=4:157094293;1allele=G/A;version=Hapmap2;RS=rs724728316;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162350190	162350289	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:157098200;1allele=T/A;version=Hapmap2;RS=rs837248610;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	162350201	162350300	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:157098211;1allele=G/T;version=Hapmap2;RS=rs842465207;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	162363744	162363843	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:157111803;1allele=A/G;version=Hapmap2;RS=rs277536703;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162664540	162664639	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:157411450;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	162742265	162742364	.	+	.	Name=Nitrate;B73v2_pos=4:157489075;1allele=G/A;version=Hapmap2;RS=rs821599478;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162759019	162759118	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:157505810;1allele=G/T;version=Hapmap2;RS=rs819239803;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	162759662	162759761	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:157506453;1allele=C/A;version=Hapmap2;RS=rs834924235;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	162762122	162762221	.	+	.	Name=Nitrate;B73v2_pos=4:157508913;1allele=C/T;version=Hapmap2;RS=rs129828453;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162766804	162766903	.	+	.	Name=Nitrate;B73v2_pos=4:157513596;1allele=G/A;version=Hapmap2;RS=rs805328625;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162766832	162766931	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:157513624;1allele=A/G;version=Hapmap2;RS=rs848988518;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	162770291	162770390	.	+	.	Name=Nitrate;B73v2_pos=4:157517083;1allele=G/A;version=Hapmap2;RS=rs850060310;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162803450	162803549	.	+	.	Name=Nitrate;B73v2_pos=4:157550238;1allele=G/A;version=Hapmap2;RS=rs132150481;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162809921	162810020	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:157556711;1allele=G/A;version=Hapmap2;RS=rs277537064;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162822040	162822139	.	+	.	Name=Nitrate;B73v2_pos=4:157568830;1allele=A/T;version=Hapmap2;RS=rs833425349;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	162825208	162825307	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:157571998;1allele=G/A;version=Hapmap2;RS=rs277537130;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162830257	162830356	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:157577047;1allele=C/T;version=Hapmap2;RS=rs842807243;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162845247	162845346	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:157592039;1allele=T/C;version=Hapmap2;RS=rs825060704;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	162854894	162854993	.	+	.	Name=Nitrate;B73v2_pos=4:157601686;1allele=C/T;version=Hapmap2;RS=rs842611745;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162858449	162858548	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:157605241;1allele=T/G;version=Hapmap2;RS=rs805167566;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	162866499	162866598	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:157613291;1allele=G/A;version=Hapmap2;RS=rs846182264;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	162904510	162904609	.	+	.	Name=Nitrate;B73v2_pos=4:157651301;1allele=G/C;version=Hapmap2;RS=rs830134223;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	162908195	162908294	.	+	.	Name=Nitrate;B73v2_pos=4:157685480;1allele=C/T;version=Hapmap2;RS=rs815231643;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162909015	162909114	.	+	.	Name=Nitrate;B73v2_pos=4:157686300;1allele=C/T;version=Hapmap2;RS=rs845579156;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	162919605	162919704	.	+	.	Name=Nitrate;B73v2_pos=4:157696893;1allele=C/T;version=Hapmap2;RS=rs838922902;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	163044138	163044237	.	+	.	Name=Nitrate;B73v2_pos=4:157823606;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	163044297	163044396	.	+	.	Name=Nitrate;B73v2_pos=4:157823765;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	163060177	163060276	.	+	.	Name=Nitrate;B73v2_pos=4:157857843;1allele=G/A;version=Hapmap2;RS=rs844713455;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	163067334	163067433	.	+	.	Name=Nitrate;B73v2_pos=4:157865001;1allele=C/T;version=Hapmap2;RS=rs808479190;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	163082765	163082864	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:157880433;1allele=G/A;version=Hapmap2;RS=rs819568472;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	163092932	163093031	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:157890594;1allele=A/T;version=Hapmap2;RS=rs129828779;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	163120821	163120920	.	+	.	Name=Nitrate;B73v2_pos=4:157918533;1allele=T/A;version=Hapmap2;RS=rs132150671;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	163121825	163121924	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:157919537;1allele=A/G;version=Hapmap2;RS=rs803890809;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	163125893	163125992	.	+	.	Name=Nitrate;B73v2_pos=4:157923605;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	163126033	163126132	.	+	.	Name=Nitrate;B73v2_pos=4:157923745;1allele=T/C;version=Hapmap2;RS=rs831367615;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	163141371	163141470	.	+	.	Name=Nitrate;B73v2_pos=4:157841706;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	163159752	163159851	.	+	.	Name=Nitrate;B73v2_pos=4:157934354;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	163194599	163194698	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:157968577;1allele=C/G;version=Hapmap2;RS=rs132150764;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	163194599	163194698	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:157968577;1allele=C/G;version=Hapmap2;RS=rs132150764;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	163195681	163195780	.	+	.	Name=Nitrate;B73v2_pos=4:157969659;1allele=/AT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	163196423	163196522	.	+	.	Name=Nitrate;B73v2_pos=4:157970401;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	163222730	163222829	.	+	.	Name=Nitrate;B73v2_pos=4:157997865;1allele=T/C;version=Hapmap2;RS=rs828210785;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	163283248	163283347	.	+	.	Name=Nitrate;B73v2_pos=4:158029128;1allele=T/A;version=Hapmap2;RS=rs825121696;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	163285776	163285875	.	+	.	Name=Nitrate;B73v2_pos=4:158031656;1allele=G/A;version=Hapmap2;RS=rs848203743;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	163285887	163285986	.	+	.	Name=Height_above_ear;B73v2_pos=4:158031767;1allele=C/A;version=Hapmap1;RS=rs132150838;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	163285887	163285986	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:158031767;1allele=C/A;version=Hapmap1;RS=rs132150838;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	163294285	163294384	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158068522;1allele=C/A;version=Hapmap2;RS=rs810381380;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	163299432	163299531	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158073666;1allele=A/G;version=Hapmap2;RS=rs814498648;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	163327834	163327933	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158102320;1allele=A/C;version=Hapmap2;RS=rs804417695;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	163369218	163369317	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:158143748;1allele=G/C;version=Hapmap1;RS=rs132151104;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	163373129	163373228	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:158147659;1allele=T/C;version=Hapmap2;RS=rs811954303;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	163376243	163376342	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158150773;1allele=G/A;version=Hapmap2;RS=rs817752356;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	163425358	163425457	.	+	.	Name=Starch;B73v2_pos=4:158198278;1allele=A/T;version=Hapmap2;RS=rs132151189;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	163438610	163438708	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158211545;1allele=G/A;version=Hapmap2;RS=rs829687738;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	163448872	163448969	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158229390;1allele=+/-;version=Hapmap2;RS=rs1064286379;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	163533968	163534067	.	+	.	Name=Plant_height;B73v2_pos=4:158338274;1allele=T/A;version=Hapmap2;RS=rs132151208;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	163537322	163537421	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:158341628;1allele=A/G;version=Hapmap2;RS=rs823906119;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	163564529	163564628	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158366762;1allele=G/A;version=Hapmap2;RS=rs840814238;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	163633794	163633893	.	+	.	Name=Starch;B73v2_pos=4:158404454;1allele=A/G;version=Hapmap2;RS=rs834596515;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	163683555	163683654	.	+	.	Name=Days_to_silk;B73v2_pos=4:158454357;1allele=C/T;version=Hapmap1;RS=rs132151289;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	163786540	163786639	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:158556056;1allele=G/A;version=Hapmap2;RS=rs129829631;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	163938099	163938198	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:158711210;1allele=A/G;version=Hapmap2;RS=rs845166643;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	164010347	164010446	.	+	.	Name=Starch;B73v2_pos=4:158782325;1allele=C/T;version=Hapmap2;RS=rs823013829;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	164241488	164241587	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:159017989;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	164653581	164653680	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:159424080;1allele=A/G;version=Hapmap2;RS=rs811342850;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	164692189	164692288	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:159561684;1allele=G/A;version=Hapmap2;RS=rs845479565;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	164770727	164770826	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:159640077;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	165133766	165133865	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:159993804;1allele=A/G;version=Hapmap2;RS=rs830866859;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	165136439	165136538	.	+	.	Name=Nitrate;B73v2_pos=4:159996477;1allele=T/G;version=Hapmap2;RS=rs129831160;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	165174590	165174689	.	+	.	Name=Days_to_silk;B73v2_pos=4:160013550;1allele=G/T;version=Hapmap2;RS=rs129831179;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	165175790	165175889	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:160014750;1allele=A/G;version=Hapmap2;RS=rs129831187;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	165182918	165183017	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:160021807;1allele=A/T;version=Hapmap2;RS=rs812504865;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	165267196	165267295	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:160106689;1allele=G/T;version=Hapmap2;RS=rs277540599;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	165323414	165323513	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:160163508;1allele=C/G;version=Hapmap2;RS=rs831142087;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	165323414	165323513	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:160163508;1allele=C/G;version=Hapmap2;RS=rs831142087;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	165353585	165353684	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:160184897;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	165409921	165410020	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:160249022;1allele=G/T;version=Hapmap2;RS=rs817359320;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	165446090	165446189	.	+	.	Name=Leaf_width;B73v2_pos=4:160285568;1allele=A/T;version=Hapmap2;RS=rs803478715;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	165503833	165503932	.	+	.	Name=Ear_height;B73v2_pos=4:160338472;1allele=A/G;version=Hapmap2;RS=rs809910679;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	165503833	165503932	.	+	.	Name=Plant_height;B73v2_pos=4:160338472;1allele=A/G;version=Hapmap2;RS=rs809910679;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	165503837	165503936	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:160338476;1allele=C/G;version=Hapmap2;RS=rs829311696;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	165503837	165503936	.	+	.	Name=Plant_height;B73v2_pos=4:160338476;1allele=C/G;version=Hapmap2;RS=rs829311696;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	165503847	165503946	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:160338486;1allele=T/C;version=Hapmap2;RS=rs849267994;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	165503847	165503946	.	+	.	Name=Plant_height;B73v2_pos=4:160338486;1allele=T/C;version=Hapmap2;RS=rs849267994;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	165503948	165504047	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:160338587;1allele=T/C;version=Hapmap2;RS=rs841363864;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	165504182	165504281	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:160338821;1allele=G/A;version=Hapmap2;RS=rs129831520;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	165515602	165515701	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:160350155;1allele=A/G;version=Hapmap2;RS=rs804708937;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	165622642	165622741	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:160457934;1allele=C/T;version=Hapmap2;RS=rs826716927;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	165628760	165628859	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:160464053;1allele=G/A;version=Hapmap2;RS=rs835058322;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	165663023	165663122	.	+	.	Name=Starch;B73v2_pos=4:160498318;1allele=C/T;version=Hapmap2;RS=rs724431578;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	165669431	165669530	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:160504726;1allele=C/T;version=Hapmap2;RS=rs1063346808;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	166134195	166134294	.	+	.	Name=Starch;B73v2_pos=4:160971403;1allele=G/A;version=Hapmap2;RS=rs806644987;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	166173985	166174084	.	+	.	Name=Starch;B73v2_pos=4:161010586;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	166178148	166178247	.	+	.	Name=Starch;B73v2_pos=4:161014749;1allele=C/T;version=Hapmap2;RS=rs845061177;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	166187541	166187640	.	+	.	Name=Starch;B73v2_pos=4:161024142;1allele=G/T;version=Hapmap2;RS=rs842658810;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	166211126	166211225	.	+	.	Name=Starch;B73v2_pos=4:161047717;1allele=/CCCTAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	166212205	166212304	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:161048796;1allele=T/C;version=Hapmap2;RS=rs846419360;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	166233345	166233444	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:161068718;1allele=C/T;version=Hapmap2;RS=rs810028626;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	166280474	166280573	.	+	.	Name=Leaf_length;B73v2_pos=4:161114774;1allele=C/A;version=Hapmap2;RS=rs806762887;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	166291592	166291691	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:161125892;1allele=G/A;version=Hapmap2;RS=rs129832177;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	166300958	166301057	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:161135260;1allele=C/T;version=Hapmap2;RS=rs820747417;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	166448919	166449018	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:161280244;1allele=A/C;version=Hapmap2;RS=rs822291344;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	166661046	166661145	.	+	.	Name=Starch;B73v2_pos=4:161492453;1allele=C/T;version=Hapmap2;RS=rs803719221;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	166670003	166670102	.	+	.	Name=Plant_height;B73v2_pos=4:161501410;1allele=A/T;version=Hapmap2;RS=rs845794617;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	166719628	166719727	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:161547663;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	166724203	166724302	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:161552238;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	166724203	166724302	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:161552238;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	166821646	166821745	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:161649687;1allele=T/C;version=Hapmap2;RS=rs847340310;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	167050258	167050357	.	+	.	Name=Ear_height;B73v2_pos=4:161908213;1allele=G/C;version=Hapmap2;RS=rs819898236;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	167058397	167058496	.	+	.	Name=Nitrate;B73v2_pos=4:161916352;1allele=A/G;version=Hapmap2;RS=rs802026993;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	167501200	167501299	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:162357689;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	167620764	167620863	.	+	.	Name=Days_to_silk;B73v2_pos=4:162481065;1allele=C/G;version=Hapmap1;RS=rs1062887756;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	167704819	167704918	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:162565448;1allele=T/G;version=Hapmap2;RS=rs132154171;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	167704819	167704918	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:162565448;1allele=T/G;version=Hapmap2;RS=rs132154171;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	167869891	167869990	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=2:36554471;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168033200	168033299	.	+	.	Name=Plant_height;B73v2_pos=4:162905795;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168234328	168234427	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:163150787;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168234328	168234427	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:163150787;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168235355	168235454	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:163151814;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168237417	168237516	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:163153876;1allele=C/T;version=Hapmap2;RS=rs832120811;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	168277268	168277367	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:163192686;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168305822	168305921	.	+	.	Name=Nitrate;B73v2_pos=4:163229502;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168360826	168360925	.	+	.	Name=Leaf_width;B73v2_pos=4:163277288;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168460348	168460447	.	+	.	Name=Days_to_silk;B73v2_pos=4:163389587;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168759639	168759738	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:163683260;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168759639	168759738	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:163683260;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168767059	168767158	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:163690680;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168767059	168767158	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:163690680;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168855705	168855804	.	+	.	Name=Nitrate;B73v2_pos=4:163779228;1allele=T/G;version=Hapmap2;RS=rs132154992;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	168857426	168857525	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:163780949;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	168972250	168972349	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:163893253;1allele=C/T;version=Hapmap2;RS=rs132155131;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	168972844	168972943	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:163893847;1allele=G/A;version=Hapmap2;RS=rs830196696;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	168972844	168972943	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:163893847;1allele=G/A;version=Hapmap2;RS=rs830196696;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	168976672	168976771	.	+	.	Name=Ear_height;B73v2_pos=4:163897675;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	169045591	169045690	.	+	.	Name=Nitrate;B73v2_pos=4:163963465;1allele=T/C;version=Hapmap1;RS=rs129835255;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	169078522	169078621	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:163996433;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	169175518	169175617	.	+	.	Name=Ear_height;B73v2_pos=4:164089964;1allele=G/A;version=Hapmap1;RS=rs132155273;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	169175984	169176083	.	+	.	Name=Ear_height;B73v2_pos=4:164090430;1allele=C/G;version=Hapmap1;RS=rs132155281;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	169176219	169176318	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:164090665;1allele=C/T;version=Hapmap2;RS=rs727375453;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	169353595	169353694	.	+	.	Name=Total_amino_acids;B73v2_pos=4:164249350;1allele=G/A;version=Hapmap2;RS=rs820960916;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	169353813	169353912	.	+	.	Name=Total_amino_acids;B73v2_pos=4:164249568;1allele=C/T;version=Hapmap2;RS=rs813406395;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	169369541	169369640	.	+	.	Name=Leaf_length;B73v2_pos=4:164265296;1allele=G/A;version=Hapmap2;RS=rs277543613;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	169774049	169774148	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:164657541;1allele=G/A;version=Hapmap2;RS=rs834302522;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	169870473	169870572	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:164741728;1allele=A/G;version=Hapmap2;RS=rs849899945;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	169870473	169870572	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:164741728;1allele=A/G;version=Hapmap2;RS=rs849899945;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	169999486	169999585	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:164868979;1allele=C/T;version=Hapmap2;RS=rs825819019;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	171056033	171056132	.	+	.	Name=Days_to_silk;B73v2_pos=4:165970293;1allele=G/C;version=Hapmap2;RS=rs129836613;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	171057768	171057867	.	+	.	Name=Days_to_silk;B73v2_pos=4:165972028;1allele=G/T;version=Hapmap1;RS=rs132156230;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	171074007	171074106	.	+	.	Name=Nitrate;B73v2_pos=4:165988255;1allele=G/A;version=Hapmap2;RS=rs812218031;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	171472837	171472936	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:166380481;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	172015939	172016038	.	+	.	Name=Leaf_width;B73v2_pos=4:166927316;1allele=G/T;version=Hapmap2;RS=rs132157111;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	172111846	172111945	.	+	.	Name=Days_to_silk;B73v2_pos=4:167023229;1allele=T/G;version=Hapmap2;RS=rs809623180;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	172111846	172111945	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:167023229;1allele=T/G;version=Hapmap2;RS=rs809623180;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	172111890	172111989	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:167023273;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	172176528	172176627	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:167085221;1allele=C/G;version=Hapmap2;RS=rs277544932;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	172176528	172176627	.	+	.	Name=Days_to_silk;B73v2_pos=4:167085221;1allele=C/G;version=Hapmap2;RS=rs277544932;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	172178769	172178868	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:167087462;1allele=G/T;version=Hapmap2;RS=rs813894265;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	172183299	172183398	.	+	.	Name=Days_to_silk;B73v2_pos=4:167091992;1allele=C/T;version=Hapmap2;RS=rs842370463;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	172273881	172273980	.	+	.	Name=Total_amino_acids;B73v2_pos=4:167185273;1allele=G/A;version=Hapmap1;RS=rs132157808;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	172288492	172288591	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:167199884;1allele=C/T;version=Hapmap2;RS=rs832198929;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	172305676	172305775	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:167217068;1allele=A/G;version=Hapmap2;RS=rs819481220;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	172349917	172350016	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167312647;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	172364012	172364111	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:167298551;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	172384474	172384573	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167278089;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	172442234	172442333	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167364568;1allele=T/A;version=Hapmap2;RS=rs846654121;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	172445341	172445440	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167367674;1allele=A/G;version=Hapmap2;RS=rs1062195363;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	172445474	172445573	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167367807;1allele=A/G;version=Hapmap2;RS=rs129838615;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	172449818	172449917	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167372151;1allele=T/G;version=Hapmap2;RS=rs1061231909;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	172452679	172452778	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167375012;1allele=T/C;version=Hapmap2;RS=rs828236691;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	172455813	172455912	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167378146;1allele=T/A;version=Hapmap2;RS=rs277545199;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	172456258	172456357	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167378591;1allele=G/A;version=Hapmap2;RS=rs830315201;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	172481543	172481642	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:167403876;1allele=T/C;version=Hapmap2;RS=rs132158229;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	172604233	172604332	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:167516404;1allele=T/C;version=Hapmap1;RS=rs132158271;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	172683315	172683414	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:167610948;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	172755914	172756013	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:167697168;1allele=T/C;version=Hapmap2;RS=rs822609724;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	173255040	173255139	.	+	.	Name=Stalk_strength;B73v2_pos=4:168182863;1allele=C/T;version=Hapmap2;RS=rs816410519;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	173644680	173644779	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:168572104;1allele=G/T;version=Hapmap1;RS=rs129839315;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	173661159	173661258	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:168591407;1allele=C/T;version=Hapmap2;RS=rs129839360;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	173662177	173662276	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:168592706;1allele=T/C;version=Hapmap2;RS=rs129839376;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	173751790	173751889	.	+	.	Name=Stalk_strength;B73v2_pos=4:168677921;1allele=C/A;version=Hapmap2;RS=rs821541655;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	173995333	173995432	.	+	.	Name=Plant_height;B73v2_pos=4:168913486;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	173998320	173998419	.	+	.	Name=Days_to_silk;B73v2_pos=4:168910498;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	174234066	174234165	.	+	.	Name=Total_amino_acids;B73v2_pos=4:169158620;1allele=C/T;version=Hapmap2;RS=rs129840319;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	174350097	174350196	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:169242284;1allele=G/T;version=Hapmap2;RS=rs277546683;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	174520601	174520700	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:169410646;1allele=G/A;version=Hapmap2;RS=rs1062035379;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	174667022	174667121	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:169557158;1allele=T/C;version=Hapmap2;RS=rs277547265;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	174668339	174668438	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:169558475;1allele=G/T;version=Hapmap2;RS=rs845793848;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	174725255	174725354	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:169612336;1allele=G/A;version=Hapmap2;RS=rs277547333;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	174725608	174725707	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:169612689;1allele=T/C;version=Hapmap2;RS=rs129841357;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	174732418	174732517	.	+	.	Name=Total_amino_acids;B73v2_pos=4:169619375;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	174973618	174973717	.	+	.	Name=Nitrate;B73v2_pos=4:169855080;1allele=C/T;version=Hapmap2;RS=rs822664259;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	175031866	175031965	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:169906680;1allele=G/C;version=Hapmap2;RS=rs842962060;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	175072795	175072894	.	+	.	Name=Plant_height;B73v2_pos=4:169949274;1allele=C/A;version=Hapmap1;RS=rs132159133;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	175190373	175190472	.	+	.	Name=Total_amino_acids;B73v2_pos=4:170068366;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175234379	175234478	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:170090670;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175301775	175301874	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:170179256;1allele=G/A;version=Hapmap2;RS=rs1064258403;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	175305313	175305412	.	+	.	Name=Total_amino_acids;B73v2_pos=4:170182794;1allele=G/T;version=Hapmap2;RS=rs725161191;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	175350453	175350552	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:170216345;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175476903	175477002	.	+	.	Name=Total_amino_acids;B73v2_pos=4:170350694;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175523514	175523613	.	+	.	Name=Total_amino_acids;B73v2_pos=4:170399440;1allele=A/G;version=Hapmap2;RS=rs834092536;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	175533351	175533450	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:170409277;1allele=A/C;version=Hapmap2;RS=rs131185630;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	175643071	175643170	.	+	.	Name=Ear_height;B73v2_pos=4:170517297;1allele=C/A;version=Hapmap2;RS=rs277547921;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	175645557	175645656	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:170519783;1allele=C/T;version=Hapmap2;RS=rs129842089;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	175672441	175672540	.	+	.	Name=Nitrate;B73v2_pos=4:170540230;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175709004	175709103	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:170575507;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175730855	175730954	.	+	.	Name=Nitrate;B73v2_pos=4:170587474;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175758542	175758641	.	+	.	Name=Nitrate;B73v2_pos=4:170619526;1allele=G/A;version=Hapmap2;RS=rs840714967;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	175871612	175871711	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:170727595;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175888970	175889069	.	+	.	Name=Days_to_silk;B73v2_pos=4:170710237;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175891487	175891586	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:170707720;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	175925989	175926088	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:170782469;1allele=G/A;version=Hapmap2;RS=rs277548153;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	175945141	175945240	.	+	.	Name=Sucrose;B73v2_pos=4:170801416;1allele=C/T;version=Hapmap2;RS=rs129842416;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	175951235	175951334	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:170807510;1allele=C/G;version=Hapmap2;RS=rs821648467;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	175951235	175951334	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:170807510;1allele=C/G;version=Hapmap2;RS=rs821648467;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	175959297	175959396	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:170815572;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	176026724	176026823	.	+	.	Name=Nitrate;B73v2_pos=4:170883013;1allele=C/T;version=Hapmap2;RS=rs813911576;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	176029355	176029454	.	+	.	Name=Nitrate;B73v2_pos=4:170885644;1allele=G/T;version=Hapmap2;RS=rs836865711;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	176068155	176068254	.	+	.	Name=Nitrate;B73v2_pos=4:170923234;1allele=T/G;version=Hapmap2;RS=rs810101323;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	176108359	176108458	.	+	.	Name=Malate;B73v2_pos=4:170963440;1allele=G/A;version=Hapmap2;RS=rs837133314;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	176114901	176115000	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:170969982;1allele=G/C;version=Hapmap1;RS=rs132159838;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	176192575	176192674	.	+	.	Name=Stalk_strength;B73v2_pos=4:171047660;1allele=G/A;version=Hapmap2;RS=rs848988724;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	176196704	176196803	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:171051789;1allele=/TCCCAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	176198471	176198570	.	+	.	Name=Plant_height;B73v2_pos=4:171053556;1allele=G/A;version=Hapmap2;RS=rs129842672;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	176200847	176200946	.	+	.	Name=Nitrate;B73v2_pos=4:171055932;1allele=C/G;version=Hapmap2;RS=rs832761151;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	176221276	176221375	.	+	.	Name=Nitrate;B73v2_pos=4:171076361;1allele=C/T;version=Hapmap2;RS=rs837608095;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	176245274	176245373	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:171097697;1allele=C/T;version=Hapmap2;RS=rs803256938;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	176518725	176518824	.	+	.	Name=Nitrate;B73v2_pos=4:171367165;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	176585832	176585931	.	+	.	Name=Nitrate;B73v2_pos=4:171434731;1allele=G/T;version=Hapmap2;RS=rs849533748;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	176704627	176704726	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:171550434;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	176708595	176708694	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:171554402;1allele=C/T;version=Hapmap2;RS=rs129843124;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	176716261	176716360	.	+	.	Name=Malate;B73v2_pos=4:171562068;1allele=G/T;version=Hapmap2;RS=rs132160336;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	176716272	176716371	.	+	.	Name=Malate;B73v2_pos=4:171562079;1allele=A/G;version=Hapmap2;RS=rs132160337;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	176724699	176724798	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:171570444;1allele=T/C;version=Hapmap2;RS=rs820612756;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	176767425	176767524	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:171612917;1allele=G/A;version=Hapmap2;RS=rs811755613;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	176784624	176784723	.	+	.	Name=Fructose;B73v2_pos=4:171631002;1allele=C/A;version=Hapmap1;RS=rs132160454;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	176820402	176820501	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:171665599;1allele=G/C;version=Hapmap1;RS=rs132160473;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	176887532	176887631	.	+	.	Name=Sucrose;B73v2_pos=4:171732729;1allele=/AC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	176888865	176888964	.	+	.	Name=Malate;B73v2_pos=4:171734062;1allele=G/A;version=Hapmap1;RS=rs129843486;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	176930224	176930323	.	+	.	Name=Malate;B73v2_pos=4:171774016;1allele=A/C;version=Hapmap2;RS=rs836227630;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	176930804	176930903	.	+	.	Name=Total_amino_acids;B73v2_pos=4:171774596;1allele=A/G;version=Hapmap2;RS=rs129843559;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	176931025	176931124	.	+	.	Name=Total_amino_acids;B73v2_pos=4:171774817;1allele=G/A;version=Hapmap2;RS=rs129843564;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	176933462	176933561	.	+	.	Name=Total_amino_acids;B73v2_pos=4:171777254;1allele=G/A;version=Hapmap2;RS=rs810480389;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	176935155	176935254	.	+	.	Name=Sucrose;B73v2_pos=4:171778947;1allele=A/C;version=Hapmap2;RS=rs132160694;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	176935384	176935483	.	+	.	Name=Sucrose;B73v2_pos=4:171779176;1allele=A/T;version=Hapmap2;RS=rs814907723;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	176938500	176938599	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:171782292;1allele=C/T;version=Hapmap2;RS=rs277549112;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	176939875	176939974	.	+	.	Name=Fumarate;B73v2_pos=4:171783667;1allele=G/C;version=Hapmap1;RS=rs132160771;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	176942112	176942211	.	+	.	Name=Malate;B73v2_pos=4:171785904;1allele=G/A;version=Hapmap2;RS=rs805203649;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	176942144	176942243	.	+	.	Name=Malate;B73v2_pos=4:171785936;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	176944558	176944657	.	+	.	Name=Malate;B73v2_pos=4:171788352;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	177064848	177064947	.	+	.	Name=Total_amino_acids;B73v2_pos=4:171909241;1allele=C/G;version=Hapmap1;RS=rs132160991;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	177070334	177070433	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:171914727;1allele=A/G;version=Hapmap1;RS=rs842894849;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177071520	177071619	.	+	.	Name=Leaf_width;B73v2_pos=4:171915913;1allele=A/G;version=Hapmap2;RS=rs807758344;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177172256	177172355	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:172017037;1allele=A/G;version=Hapmap2;RS=rs814499653;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177198946	177199045	.	+	.	Name=Malate;B73v2_pos=4:172044232;1allele=A/G;version=Hapmap2;RS=rs830274267;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177206146	177206245	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:172051430;1allele=T/G;version=Hapmap2;RS=rs828598650;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	177211579	177211678	.	+	.	Name=Fructose;B73v2_pos=4:172056863;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	177238299	177238398	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:172085508;1allele=C/T;version=Hapmap2;RS=rs724536592;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	177240188	177240287	.	+	.	Name=Total_amino_acids;B73v2_pos=4:172087397;1allele=G/A;version=Hapmap2;RS=rs129844052;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	177259053	177259152	.	+	.	Name=Total_amino_acids;B73v2_pos=4:172108377;1allele=G/A;version=Hapmap2;RS=rs129844077;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177296894	177296993	.	+	.	Name=Total_amino_acids;B73v2_pos=4:172146324;1allele=C/A;version=Hapmap2;RS=rs818156576;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	177312547	177312646	.	+	.	Name=Malate;B73v2_pos=4:172161579;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	177329688	177329787	.	+	.	Name=Fructose;B73v2_pos=4:172178726;1allele=A/G;version=Hapmap2;RS=rs850236237;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	177330053	177330152	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:172179091;1allele=G/C;version=Hapmap2;RS=rs816295256;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	177620925	177621024	.	+	.	Name=Days_to_silk;B73v2_pos=4:172474918;1allele=C/T;version=Hapmap2;RS=rs820254270;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	177620925	177621024	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:172474918;1allele=C/T;version=Hapmap2;RS=rs820254270;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	177659000	177659099	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:172514858;1allele=A/G;version=Hapmap2;RS=rs822625084;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177659000	177659099	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:172514858;1allele=A/G;version=Hapmap2;RS=rs822625084;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177659481	177659580	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:172515339;1allele=T/C;version=Hapmap2;RS=rs129844384;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	177792448	177792547	.	+	.	Name=Total_amino_acids;B73v2_pos=4:172679477;1allele=GA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	177793018	177793117	.	+	.	Name=Total_amino_acids;B73v2_pos=4:172680047;1allele=C/G;version=Hapmap1;RS=rs819401933;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	177901819	177901918	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:172761312;1allele=C/T;version=Hapmap2;RS=rs132161629;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	177916702	177916801	.	+	.	Name=Plant_height;B73v2_pos=4:172776176;1allele=A/G;version=Hapmap2;RS=rs850461426;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177916702	177916801	.	+	.	Name=Ear_height;B73v2_pos=4:172776176;1allele=A/G;version=Hapmap2;RS=rs850461426;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	177930074	177930173	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:172789548;1allele=T/C;version=Hapmap2;RS=rs132161838;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	177973556	177973655	.	+	.	Name=Days_to_silk;B73v2_pos=4:172833206;1allele=A/T;version=Hapmap2;RS=rs132161854;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	178047650	178047749	.	+	.	Name=Fructose;B73v2_pos=4:172973345;1allele=T/C;version=Hapmap2;RS=rs820169277;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178094384	178094483	.	+	.	Name=Fructose;B73v2_pos=4:173020086;1allele=G/A;version=Hapmap2;RS=rs801622529;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	178106463	178106562	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:173032165;1allele=A/G;version=Hapmap2;RS=rs1062912996;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	178206318	178206417	.	+	.	Name=Fructose;B73v2_pos=4:173136042;1allele=A/G;version=Hapmap2;RS=rs822029572;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	178262614	178262713	.	+	.	Name=Fructose;B73v2_pos=4:173209777;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	178264234	178264333	.	+	.	Name=Fructose;B73v2_pos=4:173208157;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	178264311	178264410	.	+	.	Name=Fructose;B73v2_pos=4:173208080;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	178287091	178287190	.	+	.	Name=Malate;B73v2_pos=4:173193496;1allele=G/A;version=Hapmap2;RS=rs812590721;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178299656	178299755	.	+	.	Name=Sucrose;B73v2_pos=4:173180926;1allele=A/G;version=Hapmap2;RS=rs843840278;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178299957	178300056	.	+	.	Name=Total_amino_acids;B73v2_pos=4:173180625;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	178302696	178302795	.	+	.	Name=Fructose;B73v2_pos=4:173177886;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	178356667	178356766	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:173284202;1allele=T/C;version=Hapmap2;RS=rs820069483;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	178370172	178370271	.	+	.	Name=Sucrose;B73v2_pos=4:173297707;1allele=T/C;version=Hapmap2;RS=rs129845312;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178372504	178372603	.	+	.	Name=Malate;B73v2_pos=4:173300039;1allele=T/A;version=Hapmap2;RS=rs277550793;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	178376128	178376227	.	+	.	Name=Ear_height;B73v2_pos=4:173303663;1allele=T/C;version=Hapmap2;RS=rs821577233;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178380862	178380961	.	+	.	Name=Fructose;B73v2_pos=4:173308397;1allele=C/G;version=Hapmap1;RS=rs132162221;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	178387342	178387441	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:173314878;1allele=T/C;version=Hapmap2;RS=rs129845408;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178478452	178478551	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:173406857;1allele=G/A;version=Hapmap2;RS=rs843735994;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	178629091	178629190	.	+	.	Name=Sucrose;B73v2_pos=4:173554965;1allele=C/G;version=Hapmap1;RS=rs132162356;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	178635690	178635789	.	+	.	Name=Cob_diameter;B73v2_pos=4:173561564;1allele=G/A;version=Hapmap2;RS=rs132162417;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	178636729	178636828	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:173562603;1allele=/TGCAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	178638032	178638131	.	+	.	Name=Cob_diameter;B73v2_pos=4:173563906;1allele=C/T;version=Hapmap2;RS=rs277551102;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178671442	178671541	.	+	.	Name=Height_above_ear;B73v2_pos=4:173597315;1allele=A/G;version=Hapmap2;RS=rs129845622;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	178671811	178671910	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:173597684;1allele=G/A;version=Hapmap2;RS=rs835104919;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	178674958	178675057	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:173600831;1allele=G/C;version=Hapmap2;RS=rs828779205;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	178676751	178676850	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:173602624;1allele=T/C;version=Hapmap2;RS=rs813134658;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	178676996	178677095	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:173602869;1allele=A/T;version=Hapmap2;RS=rs811448603;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	178679728	178679827	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:173605602;1allele=A/G;version=Hapmap2;RS=rs806146107;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	178689504	178689603	.	+	.	Name=Days_to_silk;B73v2_pos=4:173623398;1allele=C/T;version=Hapmap2;RS=rs845432552;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	178790443	178790542	.	+	.	Name=Height_above_ear;B73v2_pos=4:173721469;1allele=/ATCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	178791189	178791288	.	+	.	Name=Days_to_silk;B73v2_pos=4:173722215;1allele=C/G;version=Hapmap2;RS=rs838037386;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	178859265	178859364	.	+	.	Name=Cob_diameter;B73v2_pos=4:173779511;1allele=T/G;version=Hapmap2;RS=rs845273009;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	178872047	178872146	.	+	.	Name=Days_to_silk;B73v2_pos=4:173792296;1allele=G/A;version=Hapmap2;RS=rs844065841;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	178876907	178877006	.	+	.	Name=Cob_diameter;B73v2_pos=4:173797156;1allele=A/G;version=Hapmap2;RS=rs1062067813;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	178910606	178910705	.	+	.	Name=Nitrate;B73v2_pos=4:173830790;1allele=G/A;version=Hapmap2;RS=rs834154736;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	178910879	178910978	.	+	.	Name=Nitrate;B73v2_pos=4:173831063;1allele=C/T;version=Hapmap2;RS=rs841698101;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	179065482	179065581	.	+	.	Name=Cob_diameter;B73v2_pos=4:173985868;1allele=T/C;version=Hapmap2;RS=rs846922637;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	179070546	179070645	.	+	.	Name=Days_to_silk;B73v2_pos=4:173990932;1allele=T/C;version=Hapmap2;RS=rs810208336;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	179076624	179076723	.	+	.	Name=Cob_diameter;B73v2_pos=4:173997010;1allele=T/G;version=Hapmap2;RS=rs132162848;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	179077335	179077434	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:173997721;1allele=A/T;version=Hapmap2;RS=rs129846202;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	179078666	179078765	.	+	.	Name=Cob_diameter;B73v2_pos=4:173999052;1allele=G/T;version=Hapmap2;RS=rs129846231;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	179079379	179079478	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:173999765;1allele=G/A;version=Hapmap2;RS=rs801840722;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	179088789	179088888	.	+	.	Name=Cob_diameter;B73v2_pos=4:174009175;1allele=A/G;version=Hapmap2;RS=rs129846267;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	179089352	179089451	.	+	.	Name=Cob_diameter;B73v2_pos=4:174009738;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	179089366	179089465	.	+	.	Name=Cob_diameter;B73v2_pos=4:174009752;1allele=A/G;version=Hapmap2;RS=rs845224166;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	179089947	179090046	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:174010333;1allele=G/A;version=Hapmap2;RS=rs832477007;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	179117885	179117984	.	+	.	Name=Stalk_strength;B73v2_pos=4:174038272;1allele=G/T;version=Hapmap2;RS=rs277551525;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	179594077	179594176	.	+	.	Name=Days_to_silk;B73v2_pos=4:174534583;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	179637590	179637689	.	+	.	Name=Days_to_silk;B73v2_pos=4:174545485;1allele=G/A;version=Hapmap1;RS=rs132163209;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	179692410	179692509	.	+	.	Name=Height_above_ear;B73v2_pos=4:174613554;1allele=T/C;version=Hapmap2;RS=rs813199238;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	179779449	179779548	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:174685283;1allele=T/C;version=Hapmap2;RS=rs840787705;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	179782657	179782756	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:174688491;1allele=A/G;version=Hapmap2;RS=rs129846839;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	179789098	179789197	.	+	.	Name=Cob_diameter;B73v2_pos=4:174694932;1allele=A/C;version=Hapmap2;RS=rs805166117;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	179830283	179830382	.	+	.	Name=Cob_diameter;B73v2_pos=4:174735602;1allele=T/C;version=Hapmap1;RS=rs807396876;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	179864526	179864625	.	+	.	Name=Cob_diameter;B73v2_pos=4:174772703;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	179864917	179865016	.	+	.	Name=Cob_diameter;B73v2_pos=4:174773094;1allele=C/T;version=Hapmap2;RS=rs129847014;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	179876255	179876354	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:174784332;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	179934694	179934793	.	+	.	Name=Cob_diameter;B73v2_pos=4:174844803;1allele=TCG/;version=Hapmap1;RS=rs1061526708;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	179936217	179936316	.	+	.	Name=Cob_diameter;B73v2_pos=4:174846326;1allele=T/C;version=Hapmap1;RS=rs132163420;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	180000027	180000126	.	+	.	Name=Total_amino_acids;B73v2_pos=4:174910169;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180003426	180003525	.	+	.	Name=Total_amino_acids;B73v2_pos=4:174913568;1allele=A/G;version=Hapmap2;RS=rs132163561;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	180003757	180003856	.	+	.	Name=Tassel_length;B73v2_pos=4:174913899;1allele=C/A;version=Hapmap2;RS=rs132163566;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	180053076	180053175	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:174960587;1allele=/GACC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180077419	180077518	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:175080176;1allele=A/G;version=Hapmap2;RS=rs842616885;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	180195083	180195182	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:175119951;1allele=T/C;version=Hapmap2;RS=rs825626333;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	180276987	180277086	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:175201898;1allele=C/A;version=Hapmap2;RS=rs840605074;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	180287095	180287194	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:175212014;1allele=G/A;version=Hapmap2;RS=rs725559549;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	180339171	180339270	.	+	.	Name=Starch;B73v2_pos=4:175275217;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180340999	180341098	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:175277045;1allele=A/C;version=Hapmap2;RS=rs132163986;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	180344083	180344182	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:175280129;1allele=G/A;version=Hapmap2;RS=rs277552386;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	180344825	180344924	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:175280871;1allele=A/G;version=Hapmap2;RS=rs129847394;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	180419607	180419706	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:175355729;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180432320	180432419	.	+	.	Name=Starch;B73v2_pos=4:175368556;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180441831	180441930	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:175378065;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180445964	180446063	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:175382198;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180489318	180489417	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:175425081;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	180548771	180548870	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:175495606;1allele=A/G;version=Hapmap2;RS=rs830391142;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	180583851	180583950	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:175530686;1allele=T/C;version=Hapmap2;RS=rs831560950;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	180653114	180653213	.	+	.	Name=Sucrose;B73v2_pos=4:175589236;1allele=G/A;version=Hapmap2;RS=rs802130331;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	180788635	180788734	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:175723720;1allele=G/T;version=Hapmap2;RS=rs834231918;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	180789018	180789117	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:175724103;1allele=A/G;version=Hapmap2;RS=rs129848088;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	180797647	180797746	.	+	.	Name=Cob_diameter;B73v2_pos=4:175732732;1allele=A/T;version=Hapmap2;RS=rs277552662;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	180865807	180865906	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:175800588;1allele=T/C;version=Hapmap2;RS=rs838924454;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	180868188	180868287	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:175802969;1allele=C/T;version=Hapmap2;RS=rs819086966;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	180974372	180974471	.	+	.	Name=Fructose;B73v2_pos=4:175910946;1allele=T/C;version=Hapmap2;RS=rs813636095;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	181220664	181220763	.	+	.	Name=Leaf_length;B73v2_pos=4:176165956;1allele=G/T;version=Hapmap2;RS=rs820986965;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	181239223	181239322	.	+	.	Name=Stalk_strength;B73v2_pos=4:176184515;1allele=C/T;version=Hapmap2;RS=rs819403342;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	181257873	181257972	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:176203165;1allele=G/T;version=Hapmap2;RS=rs277553317;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	181404465	181404564	.	+	.	Name=Leaf_length;B73v2_pos=4:176357534;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	181563194	181563293	.	+	.	Name=Sucrose;B73v2_pos=4:176506613;1allele=C/T;version=Hapmap2;RS=rs1063174912;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	181601536	181601635	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:176545244;1allele=C/T;version=Hapmap2;RS=rs277553663;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	181867957	181868056	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:176818523;1allele=A/G;version=Hapmap2;RS=rs841413020;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	182107799	182107898	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:177059310;1allele=A/T;version=Hapmap2;RS=rs129849850;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	182107922	182108021	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:177059433;1allele=/CG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	182108082	182108181	.	+	.	Name=Sucrose;B73v2_pos=4:177059593;1allele=C/T;version=Hapmap2;RS=rs129849853;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182110582	182110681	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:177062093;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	182134908	182135007	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177089519;1allele=C/T;version=Hapmap2;RS=rs809227833;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182159710	182159809	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:177114199;1allele=A/G;version=Hapmap2;RS=rs821289434;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	182168022	182168121	.	+	.	Name=Height_above_ear;B73v2_pos=4:177122511;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	182169087	182169186	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:177123576;1allele=C/A;version=Hapmap2;RS=rs132165161;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182169807	182169906	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177124296;1allele=/CATGC;version=Hapmap1;RS=rs132165170;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	182191206	182191305	.	+	.	Name=Leaf_length;B73v2_pos=4:177152151;1allele=C/T;version=Hapmap2;RS=rs277554099;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182229057	182229156	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:177248489;1allele=T/C;version=Hapmap2;RS=rs849462377;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	182319150	182319249	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177325713;1allele=A/T;version=Hapmap2;RS=rs129850033;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	182321575	182321674	.	+	.	Name=Cob_diameter;B73v2_pos=4:177328138;1allele=C/T;version=Hapmap2;RS=rs132165419;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182324297	182324396	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:177330852;1allele=C/T;version=Hapmap2;RS=rs129850051;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182324723	182324822	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:177331278;1allele=CCCC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	182335628	182335727	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:177342183;1allele=C/G;version=Hapmap2;RS=rs830023584;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	182337175	182337274	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:177343730;1allele=C/T;version=Hapmap1;RS=rs132165509;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182379195	182379294	.	+	.	Name=Tassel_length;B73v2_pos=4:177438678;1allele=G/T;version=Hapmap2;RS=rs848579372;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	182380982	182381081	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:177440465;1allele=T/A;version=Hapmap1;RS=rs132165773;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	182381611	182381710	.	+	.	Name=Leaf_length;B73v2_pos=4:177441094;1allele=A/G;version=Hapmap2;RS=rs823747530;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	182438723	182438822	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177395436;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	182460195	182460294	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177373961;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	182573791	182573890	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:177577492;1allele=C/T;version=Hapmap2;RS=rs839568156;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182577228	182577327	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:177580932;1allele=C/A;version=Hapmap2;RS=rs129850446;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	182593758	182593857	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:177597432;1allele=C/T;version=Hapmap2;RS=rs132165905;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182602199	182602298	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:177605876;1allele=A/G;version=Hapmap2;RS=rs129850544;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	182633054	182633153	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:177636756;1allele=C/T;version=Hapmap1;RS=rs132166009;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	182640825	182640924	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177644522;1allele=G/A;version=Hapmap1;RS=rs132166101;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	182641375	182641474	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177645072;1allele=C/G;version=Hapmap1;RS=rs129850605;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	182643037	182643136	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177646734;1allele=C/G;version=Hapmap2;RS=rs827870004;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	182794897	182794996	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:177786412;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	182794967	182795066	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:177786342;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183012899	183012998	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:178007277;1allele=G/A;version=Hapmap2;RS=rs849734702;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183052750	183052849	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:178042627;1allele=C/G;version=Hapmap2;RS=rs132166272;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	183105286	183105385	.	+	.	Name=Total_amino_acids;B73v2_pos=4:178087494;1allele=A/G;version=Hapmap2;RS=rs804976273;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183125250	183125349	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:178131442;1allele=G/A;version=Hapmap1;RS=rs132166302;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183127602	183127701	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:178133794;1allele=T/G;version=Hapmap2;RS=rs129851420;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	183127870	183127969	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:178134062;1allele=C/T;version=Hapmap2;RS=rs843500658;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	183133284	183133383	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:178139476;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183141712	183141811	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:178147904;1allele=T/C;version=Hapmap2;RS=rs812350536;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	183147688	183147787	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:178153880;1allele=G/A;version=Hapmap1;RS=rs132166422;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183147688	183147787	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:178153880;1allele=G/A;version=Hapmap1;RS=rs132166422;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183369322	183369421	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:178382709;1allele=C/A;version=Hapmap2;RS=rs277554995;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	183369605	183369704	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:178382992;1allele=A/T;version=Hapmap1;RS=rs132166607;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	183370194	183370293	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:178383581;1allele=T/C;version=Hapmap2;RS=rs277555000;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	183370207	183370306	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:178383594;1allele=A/G;version=Hapmap2;RS=rs277555001;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183419346	183419445	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:178408097;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183430221	183430320	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:178418980;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183434803	183434902	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:178453751;1allele=G/A;version=Hapmap2;RS=rs129851777;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	183436280	183436379	.	+	.	Name=Fumarate;B73v2_pos=4:178455228;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183447108	183447207	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178466056;1allele=T/G;version=Hapmap2;RS=rs277555133;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	183449802	183449901	.	+	.	Name=Total_amino_acids;B73v2_pos=4:178468750;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183451262	183451361	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:178470210;1allele=G/C;version=Hapmap2;RS=rs129851818;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	183487630	183487729	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178497701;1allele=T/C;version=Hapmap2;RS=rs132166688;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	183492913	183493012	.	+	.	Name=Malate;B73v2_pos=4:178502984;1allele=C/T;version=Hapmap2;RS=rs277555232;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	183553829	183553928	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178563572;1allele=T/G;version=Hapmap2;RS=rs837435003;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	183561819	183561918	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:178571563;1allele=G/A;version=Hapmap2;RS=rs132166761;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	183563614	183563713	.	+	.	Name=Total_amino_acids;B73v2_pos=4:178573358;1allele=A/G;version=Hapmap2;RS=rs129851952;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	183567977	183568076	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:178577721;1allele=C/T;version=Hapmap2;RS=rs277555276;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	183568019	183568118	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:178577763;1allele=A/G;version=Hapmap2;RS=rs841819908;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	183568980	183569079	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178578722;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183569282	183569381	.	+	.	Name=Fumarate;B73v2_pos=4:178579024;1allele=A/C;version=Hapmap2;RS=rs848195566;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	183569299	183569398	.	+	.	Name=Fumarate;B73v2_pos=4:178579041;1allele=A/G;version=Hapmap2;RS=rs837521491;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183570046	183570145	.	+	.	Name=Ear_height;B73v2_pos=4:178579788;1allele=A/G;version=Hapmap2;RS=rs849840488;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	183573303	183573402	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:178583045;1allele=C/G;version=Hapmap2;RS=rs840216794;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	183578716	183578815	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:178588449;1allele=G/A;version=Hapmap2;RS=rs822969603;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183579357	183579456	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:178589090;1allele=C/G;version=Hapmap2;RS=rs129852040;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	183587256	183587355	.	+	.	Name=Fumarate;B73v2_pos=4:178596989;1allele=C/G;version=Hapmap2;RS=rs129852065;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	183587430	183587529	.	+	.	Name=Fumarate;B73v2_pos=4:178597163;1allele=A/G;version=Hapmap2;RS=rs132166935;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183588846	183588945	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:178598579;1allele=C/T;version=Hapmap2;RS=rs725322595;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	183589570	183589669	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:178599303;1allele=T/A;version=Hapmap2;RS=rs129852073;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	183603437	183603536	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:178613170;1allele=C/A;version=Hapmap2;RS=rs1063112901;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	183605888	183605987	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178615621;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183605894	183605993	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178615627;1allele=T/A;version=Hapmap2;RS=rs826175445;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	183609007	183609106	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178618740;1allele=T/C;version=Hapmap2;RS=rs829514724;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	183622828	183622927	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178632334;1allele=G/A;version=Hapmap2;RS=rs828056802;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183654949	183655048	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178701322;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183655757	183655856	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:178699769;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183689607	183689706	.	+	.	Name=Fumarate;B73v2_pos=4:178665914;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183690647	183690746	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:178664874;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183690697	183690796	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:178664824;1allele=T/C;version=Hapmap2;RS=rs808426955;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	183690751	183690850	.	+	.	Name=Malate;B73v2_pos=4:178664770;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183695770	183695869	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:178659749;1allele=AT/;version=Hapmap1;RS=rs834437753;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	183698315	183698414	.	+	.	Name=Fumarate;B73v2_pos=4:178657204;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183726503	183726602	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:178734917;1allele=G/T;version=Hapmap2;RS=rs846948459;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	183729035	183729134	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:178737449;1allele=A/C;version=Hapmap2;RS=rs726746105;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	183731700	183731799	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:178740114;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	183746309	183746408	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:178755623;1allele=T/C;version=Hapmap2;RS=rs832761096;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	183775855	183775954	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:178786003;1allele=G/A;version=Hapmap2;RS=rs1063483164;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	183819894	183819993	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:178834409;1allele=T/C;version=Hapmap2;RS=rs129852311;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	183849851	183849950	.	+	.	Name=Ear_height;B73v2_pos=4:178859740;1allele=G/A;version=Hapmap2;RS=rs277555584;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	183876341	183876440	.	+	.	Name=Ear_height;B73v2_pos=4:178886723;1allele=C/A;version=Hapmap2;RS=rs129852361;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	183876944	183877043	.	+	.	Name=Ear_height;B73v2_pos=4:178887326;1allele=C/T;version=Hapmap2;RS=rs129852363;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	183972233	183972332	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:178980999;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184057801	184057898	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:179059718;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184200304	184200402	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:179201199;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184286868	184286967	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:179315906;1allele=T/G;version=Hapmap2;RS=rs832006271;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	184286873	184286972	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:179315911;1allele=T/C;version=Hapmap2;RS=rs726959142;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	184498618	184498717	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:179548542;1allele=G/A;version=Hapmap2;RS=rs850364519;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	184555598	184555697	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:179605521;1allele=A/C;version=Hapmap2;RS=rs816119269;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	184556618	184556717	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:179606541;1allele=C/T;version=Hapmap2;RS=rs809586485;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	184562933	184563032	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:179612856;1allele=A/G;version=Hapmap2;RS=rs129852744;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	184563143	184563242	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:179613066;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184567418	184567517	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:179617341;1allele=A/G;version=Hapmap1;RS=rs132167745;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184569482	184569581	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:179619405;1allele=G/T;version=Hapmap2;RS=rs129852786;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	184592986	184593085	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:179646536;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184611972	184612071	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:179664866;1allele=T/A;version=Hapmap2;RS=rs132167949;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	184612513	184612612	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:179665407;1allele=/GG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184657010	184657109	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:179707967;1allele=C/T;version=Hapmap2;RS=rs277556446;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	184657418	184657517	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:179708375;1allele=C/T;version=Hapmap2;RS=rs726097349;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	184659267	184659366	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:179710224;1allele=G/C;version=Hapmap2;RS=rs132167973;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	184659267	184659366	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:179710224;1allele=G/C;version=Hapmap2;RS=rs132167973;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	184659357	184659456	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:179710314;1allele=A/G;version=Hapmap2;RS=rs132167975;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184675796	184675895	.	+	.	Name=Plant_height;B73v2_pos=4:179717051;1allele=A/C;version=Hapmap2;RS=rs277556503;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184677159	184677258	.	+	.	Name=Leaf_length;B73v2_pos=4:179715688;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184678796	184678895	.	+	.	Name=Tassel_length;B73v2_pos=4:179732187;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184688336	184688435	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:179741742;1allele=A/G;version=Hapmap2;RS=rs845206025;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184693188	184693287	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:179746594;1allele=G/A;version=Hapmap2;RS=rs810013279;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	184706745	184706844	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:179760875;1allele=T/C;version=Hapmap2;RS=rs821817865;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	184712682	184712781	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:179766812;1allele=A/G;version=Hapmap2;RS=rs129853035;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184714075	184714174	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:179768205;1allele=C/T;version=Hapmap2;RS=rs132168037;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	184731664	184731763	.	+	.	Name=Fumarate;B73v2_pos=4:179785709;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	184732988	184733087	.	+	.	Name=Leaf_length;B73v2_pos=4:179787033;1allele=G/C;version=Hapmap1;RS=rs816590925;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	184733463	184733562	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:179787508;1allele=A/C;version=Hapmap1;RS=rs132168071;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184735934	184736033	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:179789979;1allele=G/A;version=Hapmap2;RS=rs822478557;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	184737688	184737787	.	+	.	Name=Plant_height;B73v2_pos=4:179791733;1allele=A/G;version=Hapmap2;RS=rs129853144;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184737874	184737973	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:179791919;1allele=T/C;version=Hapmap2;RS=rs129853147;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	184738169	184738268	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:179792214;1allele=A/-;version=Hapmap1;RS=rs132168105;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	184742130	184742229	.	+	.	Name=Fumarate;B73v2_pos=4:179796175;1allele=G/A;version=Hapmap2;RS=rs1062710321;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184747587	184747686	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=4:179801628;1allele=G/C;version=Hapmap1;RS=rs132168191;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	184751542	184751641	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:179805583;1allele=C/G;version=Hapmap2;RS=rs724274453;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	184769185	184769284	.	+	.	Name=Ear_height;B73v2_pos=4:179823226;1allele=T/C;version=Hapmap1;RS=rs132168263;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	184769530	184769629	.	+	.	Name=Tassel_length;B73v2_pos=4:179823571;1allele=T/C;version=Hapmap2;RS=rs277556707;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	184769798	184769897	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:179823839;1allele=A/G;version=Hapmap2;RS=rs821803603;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	184770025	184770124	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:179824066;1allele=A/C;version=Hapmap2;RS=rs277556716;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	184853924	184854023	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:179908305;1allele=T/C;version=Hapmap1;RS=rs132168278;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	184917168	184917267	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:179971555;1allele=C/T;version=Hapmap2;RS=rs827086759;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	184973791	184973890	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:180028182;1allele=A/T;version=Hapmap2;RS=rs805425610;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	185156736	185156835	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:180206975;1allele=C/G;version=Hapmap2;RS=rs837532548;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	185158131	185158230	.	+	.	Name=Fumarate;B73v2_pos=4:180208370;1allele=T/C;version=Hapmap2;RS=rs129853580;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	185224430	185224529	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:180270820;1allele=G/T;version=Hapmap1;RS=rs132168540;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	185224930	185225029	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:180271320;1allele=C/G;version=Hapmap2;RS=rs277557249;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	185224932	185225031	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:180271322;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	185249698	185249797	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:180323007;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	185255400	185255499	.	+	.	Name=Ear_height;B73v2_pos=4:180300568;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	185290082	185290181	.	+	.	Name=Plant_height;B73v2_pos=4:180330776;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	185328950	185329049	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:180376039;1allele=G/A;version=Hapmap2;RS=rs840045849;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	185329224	185329323	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:180376309;1allele=A/C;version=Hapmap2;RS=rs817841378;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	185372539	185372638	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:180426472;1allele=G/A;version=Hapmap2;RS=rs277557322;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	185374921	185375020	.	+	.	Name=Plant_height;B73v2_pos=4:180428854;1allele=A/G;version=Hapmap2;RS=rs843988019;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	185376040	185376139	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:180429973;1allele=G/A;version=Hapmap2;RS=rs847045562;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	185387133	185387232	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:180443316;1allele=T/C;version=Hapmap1;RS=rs132168695;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	185387938	185388037	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:180444121;1allele=G/T;version=Hapmap1;RS=rs132168706;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	185439632	185439731	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:180495814;1allele=G/C;version=Hapmap2;RS=rs834144289;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	185482640	185482739	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:180539376;1allele=C/T;version=Hapmap2;RS=rs821365940;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	185596155	185596254	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:180650447;1allele=C/G;version=Hapmap2;RS=rs277557574;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	185600616	185600715	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:180654908;1allele=T/A;version=Hapmap2;RS=rs820987352;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	185607725	185607824	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:180673095;1allele=G/A;version=Hapmap1;RS=rs132168978;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	185648717	185648814	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:180720133;1allele=T/A;version=Hapmap2;RS=rs823630636;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	185708438	185708537	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:180774127;1allele=C/A;version=Hapmap1;RS=rs132169029;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	185830684	185830783	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:180887887;1allele=G/C;version=Hapmap2;RS=rs132169147;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	185832284	185832383	.	+	.	Name=Leaf_length;B73v2_pos=4:180889487;1allele=A/T;version=Hapmap2;RS=rs725148758;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	185833133	185833232	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:180890336;1allele=C/T;version=Hapmap2;RS=rs277557665;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	185838354	185838453	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:180895557;1allele=C/T;version=Hapmap2;RS=rs132169167;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	185885213	185885312	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:180942770;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	185984089	185984188	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181049939;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	186009272	186009371	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:181125747;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	186053647	186053746	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:181107636;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	186150321	186150420	.	+	.	Name=Chlorophyll_A;B73v2_pos=4:181222542;1allele=C/T;version=Hapmap2;RS=rs838479545;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186151458	186151557	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:181223679;1allele=C/T;version=Hapmap2;RS=rs840608702;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186154937	186155036	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:181227158;1allele=T/C;version=Hapmap2;RS=rs129854530;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186157429	186157528	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181229650;1allele=G/T;version=Hapmap2;RS=rs277557836;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	186160942	186161041	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181233163;1allele=C/T;version=Hapmap2;RS=rs824208588;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186161519	186161618	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:181233740;1allele=A/G;version=Hapmap2;RS=rs803807389;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	186161572	186161671	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:181233793;1allele=G/A;version=Hapmap2;RS=rs823175379;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	186179567	186179666	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:181256770;1allele=C/T;version=Hapmap2;RS=rs132169347;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186181985	186182084	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:181259188;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	186184821	186184920	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181262024;1allele=G/A;version=Hapmap2;RS=rs845902007;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	186277925	186278024	.	+	.	Name=Nitrate;B73v2_pos=4:181338235;1allele=T/C;version=Hapmap2;RS=rs840107584;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	186361998	186362097	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:181422316;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	186367267	186367366	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181427585;1allele=G/T;version=Hapmap2;RS=rs129854742;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	186369098	186369197	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:181429416;1allele=G/T;version=Hapmap2;RS=rs849451711;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	186370225	186370324	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181430543;1allele=G/A;version=Hapmap1;RS=rs132169570;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	186374461	186374560	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181434779;1allele=G/A;version=Hapmap2;RS=rs813538710;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	186390632	186390731	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181450950;1allele=A/G;version=Hapmap2;RS=rs806968878;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	186390984	186391083	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181451302;1allele=A/G;version=Hapmap2;RS=rs809523952;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	186409789	186409888	.	+	.	Name=Fumarate;B73v2_pos=4:181492551;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	186448547	186448646	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181515333;1allele=C/T;version=Hapmap2;RS=rs836455317;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186450424	186450523	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:181517210;1allele=C/T;version=Hapmap2;RS=rs844117916;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186499906	186500005	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:181566697;1allele=A/G;version=Hapmap2;RS=rs801964499;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	186544169	186544268	.	+	.	Name=Leaf_length;B73v2_pos=4:181610741;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	186570610	186570709	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:181632465;1allele=C/T;version=Hapmap2;RS=rs836081407;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186602788	186602887	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:181664645;1allele=C/T;version=Hapmap2;RS=rs277558398;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186603933	186604032	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:181665790;1allele=T/G;version=Hapmap2;RS=rs842041617;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	186605971	186606070	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:181667828;1allele=A/G;version=Hapmap2;RS=rs725036574;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	186607288	186607387	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:181669145;1allele=A/G;version=Hapmap2;RS=rs129855121;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	186753349	186753448	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:181815308;1allele=C/T;version=Hapmap2;RS=rs810138743;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186790013	186790112	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:181870816;1allele=T/C;version=Hapmap2;RS=rs129855576;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186793473	186793572	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:181874276;1allele=C/T;version=Hapmap2;RS=rs277558839;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186797762	186797861	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:181878565;1allele=C/A;version=Hapmap2;RS=rs817062750;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	186811170	186811269	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:181891973;1allele=C/A;version=Hapmap2;RS=rs277558921;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	186816012	186816111	.	+	.	Name=Tassel_length;B73v2_pos=4:181896815;1allele=C/T;version=Hapmap1;RS=rs277558939;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	187303698	187303797	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:182016828;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	187349014	187349113	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:181997871;1allele=C/T;version=Hapmap2;RS=rs277558984;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	187350849	187350948	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:181999706;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	187357889	187357988	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:182006746;1allele=G/T;version=Hapmap2;RS=rs849165533;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	187362289	187362388	.	+	.	Name=Leaf_length;B73v2_pos=4:182011146;1allele=A/T;version=Hapmap2;RS=rs277559016;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	187362799	187362898	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:182011656;1allele=C/A;version=Hapmap2;RS=rs820365169;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	187362867	187362966	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:182011724;1allele=C/T;version=Hapmap2;RS=rs829827157;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	187381349	187381448	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:182047633;1allele=G/A;version=Hapmap2;RS=rs836353429;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	187389061	187389160	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:182055345;1allele=A/G;version=Hapmap2;RS=rs848290159;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	187408356	187408455	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:182074890;1allele=G/A;version=Hapmap2;RS=rs841923319;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	187408431	187408530	.	+	.	Name=Ear_height;B73v2_pos=4:182074965;1allele=C/T;version=Hapmap2;RS=rs818114671;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	187461374	187461473	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:182125801;1allele=C/G;version=Hapmap2;RS=rs815112765;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	187478918	187479017	.	+	.	Name=Ear_height;B73v2_pos=4:182142609;1allele=T/C;version=Hapmap2;RS=rs823072772;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	187517869	187517968	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:182196747;1allele=G/A;version=Hapmap2;RS=rs129855898;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	187632475	187632574	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:182289068;1allele=A/T;version=Hapmap2;RS=rs132170425;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	187642952	187643051	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:182299546;1allele=-/+;version=Hapmap2;RS=rs725058340;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	187669401	187669500	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:182326220;1allele=A/G;version=Hapmap2;RS=rs805051317;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	187727418	187727517	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:182381588;1allele=G/A;version=Hapmap2;RS=rs840637172;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	187768884	187768984	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:182427954;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	187831166	187831265	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:182489897;1allele=A/C;version=Hapmap2;RS=rs277559508;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	187873226	187873325	.	+	.	Name=Tassel_length;B73v2_pos=4:182531965;1allele=A/G;version=Hapmap2;RS=rs826779412;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	187881307	187881406	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:182540046;1allele=T/C;version=Hapmap2;RS=rs1064773437;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	187950705	187950804	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:182609450;1allele=G/A;version=Hapmap2;RS=rs843160136;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	187950761	187950860	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:182609506;1allele=A/G;version=Hapmap2;RS=rs848898473;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	187971532	187971631	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:182630278;1allele=A/C;version=Hapmap2;RS=rs834480566;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	187972333	187972432	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:182631079;1allele=G/A;version=Hapmap2;RS=rs823133087;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	187972652	187972751	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:182631398;1allele=A/G;version=Hapmap2;RS=rs837066207;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	188000190	188000289	.	+	.	Name=Leaf_length;B73v2_pos=4:182658936;1allele=T/G;version=Hapmap2;RS=rs837028957;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	188023258	188023357	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:182682004;1allele=A/G;version=Hapmap2;RS=rs801738602;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	188151722	188151821	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:182802658;1allele=C/T;version=Hapmap2;RS=rs848430311;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	188277875	188277974	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:182927272;1allele=A/G;version=Hapmap2;RS=rs811766647;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	188399767	188399866	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:183049333;1allele=T/C;version=Hapmap2;RS=rs727223479;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	188484825	188484924	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:183134394;1allele=T/C;version=Hapmap2;RS=rs804713376;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	188557690	188557789	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:183204501;1allele=T/C;version=Hapmap2;RS=rs839661951;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	188560229	188560328	.	+	.	Name=Ear_height;B73v2_pos=4:183207041;1allele=G/A;version=Hapmap2;RS=rs812197933;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	188564884	188564983	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:183211696;1allele=G/A;version=Hapmap2;RS=rs129858358;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	188739949	188740048	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:183398497;1allele=T/A;version=Hapmap2;RS=rs129858489;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	188753918	188754017	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:183412466;1allele=C/T;version=Hapmap2;RS=rs821186189;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	188756412	188756511	.	+	.	Name=Leaf_length;B73v2_pos=4:183414960;1allele=A/T;version=Hapmap2;RS=rs831496691;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	188947626	188947725	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:183587098;1allele=G/A;version=Hapmap2;RS=rs824090820;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	188953002	188953101	.	+	.	Name=Leaf_length;B73v2_pos=4:183592474;1allele=C/G;version=Hapmap2;RS=rs129858574;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	188960602	188960701	.	+	.	Name=Ear_height;B73v2_pos=4:183600074;1allele=G/T;version=Hapmap2;RS=rs815839967;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	188980101	188980200	.	+	.	Name=Ear_height;B73v2_pos=4:183646078;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	189103228	189103327	.	+	.	Name=Leaf_length;B73v2_pos=4:183738711;1allele=A/G;version=Hapmap2;RS=rs129858740;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	189280088	189280187	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:183897231;1allele=G/A;version=Hapmap2;RS=rs822107486;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	189299797	189299896	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:183908391;1allele=G/A;version=Hapmap2;RS=rs129858885;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	189299797	189299896	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:183908391;1allele=G/A;version=Hapmap2;RS=rs129858885;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	189301775	189301874	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:183910369;1allele=GGT/;version=Hapmap1;RS=rs129858902;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	189313255	189313354	.	+	.	Name=Leaf_length;B73v2_pos=4:183921854;1allele=C/T;version=Hapmap1;RS=rs132171460;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	189314107	189314206	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:183922706;1allele=G/A;version=Hapmap1;RS=rs129858954;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	189318889	189318988	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:183927489;1allele=/CGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	189334966	189335065	.	+	.	Name=Plant_height;B73v2_pos=4:183943567;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	189371330	189371429	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:183980123;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	189513254	189513353	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:184123857;1allele=A/G;version=Hapmap2;RS=rs834752047;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	189937396	189937495	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:184546570;1allele=/AGCCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	189942198	189942297	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:184551372;1allele=T/C;version=Hapmap2;RS=rs726736166;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	190069202	190069301	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:184663295;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	190175617	190175716	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:184782569;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	190237930	190238029	.	+	.	Name=Ear_height;B73v2_pos=4:184844876;1allele=G/C;version=Hapmap2;RS=rs132172114;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	190435737	190435836	.	+	.	Name=Ear_height;B73v2_pos=4:185040491;1allele=G/A;version=Hapmap2;RS=rs824857289;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	190464545	190464644	.	+	.	Name=Ear_height;B73v2_pos=4:185069378;1allele=A/G;version=Hapmap2;RS=rs821127602;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	190575749	190575848	.	+	.	Name=Leaf_length;B73v2_pos=4:185186243;1allele=T/A;version=Hapmap2;RS=rs277563007;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	190713172	190713271	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:185326965;1allele=T/C;version=Hapmap2;RS=rs813396639;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	190766174	190766273	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:185379014;1allele=T/C;version=Hapmap2;RS=rs816571428;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	190775233	190775332	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:185388069;1allele=T/C;version=Hapmap2;RS=rs843540460;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	190835259	190835358	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:185441196;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	190835286	190835385	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:185441223;1allele=C/T;version=Hapmap2;RS=rs129860552;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	190868684	190868783	.	+	.	Name=Plant_height;B73v2_pos=4:185473295;1allele=T/C;version=Hapmap2;RS=rs129860591;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	190869794	190869893	.	+	.	Name=Leaf_length;B73v2_pos=4:185474405;1allele=T/C;version=Hapmap2;RS=rs277563304;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	190928138	190928237	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:185521378;1allele=G/A;version=Hapmap2;RS=rs132172842;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	190928202	190928301	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:185521442;1allele=/CCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	190928248	190928347	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:185521488;1allele=/GCATG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	191130525	191130624	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:185726278;1allele=A/G;version=Hapmap2;RS=rs808977893;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	191131667	191131766	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:185727420;1allele=C/A;version=Hapmap1;RS=rs132173329;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	191135537	191135636	.	+	.	Name=Height_above_ear;B73v2_pos=4:185731290;1allele=A/G;version=Hapmap2;RS=rs129861083;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	191137445	191137544	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:185733198;1allele=T/G;version=Hapmap2;RS=rs129861093;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	191137751	191137850	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:185733504;1allele=C/A;version=Hapmap2;RS=rs129861097;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	191137802	191137901	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:185733555;1allele=A/T;version=Hapmap2;RS=rs277563842;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	191166336	191166435	.	+	.	Name=Ear_height;B73v2_pos=4:185762089;1allele=G/A;version=Hapmap2;RS=rs817696445;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	191166336	191166435	.	+	.	Name=Plant_height;B73v2_pos=4:185762089;1allele=G/A;version=Hapmap2;RS=rs817696445;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	191443249	191443348	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:186047438;1allele=T/C;version=Hapmap2;RS=rs820939660;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	191493834	191493933	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:186115648;1allele=T/G;version=Hapmap2;RS=rs845550099;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	191682348	191682447	.	+	.	Name=Leaf_length;B73v2_pos=4:186275346;1allele=A/C;version=Hapmap2;RS=rs726366182;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	191861690	191861789	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:186462919;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	192248130	192248229	.	+	.	Name=Leaf_length;B73v2_pos=4:186829623;1allele=T/C;version=Hapmap2;RS=rs814622699;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	192253072	192253171	.	+	.	Name=Leaf_length;B73v2_pos=4:186834910;1allele=T/C;version=Hapmap2;RS=rs817168217;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	192267460	192267559	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:186848386;1allele=A/G;version=Hapmap2;RS=rs277564997;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	192279793	192279892	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:186860719;1allele=A/G;version=Hapmap2;RS=rs277565017;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	192364571	192364670	.	+	.	Name=Tassel_length;B73v2_pos=4:186954402;1allele=T/C;version=Hapmap2;RS=rs129862924;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	192397286	192397385	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:186988290;1allele=G/C;version=Hapmap2;RS=rs1062966772;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	192450999	192451098	.	+	.	Name=Tassel_length;B73v2_pos=4:187045917;1allele=A/G;version=Hapmap2;RS=rs844777895;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	192451070	192451169	.	+	.	Name=Tassel_length;B73v2_pos=4:187045988;1allele=A/G;version=Hapmap2;RS=rs849129412;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	192451494	192451593	.	+	.	Name=Tassel_length;B73v2_pos=4:187046412;1allele=C/T;version=Hapmap2;RS=rs846358172;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	192451525	192451624	.	+	.	Name=Tassel_length;B73v2_pos=4:187046443;1allele=C/T;version=Hapmap1;RS=rs132174639;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	192529273	192529372	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:254723182;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	192678959	192679058	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:187267228;1allele=G/A;version=Hapmap2;RS=rs132175758;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	192680179	192680278	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:187268448;1allele=G/A;version=Hapmap2;RS=rs277565378;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	192680895	192680994	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:187269164;1allele=C/T;version=Hapmap2;RS=rs806347052;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	192681128	192681227	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:187269397;1allele=A/G;version=Hapmap2;RS=rs277565387;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	192681163	192681262	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:187269432;1allele=T/C;version=Hapmap2;RS=rs277565389;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	192683790	192683889	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:187272060;1allele=A/G;version=Hapmap2;RS=rs808699058;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	192683853	192683952	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:187272123;1allele=T/A;version=Hapmap2;RS=rs806418114;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	192684284	192684383	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:187272554;1allele=G/A;version=Hapmap2;RS=rs725836634;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	192982569	192982668	.	+	.	Name=Ear_height;B73v2_pos=4:187583724;1allele=G/A;version=Hapmap2;RS=rs843977944;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	192982569	192982668	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:187583724;1allele=G/A;version=Hapmap2;RS=rs843977944;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	193003146	193003245	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:187604300;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193055490	193055589	.	+	.	Name=Ear_height;B73v2_pos=4:187657534;1allele=T/C;version=Hapmap2;RS=rs1063129944;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	193102076	193102175	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:187704443;1allele=C/T;version=Hapmap2;RS=rs277566220;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	193135407	193135506	.	+	.	Name=Plant_height;B73v2_pos=4:187737749;1allele=C/A;version=Hapmap2;RS=rs818645788;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	193149752	193149851	.	+	.	Name=Plant_height;B73v2_pos=4:187752094;1allele=C/G;version=Hapmap2;RS=rs817936037;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	193150353	193150452	.	+	.	Name=Plant_height;B73v2_pos=4:187752695;1allele=G/T;version=Hapmap2;RS=rs833415699;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	193193776	193193875	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:187843820;1allele=C/A;version=Hapmap2;RS=rs814238034;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	193264611	193264710	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:187878754;1allele=A/T;version=Hapmap2;RS=rs844516283;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	193265197	193265296	.	+	.	Name=Tassel_length;B73v2_pos=4:187879340;1allele=T/G;version=Hapmap2;RS=rs804273361;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	193265335	193265434	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:187879478;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193273426	193273525	.	+	.	Name=Leaf_width;B73v2_pos=4:187887565;1allele=G/T;version=Hapmap2;RS=rs131181154;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	193284915	193285014	.	+	.	Name=Leaf_width;B73v2_pos=4:187899056;1allele=A/G;version=Hapmap2;RS=rs817828446;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	193392351	193392450	.	+	.	Name=Plant_height;B73v2_pos=4:188005313;1allele=G/A;version=Hapmap2;RS=rs802464199;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	193405860	193405959	.	+	.	Name=Plant_height;B73v2_pos=4:188018822;1allele=G/A;version=Hapmap2;RS=rs844861896;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	193432194	193432293	.	+	.	Name=Plant_height;B73v2_pos=4:188044488;1allele=A/G;version=Hapmap2;RS=rs824389713;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	193876528	193876627	.	+	.	Name=Leaf_length;B73v2_pos=4:188329016;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193878156	193878255	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188327388;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193880996	193881095	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:188324548;1allele=/GG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193893239	193893338	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:188311357;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193974767	193974866	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188228828;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193985061	193985160	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188218535;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193989033	193989132	.	+	.	Name=Tassel_length;B73v2_pos=4:188214563;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193989574	193989673	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188214022;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193993649	193993748	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:188209947;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	193999744	193999843	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188203850;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	194004845	194004944	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188198741;1allele=AAAC/;version=Hapmap1;RS=rs132176327;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	194013328	194013427	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188190393;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	194013328	194013427	.	+	.	Name=Plant_height;B73v2_pos=4:188190393;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	194051003	194051102	.	+	.	Name=Ear_height;B73v2_pos=4:188152706;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	194051003	194051102	.	+	.	Name=Plant_height;B73v2_pos=4:188152706;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	194079021	194079120	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188124682;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	194474636	194474735	.	+	.	Name=Tassel_length;B73v2_pos=4:188387590;1allele=G/A;version=Hapmap2;RS=rs129868213;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	194499983	194500082	.	+	.	Name=Tassel_length;B73v2_pos=4:188412938;1allele=T/C;version=Hapmap2;RS=rs1064754515;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	194500000	194500099	.	+	.	Name=Tassel_length;B73v2_pos=4:188412955;1allele=A/G;version=Hapmap2;RS=rs129868271;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	194505863	194505962	.	+	.	Name=Tassel_length;B73v2_pos=4:188418818;1allele=A/G;version=Hapmap2;RS=rs1063067437;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	194507869	194507968	.	+	.	Name=Tassel_length;B73v2_pos=4:188420824;1allele=C/T;version=Hapmap2;RS=rs810413063;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	194535336	194535435	.	+	.	Name=Tassel_length;B73v2_pos=4:188448291;1allele=T/G;version=Hapmap2;RS=rs277566961;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	194554016	194554115	.	+	.	Name=Tassel_length;B73v2_pos=4:188466975;1allele=T/C;version=Hapmap2;RS=rs727261678;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	194555089	194555188	.	+	.	Name=Tassel_length;B73v2_pos=4:188468048;1allele=T/C;version=Hapmap2;RS=rs129868358;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	194571608	194571707	.	+	.	Name=Tassel_length;B73v2_pos=4:188484567;1allele=C/T;version=Hapmap2;RS=rs277567008;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	194614299	194614398	.	+	.	Name=Plant_height;B73v2_pos=4:188527159;1allele=T/C;version=Hapmap2;RS=rs847857471;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	194639882	194639981	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188554692;1allele=G/A;version=Hapmap2;RS=rs824441300;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	194735963	194736062	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188652581;1allele=G/A;version=Hapmap2;RS=rs834788160;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	194735963	194736062	.	+	.	Name=Plant_height;B73v2_pos=4:188652581;1allele=G/A;version=Hapmap2;RS=rs834788160;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	194781299	194781398	.	+	.	Name=Tassel_length;B73v2_pos=4:188697572;1allele=C/T;version=Hapmap2;RS=rs818252456;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	194869699	194869798	.	+	.	Name=Tassel_length;B73v2_pos=4:188785698;1allele=A/G;version=Hapmap2;RS=rs847189212;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	194916158	194916257	.	+	.	Name=Tassel_length;B73v2_pos=4:188844353;1allele=G/A;version=Hapmap2;RS=rs822309349;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	194931796	194931895	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:188859993;1allele=G/C;version=Hapmap2;RS=rs831371552;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	194934997	194935096	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:188863194;1allele=G/C;version=Hapmap2;RS=rs808658173;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	194957729	194957828	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:188874508;1allele=A/G;version=Hapmap1;RS=rs132177002;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	194960755	194960854	.	+	.	Name=Cob_diameter;B73v2_pos=4:188877535;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	195039002	195039101	.	+	.	Name=Leaf_length;B73v2_pos=4:189083349;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	195119859	195119958	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:189043184;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	195131220	195131319	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189031823;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	195131356	195131455	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189031687;1allele=G/A;version=Hapmap2;RS=rs818066576;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	195145365	195145464	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189017677;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	195279550	195279649	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189184120;1allele=C/T;version=Hapmap2;RS=rs813659155;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	195294456	195294555	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189199483;1allele=T/C;version=Hapmap2;RS=rs837444181;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	195325419	195325518	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:189225690;1allele=A/G;version=Hapmap2;RS=rs845737903;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	195325690	195325789	.	+	.	Name=Ear_height;B73v2_pos=4:189225961;1allele=A/C;version=Hapmap2;RS=rs809474374;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	195325690	195325789	.	+	.	Name=Plant_height;B73v2_pos=4:189225961;1allele=A/C;version=Hapmap2;RS=rs809474374;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	195328753	195328852	.	+	.	Name=Plant_height;B73v2_pos=4:189229024;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	195487196	195487295	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:189389428;1allele=T/C;version=Hapmap2;RS=rs833510559;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	195502886	195502985	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:189405119;1allele=C/T;version=Hapmap2;RS=rs805989750;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	195511124	195511223	.	+	.	Name=Starch;B73v2_pos=4:189413357;1allele=T/C;version=Hapmap2;RS=rs277569101;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	195518102	195518201	.	+	.	Name=Leaf_length;B73v2_pos=4:189420335;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	195529737	195529836	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:189431977;1allele=G/C;version=Hapmap2;RS=rs132177486;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	195531770	195531869	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189434012;1allele=T/C;version=Hapmap2;RS=rs129870318;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	195682266	195682365	.	+	.	Name=Leaf_width;B73v2_pos=4:189586953;1allele=G/A;version=Hapmap2;RS=rs809869083;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	195941347	195941446	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:189854941;1allele=T/C;version=Hapmap2;RS=rs814378413;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	195984232	195984331	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189899461;1allele=C/G;version=Hapmap2;RS=rs821311431;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	195984248	195984347	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:189899477;1allele=C/G;version=Hapmap2;RS=rs844700653;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	196116914	196117013	.	+	.	Name=Leaf_length;B73v2_pos=4:190105596;1allele=G/T;version=Hapmap2;RS=rs843021396;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	196174859	196174958	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:190050096;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	196286392	196286491	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:190229943;1allele=T/A;version=Hapmap2;RS=rs129871111;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	196311534	196311633	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:190255085;1allele=C/T;version=Hapmap2;RS=rs277570505;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	196444030	196444129	.	+	.	Name=Leaf_length;B73v2_pos=4:190356333;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	196463757	196463856	.	+	.	Name=Starch;B73v2_pos=4:190376060;1allele=G/C;version=Hapmap2;RS=rs828498789;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	196600353	196600452	.	+	.	Name=Leaf_length;B73v2_pos=4:190499355;1allele=C/T;version=Hapmap2;RS=rs825069860;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	196639456	196639555	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:190556908;1allele=A/G;version=Hapmap2;RS=rs833488816;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	197009816	197009915	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:190896837;1allele=A/C;version=Hapmap2;RS=rs1062030404;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	197055840	197055939	.	+	.	Name=Tassel_length;B73v2_pos=4:190942990;1allele=A/G;version=Hapmap2;RS=rs277571601;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	197071196	197071295	.	+	.	Name=Tassel_length;B73v2_pos=4:190958346;1allele=C/A;version=Hapmap2;RS=rs277571733;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	197074877	197074976	.	+	.	Name=Days_to_silk;B73v2_pos=4:190962027;1allele=A/G;version=Hapmap1;RS=rs132178511;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	197203274	197203373	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:191080711;1allele=C/T;version=Hapmap2;RS=rs808032064;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	197205633	197205732	.	+	.	Name=Leaf_length;B73v2_pos=4:191083070;1allele=C/T;version=Hapmap2;RS=rs810898275;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	197233405	197233504	.	+	.	Name=Starch;B73v2_pos=4:191110613;1allele=G/A;version=Hapmap2;RS=rs129872652;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	197241040	197241139	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:191118248;1allele=T/G;version=Hapmap2;RS=rs829570667;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	197246262	197246361	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:191123470;1allele=G/A;version=Hapmap2;RS=rs129872737;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	197256920	197257019	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:191134131;1allele=A/G;version=Hapmap2;RS=rs829996225;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	197282007	197282106	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:191193263;1allele=G/T;version=Hapmap2;RS=rs129872826;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	197296871	197296970	.	+	.	Name=Leaf_length;B73v2_pos=4:191208130;1allele=T/G;version=Hapmap2;RS=rs827381099;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	197333992	197334091	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:191180574;1allele=G/A;version=Hapmap2;RS=rs828001820;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	197371305	197371404	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:191246184;1allele=A/T;version=Hapmap2;RS=rs809173224;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	197398950	197399049	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:191273829;1allele=A/G;version=Hapmap2;RS=rs129873046;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	197437024	197437123	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:191311902;1allele=A/G;version=Hapmap2;RS=rs132178850;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	197502248	197502347	.	+	.	Name=Cob_diameter;B73v2_pos=4:191376940;1allele=A/G;version=Hapmap2;RS=rs129873217;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	197551042	197551141	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:191425740;1allele=G/A;version=Hapmap2;RS=rs129873501;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	197622153	197622252	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:191492106;1allele=G/A;version=Hapmap2;RS=rs849529211;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	197642300	197642399	.	+	.	Name=Tassel_length;B73v2_pos=4:191523770;1allele=A/G;version=Hapmap2;RS=rs833188338;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	197673919	197674018	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:191538581;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	197856929	197857028	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:191722186;1allele=A/T;version=Hapmap2;RS=rs277573244;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	197869696	197869795	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:191734877;1allele=A/G;version=Hapmap2;RS=rs848224735;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	197870341	197870440	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:191735522;1allele=G/A;version=Hapmap2;RS=rs831009251;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	197880726	197880825	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:191745908;1allele=C/T;version=Hapmap2;RS=rs826073254;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	198256446	198256545	.	+	.	Name=Tassel_length;B73v2_pos=4:192102363;1allele=A/G;version=Hapmap2;RS=rs828744247;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	198353980	198354079	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:192198366;1allele=C/T;version=Hapmap2;RS=rs833387388;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	198364132	198364231	.	+	.	Name=Cob_diameter;B73v2_pos=4:192208519;1allele=C/G;version=Hapmap2;RS=rs844581697;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	198384168	198384267	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:192228557;1allele=T/C;version=Hapmap2;RS=rs277574451;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	198409439	198409538	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:192252851;1allele=A/T;version=Hapmap2;RS=rs816390535;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	198449211	198449310	.	+	.	Name=Leaf_length;B73v2_pos=4:192292790;1allele=T/C;version=Hapmap2;RS=rs839888658;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	198553344	198553443	.	+	.	Name=Tassel_length;B73v2_pos=4:192391866;1allele=C/T;version=Hapmap2;RS=rs802133500;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	198553353	198553452	.	+	.	Name=Tassel_length;B73v2_pos=4:192391875;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	198569966	198570065	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:192408488;1allele=G/C;version=Hapmap2;RS=rs811523020;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	198571564	198571663	.	+	.	Name=Plant_height;B73v2_pos=4:192410086;1allele=C/A;version=Hapmap2;RS=rs277575086;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	198682146	198682245	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:192521805;1allele=T/G;version=Hapmap2;RS=rs726791815;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	198785747	198785846	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:192630024;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	198817552	198817651	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:192649816;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	198882957	198883056	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:192715049;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	198885733	198885832	.	+	.	Name=Leaf_width;B73v2_pos=4:192717826;1allele=C/T;version=Hapmap2;RS=rs129875802;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	198889330	198889429	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:192721423;1allele=C/T;version=Hapmap2;RS=rs129875851;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	198889508	198889607	.	+	.	Name=Cob_diameter;B73v2_pos=4:192721601;1allele=A/T;version=Hapmap2;RS=rs277575793;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	198891150	198891249	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:192723243;1allele=G/A;version=Hapmap2;RS=rs129875869;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	198897988	198898087	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:192730081;1allele=G/A;version=Hapmap2;RS=rs277575915;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	198911220	198911319	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:192743313;1allele=G/A;version=Hapmap2;RS=rs848022627;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	198940498	198940597	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:192771079;1allele=C/T;version=Hapmap2;RS=rs277576041;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	198983745	198983844	.	+	.	Name=Cob_diameter;B73v2_pos=4:192813201;1allele=G/A;version=Hapmap2;RS=rs277576205;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	199078114	199078213	.	+	.	Name=Leaf_width;B73v2_pos=4:192907627;1allele=T/G;version=Hapmap2;RS=rs838086756;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	199352234	199352333	.	+	.	Name=Days_to_silk;B73v2_pos=4:193190672;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	199352475	199352574	.	+	.	Name=Days_to_silk;B73v2_pos=4:193190913;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	199357936	199358035	.	+	.	Name=Days_to_silk;B73v2_pos=4:193196436;1allele=T/A;version=Hapmap2;RS=rs129876943;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	199384388	199384487	.	+	.	Name=Days_to_silk;B73v2_pos=4:193224319;1allele=T/C;version=Hapmap2;RS=rs835944932;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	199385795	199385894	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:193225726;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	199450729	199450828	.	+	.	Name=Days_to_silk;B73v2_pos=4:193288263;1allele=A/G;version=Hapmap2;RS=rs1064725324;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	199577844	199577943	.	+	.	Name=Ear_row_number;B73v2_pos=4:193414842;1allele=A/T;version=Hapmap2;RS=rs814600224;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	199697132	199697231	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:193531525;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	199827776	199827875	.	+	.	Name=Leaf_length;B73v2_pos=4:193559409;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	199896210	199896309	.	+	.	Name=Total_amino_acids;B73v2_pos=10:144010040;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	199967135	199967234	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:193802733;1allele=T/A;version=Hapmap2;RS=rs813214488;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	200024967	200025066	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:193884495;1allele=C/T;version=Hapmap2;RS=rs808321027;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	200794981	200795080	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:194676966;1allele=C/T;version=Hapmap2;RS=rs1063937557;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	200825880	200825979	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:194707866;1allele=C/T;version=Hapmap2;RS=rs840013156;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	200892401	200892500	.	+	.	Name=Cob_diameter;B73v2_pos=4:194772921;1allele=G/A;version=Hapmap2;RS=rs820787981;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	200958540	200958639	.	+	.	Name=Cob_diameter;B73v2_pos=4:194838660;1allele=C/G;version=Hapmap2;RS=rs129879212;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	201047257	201047356	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:194928081;1allele=T/G;version=Hapmap2;RS=rs277580993;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	201095735	201095834	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:194983334;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	201196687	201196786	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:195067103;1allele=A/G;version=Hapmap2;RS=rs277581307;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	201327244	201327343	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:195196190;1allele=C/T;version=Hapmap1;RS=rs132181329;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	201328083	201328182	.	+	.	Name=Cob_diameter;B73v2_pos=4:195197029;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	201340542	201340641	.	+	.	Name=Leaf_length;B73v2_pos=4:195209492;1allele=A/G;version=Hapmap1;RS=rs132181376;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	201506592	201506691	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:195373771;1allele=C/T;version=Hapmap2;RS=rs819724813;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	201681590	201681689	.	+	.	Name=Cob_diameter;B73v2_pos=4:195561266;1allele=C/T;version=Hapmap2;RS=rs1060887731;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	201896221	201896320	.	+	.	Name=Leaf_width;B73v2_pos=4:195793874;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	201932145	201932244	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:195829790;1allele=C/A;version=Hapmap2;RS=rs725936593;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	202015437	202015536	.	+	.	Name=Cob_diameter;B73v2_pos=4:195907044;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	202018706	202018805	.	+	.	Name=Cob_diameter;B73v2_pos=4:195903773;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	202053157	202053256	.	+	.	Name=Cob_diameter;B73v2_pos=4:195953243;1allele=G/A;version=Hapmap2;RS=rs277582948;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	202088079	202088178	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:195975639;1allele=T/A;version=Hapmap2;RS=rs277583016;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	202111674	202111773	.	+	.	Name=Days_to_silk;B73v2_pos=4:195999240;1allele=C/T;version=Hapmap2;RS=rs277583081;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	202114043	202114142	.	+	.	Name=Ear_row_number;B73v2_pos=4:196001609;1allele=G/C;version=Hapmap2;RS=rs816194842;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	202143393	202143492	.	+	.	Name=Ear_row_number;B73v2_pos=4:196030959;1allele=C/T;version=Hapmap2;RS=rs844062533;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	202170947	202171046	.	+	.	Name=Days_to_silk;B73v2_pos=4:196058530;1allele=G/C;version=Hapmap2;RS=rs1062816839;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	202187581	202187680	.	+	.	Name=Days_to_silk;B73v2_pos=4:196075164;1allele=A/G;version=Hapmap2;RS=rs724627127;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	202277540	202277639	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:196163767;1allele=C/T;version=Hapmap2;RS=rs813325801;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	202395478	202395577	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:196252576;1allele=A/C;version=Hapmap2;RS=rs841482129;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	202405990	202406089	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:196263227;1allele=T/C;version=Hapmap2;RS=rs830725434;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	202433410	202433509	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:196319568;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	202566851	202566950	.	+	.	Name=Cob_diameter;B73v2_pos=4:196453363;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	202619610	202619709	.	+	.	Name=Leaf_width;B73v2_pos=4:196506124;1allele=A/G;version=Hapmap2;RS=rs822634396;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	202677543	202677642	.	+	.	Name=Cob_diameter;B73v2_pos=4:196564132;1allele=G/A;version=Hapmap2;RS=rs1063800031;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	202733003	202733102	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:196588864;1allele=T/C;version=Hapmap1;RS=rs129883951;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	202965551	202965650	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:196812493;1allele=G/A;version=Hapmap2;RS=rs132182411;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	202965806	202965905	.	+	.	Name=Cob_diameter;B73v2_pos=4:196812748;1allele=C/T;version=Hapmap2;RS=rs132182414;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	202977400	202977499	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:196824342;1allele=/TGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	202987637	202987736	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:196834580;1allele=A/C;version=Hapmap2;RS=rs813558328;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	202994402	202994501	.	+	.	Name=Cob_diameter;B73v2_pos=4:196841346;1allele=G/C;version=Hapmap2;RS=rs847889253;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	203021071	203021170	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:196934245;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	203030457	203030556	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:196925388;1allele=T/C;version=Hapmap2;RS=rs818470089;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	203052926	203053025	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:196902916;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	203208957	203209056	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:197037678;1allele=G/A;version=Hapmap2;RS=rs815677676;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	203213418	203213517	.	+	.	Name=Leaf_width;B73v2_pos=4:197042139;1allele=C/T;version=Hapmap2;RS=rs809801686;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	203253587	203253686	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:197082980;1allele=G/T;version=Hapmap1;RS=rs129884624;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	203324682	203324781	.	+	.	Name=Height_above_ear;B73v2_pos=4:197155520;1allele=G/A;version=Hapmap2;RS=rs277586601;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	203510441	203510540	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:197389689;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	203538989	203539088	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:197418237;1allele=G/T;version=Hapmap2;RS=rs802669250;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	203539037	203539136	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:197418285;1allele=A/G;version=Hapmap2;RS=rs726058137;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	203541877	203541976	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:197421125;1allele=A/C;version=Hapmap2;RS=rs277586876;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	203553413	203553512	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:197457766;1allele=G/T;version=Hapmap2;RS=rs806294638;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	203603894	203603993	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:197505877;1allele=A/G;version=Hapmap2;RS=rs277586904;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	203673371	203673470	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:197574180;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	203776646	203776745	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:197687612;1allele=G/A;version=Hapmap2;RS=rs277587254;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	204413535	204413634	.	+	.	Name=Ear_row_number;B73v2_pos=4:198309570;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	204453813	204453912	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:198349587;1allele=C/T;version=Hapmap2;RS=rs1061049505;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	204650493	204650592	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:198539165;1allele=G/C;version=Hapmap2;RS=rs277588631;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	204676292	204676391	.	+	.	Name=Ear_row_number;B73v2_pos=4:198565063;1allele=C/T;version=Hapmap2;RS=rs840469203;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	204678125	204678224	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:198566896;1allele=C/A;version=Hapmap2;RS=rs129887460;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	204883849	204883945	.	+	.	Name=Ear_row_number;B73v2_pos=4:198761998;1allele=A/G;version=Hapmap2;RS=rs818367634;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	204891064	204891163	.	+	.	Name=Ear_row_number;B73v2_pos=4:198768933;1allele=T/C;version=Hapmap2;RS=rs838720540;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	204895256	204895357	.	+	.	Name=Ear_row_number;B73v2_pos=4:198773126;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	204905693	204905792	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:198783561;1allele=T/C;version=Hapmap2;RS=rs277588923;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	204950863	204950962	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:198828475;1allele=A/G;version=Hapmap2;RS=rs277589146;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	204951110	204951209	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:198828722;1allele=A/C;version=Hapmap2;RS=rs277589153;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	204955162	204955261	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:198832774;1allele=G/A;version=Hapmap2;RS=rs277589208;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	204955162	204955261	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:198832774;1allele=G/A;version=Hapmap2;RS=rs277589208;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	204997923	204998022	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:198857207;1allele=G/A;version=Hapmap2;RS=rs809022081;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	205041293	205041392	.	+	.	Name=Height_above_ear;B73v2_pos=4:198920251;1allele=T/C;version=Hapmap2;RS=rs277589352;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	205117488	205117587	.	+	.	Name=Ear_row_number;B73v2_pos=4:198986557;1allele=A/G;version=Hapmap2;RS=rs809406971;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	205118427	205118526	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:198987496;1allele=G/C;version=Hapmap2;RS=rs277589538;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	205119265	205119364	.	+	.	Name=Plant_height;B73v2_pos=4:198988334;1allele=A/G;version=Hapmap2;RS=rs277589556;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	205129431	205129530	.	+	.	Name=Plant_height;B73v2_pos=4:198998500;1allele=C/T;version=Hapmap2;RS=rs129888090;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	205158824	205158923	.	+	.	Name=Ear_row_number;B73v2_pos=4:199028032;1allele=T/G;version=Hapmap2;RS=rs129888144;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	205161822	205161921	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:199031030;1allele=T/C;version=Hapmap2;RS=rs1063928925;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	205233190	205233289	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:199102061;1allele=C/T;version=Hapmap2;RS=rs277589695;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	205248669	205248768	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:199117699;1allele=G/A;version=Hapmap2;RS=rs1061004568;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	205263508	205263607	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:199132555;1allele=G/A;version=Hapmap2;RS=rs129888391;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	205348307	205348406	.	+	.	Name=Ear_row_number;B73v2_pos=4:199217501;1allele=G/A;version=Hapmap2;RS=rs132184509;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	205420981	205421080	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:199285631;1allele=G/A;version=Hapmap2;RS=rs129888650;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	205428836	205428935	.	+	.	Name=Height_above_ear;B73v2_pos=4:199293486;1allele=G/A;version=Hapmap2;RS=rs129888724;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	205541057	205541156	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:199398875;1allele=G/T;version=Hapmap2;RS=rs806094882;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	205544768	205544867	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:199402588;1allele=A/G;version=Hapmap2;RS=rs129888825;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	205560384	205560483	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:199418213;1allele=C/T;version=Hapmap2;RS=rs277590582;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	205561093	205561192	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:199418922;1allele=T/C;version=Hapmap2;RS=rs129888802;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	205644287	205644386	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:199530138;1allele=A/C;version=Hapmap2;RS=rs277590729;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	205649039	205649138	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:199534890;1allele=A/G;version=Hapmap2;RS=rs277590793;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	205849519	205849618	.	+	.	Name=Ear_row_number;B73v2_pos=4:199728809;1allele=A/T;version=Hapmap2;RS=rs846001818;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	205875481	205875580	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:199786567;1allele=T/G;version=Hapmap2;RS=rs277591596;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	205880460	205880559	.	+	.	Name=Ear_row_number;B73v2_pos=4:199813396;1allele=G/T;version=Hapmap2;RS=rs1061554086;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	205880690	205880789	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:199813626;1allele=C/T;version=Hapmap2;RS=rs1061834748;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	205897017	205897116	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:199829955;1allele=G/A;version=Hapmap2;RS=rs1063652588;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	205902994	205903093	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199835932;1allele=C/T;version=Hapmap2;RS=rs277591809;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	205905407	205905506	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199838346;1allele=T/A;version=Hapmap2;RS=rs277591857;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	205906092	205906191	.	+	.	Name=Height_above_ear;B73v2_pos=4:199839031;1allele=C/T;version=Hapmap2;RS=rs815956380;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	205906124	205906223	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:199839063;1allele=G/A;version=Hapmap2;RS=rs850170248;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	205907266	205907365	.	+	.	Name=Ear_row_number;B73v2_pos=4:199840205;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	205911205	205911304	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:199844144;1allele=T/C;version=Hapmap2;RS=rs129889301;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	205933007	205933106	.	+	.	Name=Ear_row_number;B73v2_pos=4:199865950;1allele=C/T;version=Hapmap2;RS=rs835556984;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	205986531	205986630	.	+	.	Name=Ear_row_number;B73v2_pos=4:199911873;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206006954	206007053	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199796398;1allele=A/G;version=Hapmap2;RS=rs277591641;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206007683	206007782	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199797127;1allele=A/G;version=Hapmap2;RS=rs1061319600;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	206007735	206007834	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199797179;1allele=A/G;version=Hapmap2;RS=rs831312534;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	206007770	206007869	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199797214;1allele=C/T;version=Hapmap2;RS=rs815487999;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206011371	206011470	.	+	.	Name=Ear_row_number;B73v2_pos=4:199800815;1allele=C/T;version=Hapmap2;RS=rs277591664;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206039717	206039816	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199934244;1allele=C/T;version=Hapmap2;RS=rs277592123;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	206040070	206040169	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:199934597;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206040139	206040238	.	+	.	Name=Ear_row_number;B73v2_pos=4:199934666;1allele=A/G;version=Hapmap2;RS=rs825827484;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206040151	206040250	.	+	.	Name=Ear_row_number;B73v2_pos=4:199934678;1allele=C/T;version=Hapmap2;RS=rs849548274;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	206043389	206043488	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:199937916;1allele=A/C;version=Hapmap2;RS=rs277592156;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	206045786	206045885	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:199940313;1allele=G/A;version=Hapmap2;RS=rs848960788;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206045843	206045942	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:199940370;1allele=T/C;version=Hapmap2;RS=rs834074132;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	206047210	206047309	.	+	.	Name=Ear_row_number;B73v2_pos=4:199941737;1allele=G/A;version=Hapmap2;RS=rs846452969;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	206048001	206048100	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:199942528;1allele=G/A;version=Hapmap2;RS=rs132184961;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	206052790	206052889	.	+	.	Name=Ear_row_number;B73v2_pos=4:199947317;1allele=G/A;version=Hapmap2;RS=rs129889443;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206150438	206150537	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:200004140;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206150442	206150541	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:200004136;1allele=C/T;version=Hapmap1;RS=rs840948215;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206216982	206217081	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:200109765;1allele=G/A;version=Hapmap2;RS=rs812833584;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206281135	206281234	.	+	.	Name=Ear_row_number;B73v2_pos=4:200192316;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206281572	206281671	.	+	.	Name=Ear_row_number;B73v2_pos=4:200191879;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206284611	206284710	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:200188840;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206293308	206293407	.	+	.	Name=Ear_row_number;B73v2_pos=4:200180134;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206300823	206300922	.	+	.	Name=Ear_row_number;B73v2_pos=4:200172619;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206307695	206307794	.	+	.	Name=Ear_row_number;B73v2_pos=4:200198790;1allele=A/G;version=Hapmap2;RS=rs819807485;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	206307750	206307849	.	+	.	Name=Ear_row_number;B73v2_pos=4:200198845;1allele=G/A;version=Hapmap2;RS=rs830024529;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206308924	206309023	.	+	.	Name=Ear_row_number;B73v2_pos=4:200200019;1allele=G/C;version=Hapmap2;RS=rs847299260;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	206312716	206312815	.	+	.	Name=Ear_row_number;B73v2_pos=4:200203812;1allele=C/T;version=Hapmap2;RS=rs725920092;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206330982	206331081	.	+	.	Name=Ear_row_number;B73v2_pos=4:200222078;1allele=C/T;version=Hapmap2;RS=rs1062670694;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	206427660	206427759	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:200244962;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206428740	206428839	.	+	.	Name=Ear_row_number;B73v2_pos=4:200246042;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206435389	206435488	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:200252691;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206439461	206439560	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:200256763;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206439461	206439560	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:200256763;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206441770	206441869	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:200259072;1allele=C/T;version=Hapmap2;RS=rs823788119;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206443787	206443886	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:200261089;1allele=A/G;version=Hapmap2;RS=rs277593139;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206471103	206471202	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:200288405;1allele=C/T;version=Hapmap2;RS=rs1061607454;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206474270	206474369	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:200291572;1allele=G/A;version=Hapmap2;RS=rs1061244709;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	206497200	206497299	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:200314502;1allele=T/C;version=Hapmap2;RS=rs725074351;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206506816	206506915	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:200324118;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206544630	206544729	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:200363167;1allele=T/C;version=Hapmap2;RS=rs129890778;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206733089	206733187	.	+	.	Name=Plant_height;B73v2_pos=4:200548699;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	206733610	206733709	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:200549222;1allele=C/T;version=Hapmap2;RS=rs277593736;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	206775800	206775899	.	+	.	Name=Ear_row_number;B73v2_pos=4:200622375;1allele=C/A;version=Hapmap2;RS=rs129891046;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	206825048	206825147	.	+	.	Name=Leaf_length;B73v2_pos=4:200646161;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	207003388	207003487	.	+	.	Name=Height_above_ear;B73v2_pos=4:200825164;1allele=C/A;version=Hapmap2;RS=rs132185788;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	207006926	207007025	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:200828702;1allele=-/+;version=Hapmap2;RS=rs824333589;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	207053793	207053892	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:200876726;1allele=G/A;version=Hapmap1;RS=rs132185909;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	207058496	207058595	.	+	.	Name=Height_above_ear;B73v2_pos=4:200879917;1allele=T/A;version=Hapmap2;RS=rs834848393;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	207117335	207117434	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:200938758;1allele=C/T;version=Hapmap2;RS=rs822250266;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	207281064	207281163	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201111161;1allele=G/A;version=Hapmap2;RS=rs132186000;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	207287276	207287375	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201117362;1allele=A/G;version=Hapmap2;RS=rs829475784;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	207288485	207288584	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201118571;1allele=G/A;version=Hapmap2;RS=rs806088412;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	207289587	207289686	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201119673;1allele=G/A;version=Hapmap2;RS=rs803575621;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	207289987	207290086	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:201120073;1allele=A/G;version=Hapmap2;RS=rs848343043;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	207416553	207416652	.	+	.	Name=Leaf_length;B73v2_pos=4:201314015;1allele=C/T;version=Hapmap2;RS=rs823035804;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	207492602	207492701	.	+	.	Name=Leaf_length;B73v2_pos=4:201261170;1allele=G/A;version=Hapmap2;RS=rs813090883;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	207516051	207516150	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201350742;1allele=C/G;version=Hapmap2;RS=rs832960058;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	207519387	207519486	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201360119;1allele=C/T;version=Hapmap2;RS=rs277594911;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	207524715	207524814	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201365447;1allele=G/A;version=Hapmap1;RS=rs129892535;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	207588141	207588240	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201453265;1allele=G/A;version=Hapmap2;RS=rs277594979;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	207600371	207600470	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201465496;1allele=A/C;version=Hapmap2;RS=rs277595108;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	207784586	207784685	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:201651969;1allele=C/T;version=Hapmap2;RS=rs822392517;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	207890583	207890682	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201749684;1allele=G/T;version=Hapmap2;RS=rs842454181;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	208004377	208004476	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:201867990;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	208009917	208010016	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:201862450;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	208012268	208012367	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201860099;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	208013504	208013603	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201858863;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	208015509	208015608	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:201856858;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	208017271	208017370	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:201855096;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	208038233	208038332	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:201886278;1allele=C/T;version=Hapmap1;RS=rs815265930;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	208060752	208060851	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:201909036;1allele=C/T;version=Hapmap2;RS=rs847327491;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	208090790	208090889	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201941839;1allele=G/A;version=Hapmap2;RS=rs818136840;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	208106239	208106338	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201957506;1allele=G/A;version=Hapmap1;RS=rs840744402;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	208106329	208106428	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201957596;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	208108521	208108620	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201959788;1allele=G/A;version=Hapmap2;RS=rs129893476;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	208109083	208109182	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:201960350;1allele=A/G;version=Hapmap2;RS=rs1063335539;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	208109780	208109879	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:201961047;1allele=G/A;version=Hapmap2;RS=rs845566053;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	208279655	208279754	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:202191003;1allele=A/G;version=Hapmap2;RS=rs129893856;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	208279655	208279754	.	+	.	Name=Height_above_ear;B73v2_pos=4:202191003;1allele=A/G;version=Hapmap2;RS=rs129893856;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	208293872	208293971	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:202205358;1allele=G/C;version=Hapmap2;RS=rs825131986;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	208298100	208298199	.	+	.	Name=Plant_height;B73v2_pos=4:202209586;1allele=C/T;version=Hapmap2;RS=rs1060905627;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	208304477	208304576	.	+	.	Name=Plant_height;B73v2_pos=4:202213596;1allele=G/A;version=Hapmap2;RS=rs1061135662;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	208309995	208310094	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:202219076;1allele=T/C;version=Hapmap2;RS=rs831182172;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	208312272	208312371	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:202221353;1allele=G/A;version=Hapmap2;RS=rs277596300;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	208371004	208371103	.	+	.	Name=Plant_height;B73v2_pos=4:202278564;1allele=G/A;version=Hapmap2;RS=rs129894036;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	208371432	208371531	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:202278992;1allele=C/T;version=Hapmap2;RS=rs277596363;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	208444512	208444611	.	+	.	Name=Ear_row_number;B73v2_pos=4:202353050;1allele=C/T;version=Hapmap2;RS=rs847813226;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	208771597	208771696	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:202664486;1allele=C/T;version=Hapmap2;RS=rs277596822;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	209092459	209092558	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:202883758;1allele=T/G;version=Hapmap2;RS=rs806938830;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	209096670	209096769	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:202887969;1allele=C/T;version=Hapmap1;RS=rs132187349;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	209208939	209209038	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:203029419;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	209250087	209250186	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:203018379;1allele=A/G;version=Hapmap2;RS=rs129894801;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	209250501	209250600	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:203018793;1allele=T/G;version=Hapmap2;RS=rs832493411;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	209275402	209275501	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:203062653;1allele=G/C;version=Hapmap2;RS=rs831822929;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	209309866	209309965	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:203097455;1allele=G/T;version=Hapmap2;RS=rs726627165;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	209309867	209309966	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:203097456;1allele=C/T;version=Hapmap2;RS=rs724427000;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	209401219	209401318	.	+	.	Name=Leaf_length;B73v2_pos=4:203181919;1allele=T/C;version=Hapmap2;RS=rs837565324;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	209455506	209455605	.	+	.	Name=Tassel_length;B73v2_pos=4:203237153;1allele=C/T;version=Hapmap2;RS=rs810588064;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	209456850	209456949	.	+	.	Name=Tassel_length;B73v2_pos=4:203238497;1allele=A/T;version=Hapmap2;RS=rs277597323;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	209458196	209458295	.	+	.	Name=Tassel_length;B73v2_pos=4:203239843;1allele=T/C;version=Hapmap2;RS=rs805892459;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	209459467	209459566	.	+	.	Name=Tassel_length;B73v2_pos=4:203241114;1allele=G/T;version=Hapmap2;RS=rs129895348;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	209460523	209460622	.	+	.	Name=Tassel_length;B73v2_pos=4:203242170;1allele=G/A;version=Hapmap2;RS=rs823272703;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	209539858	209539957	.	+	.	Name=Tassel_length;B73v2_pos=4:203321515;1allele=A/G;version=Hapmap2;RS=rs803810866;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	209554970	209555069	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:203372702;1allele=A/G;version=Hapmap2;RS=rs1061310603;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	209556222	209556321	.	+	.	Name=Tassel_length;B73v2_pos=4:203373954;1allele=G/A;version=Hapmap2;RS=rs801641425;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	209573467	209573566	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:203346767;1allele=C/T;version=Hapmap2;RS=rs814321588;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	210082314	210082413	.	+	.	Name=Ear_row_number;B73v2_pos=4:203836523;1allele=G/T;version=Hapmap2;RS=rs828960424;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	210084373	210084472	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:203838582;1allele=C/T;version=Hapmap2;RS=rs822208134;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	210089220	210089319	.	+	.	Name=Ear_row_number;B73v2_pos=4:203843429;1allele=G/A;version=Hapmap2;RS=rs724271782;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	210098486	210098585	.	+	.	Name=Leaf_length;B73v2_pos=4:203852695;1allele=G/A;version=Hapmap2;RS=rs819383397;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	210099175	210099274	.	+	.	Name=Leaf_length;B73v2_pos=4:203853384;1allele=T/C;version=Hapmap2;RS=rs129896374;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	210107943	210108043	.	+	.	Name=Leaf_length;B73v2_pos=4:203861702;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	210108068	210108167	.	+	.	Name=Leaf_length;B73v2_pos=4:203861826;1allele=T/A;version=Hapmap2;RS=rs807493700;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	210111451	210111550	.	+	.	Name=Leaf_length;B73v2_pos=4:203865209;1allele=G/T;version=Hapmap2;RS=rs804808900;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	210113565	210113664	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:203867323;1allele=G/A;version=Hapmap2;RS=rs839178289;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	210210672	210210771	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:203980450;1allele=T/C;version=Hapmap2;RS=rs818840526;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	210215022	210215121	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:203984801;1allele=T/C;version=Hapmap2;RS=rs725657039;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	210260766	210260865	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:204005426;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	210349043	210349142	.	+	.	Name=Nodes_to_ear;B73v2_pos=4:204073566;1allele=A/G;version=Hapmap2;RS=rs277598015;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	210349263	210349361	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:204073786;1allele=G/A;version=Hapmap2;RS=rs811308163;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	210398110	210398209	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:204125345;1allele=C/T;version=Hapmap2;RS=rs132187977;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	210406796	210406895	.	+	.	Name=Plant_height;B73v2_pos=4:204134032;1allele=A/G;version=Hapmap2;RS=rs844248023;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	210482006	210482105	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:204209594;1allele=G/T;version=Hapmap2;RS=rs129896949;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	210542280	210542379	.	+	.	Name=Tassel_length;B73v2_pos=4:204269816;1allele=CCG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	210565809	210565908	.	+	.	Name=Tassel_length;B73v2_pos=4:204293346;1allele=G/A;version=Hapmap2;RS=rs848681954;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	210590411	210590510	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:204318554;1allele=G/A;version=Hapmap2;RS=rs844613668;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	210599749	210599848	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:204327892;1allele=C/T;version=Hapmap2;RS=rs830566416;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	210602677	210602776	.	+	.	Name=Tassel_length;B73v2_pos=4:204330820;1allele=C/A;version=Hapmap2;RS=rs277598873;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	210645360	210645459	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:204373505;1allele=A/T;version=Hapmap2;RS=rs802568584;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	210761425	210761524	.	+	.	Name=Height_above_ear;B73v2_pos=4:204484051;1allele=C/T;version=Hapmap2;RS=rs277599404;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	210960110	210960209	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:204681834;1allele=A/G;version=Hapmap2;RS=rs277599873;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	211047418	211047517	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:204754974;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	211048308	211048407	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:204754084;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	211112229	211112328	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:204836691;1allele=A/G;version=Hapmap2;RS=rs838725119;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	211389404	211389503	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:205120270;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	211390020	211390118	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:205119654;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	212261716	212261815	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:205964923;1allele=G/C;version=Hapmap2;RS=rs849803381;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	212321511	212321610	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:206024791;1allele=G/T;version=Hapmap2;RS=rs841048528;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	212418762	212418861	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:206119706;1allele=T/C;version=Hapmap2;RS=rs850352772;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	212435644	212435743	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:206135323;1allele=T/A;version=Hapmap2;RS=rs1063715886;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	212438165	212438264	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:206137843;1allele=T/C;version=Hapmap2;RS=rs801816937;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	212441098	212441197	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:206140776;1allele=C/T;version=Hapmap2;RS=rs805187018;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	212443919	212444018	.	+	.	Name=Plant_height;B73v2_pos=4:206143597;1allele=G/A;version=Hapmap2;RS=rs1061141287;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	212466061	212466160	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:206166492;1allele=A/T;version=Hapmap2;RS=rs1062937509;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	212736193	212736292	.	+	.	Name=Plant_height;B73v2_pos=4:206428683;1allele=A/G;version=Hapmap1;RS=rs816431077;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	212754250	212754349	.	+	.	Name=Plant_height;B73v2_pos=4:206446740;1allele=G/A;version=Hapmap2;RS=rs805902063;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	212900017	212900116	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:206586356;1allele=C/T;version=Hapmap2;RS=rs825318844;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	212905812	212905911	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:206592153;1allele=G/A;version=Hapmap2;RS=rs832826081;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	213168377	213168476	.	+	.	Name=Height_above_ear;B73v2_pos=4:206846182;1allele=G/A;version=Hapmap2;RS=rs1061879609;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	213315784	213315883	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:206990848;1allele=A/G;version=Hapmap2;RS=rs828794826;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	213348989	213349088	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:207024058;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	213390559	213390658	.	+	.	Name=Ear_row_number;B73v2_pos=4:207064635;1allele=G/T;version=Hapmap2;RS=rs803360896;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	213420418	213420517	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:207095220;1allele=C/A;version=Hapmap2;RS=rs726264314;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	213437906	213438005	.	+	.	Name=Ear_row_number;B73v2_pos=4:207112708;1allele=C/T;version=Hapmap2;RS=rs277602802;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	213475146	213475245	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:207142922;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	213497869	213497968	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:207173251;1allele=C/A;version=Hapmap2;RS=rs807524443;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	213653372	213653470	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:207322598;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	213751119	213751218	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:207419067;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	213892290	213892389	.	+	.	Name=Leaf_length;B73v2_pos=4:207669118;1allele=G/A;version=Hapmap2;RS=rs844268338;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	214044196	214044295	.	+	.	Name=Ear_row_number;B73v2_pos=4:207700574;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	214129169	214129268	.	+	.	Name=Days_to_silk;B73v2_pos=4:207785575;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	214216372	214216471	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:207870671;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	214291906	214292005	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:207946995;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	214320424	214320523	.	+	.	Name=Plant_height;B73v2_pos=4:207975515;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	214631889	214631988	.	+	.	Name=Plant_height;B73v2_pos=4:208272041;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	214789840	214789939	.	+	.	Name=Plant_height;B73v2_pos=4:208493571;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	214862437	214862536	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:208458027;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	215279351	215279450	.	+	.	Name=Plant_height;B73v2_pos=4:208930710;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	215364011	215364110	.	+	.	Name=Plant_height;B73v2_pos=4:208996828;1allele=G/T;version=Hapmap2;RS=rs1061832370;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	215364011	215364110	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:208996828;1allele=G/T;version=Hapmap2;RS=rs1061832370;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	215599448	215599547	.	+	.	Name=Ear_height;B73v2_pos=4:209226590;1allele=T/C;version=Hapmap2;RS=rs724519693;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	215645883	215645982	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:209272201;1allele=G/A;version=Hapmap2;RS=rs129903797;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	215684919	215685018	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:209311314;1allele=G/A;version=Hapmap2;RS=rs848635007;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	215826610	215826709	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:209450954;1allele=C/A;version=Hapmap1;RS=rs132190542;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	215903680	215903779	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:209509464;1allele=A/G;version=Hapmap2;RS=rs277605175;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	215999790	215999889	.	+	.	Name=Leaf_length;B73v2_pos=4:209613244;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	216027227	216027326	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:209669460;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	216240930	216241029	.	+	.	Name=Leaf_length;B73v2_pos=4:209846280;1allele=G/C;version=Hapmap2;RS=rs832080401;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	216321148	216321247	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:209926502;1allele=C/A;version=Hapmap2;RS=rs1063644291;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	216321148	216321247	.	+	.	Name=Height_above_ear;B73v2_pos=4:209926502;1allele=C/A;version=Hapmap2;RS=rs1063644291;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	216322132	216322231	.	+	.	Name=Tassel_length;B73v2_pos=4:209927486;1allele=T/C;version=Hapmap2;RS=rs836114725;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	216337836	216337935	.	+	.	Name=Tassel_length;B73v2_pos=4:209943191;1allele=A/G;version=Hapmap2;RS=rs129905986;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	216361353	216361452	.	+	.	Name=Height_above_ear;B73v2_pos=4:209960011;1allele=C/T;version=Hapmap2;RS=rs129906132;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	216392641	216392740	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:210046714;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	216392641	216392740	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:210046714;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	216497356	216497455	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:210104543;1allele=C/T;version=Hapmap2;RS=rs277606510;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	216497356	216497455	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:210104543;1allele=C/T;version=Hapmap2;RS=rs277606510;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	216502090	216502189	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:210109277;1allele=C/T;version=Hapmap2;RS=rs825379922;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	216515390	216515489	.	+	.	Name=Ear_row_number;B73v2_pos=4:210122576;1allele=C/T;version=Hapmap2;RS=rs129906599;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	216525139	216525238	.	+	.	Name=Plant_height;B73v2_pos=4:210132945;1allele=A/G;version=Hapmap2;RS=rs277606750;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	216525139	216525238	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:210132945;1allele=A/G;version=Hapmap2;RS=rs277606750;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	216525173	216525272	.	+	.	Name=Height_above_ear;B73v2_pos=4:210132979;1allele=G/C;version=Hapmap2;RS=rs277606751;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	216525173	216525272	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:210132979;1allele=G/C;version=Hapmap2;RS=rs277606751;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	216525173	216525272	.	+	.	Name=Plant_height;B73v2_pos=4:210132979;1allele=G/C;version=Hapmap2;RS=rs277606751;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	216525274	216525373	.	+	.	Name=Plant_height;B73v2_pos=4:210133080;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	216526029	216526128	.	+	.	Name=Height_above_ear;B73v2_pos=4:210133835;1allele=A/G;version=Hapmap2;RS=rs837999987;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	216528747	216528846	.	+	.	Name=Height_above_ear;B73v2_pos=4:210136553;1allele=G/A;version=Hapmap2;RS=rs277606775;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	216528747	216528846	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:210136553;1allele=G/A;version=Hapmap2;RS=rs277606775;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	216528748	216528847	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:210136554;1allele=A/C;version=Hapmap2;RS=rs277606776;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	216657829	216657928	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:210265345;1allele=A/G;version=Hapmap2;RS=rs827418205;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	216658319	216658418	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:210265835;1allele=A/G;version=Hapmap2;RS=rs277607035;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	216693367	216693466	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:210301262;1allele=G/A;version=Hapmap2;RS=rs838631971;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	216719545	216719644	.	+	.	Name=Plant_height;B73v2_pos=4:210327448;1allele=G/T;version=Hapmap2;RS=rs129907263;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	216721134	216721233	.	+	.	Name=Leaf_width;B73v2_pos=4:210329037;1allele=G/T;version=Hapmap2;RS=rs129907273;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	216776310	216776409	.	+	.	Name=Leaf_width;B73v2_pos=4:210384213;1allele=T/C;version=Hapmap2;RS=rs129907426;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	216798567	216798666	.	+	.	Name=Ear_row_number;B73v2_pos=4:210406471;1allele=C/T;version=Hapmap2;RS=rs836444653;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	216864321	216864420	.	+	.	Name=Ear_row_number;B73v2_pos=4:210467501;1allele=T/A;version=Hapmap2;RS=rs816577532;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	216866933	216867032	.	+	.	Name=Plant_height;B73v2_pos=4:210470111;1allele=G/T;version=Hapmap2;RS=rs1061156424;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	216875779	216875878	.	+	.	Name=Ear_row_number;B73v2_pos=4:210480248;1allele=G/A;version=Hapmap2;RS=rs132191205;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	216876049	216876148	.	+	.	Name=Leaf_length;B73v2_pos=4:210480518;1allele=T/C;version=Hapmap2;RS=rs727064571;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	216895848	216895947	.	+	.	Name=Plant_height;B73v2_pos=4:210500319;1allele=A/T;version=Hapmap2;RS=rs277607440;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	216899498	216899597	.	+	.	Name=Ear_row_number;B73v2_pos=4:210503970;1allele=T/C;version=Hapmap2;RS=rs818723034;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	216899515	216899614	.	+	.	Name=Ear_row_number;B73v2_pos=4:210503987;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	216935693	216935792	.	+	.	Name=Ear_row_number;B73v2_pos=4:210541742;1allele=A/G;version=Hapmap2;RS=rs830272481;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	216954123	216954222	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:210560175;1allele=G/T;version=Hapmap2;RS=rs277607481;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	216958660	216958759	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:210564712;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	216971724	216971823	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:210577778;1allele=G/A;version=Hapmap2;RS=rs277607518;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	216973628	216973727	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:210579682;1allele=C/T;version=Hapmap2;RS=rs129907730;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	216985686	216985785	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:210591742;1allele=C/T;version=Hapmap2;RS=rs809398050;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	217013385	217013484	.	+	.	Name=Leaf_width;B73v2_pos=4:210619941;1allele=T/G;version=Hapmap2;RS=rs277607704;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	217078192	217078291	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:210684751;1allele=G/A;version=Hapmap2;RS=rs848138376;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	217079083	217079182	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:210685642;1allele=A/G;version=Hapmap2;RS=rs815195358;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	217246688	217246787	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:210838764;1allele=A/C;version=Hapmap2;RS=rs822378816;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	217273312	217273411	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:210865373;1allele=C/T;version=Hapmap1;RS=rs132191455;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	217280629	217280728	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:210872689;1allele=A/G;version=Hapmap2;RS=rs725490159;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	217280812	217280911	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:210872872;1allele=A/C;version=Hapmap2;RS=rs817746664;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	217343465	217343564	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:210939891;1allele=G/A;version=Hapmap2;RS=rs820455637;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	217577032	217577131	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:211162142;1allele=C/T;version=Hapmap2;RS=rs842953774;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	217721825	217721924	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:211301403;1allele=T/C;version=Hapmap2;RS=rs129909733;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	218349760	218349859	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211431327;1allele=A/G;version=Hapmap2;RS=rs833045158;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	218354420	218354519	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211535680;1allele=C/T;version=Hapmap2;RS=rs809661864;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	218354609	218354708	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211535869;1allele=G/A;version=Hapmap2;RS=rs807500125;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	218368035	218368134	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211447625;1allele=T/C;version=Hapmap2;RS=rs824973651;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	218368905	218369004	.	+	.	Name=Leaf_length;B73v2_pos=4:211448495;1allele=T/C;version=Hapmap2;RS=rs804285836;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	218393859	218393958	.	+	.	Name=Ear_row_number;B73v2_pos=4:211465264;1allele=G/A;version=Hapmap2;RS=rs805603791;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	218394301	218394400	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211465706;1allele=C/T;version=Hapmap2;RS=rs814345135;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	218395473	218395572	.	+	.	Name=Leaf_length;B73v2_pos=4:211466878;1allele=A/G;version=Hapmap2;RS=rs129910138;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	218459287	218459386	.	+	.	Name=Height_above_ear;B73v2_pos=4:211533111;1allele=C/T;version=Hapmap2;RS=rs129910396;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	218476477	218476576	.	+	.	Name=Leaf_width;B73v2_pos=4:211558251;1allele=T/C;version=Hapmap2;RS=rs812012384;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	218478341	218478440	.	+	.	Name=Leaf_width;B73v2_pos=4:211560115;1allele=C/G;version=Hapmap2;RS=rs823667304;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	218530471	218530570	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:211604466;1allele=A/C;version=Hapmap2;RS=rs830435919;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	218557387	218557486	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:211631390;1allele=A/C;version=Hapmap2;RS=rs804101492;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	218576645	218576744	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:211650650;1allele=C/T;version=Hapmap2;RS=rs132191979;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	218780661	218780760	.	+	.	Name=Tassel_length;B73v2_pos=4:211853645;1allele=T/G;version=Hapmap2;RS=rs848772844;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	218781008	218781107	.	+	.	Name=Tassel_length;B73v2_pos=4:211853992;1allele=C/A;version=Hapmap2;RS=rs810039131;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	218782960	218783059	.	+	.	Name=Tassel_length;B73v2_pos=4:211855944;1allele=C/T;version=Hapmap2;RS=rs833991816;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	218801791	218801890	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211874775;1allele=C/T;version=Hapmap2;RS=rs843684018;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	218801829	218801928	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211874813;1allele=T/G;version=Hapmap2;RS=rs834111626;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	218804129	218804228	.	+	.	Name=Ear_height;B73v2_pos=4:211877113;1allele=C/T;version=Hapmap2;RS=rs802413741;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	218805265	218805364	.	+	.	Name=Ear_height;B73v2_pos=4:211878249;1allele=C/T;version=Hapmap2;RS=rs814788341;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	218805448	218805547	.	+	.	Name=Leaf_width;B73v2_pos=4:211878432;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	218916122	218916221	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211989197;1allele=G/A;version=Hapmap2;RS=rs837739366;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	218923370	218923469	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:211996447;1allele=C/T;version=Hapmap2;RS=rs277610061;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	219093507	219093606	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:212164358;1allele=A/C;version=Hapmap2;RS=rs1063732479;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	219111656	219111755	.	+	.	Name=Leaf_length;B73v2_pos=4:212182508;1allele=A/G;version=Hapmap2;RS=rs803568274;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	219154342	219154441	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:212225195;1allele=G/A;version=Hapmap2;RS=rs820205437;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	219168913	219169012	.	+	.	Name=Leaf_length;B73v2_pos=4:212239767;1allele=G/A;version=Hapmap2;RS=rs811404011;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	219187042	219187141	.	+	.	Name=Leaf_length;B73v2_pos=4:212257895;1allele=A/G;version=Hapmap2;RS=rs129911868;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	219208733	219208832	.	+	.	Name=Ear_row_number;B73v2_pos=4:212279586;1allele=A/T;version=Hapmap2;RS=rs727095689;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	219211671	219211770	.	+	.	Name=Leaf_length;B73v2_pos=4:212282525;1allele=C/T;version=Hapmap2;RS=rs836531220;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	219250954	219251053	.	+	.	Name=Leaf_width;B73v2_pos=4:212322893;1allele=G/A;version=Hapmap1;RS=rs869457194;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	219255737	219255836	.	+	.	Name=Ear_row_number;B73v2_pos=4:212327676;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	219259110	219259209	.	+	.	Name=Plant_height;B73v2_pos=4:212331050;1allele=C/T;version=Hapmap2;RS=rs129911956;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	219441027	219441126	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:212503948;1allele=A/T;version=Hapmap2;RS=rs277611470;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	219486767	219486866	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:212548783;1allele=T/A;version=Hapmap2;RS=rs838445751;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	219489198	219489297	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:212551214;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	219489202	219489301	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:212551218;1allele=A/T;version=Hapmap2;RS=rs841780982;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	219744203	219744302	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:212805120;1allele=T/C;version=Hapmap2;RS=rs816794568;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	220025276	220025375	.	+	.	Name=Plant_height;B73v2_pos=4:213040099;1allele=A/G;version=Hapmap2;RS=rs129914148;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	220028047	220028146	.	+	.	Name=Plant_height;B73v2_pos=4:213042870;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	220111474	220111573	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:213127359;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	220111474	220111573	.	+	.	Name=Plant_height;B73v2_pos=4:213127359;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	220138361	220138460	.	+	.	Name=Height_above_ear;B73v2_pos=4:213154172;1allele=C/T;version=Hapmap2;RS=rs816735490;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	220194437	220194536	.	+	.	Name=Plant_height;B73v2_pos=4:213210250;1allele=A/G;version=Hapmap2;RS=rs277612934;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	220200187	220200286	.	+	.	Name=Ear_height;B73v2_pos=4:213216000;1allele=A/T;version=Hapmap2;RS=rs803090788;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	220200225	220200324	.	+	.	Name=Ear_height;B73v2_pos=4:213216038;1allele=A/G;version=Hapmap2;RS=rs849165949;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	220213787	220213886	.	+	.	Name=Height_above_ear;B73v2_pos=4:213229600;1allele=G/C;version=Hapmap1;RS=rs132192557;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	220213787	220213886	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:213229600;1allele=G/C;version=Hapmap1;RS=rs132192557;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	220250250	220250349	.	+	.	Name=Height_above_ear;B73v2_pos=4:213262582;1allele=G/A;version=Hapmap2;RS=rs1062010084;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	220274520	220274619	.	+	.	Name=Plant_height;B73v2_pos=4:213286854;1allele=A/G;version=Hapmap2;RS=rs277613193;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	220276185	220276284	.	+	.	Name=Height_above_ear;B73v2_pos=4:213288519;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	220276823	220276922	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:213289157;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	220312036	220312135	.	+	.	Name=Ear_height;B73v2_pos=4:213324372;1allele=A/T;version=Hapmap2;RS=rs849863638;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	220335623	220335722	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:213347959;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	220359814	220359913	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:213372560;1allele=C/G;version=Hapmap2;RS=rs129915499;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	220494183	220494282	.	+	.	Name=Height_above_ear;B73v2_pos=4:213505663;1allele=T/C;version=Hapmap2;RS=rs129915750;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	220721470	220721569	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:213733307;1allele=A/G;version=Hapmap2;RS=rs818992527;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	220738468	220738567	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:213756546;1allele=A/G;version=Hapmap2;RS=rs824882504;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	220739745	220739844	.	+	.	Name=Plant_height;B73v2_pos=4:213757823;1allele=C/T;version=Hapmap2;RS=rs277613807;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	220739745	220739844	.	+	.	Name=Height_above_ear;B73v2_pos=4:213757823;1allele=C/T;version=Hapmap2;RS=rs277613807;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	220760661	220760760	.	+	.	Name=Cob_diameter;B73v2_pos=4:213778484;1allele=C/G;version=Hapmap2;RS=rs129916099;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	221072805	221072904	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:214087639;1allele=C/T;version=Hapmap2;RS=rs132192941;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	221558649	221558748	.	+	.	Name=Ear_height;B73v2_pos=4:214568602;1allele=C/G;version=Hapmap2;RS=rs848782825;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	221638284	221638383	.	+	.	Name=Ear_height;B73v2_pos=4:214647409;1allele=T/G;version=Hapmap2;RS=rs727347251;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	221707354	221707453	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:214743144;1allele=A/C;version=Hapmap1;RS=rs132193212;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	221708060	221708159	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:214743850;1allele=T/C;version=Hapmap2;RS=rs840520558;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	221708060	221708159	.	+	.	Name=Plant_height;B73v2_pos=4:214743850;1allele=T/C;version=Hapmap2;RS=rs840520558;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	221770417	221770516	.	+	.	Name=Height_above_ear;B73v2_pos=4:214776791;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	221773151	221773250	.	+	.	Name=Height_above_ear;B73v2_pos=4:214779525;1allele=G/T;version=Hapmap2;RS=rs129916790;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	221790198	221790297	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:214796567;1allele=A/G;version=Hapmap2;RS=rs277615036;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	221796342	221796441	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:214802713;1allele=G/A;version=Hapmap2;RS=rs1061109224;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	221796583	221796682	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:214802954;1allele=G/T;version=Hapmap2;RS=rs129916844;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	221827585	221827684	.	+	.	Name=Plant_height;B73v2_pos=4:214833966;1allele=T/C;version=Hapmap2;RS=rs844282242;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	221881500	221881599	.	+	.	Name=Height_above_ear;B73v2_pos=4:214885333;1allele=T/C;version=Hapmap2;RS=rs129917061;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	222322709	222322808	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:215307276;1allele=G/A;version=Hapmap2;RS=rs277616123;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	222453347	222453446	.	+	.	Name=Starch;B73v2_pos=4:215437923;1allele=T/C;version=Hapmap2;RS=rs836783936;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	222457145	222457244	.	+	.	Name=Starch;B73v2_pos=4:215441721;1allele=A/C;version=Hapmap2;RS=rs277616658;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	222459663	222459762	.	+	.	Name=Ear_height;B73v2_pos=4:215444239;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	222462128	222462227	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:215446704;1allele=T/C;version=Hapmap2;RS=rs277616667;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	222462128	222462227	.	+	.	Name=Plant_height;B73v2_pos=4:215446704;1allele=T/C;version=Hapmap2;RS=rs277616667;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	222464051	222464150	.	+	.	Name=Plant_height;B73v2_pos=4:215448627;1allele=G/C;version=Hapmap1;RS=rs132193483;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	222665096	222665195	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:215649023;1allele=A/G;version=Hapmap2;RS=rs824790007;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	222712769	222712868	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:215715455;1allele=G/T;version=Hapmap2;RS=rs129919059;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	222729008	222729107	.	+	.	Name=Plant_height;B73v2_pos=4:215731690;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	222729008	222729107	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:215731690;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	222890480	222890579	.	+	.	Name=Ear_height;B73v2_pos=4:215892730;1allele=C/T;version=Hapmap1;RS=rs826157294;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	222994953	222995052	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:215995482;1allele=A/G;version=Hapmap2;RS=rs835080882;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223005600	223005699	.	+	.	Name=Days_to_silk;B73v2_pos=4:216006129;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	223007255	223007354	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:216007784;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	223008607	223008706	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:216009136;1allele=A/G;version=Hapmap2;RS=rs803512247;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223025926	223026025	.	+	.	Name=Plant_height;B73v2_pos=4:216026457;1allele=C/T;version=Hapmap2;RS=rs804451081;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	223026957	223027056	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:216027488;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	223028457	223028556	.	+	.	Name=Days_to_silk;B73v2_pos=4:216028988;1allele=A/T;version=Hapmap2;RS=rs129919675;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	223030561	223030660	.	+	.	Name=Plant_height;B73v2_pos=4:216031092;1allele=G/T;version=Hapmap2;RS=rs813438476;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	223031217	223031316	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:216031748;1allele=A/C;version=Hapmap2;RS=rs129919707;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	223033551	223033650	.	+	.	Name=Days_to_silk;B73v2_pos=4:216034083;1allele=C/T;version=Hapmap2;RS=rs836468978;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	223033609	223033708	.	+	.	Name=Days_to_silk;B73v2_pos=4:216034141;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	223145231	223145330	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:216147842;1allele=T/C;version=Hapmap2;RS=rs834175710;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	223151330	223151429	.	+	.	Name=Plant_height;B73v2_pos=4:216153941;1allele=C/G;version=Hapmap2;RS=rs1062648718;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	223168444	223168543	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:216171058;1allele=A/G;version=Hapmap2;RS=rs129920087;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223246269	223246368	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:216242174;1allele=C/T;version=Hapmap2;RS=rs831695642;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	223272939	223273038	.	+	.	Name=Plant_height;B73v2_pos=4:216267072;1allele=G/A;version=Hapmap2;RS=rs129920373;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223278449	223278548	.	+	.	Name=100_Kernel_weight;B73v2_pos=4:216272583;1allele=G/A;version=Hapmap2;RS=rs839949349;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	223280218	223280317	.	+	.	Name=Leaf_length;B73v2_pos=4:216274352;1allele=A/T;version=Hapmap2;RS=rs725919345;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	223281013	223281112	.	+	.	Name=Plant_height;B73v2_pos=4:216275147;1allele=A/G;version=Hapmap2;RS=rs277618162;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223281020	223281119	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:216275154;1allele=T/A;version=Hapmap2;RS=rs848062499;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	223330846	223330945	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:216322523;1allele=T/C;version=Hapmap2;RS=rs129920563;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	223456214	223456313	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:216441098;1allele=G/A;version=Hapmap2;RS=rs838601914;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	223462962	223463061	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:216447847;1allele=G/T;version=Hapmap2;RS=rs803009208;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	223529970	223530069	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:216515064;1allele=A/G;version=Hapmap2;RS=rs831232106;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223531985	223532084	.	+	.	Name=Plant_height;B73v2_pos=4:216517079;1allele=G/A;version=Hapmap2;RS=rs129921029;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223661092	223661191	.	+	.	Name=Plant_height;B73v2_pos=4:216638563;1allele=C/T;version=Hapmap2;RS=rs277618929;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	223661692	223661791	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:216639163;1allele=A/G;version=Hapmap2;RS=rs129921228;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223666315	223666414	.	+	.	Name=Plant_height;B73v2_pos=4:216643787;1allele=G/A;version=Hapmap2;RS=rs823272888;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	223666809	223666908	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:216644281;1allele=G/A;version=Hapmap2;RS=rs840054080;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	223669343	223669442	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:216646815;1allele=A/G;version=Hapmap2;RS=rs821469070;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223671545	223671644	.	+	.	Name=Tassel_length;B73v2_pos=4:216649018;1allele=G/A;version=Hapmap2;RS=rs129921312;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	223702194	223702293	.	+	.	Name=Tassel_length;B73v2_pos=4:216679832;1allele=G/A;version=Hapmap1;RS=rs132194085;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	223704696	223704795	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:216682333;1allele=C/T;version=Hapmap1;RS=rs132194093;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	223787843	223787942	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:216728604;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	223797117	223797216	.	+	.	Name=Tassel_length;B73v2_pos=4:216719330;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	223810099	223810198	.	+	.	Name=Tassel_length;B73v2_pos=4:216706348;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	223870960	223871059	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:216840551;1allele=T/C;version=Hapmap2;RS=rs815551066;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	223922366	223922465	.	+	.	Name=Leaf_length;B73v2_pos=4:216889288;1allele=C/T;version=Hapmap2;RS=rs821909009;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	224051229	224051328	.	+	.	Name=Plant_height;B73v2_pos=4:217026240;1allele=T/A;version=Hapmap2;RS=rs727463322;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	224064230	224064329	.	+	.	Name=Tassel_length;B73v2_pos=4:217039242;1allele=G/C;version=Hapmap2;RS=rs848041736;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	224085770	224085869	.	+	.	Name=Tassel_length;B73v2_pos=4:217060782;1allele=G/A;version=Hapmap2;RS=rs129922951;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224096690	224096789	.	+	.	Name=Tassel_length;B73v2_pos=4:217071702;1allele=C/T;version=Hapmap2;RS=rs277620188;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	224125816	224125915	.	+	.	Name=Ear_height;B73v2_pos=4:217100819;1allele=G/A;version=Hapmap2;RS=rs833167542;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224165926	224166025	.	+	.	Name=Leaf_width;B73v2_pos=4:217135432;1allele=T/C;version=Hapmap2;RS=rs1061355151;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	224415240	224415339	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:217373133;1allele=G/A;version=Hapmap2;RS=rs129923283;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224484300	224484399	.	+	.	Name=Cob_diameter;B73v2_pos=4:217439966;1allele=A/T;version=Hapmap2;RS=rs817978486;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	224504445	224504544	.	+	.	Name=Plant_height;B73v2_pos=4:217460111;1allele=G/A;version=Hapmap2;RS=rs727189155;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224577378	224577477	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:217532392;1allele=G/A;version=Hapmap2;RS=rs129923479;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224580743	224580842	.	+	.	Name=Plant_height;B73v2_pos=4:217535758;1allele=A/G;version=Hapmap2;RS=rs129923488;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224580743	224580842	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:217535758;1allele=A/G;version=Hapmap2;RS=rs129923488;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224656702	224656801	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:217608612;1allele=C/A;version=Hapmap2;RS=rs277621107;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	224667714	224667813	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:217619633;1allele=G/A;version=Hapmap2;RS=rs848645172;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224819205	224819304	.	+	.	Name=Tassel_length;B73v2_pos=4:217766881;1allele=G/A;version=Hapmap2;RS=rs835396125;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	224950990	224951089	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:217952375;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	224961832	224961931	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:217886924;1allele=G/A;version=Hapmap2;RS=rs841356952;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	225016499	225016598	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:217941734;1allele=C/T;version=Hapmap2;RS=rs277622478;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	225140717	225140816	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:218069741;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	225256488	225256587	.	+	.	Name=Cob_diameter;B73v2_pos=4:218184512;1allele=C/T;version=Hapmap2;RS=rs277622916;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	225539403	225539502	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:218453388;1allele=C/T;version=Hapmap2;RS=rs804842231;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	225667663	225667762	.	+	.	Name=Tassel_length;B73v2_pos=4:218571780;1allele=A/C;version=Hapmap2;RS=rs277623855;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	225698189	225698288	.	+	.	Name=Tassel_length;B73v2_pos=4:218602308;1allele=T/C;version=Hapmap2;RS=rs129925811;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	225747559	225747658	.	+	.	Name=Tassel_length;B73v2_pos=4:218649611;1allele=T/C;version=Hapmap2;RS=rs816597617;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	226196301	226196400	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:218999112;1allele=C/T;version=Hapmap2;RS=rs129926914;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	226449502	226449601	.	+	.	Name=Cob_diameter;B73v2_pos=4:219247691;1allele=C/T;version=Hapmap2;RS=rs842090773;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	226457720	226457819	.	+	.	Name=Leaf_width;B73v2_pos=4:219255911;1allele=C/T;version=Hapmap2;RS=rs817970667;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	226481866	226481965	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:219280063;1allele=G/A;version=Hapmap2;RS=rs805131960;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	226551260	226551359	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:219354591;1allele=C/T;version=Hapmap2;RS=rs831816208;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	226554943	226555042	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:219358274;1allele=C/T;version=Hapmap2;RS=rs807137532;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	226555800	226555899	.	+	.	Name=Plant_height;B73v2_pos=4:219359131;1allele=G/A;version=Hapmap2;RS=rs724698871;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	226648494	226648593	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:219434208;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	226732762	226732861	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:219535041;1allele=T/C;version=Hapmap2;RS=rs825145310;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	226806357	226806456	.	+	.	Name=Cob_diameter;B73v2_pos=4:219599517;1allele=A/G;version=Hapmap2;RS=rs277625640;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	227129474	227129573	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:219917121;1allele=G/A;version=Hapmap2;RS=rs129928922;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	227210884	227210983	.	+	.	Name=Tassel_length;B73v2_pos=4:219994707;1allele=A/G;version=Hapmap2;RS=rs129929299;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	227212274	227212373	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:219996097;1allele=A/C;version=Hapmap2;RS=rs840494054;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	227277985	227278084	.	+	.	Name=Ear_height;B73v2_pos=4:220094794;1allele=T/C;version=Hapmap2;RS=rs129929419;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	227456781	227456880	.	+	.	Name=Plant_height;B73v2_pos=4:220269708;1allele=T/G;version=Hapmap2;RS=rs825591555;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	227460607	227460706	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:220273537;1allele=G/A;version=Hapmap2;RS=rs277628003;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	227485459	227485558	.	+	.	Name=Ear_height;B73v2_pos=4:220301254;1allele=G/T;version=Hapmap2;RS=rs129930023;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	227811028	227811127	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:220623753;1allele=T/A;version=Hapmap2;RS=rs824389448;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	228171066	228171165	.	+	.	Name=Cob_diameter;B73v2_pos=4:220939732;1allele=C/T;version=Hapmap2;RS=rs727230734;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	228247783	228247882	.	+	.	Name=Plant_height;B73v2_pos=4:221008083;1allele=C/A;version=Hapmap2;RS=rs826989658;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	228293172	228293271	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:221053476;1allele=C/A;version=Hapmap2;RS=rs1061092905;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	228499100	228499199	.	+	.	Name=Plant_height;B73v2_pos=4:221258200;1allele=G/A;version=Hapmap2;RS=rs1064285119;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	228499100	228499199	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:221258200;1allele=G/A;version=Hapmap2;RS=rs1064285119;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	228499100	228499199	.	+	.	Name=Tassel_length;B73v2_pos=4:221258200;1allele=G/A;version=Hapmap2;RS=rs1064285119;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	228815333	228815432	.	+	.	Name=Tassel_length;B73v2_pos=4:221587829;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	228843409	228843508	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:221602700;1allele=A/G;version=Hapmap2;RS=rs1060862159;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	229003984	229004079	.	+	.	Name=Plant_height;B73v2_pos=4:221762253;1allele=C/T;version=Hapmap2;RS=rs818191746;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	229075391	229075490	.	+	.	Name=Cob_diameter;B73v2_pos=4:221892293;1allele=G/A;version=Hapmap2;RS=rs129934443;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	229247098	229247197	.	+	.	Name=Ear_height;B73v2_pos=4:222012235;1allele=A/G;version=Hapmap2;RS=rs824762333;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	229247098	229247197	.	+	.	Name=Plant_height;B73v2_pos=4:222012235;1allele=A/G;version=Hapmap2;RS=rs824762333;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	229531317	229531416	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:222287131;1allele=G/A;version=Hapmap2;RS=rs807433242;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	229732089	229732188	.	+	.	Name=Ear_height;B73v2_pos=4:222483293;1allele=A/G;version=Hapmap2;RS=rs129935487;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	229788753	229788852	.	+	.	Name=Ear_height;B73v2_pos=4:222539958;1allele=T/C;version=Hapmap1;RS=rs129935707;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	229874778	229874877	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:222625988;1allele=T/C;version=Hapmap2;RS=rs849515512;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	229895526	229895625	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:222646113;1allele=G/A;version=Hapmap2;RS=rs277633879;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	229931960	229932059	.	+	.	Name=Ear_height;B73v2_pos=4:222713299;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	229958667	229958766	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:222740262;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	229985926	229986025	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:222698098;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	230058332	230058431	.	+	.	Name=Days_to_silk;B73v2_pos=4:222808417;1allele=T/C;version=Hapmap2;RS=rs841226489;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	230061998	230062097	.	+	.	Name=Days_to_silk;B73v2_pos=4:222814605;1allele=A/G;version=Hapmap1;RS=rs132197130;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	230236232	230236331	.	+	.	Name=Leaf_length;B73v2_pos=4:223024313;1allele=C/T;version=Hapmap2;RS=rs824444732;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	230417061	230417160	.	+	.	Name=Stalk_strength;B73v2_pos=4:223164173;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	230674126	230674225	.	+	.	Name=Days_to_silk;B73v2_pos=4:223457763;1allele=A/G;version=Hapmap1;RS=rs820581238;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	230704168	230704267	.	+	.	Name=Ear_height;B73v2_pos=4:223516472;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	230841666	230841765	.	+	.	Name=Tassel_length;B73v2_pos=4:223631951;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	230947221	230947320	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:223720013;1allele=T/C;version=Hapmap2;RS=rs1060514564;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	231147644	231147743	.	+	.	Name=Tassel_length;B73v2_pos=4:223888345;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	231149072	231149171	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:223886917;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	231165318	231165417	.	+	.	Name=Ear_height;B73v2_pos=4:223870668;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	231235020	231235119	.	+	.	Name=Ear_height;B73v2_pos=4:224013188;1allele=A/G;version=Hapmap2;RS=rs1063020406;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	231235800	231235899	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:224013968;1allele=A/G;version=Hapmap2;RS=rs277637394;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	231267290	231267389	.	+	.	Name=Ear_height;B73v2_pos=4:224046065;1allele=C/T;version=Hapmap2;RS=rs805688047;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	231296254	231296353	.	+	.	Name=Ear_height;B73v2_pos=4:224075039;1allele=A/T;version=Hapmap2;RS=rs1060676652;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	231458239	231458338	.	+	.	Name=Plant_height;B73v2_pos=4:224234137;1allele=G/A;version=Hapmap2;RS=rs277638523;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	231463312	231463411	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:224239210;1allele=G/C;version=Hapmap2;RS=rs132197862;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	231463312	231463411	.	+	.	Name=Days_to_silk;B73v2_pos=4:224239210;1allele=G/C;version=Hapmap2;RS=rs132197862;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	231751216	231751315	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:224514078;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	231950848	231950947	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:224725410;1allele=C/A;version=Hapmap1;RS=rs129940063;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	231952339	231952438	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:224726901;1allele=A/T;version=Hapmap2;RS=rs726923319;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	232003999	232004098	.	+	.	Name=Ear_height;B73v2_pos=4:224847200;1allele=C/T;version=Hapmap2;RS=rs849760548;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	232039403	232039502	.	+	.	Name=Cob_diameter;B73v2_pos=4:224882606;1allele=G/A;version=Hapmap2;RS=rs1064227535;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	232044094	232044193	.	+	.	Name=Ear_height;B73v2_pos=4:224887297;1allele=G/A;version=Hapmap2;RS=rs129940299;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	232061660	232061759	.	+	.	Name=Cob_diameter;B73v2_pos=4:224904867;1allele=A/G;version=Hapmap2;RS=rs806409249;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	232070134	232070233	.	+	.	Name=Cob_diameter;B73v2_pos=4:224913345;1allele=C/T;version=Hapmap2;RS=rs129940416;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	232070886	232070985	.	+	.	Name=Ear_height;B73v2_pos=4:224914097;1allele=+/-;version=Hapmap2;RS=rs826494477;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	232097072	232097171	.	+	.	Name=Cob_diameter;B73v2_pos=4:224940266;1allele=A/G;version=Hapmap2;RS=rs129940496;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	232098914	232099013	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:224942089;1allele=G/T;version=Hapmap2;RS=rs129940513;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	233623349	233623448	.	+	.	Name=Cob_diameter;B73v2_pos=4:225234308;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	233660978	233661077	.	+	.	Name=Plant_height;B73v2_pos=4:225271894;1allele=C/T;version=Hapmap2;RS=rs129941562;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	233673892	233673991	.	+	.	Name=Ear_height;B73v2_pos=4:225284808;1allele=C/T;version=Hapmap2;RS=rs832114608;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	233909762	233909861	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:225504867;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	233931481	233931580	.	+	.	Name=Cob_diameter;B73v2_pos=4:225526592;1allele=A/G;version=Hapmap2;RS=rs830065678;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	233938105	233938204	.	+	.	Name=Cob_diameter;B73v2_pos=4:225533216;1allele=T/C;version=Hapmap2;RS=rs129942037;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	233961761	233961860	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:225556721;1allele=T/C;version=Hapmap2;RS=rs817498935;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	233969852	233969951	.	+	.	Name=Cob_diameter;B73v2_pos=4:225564812;1allele=G/A;version=Hapmap2;RS=rs129942171;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	233969985	233970084	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:225564945;1allele=A/T;version=Hapmap2;RS=rs843580599;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	233971618	233971717	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:225566578;1allele=T/C;version=Hapmap2;RS=rs828567167;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	233974077	233974176	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:225569177;1allele=A/G;version=Hapmap2;RS=rs820389604;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	233974078	233974177	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:225569178;1allele=A/G;version=Hapmap2;RS=rs828966049;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	233974086	233974185	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:225569186;1allele=T/C;version=Hapmap2;RS=rs828560436;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	233993726	233993825	.	+	.	Name=Stalk_strength;B73v2_pos=4:225588990;1allele=C/T;version=Hapmap2;RS=rs813798613;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	234101651	234101750	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:225772446;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	234101925	234102024	.	+	.	Name=Tassel_length;B73v2_pos=4:225772172;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	234125820	234125919	.	+	.	Name=Tassel_length;B73v2_pos=4:225707851;1allele=G/A;version=Hapmap2;RS=rs846749806;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	234128304	234128403	.	+	.	Name=Plant_height;B73v2_pos=4:225710335;1allele=A/G;version=Hapmap2;RS=rs129942485;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	234378607	234378706	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:226008323;1allele=T/C;version=Hapmap1;RS=rs132198768;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	234380810	234380909	.	+	.	Name=Cob_diameter;B73v2_pos=4:226010526;1allele=T/C;version=Hapmap2;RS=rs129942921;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	234418392	234418491	.	+	.	Name=Cob_diameter;B73v2_pos=4:225986030;1allele=A/G;version=Hapmap2;RS=rs277641622;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	234423582	234423681	.	+	.	Name=Ear_row_number;B73v2_pos=4:225991223;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	234475311	234475410	.	+	.	Name=Tassel_length;B73v2_pos=4:226067313;1allele=A/C;version=Hapmap1;RS=rs132198898;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	234601539	234601638	.	+	.	Name=Ear_row_number;B73v2_pos=4:226194079;1allele=T/A;version=Hapmap2;RS=rs1064426255;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	234649673	234649772	.	+	.	Name=Ear_row_number;B73v2_pos=4:226269600;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	234664176	234664275	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:226284110;1allele=T/A;version=Hapmap2;RS=rs832033545;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	234664198	234664297	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:226284132;1allele=G/T;version=Hapmap2;RS=rs828112427;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	234709589	234709688	.	+	.	Name=Days_to_silk;B73v2_pos=4:226252987;1allele=C/T;version=Hapmap2;RS=rs129943269;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	234711251	234711350	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:226254649;1allele=G/A;version=Hapmap2;RS=rs132199000;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	234711716	234711815	.	+	.	Name=Days_to_silk;B73v2_pos=4:226255114;1allele=T/C;version=Hapmap2;RS=rs277642324;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	234712125	234712224	.	+	.	Name=Days_to_silk;B73v2_pos=4:226255523;1allele=A/G;version=Hapmap2;RS=rs842878738;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	234712774	234712873	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:226256172;1allele=A/G;version=Hapmap2;RS=rs830754558;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	234713902	234714001	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:226257300;1allele=G/A;version=Hapmap2;RS=rs277642351;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	234759305	234759404	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:226342863;1allele=A/C;version=Hapmap1;RS=rs132199118;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	234818953	234819052	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=4:226403164;1allele=C/-;version=Hapmap1;RS=rs132199185;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	234902912	234903011	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:226457681;1allele=T/G;version=Hapmap2;RS=rs277642642;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	234905372	234905471	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:226460145;1allele=A/G;version=Hapmap2;RS=rs844102197;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	234905375	234905474	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:226460148;1allele=A/T;version=Hapmap2;RS=rs834878578;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	234963615	234963714	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:226545641;1allele=G/A;version=Hapmap2;RS=rs848890673;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	235094126	235094225	.	+	.	Name=Ear_row_number;B73v2_pos=4:226676085;1allele=C/G;version=Hapmap2;RS=rs129943960;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	235096693	235096792	.	+	.	Name=Ear_row_number;B73v2_pos=4:226678652;1allele=T/C;version=Hapmap2;RS=rs801950413;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	235097258	235097357	.	+	.	Name=Ear_row_number;B73v2_pos=4:226679217;1allele=G/T;version=Hapmap2;RS=rs129943971;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	235165159	235165258	.	+	.	Name=Tassel_length;B73v2_pos=4:226746737;1allele=A/C;version=Hapmap2;RS=rs277642991;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	235261850	235261949	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:226835497;1allele=A/T;version=Hapmap2;RS=rs847243470;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	235465093	235465192	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:227047649;1allele=G/A;version=Hapmap2;RS=rs809044411;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	235531876	235531975	.	+	.	Name=Ear_row_number;B73v2_pos=4:227112363;1allele=C/A;version=Hapmap2;RS=rs277643350;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	235603572	235603671	.	+	.	Name=Ear_row_number;B73v2_pos=4:227129790;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	235622319	235622418	.	+	.	Name=Ear_row_number;B73v2_pos=4:227200808;1allele=C/T;version=Hapmap2;RS=rs827420215;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	235640063	235640162	.	+	.	Name=Ear_row_number;B73v2_pos=4:227218643;1allele=C/T;version=Hapmap2;RS=rs277643491;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	235644673	235644772	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:227223253;1allele=G/A;version=Hapmap2;RS=rs129944634;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	235728219	235728318	.	+	.	Name=Leaf_length;B73v2_pos=4:227320446;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	235864571	235864670	.	+	.	Name=Ear_row_number;B73v2_pos=4:227443893;1allele=A/G;version=Hapmap2;RS=rs1061120726;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	235942517	235942616	.	+	.	Name=Ear_height;B73v2_pos=4:227522861;1allele=A/G;version=Hapmap2;RS=rs821066676;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	235942517	235942616	.	+	.	Name=Plant_height;B73v2_pos=4:227522861;1allele=A/G;version=Hapmap2;RS=rs821066676;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	235985290	235985389	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:227565603;1allele=G/T;version=Hapmap2;RS=rs815341594;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	236352263	236352362	.	+	.	Name=Ear_row_number;B73v2_pos=4:227939529;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	236472617	236472716	.	+	.	Name=Ear_height;B73v2_pos=4:228030355;1allele=G/T;version=Hapmap2;RS=rs835092242;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	236580431	236580530	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:228227875;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	236803754	236803853	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:228358592;1allele=A/G;version=Hapmap2;RS=rs828295207;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	237034282	237034381	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:228605272;1allele=G/A;version=Hapmap2;RS=rs129947406;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	237037220	237037319	.	+	.	Name=Plant_height;B73v2_pos=4:228608210;1allele=G/A;version=Hapmap2;RS=rs804419468;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	237057811	237057910	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:228628804;1allele=+/-;version=Hapmap2;RS=rs814483272;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	237197162	237197260	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:228766350;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	237238324	237238423	.	+	.	Name=Ear_row_number;B73v2_pos=4:228807527;1allele=G/A;version=Hapmap2;RS=rs847651620;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	237272410	237272509	.	+	.	Name=Cob_diameter;B73v2_pos=4:228833868;1allele=T/C;version=Hapmap2;RS=rs830218590;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	237286554	237286653	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:228848012;1allele=C/T;version=Hapmap2;RS=rs806899879;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	237354478	237354577	.	+	.	Name=Ear_row_number;B73v2_pos=4:228934484;1allele=G/A;version=Hapmap2;RS=rs819742439;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	237436547	237436646	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:229067002;1allele=C/A;version=Hapmap2;RS=rs820343666;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	237448316	237448415	.	+	.	Name=Ear_row_number;B73v2_pos=4:229078775;1allele=G/A;version=Hapmap2;RS=rs837817749;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	237518391	237518490	.	+	.	Name=Ear_row_number;B73v2_pos=4:229017276;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	237593693	237593792	.	+	.	Name=Ear_height;B73v2_pos=4:229160265;1allele=G/A;version=Hapmap2;RS=rs838835870;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	237593693	237593792	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:229160265;1allele=G/A;version=Hapmap2;RS=rs838835870;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	237729467	237729566	.	+	.	Name=Cob_diameter;B73v2_pos=4:229295178;1allele=G/A;version=Hapmap2;RS=rs277648444;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	237774101	237774200	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:229341385;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	237888081	237888180	.	+	.	Name=Ear_height;B73v2_pos=4:229487618;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	237888081	237888180	.	+	.	Name=Plant_height;B73v2_pos=4:229487618;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	237888088	237888187	.	+	.	Name=Ear_height;B73v2_pos=4:229487611;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	237906708	237906806	.	+	.	Name=Ear_height;B73v2_pos=4:229468639;1allele=T/G;version=Hapmap2;RS=rs277649008;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	237974820	237974919	.	+	.	Name=Tassel_length;B73v2_pos=4:229455212;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	238153677	238153776	.	+	.	Name=Cob_diameter;B73v2_pos=4:229734496;1allele=C/T;version=Hapmap2;RS=rs129949494;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238196469	238196568	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:229773591;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	238232326	238232425	.	+	.	Name=Cob_diameter;B73v2_pos=4:229817726;1allele=C/T;version=Hapmap2;RS=rs1061499070;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	238236168	238236267	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:229821568;1allele=G/A;version=Hapmap2;RS=rs129949637;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	238386795	238386894	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:229965298;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	238387464	238387563	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:229965967;1allele=G/C;version=Hapmap2;RS=rs129949956;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	238432172	238432271	.	+	.	Name=Ear_height;B73v2_pos=4:230004208;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	238480596	238480695	.	+	.	Name=Ear_height;B73v2_pos=4:230062928;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	238624536	238624635	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230185087;1allele=T/C;version=Hapmap2;RS=rs836726789;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	238640100	238640199	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230219288;1allele=C/T;version=Hapmap2;RS=rs814041876;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238652262	238652361	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230231451;1allele=C/T;version=Hapmap2;RS=rs834652865;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238678172	238678271	.	+	.	Name=Nitrate;B73v2_pos=4:230257076;1allele=G/C;version=Hapmap2;RS=rs847560528;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	238738283	238738382	.	+	.	Name=Tassel_length;B73v2_pos=4:230310527;1allele=C/T;version=Hapmap2;RS=rs843827606;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238741318	238741417	.	+	.	Name=Plant_height;B73v2_pos=4:230313562;1allele=C/T;version=Hapmap2;RS=rs809026023;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238775033	238775132	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230348138;1allele=C/T;version=Hapmap1;RS=rs132201498;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238778817	238778916	.	+	.	Name=Ear_height;B73v2_pos=4:230351922;1allele=C/A;version=Hapmap2;RS=rs277650218;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	238790200	238790299	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230363307;1allele=A/T;version=Hapmap2;RS=rs277650261;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	238791438	238791537	.	+	.	Name=Ear_height;B73v2_pos=4:230364545;1allele=G/A;version=Hapmap2;RS=rs824462235;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	238792014	238792113	.	+	.	Name=Ear_height;B73v2_pos=4:230365121;1allele=A/G;version=Hapmap2;RS=rs277650312;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	238795945	238796044	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:230369052;1allele=C/T;version=Hapmap2;RS=rs847056996;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238795971	238796070	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230369078;1allele=T/C;version=Hapmap1;RS=rs132201598;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	238796357	238796456	.	+	.	Name=Ear_height;B73v2_pos=4:230369464;1allele=C/T;version=Hapmap2;RS=rs803433512;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238796399	238796498	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:230369506;1allele=G/A;version=Hapmap2;RS=rs824827012;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	238822036	238822135	.	+	.	Name=Days_to_silk;B73v2_pos=4:230395147;1allele=G/A;version=Hapmap2;RS=rs808104769;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	238824039	238824138	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:230397150;1allele=C/T;version=Hapmap2;RS=rs277650611;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238826056	238826155	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230399167;1allele=A/G;version=Hapmap2;RS=rs847415319;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	238839052	238839151	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:230412163;1allele=A/G;version=Hapmap2;RS=rs819548354;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	238864126	238864225	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230437166;1allele=C/T;version=Hapmap2;RS=rs822035514;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238866182	238866281	.	+	.	Name=Ear_height;B73v2_pos=4:230439222;1allele=A/T;version=Hapmap2;RS=rs129950684;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	238868571	238868670	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230441611;1allele=G/C;version=Hapmap2;RS=rs129950712;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	238886602	238886701	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230459642;1allele=C/T;version=Hapmap2;RS=rs834816760;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238926005	238926104	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230499052;1allele=C/T;version=Hapmap2;RS=rs129950946;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238963081	238963180	.	+	.	Name=Ear_height;B73v2_pos=4:230536128;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	238965901	238966000	.	+	.	Name=Days_to_silk;B73v2_pos=4:230538945;1allele=A/G;version=Hapmap2;RS=rs835459273;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	238967016	238967115	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:230540060;1allele=C/T;version=Hapmap2;RS=rs831998617;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	238980175	238980274	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230553220;1allele=T/C;version=Hapmap2;RS=rs809123119;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	239011042	239011141	.	+	.	Name=Days_to_silk;B73v2_pos=4:230584087;1allele=C/T;version=Hapmap2;RS=rs277650930;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	239011042	239011141	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230584087;1allele=C/T;version=Hapmap2;RS=rs277650930;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	239013332	239013431	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:230586377;1allele=A/G;version=Hapmap2;RS=rs726093288;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	239017716	239017815	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:230590761;1allele=A/T;version=Hapmap2;RS=rs832642476;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	239167850	239167949	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230738048;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	239232226	239232325	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:230801852;1allele=T/C;version=Hapmap1;RS=rs132201981;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	239362237	239362336	.	+	.	Name=Plant_height;B73v2_pos=4:230931640;1allele=A/T;version=Hapmap2;RS=rs817686003;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	239376182	239376281	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:230945584;1allele=C/A;version=Hapmap2;RS=rs836647209;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	239409277	239409376	.	+	.	Name=Tassel_length;B73v2_pos=4:230980927;1allele=G/T;version=Hapmap2;RS=rs821506954;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	239433705	239433804	.	+	.	Name=Tassel_length;B73v2_pos=4:231004347;1allele=G/T;version=Hapmap2;RS=rs816067745;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	239536220	239536319	.	+	.	Name=Starch;B73v2_pos=4:231061423;1allele=A/C;version=Hapmap2;RS=rs810791186;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	239544220	239544319	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:231069423;1allele=T/C;version=Hapmap2;RS=rs805373240;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	239625434	239625533	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=4:231150871;1allele=T/C;version=Hapmap2;RS=rs1063066737;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	239625495	239625594	.	+	.	Name=Starch;B73v2_pos=4:231150932;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	239678959	239679058	.	+	.	Name=Tassel_length;B73v2_pos=4:231204019;1allele=G/A;version=Hapmap2;RS=rs843688325;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	239791338	239791437	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:231315150;1allele=G/A;version=Hapmap2;RS=rs848810924;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	239841742	239841841	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:231364481;1allele=C/T;version=Hapmap2;RS=rs828237448;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	239932623	239932722	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:231460150;1allele=A/C;version=Hapmap2;RS=rs845214933;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	239970364	239970463	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:231497233;1allele=T/C;version=Hapmap2;RS=rs820903502;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	239974699	239974798	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:231501568;1allele=T/C;version=Hapmap2;RS=rs844698116;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	239988987	239989086	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:231515856;1allele=A/C;version=Hapmap2;RS=rs132202606;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	240042726	240042825	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:231592207;1allele=/AGAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	240206208	240206307	.	+	.	Name=Cob_diameter;B73v2_pos=4:231722995;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	240337522	240337621	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:231862005;1allele=T/C;version=Hapmap2;RS=rs805253602;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	240384586	240384685	.	+	.	Name=Days_to_silk;B73v2_pos=4:231901965;1allele=T/A;version=Hapmap2;RS=rs1063437140;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	240387333	240387432	.	+	.	Name=Cob_diameter;B73v2_pos=4:231904712;1allele=A/G;version=Hapmap2;RS=rs129953526;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	240392259	240392358	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:231909638;1allele=G/C;version=Hapmap2;RS=rs814944124;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	240467231	240467330	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:232002879;1allele=C/T;version=Hapmap2;RS=rs836566699;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	241071841	241071940	.	+	.	Name=Starch;B73v2_pos=4:232593464;1allele=T/C;version=Hapmap2;RS=rs725999170;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	241150630	241150729	.	+	.	Name=Ear_row_number;B73v2_pos=4:232669180;1allele=A/C;version=Hapmap2;RS=rs828353751;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	241150630	241150729	.	+	.	Name=Cob_diameter;B73v2_pos=4:232669180;1allele=A/C;version=Hapmap2;RS=rs828353751;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	241181640	241181739	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:232700190;1allele=G/A;version=Hapmap2;RS=rs831010551;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	241197458	241197557	.	+	.	Name=Plant_height;B73v2_pos=4:232716008;1allele=C/A;version=Hapmap2;RS=rs846180523;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	241346495	241346594	.	+	.	Name=Tassel_length;B73v2_pos=4:232850824;1allele=AG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	241349518	241349617	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:232853847;1allele=A/G;version=Hapmap2;RS=rs849475087;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	241349518	241349617	.	+	.	Name=Plant_height;B73v2_pos=4:232853847;1allele=A/G;version=Hapmap2;RS=rs849475087;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	241376861	241376960	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:232881190;1allele=A/T;version=Hapmap2;RS=rs845723149;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	241439260	241439359	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:232943486;1allele=A/G;version=Hapmap2;RS=rs129956041;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	241480837	241480936	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:232977699;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	241488293	241488392	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:232968914;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	241489135	241489234	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:232968072;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	241515168	241515267	.	+	.	Name=Starch;B73v2_pos=4:233024702;1allele=G/A;version=Hapmap2;RS=rs807733742;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	241559377	241559476	.	+	.	Name=Tassel_length;B73v2_pos=4:233068751;1allele=C/T;version=Hapmap2;RS=rs129956276;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	241577833	241577932	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:233087205;1allele=G/-;version=Hapmap1;RS=rs132203571;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	241577833	241577932	.	+	.	Name=Days_to_silk;B73v2_pos=4:233087205;1allele=G/-;version=Hapmap1;RS=rs132203571;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	241610424	241610523	.	+	.	Name=Days_to_silk;B73v2_pos=4:233120517;1allele=C/T;version=Hapmap2;RS=rs277654290;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	241610424	241610523	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:233120517;1allele=C/T;version=Hapmap2;RS=rs277654290;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	241708215	241708314	.	+	.	Name=Cob_diameter;B73v2_pos=4:233215216;1allele=A/G;version=Hapmap2;RS=rs850427314;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	241718918	241719017	.	+	.	Name=Cob_diameter;B73v2_pos=4:233225919;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	241756700	241756799	.	+	.	Name=Cob_diameter;B73v2_pos=4:233254349;1allele=T/C;version=Hapmap2;RS=rs132203934;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	241831443	241831542	.	+	.	Name=Tassel_length;B73v2_pos=4:233326081;1allele=A/T;version=Hapmap2;RS=rs820486592;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	241845348	241845447	.	+	.	Name=Cob_diameter;B73v2_pos=4:233339986;1allele=C/A;version=Hapmap2;RS=rs846433265;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	241872140	241872239	.	+	.	Name=Tassel_length;B73v2_pos=4:233415234;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	241947982	241948081	.	+	.	Name=Cob_diameter;B73v2_pos=4:233434191;1allele=C/G;version=Hapmap2;RS=rs839383329;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	241992334	241992433	.	+	.	Name=Starch;B73v2_pos=4:233478555;1allele=G/A;version=Hapmap2;RS=rs277654951;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	242141242	242141341	.	+	.	Name=Plant_height;B73v2_pos=4:233625528;1allele=G/T;version=Hapmap2;RS=rs132204086;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	242157392	242157491	.	+	.	Name=Cob_diameter;B73v2_pos=4:233641947;1allele=C/T;version=Hapmap2;RS=rs845881402;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	242166806	242166905	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:233651356;1allele=C/A;version=Hapmap2;RS=rs277655265;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	242301196	242301295	.	+	.	Name=Days_to_silk;B73v2_pos=4:233776029;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242367158	242367257	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233846674;1allele=A/T;version=Hapmap2;RS=rs804385398;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	242377919	242378018	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233857435;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242391279	242391378	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233870795;1allele=A/C;version=Hapmap2;RS=rs277655674;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	242395496	242395595	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233874915;1allele=G/A;version=Hapmap2;RS=rs849792611;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	242397138	242397237	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233876563;1allele=C/T;version=Hapmap2;RS=rs844719344;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	242397233	242397332	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233876658;1allele=G/A;version=Hapmap2;RS=rs727159460;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	242425154	242425253	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233904579;1allele=G/T;version=Hapmap2;RS=rs815309120;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	242427186	242427285	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233906611;1allele=G/T;version=Hapmap2;RS=rs835688134;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	242439896	242439994	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233919321;1allele=A/G;version=Hapmap2;RS=rs725143445;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	242447610	242447709	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233927036;1allele=G/A;version=Hapmap2;RS=rs848989169;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	242452382	242452481	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233931808;1allele=C/T;version=Hapmap2;RS=rs803831338;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	242484151	242484250	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233964421;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242484681	242484780	.	+	.	Name=Plant_height;B73v2_pos=4:233963891;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242498581	242498680	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233949990;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242498613	242498712	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:233949958;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242647493	242647592	.	+	.	Name=Leaf_length;B73v2_pos=4:234115829;1allele=G/C;version=Hapmap1;RS=rs132204699;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	242649830	242649929	.	+	.	Name=Ear_row_number;B73v2_pos=4:234118166;1allele=T/C;version=Hapmap1;RS=rs132204762;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	242748818	242748917	.	+	.	Name=Cob_diameter;B73v2_pos=4:234218183;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242751223	242751322	.	+	.	Name=Cob_diameter;B73v2_pos=4:234220588;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	242926052	242926151	.	+	.	Name=Leaf_length;B73v2_pos=4:234391783;1allele=G/A;version=Hapmap2;RS=rs132205007;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	242938264	242938363	.	+	.	Name=Leaf_length;B73v2_pos=4:234403984;1allele=C/T;version=Hapmap2;RS=rs277656539;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	242946203	242946302	.	+	.	Name=Leaf_length;B73v2_pos=4:234411869;1allele=A/C;version=Hapmap2;RS=rs816502009;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	242946205	242946304	.	+	.	Name=Leaf_length;B73v2_pos=4:234411871;1allele=C/T;version=Hapmap2;RS=rs808763360;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	242946764	242946863	.	+	.	Name=Plant_height;B73v2_pos=4:234412430;1allele=C/T;version=Hapmap2;RS=rs838297993;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	242958159	242958258	.	+	.	Name=Cob_diameter;B73v2_pos=4:234423830;1allele=G/T;version=Hapmap2;RS=rs129958583;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	242958192	242958291	.	+	.	Name=Cob_diameter;B73v2_pos=4:234423863;1allele=G/C;version=Hapmap2;RS=rs132205234;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	242965691	242965790	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:234431362;1allele=C/T;version=Hapmap2;RS=rs129958630;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	242965699	242965798	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:234431370;1allele=C/T;version=Hapmap2;RS=rs129958631;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	242980684	242980783	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:234446355;1allele=C/A;version=Hapmap2;RS=rs277656660;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	242981307	242981406	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:234446978;1allele=A/G;version=Hapmap2;RS=rs129958653;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	242984756	242984855	.	+	.	Name=Leaf_length;B73v2_pos=4:234450427;1allele=T/C;version=Hapmap2;RS=rs834915336;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	242997439	242997538	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:234463110;1allele=C/T;version=Hapmap2;RS=rs819796533;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243002565	243002664	.	+	.	Name=Leaf_length;B73v2_pos=4:234468236;1allele=T/C;version=Hapmap2;RS=rs811830513;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243003245	243003344	.	+	.	Name=Leaf_length;B73v2_pos=4:234468916;1allele=C/T;version=Hapmap2;RS=rs805339731;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243089198	243089297	.	+	.	Name=Starch;B73v2_pos=4:234554875;1allele=A/T;version=Hapmap2;RS=rs1062331400;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	243130395	243130494	.	+	.	Name=Leaf_length;B73v2_pos=4:234597023;1allele=G/A;version=Hapmap2;RS=rs850012028;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	243146215	243146314	.	+	.	Name=Leaf_length;B73v2_pos=4:234612843;1allele=G/A;version=Hapmap2;RS=rs810179583;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	243154419	243154518	.	+	.	Name=Cob_diameter;B73v2_pos=4:234619526;1allele=T/C;version=Hapmap2;RS=rs818939755;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243186469	243186568	.	+	.	Name=Height_above_ear;B73v2_pos=4:234651338;1allele=T/C;version=Hapmap2;RS=rs805359091;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243251138	243251237	.	+	.	Name=Plant_height;B73v2_pos=4:234712826;1allele=T/C;version=Hapmap2;RS=rs724763426;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243255900	243255999	.	+	.	Name=Plant_height;B73v2_pos=4:234717588;1allele=T/G;version=Hapmap2;RS=rs129959154;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	243257826	243257925	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:234719514;1allele=-/+;version=Hapmap2;RS=rs842718906;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	243269599	243269698	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234731287;1allele=A/G;version=Hapmap2;RS=rs132205603;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	243270712	243270811	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234732400;1allele=G/T;version=Hapmap2;RS=rs277657390;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	243339828	243339927	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234789935;1allele=/AT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	243375146	243375245	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234832545;1allele=C/T;version=Hapmap2;RS=rs129959505;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243377067	243377166	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234834466;1allele=A/C;version=Hapmap1;RS=rs132205965;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	243399406	243399505	.	+	.	Name=Plant_height;B73v2_pos=4:234856805;1allele=G/T;version=Hapmap2;RS=rs129959632;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	243416862	243416961	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234874261;1allele=C/A;version=Hapmap1;RS=rs132206022;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243417050	243417149	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234874449;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	243433793	243433892	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234891192;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	243452216	243452315	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:234909605;1allele=C/T;version=Hapmap2;RS=rs129959819;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243452666	243452765	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234910055;1allele=T/C;version=Hapmap2;RS=rs277657804;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243455286	243455385	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:234911671;1allele=C/T;version=Hapmap2;RS=rs819656163;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243458641	243458740	.	+	.	Name=Starch;B73v2_pos=4:234915026;1allele=A/G;version=Hapmap2;RS=rs839830958;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	243460792	243460891	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:234917177;1allele=C/T;version=Hapmap2;RS=rs132206126;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243555570	243555669	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:235011965;1allele=C/A;version=Hapmap2;RS=rs822247123;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	243560455	243560554	.	+	.	Name=Ear_row_number;B73v2_pos=4:235016850;1allele=C/T;version=Hapmap2;RS=rs813342130;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243633128	243633227	.	+	.	Name=Starch;B73v2_pos=4:235078108;1allele=C/A;version=Hapmap2;RS=rs129960050;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	243661746	243661845	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:235104301;1allele=C/T;version=Hapmap2;RS=rs132206213;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243666484	243666583	.	+	.	Name=Starch;B73v2_pos=4:235117906;1allele=C/G;version=Hapmap1;RS=rs132206262;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	243667886	243667985	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:235119309;1allele=T/C;version=Hapmap1;RS=rs132206314;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243747513	243747612	.	+	.	Name=Cob_diameter;B73v2_pos=4:235204225;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	243788375	243788474	.	+	.	Name=Starch;B73v2_pos=4:235228444;1allele=G/A;version=Hapmap2;RS=rs845819168;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	243793693	243793792	.	+	.	Name=Ear_row_number;B73v2_pos=4:235234411;1allele=C/T;version=Hapmap1;RS=rs831406526;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243829470	243829569	.	+	.	Name=Cob_diameter;B73v2_pos=4:235268142;1allele=G/A;version=Hapmap2;RS=rs277658363;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	243836342	243836441	.	+	.	Name=Cob_diameter;B73v2_pos=4:235275014;1allele=C/T;version=Hapmap2;RS=rs129960422;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	243880541	243880640	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235322777;1allele=/TCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	243884360	243884459	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235326596;1allele=C/T;version=Hapmap1;RS=rs132206868;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	243887565	243887664	.	+	.	Name=Tassel_length;B73v2_pos=4:235329689;1allele=T/A;version=Hapmap1;RS=rs132206908;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	243917090	243917189	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:235359258;1allele=C/A;version=Hapmap2;RS=rs802482321;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	243973452	243973551	.	+	.	Name=Cob_diameter;B73v2_pos=4:235384697;1allele=G/A;version=Hapmap2;RS=rs277658678;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	243983366	243983465	.	+	.	Name=Cob_diameter;B73v2_pos=4:235393018;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	243988277	243988376	.	+	.	Name=Ear_height;B73v2_pos=4:235397929;1allele=G/T;version=Hapmap2;RS=rs832537870;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	243990477	243990576	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235400129;1allele=G/A;version=Hapmap1;RS=rs132207172;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	243991090	243991189	.	+	.	Name=Tassel_length;B73v2_pos=4:235400742;1allele=C/T;version=Hapmap2;RS=rs812922596;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244045817	244045916	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235455472;1allele=G/A;version=Hapmap2;RS=rs839763669;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	244133039	244133138	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235545456;1allele=T/C;version=Hapmap2;RS=rs803019403;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244133991	244134090	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235546408;1allele=A/G;version=Hapmap2;RS=rs132207360;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	244144941	244145040	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235557358;1allele=T/G;version=Hapmap2;RS=rs827004479;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	244146956	244147055	.	+	.	Name=Cob_diameter;B73v2_pos=4:235559373;1allele=A/T;version=Hapmap2;RS=rs841759853;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	244146956	244147055	.	+	.	Name=Ear_row_number;B73v2_pos=4:235559373;1allele=A/T;version=Hapmap2;RS=rs841759853;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	244149895	244149994	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:235562312;1allele=T/C;version=Hapmap2;RS=rs840106446;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	244158708	244158807	.	+	.	Name=Ear_height;B73v2_pos=4:235571127;1allele=C/T;version=Hapmap2;RS=rs132207324;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	244193831	244193930	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235605767;1allele=A/T;version=Hapmap2;RS=rs845235946;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	244277189	244277288	.	+	.	Name=Starch;B73v2_pos=4:235685423;1allele=C/T;version=Hapmap2;RS=rs834722363;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244311110	244311209	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:235719259;1allele=T/C;version=Hapmap2;RS=rs132207491;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	244311227	244311326	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=4:235719376;1allele=+/-;version=Hapmap2;RS=rs814047278;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	244314039	244314138	.	+	.	Name=Cob_diameter;B73v2_pos=4:235722188;1allele=C/A;version=Hapmap2;RS=rs132207545;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	244314580	244314679	.	+	.	Name=Cob_diameter;B73v2_pos=4:235722730;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	244315654	244315753	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235723804;1allele=C/G;version=Hapmap2;RS=rs277659771;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	244315658	244315757	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:235723808;1allele=A/G;version=Hapmap2;RS=rs277659772;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	244352241	244352340	.	+	.	Name=Cob_diameter;B73v2_pos=4:235760028;1allele=C/A;version=Hapmap2;RS=rs822387251;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	244658198	244658297	.	+	.	Name=Cob_diameter;B73v2_pos=4:236087876;1allele=G/C;version=Hapmap2;RS=rs132207844;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	244658198	244658297	.	+	.	Name=Ear_row_number;B73v2_pos=4:236087876;1allele=G/C;version=Hapmap2;RS=rs132207844;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	244659825	244659924	.	+	.	Name=Plant_height;B73v2_pos=4:236089503;1allele=A/G;version=Hapmap2;RS=rs840814862;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	244669832	244669931	.	+	.	Name=Ear_row_number;B73v2_pos=4:236099507;1allele=A/G;version=Hapmap2;RS=rs724783321;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	244685070	244685169	.	+	.	Name=Starch;B73v2_pos=4:236114746;1allele=C/T;version=Hapmap2;RS=rs129961751;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244734704	244734803	.	+	.	Name=Cob_diameter;B73v2_pos=4:236209262;1allele=T/A;version=Hapmap2;RS=rs807963834;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	244738143	244738242	.	+	.	Name=Ear_row_number;B73v2_pos=4:236212389;1allele=A/T;version=Hapmap2;RS=rs129961952;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	244790076	244790175	.	+	.	Name=Ear_row_number;B73v2_pos=4:236174131;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	244795126	244795225	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:236169081;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	244877495	244877594	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:236316998;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	244935827	244935926	.	+	.	Name=Starch;B73v2_pos=4:236368560;1allele=T/C;version=Hapmap2;RS=rs277660835;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	244938820	244938919	.	+	.	Name=Starch;B73v2_pos=4:236371553;1allele=T/C;version=Hapmap2;RS=rs277660839;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244939731	244939830	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:236372464;1allele=G/A;version=Hapmap2;RS=rs129962212;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	244953799	244953898	.	+	.	Name=Plant_height;B73v2_pos=4:236386506;1allele=C/T;version=Hapmap2;RS=rs823835893;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244954589	244954688	.	+	.	Name=Ear_height;B73v2_pos=4:236387296;1allele=C/T;version=Hapmap2;RS=rs129962267;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	244954667	244954766	.	+	.	Name=Ear_row_number;B73v2_pos=4:236387374;1allele=G/A;version=Hapmap2;RS=rs129962268;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	244954687	244954786	.	+	.	Name=Cob_diameter;B73v2_pos=4:236387394;1allele=G/T;version=Hapmap2;RS=rs822237139;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	244954815	244954914	.	+	.	Name=Ear_row_number;B73v2_pos=4:236387522;1allele=C/A;version=Hapmap2;RS=rs277660887;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	244954819	244954918	.	+	.	Name=Ear_row_number;B73v2_pos=4:236387526;1allele=A/T;version=Hapmap2;RS=rs277660888;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	244960092	244960191	.	+	.	Name=Ear_row_number;B73v2_pos=4:236392799;1allele=C/T;version=Hapmap2;RS=rs132208280;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244960092	244960191	.	+	.	Name=Cob_diameter;B73v2_pos=4:236392799;1allele=C/T;version=Hapmap2;RS=rs132208280;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	244960232	244960331	.	+	.	Name=Ear_row_number;B73v2_pos=4:236392939;1allele=G/T;version=Hapmap1;RS=rs132208284;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	244960428	244960527	.	+	.	Name=Ear_row_number;B73v2_pos=4:236393135;1allele=A/G;version=Hapmap1;RS=rs132208288;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	244960986	244961085	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:236393693;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	244961174	244961273	.	+	.	Name=Ear_row_number;B73v2_pos=4:236393881;1allele=cnv;version=CNV_genic;RS=rs132208316;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	244963595	244963694	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:236396302;1allele=A/G;version=Hapmap2;RS=rs132208376;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	244969469	244969568	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:236402168;1allele=/GTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	244973922	244974021	.	+	.	Name=Tassel_length;B73v2_pos=4:236406621;1allele=/TA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	244985656	244985755	.	+	.	Name=Tassel_length;B73v2_pos=4:236418355;1allele=T/C;version=Hapmap2;RS=rs846749717;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	245054332	245054431	.	+	.	Name=Starch;B73v2_pos=4:236480205;1allele=C/T;version=Hapmap2;RS=rs277660952;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245055453	245055552	.	+	.	Name=Leaf_length;B73v2_pos=4:236481325;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	245099143	245099242	.	+	.	Name=Cob_diameter;B73v2_pos=4:236524488;1allele=A/G;version=Hapmap2;RS=rs1062866623;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	245148328	245148427	.	+	.	Name=Nitrate;B73v2_pos=4:236573612;1allele=C/T;version=Hapmap2;RS=rs831662447;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245289419	245289518	.	+	.	Name=Nitrate;B73v2_pos=4:236704505;1allele=C/T;version=Hapmap2;RS=rs847717273;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245316429	245316528	.	+	.	Name=Cob_diameter;B73v2_pos=4:236731514;1allele=G/C;version=Hapmap2;RS=rs132208981;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	245325681	245325780	.	+	.	Name=Glucose;B73v2_pos=4:236740766;1allele=T/G;version=Hapmap2;RS=rs811149610;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	245339193	245339292	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:236754278;1allele=C/T;version=Hapmap2;RS=rs809790029;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245447929	245448028	.	+	.	Name=Tassel_length;B73v2_pos=4:236858667;1allele=T/G;version=Hapmap2;RS=rs132209074;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	245449133	245449232	.	+	.	Name=Tassel_length;B73v2_pos=4:236859871;1allele=T/G;version=Hapmap1;RS=rs132209077;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	245449977	245450076	.	+	.	Name=Tassel_length;B73v2_pos=4:236860715;1allele=T/C;version=Hapmap1;RS=rs132209087;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	245450240	245450339	.	+	.	Name=Tassel_length;B73v2_pos=4:236860978;1allele=T/A;version=Hapmap2;RS=rs832194055;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	245450253	245450352	.	+	.	Name=Tassel_length;B73v2_pos=4:236860991;1allele=T/G;version=Hapmap2;RS=rs823243810;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	245451069	245451168	.	+	.	Name=Tassel_length;B73v2_pos=4:236861807;1allele=A/T;version=Hapmap2;RS=rs818283131;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	245468508	245468607	.	+	.	Name=Cob_diameter;B73v2_pos=4:236879247;1allele=A/T;version=Hapmap1;RS=rs132209099;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	245485105	245485204	.	+	.	Name=Tassel_length;B73v2_pos=4:236895654;1allele=A/G;version=Hapmap1;RS=rs129962938;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	245486102	245486201	.	+	.	Name=Tassel_length;B73v2_pos=4:236896651;1allele=G/A;version=Hapmap2;RS=rs277661433;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	245497594	245497693	.	+	.	Name=Leaf_length;B73v2_pos=4:236908145;1allele=C/T;version=Hapmap2;RS=rs132209313;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245508664	245508763	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:236919216;1allele=C/T;version=Hapmap2;RS=rs132209389;2ref_allele=CG;3alt_allele=C
chr4	Wallace_2014	SNP	245548680	245548779	.	+	.	Name=Cob_diameter;B73v2_pos=4:236956660;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	245550682	245550781	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:236958662;1allele=G/A;version=Hapmap1;RS=rs132209596;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	245550682	245550781	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:236958662;1allele=G/A;version=Hapmap1;RS=rs132209596;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	245626643	245626742	.	+	.	Name=Tassel_length;B73v2_pos=4:237038640;1allele=A/G;version=Hapmap2;RS=rs813019482;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	245630237	245630336	.	+	.	Name=Leaf_length;B73v2_pos=4:237042234;1allele=C/T;version=Hapmap1;RS=rs129963268;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245630602	245630701	.	+	.	Name=Leaf_length;B73v2_pos=4:237042599;1allele=A/G;version=Hapmap1;RS=rs129963273;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	245630648	245630747	.	+	.	Name=Leaf_length;B73v2_pos=4:237042645;1allele=C/A;version=Hapmap2;RS=rs132209693;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	245630653	245630752	.	+	.	Name=Leaf_length;B73v2_pos=4:237042650;1allele=C/A;version=Hapmap1;RS=rs132209694;2ref_allele=C;3alt_allele=A
chr4	Wallace_2014	SNP	245631694	245631793	.	+	.	Name=Tassel_length;B73v2_pos=4:237043691;1allele=C/T;version=Hapmap2;RS=rs824503545;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245633543	245633642	.	+	.	Name=Tassel_length;B73v2_pos=4:237045540;1allele=A/G;version=Hapmap2;RS=rs129963289;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	245635103	245635202	.	+	.	Name=Starch;B73v2_pos=4:237047100;1allele=G/A;version=Hapmap2;RS=rs830480588;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	245635275	245635374	.	+	.	Name=Tassel_length;B73v2_pos=4:237047272;1allele=T/G;version=Hapmap2;RS=rs129963309;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	245635360	245635459	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237047357;1allele=T/C;version=Hapmap2;RS=rs811837743;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	245635642	245635741	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237047639;1allele=C/T;version=Hapmap2;RS=rs818036053;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245730523	245730622	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237139715;1allele=G/T;version=Hapmap2;RS=rs132209723;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	245730690	245730789	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237139882;1allele=C/T;version=Hapmap2;RS=rs132209727;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245731146	245731245	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237140338;1allele=T/C;version=Hapmap2;RS=rs726137102;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	245736619	245736718	.	+	.	Name=Cob_diameter;B73v2_pos=4:237145811;1allele=C/G;version=Hapmap1;RS=rs132209860;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245739607	245739706	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:237148799;1allele=T/C;version=Hapmap1;RS=rs132209916;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	245739616	245739715	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:237148808;1allele=A/C;version=Hapmap1;RS=rs132209917;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	245832199	245832298	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237241940;1allele=C/T;version=Hapmap2;RS=rs834295019;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	245858340	245858439	.	+	.	Name=Cob_diameter;B73v2_pos=4:237268083;1allele=C/G;version=Hapmap2;RS=rs832969588;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	245899076	245899175	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:237312533;1allele=G/A;version=Hapmap2;RS=rs129963587;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	245899392	245899491	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:237312849;1allele=G/A;version=Hapmap2;RS=rs129963589;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	245899435	245899534	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:237312892;1allele=G/A;version=Hapmap2;RS=rs129963590;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	245901741	245901840	.	+	.	Name=Cob_diameter;B73v2_pos=4:237315198;1allele=C/A;version=Hapmap2;RS=rs277661930;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	245902550	245902649	.	+	.	Name=Leaf_length;B73v2_pos=4:237316007;1allele=T/A;version=Hapmap1;RS=rs132210133;2ref_allele=T;3alt_allele=A
chr4	Wallace_2014	SNP	245904795	245904894	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:237318252;1allele=C/T;version=Hapmap2;RS=rs132210159;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	245913012	245913111	.	+	.	Name=Glucose;B73v2_pos=4:237326469;1allele=G/A;version=Hapmap2;RS=rs823109958;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	245948592	245948691	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:237362065;1allele=A/T;version=Hapmap2;RS=rs816150117;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	245981642	245981741	.	+	.	Name=Starch;B73v2_pos=4:237395116;1allele=A/C;version=Hapmap2;RS=rs727047285;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	246044992	246045091	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237455518;1allele=T/G;version=Hapmap2;RS=rs132210496;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	246091048	246091146	.	+	.	Name=Leaf_length;B73v2_pos=4:237484395;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246102537	246102636	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237495877;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246105539	246105638	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237498879;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246105678	246105777	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237499018;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246109154	246109253	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237502494;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246118665	246118764	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:237511999;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246118963	246119062	.	+	.	Name=Nitrate;B73v2_pos=4:237512297;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246119972	246120071	.	+	.	Name=Nitrate;B73v2_pos=4:237513306;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246121359	246121458	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:237514693;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246179696	246179795	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:237572442;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246206913	246207012	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:237599662;1allele=T/C;version=Hapmap2;RS=rs277662686;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	246320140	246320239	.	+	.	Name=Nitrate;B73v2_pos=4:237712971;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	246390923	246391022	.	+	.	Name=Starch;B73v2_pos=4:237778421;1allele=T/G;version=Hapmap2;RS=rs132211249;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	246415151	246415250	.	+	.	Name=Nitrate;B73v2_pos=4:237802651;1allele=A/G;version=Hapmap2;RS=rs835167111;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	246493620	246493719	.	+	.	Name=Leaf_width;B73v2_pos=4:237881608;1allele=C/T;version=Hapmap2;RS=rs277663059;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	246561292	246561391	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=4:237944929;1allele=C/T;version=Hapmap2;RS=rs822153641;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	246799297	246799396	.	+	.	Name=Cob_diameter;B73v2_pos=4:238161820;1allele=C/T;version=Hapmap2;RS=rs726435275;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	246856400	246856499	.	+	.	Name=Cob_diameter;B73v2_pos=4:238218414;1allele=G/A;version=Hapmap2;RS=rs840467419;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	246864254	246864353	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=4:238226268;1allele=G/T;version=Hapmap2;RS=rs802035778;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	247076422	247076521	.	+	.	Name=Cob_diameter;B73v2_pos=4:238427457;1allele=G/T;version=Hapmap2;RS=rs1061651802;2ref_allele=T;3alt_allele=G
chr4	Wallace_2014	SNP	247198509	247198608	.	+	.	Name=Nitrate;B73v2_pos=4:238472203;1allele=A/G;version=Hapmap2;RS=rs820963172;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	247205539	247205638	.	+	.	Name=Nitrate;B73v2_pos=4:238479228;1allele=C/T;version=Hapmap1;RS=rs132212442;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	247706139	247706238	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:238987364;1allele=A/T;version=Hapmap1;RS=rs132212841;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	247715607	247715706	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:238996831;1allele=T/C;version=Hapmap2;RS=rs814752953;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	247719560	247719659	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239000784;1allele=C/A;version=Hapmap2;RS=rs277664909;2ref_allele=A;3alt_allele=C
chr4	Wallace_2014	SNP	247738056	247738155	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239019281;1allele=G/A;version=Hapmap2;RS=rs277664963;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	247741561	247741660	.	+	.	Name=Starch;B73v2_pos=4:239022786;1allele=T/G;version=Hapmap2;RS=rs129967129;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	247774739	247774838	.	+	.	Name=Starch;B73v2_pos=4:239054563;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	247775218	247775317	.	+	.	Name=Starch;B73v2_pos=4:239055042;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr4	Wallace_2014	SNP	247787362	247787461	.	+	.	Name=Starch;B73v2_pos=4:239067132;1allele=T/A;version=Hapmap2;RS=rs277665056;2ref_allele=A;3alt_allele=T
chr4	Wallace_2014	SNP	247788419	247788518	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239068190;1allele=A/G;version=Hapmap2;RS=rs1061837271;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	247788594	247788693	.	+	.	Name=Starch;B73v2_pos=4:239068365;1allele=T/C;version=Hapmap2;RS=rs818633780;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	247789007	247789106	.	+	.	Name=Starch;B73v2_pos=4:239068778;1allele=A/G;version=Hapmap2;RS=rs129967153;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	247845748	247845847	.	+	.	Name=Nitrate;B73v2_pos=4:239123281;1allele=G/T;version=Hapmap2;RS=rs726744420;2ref_allele=G;3alt_allele=T
chr4	Wallace_2014	SNP	247874799	247874898	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:239149631;1allele=G/A;version=Hapmap2;RS=rs832402506;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	247877494	247877593	.	+	.	Name=Stalk_strength;B73v2_pos=4:239152326;1allele=A/G;version=Hapmap2;RS=rs277665435;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	247898151	247898250	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239213648;1allele=G/A;version=Hapmap2;RS=rs1061434404;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	247904398	247904497	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239222128;1allele=G/A;version=Hapmap2;RS=rs848431479;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	247962096	247962195	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239234622;1allele=G/A;version=Hapmap2;RS=rs1061031171;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	247991883	247991982	.	+	.	Name=Ear_height;B73v2_pos=4:239347027;1allele=A/G;version=Hapmap2;RS=rs277665843;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	247994123	247994222	.	+	.	Name=Ear_height;B73v2_pos=4:239349265;1allele=G/C;version=Hapmap2;RS=rs277665850;2ref_allele=G;3alt_allele=C
chr4	Wallace_2014	SNP	248050109	248050208	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239322593;1allele=T/C;version=Hapmap2;RS=rs827286386;2ref_allele=T;3alt_allele=C
chr4	Wallace_2014	SNP	248328169	248328268	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:239628382;1allele=G/A;version=Hapmap2;RS=rs810864765;2ref_allele=G;3alt_allele=A
chr4	Wallace_2014	SNP	248388745	248388844	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:239689200;1allele=C/G;version=Hapmap2;RS=rs837603724;2ref_allele=C;3alt_allele=G
chr4	Wallace_2014	SNP	248752256	248752355	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:240036757;1allele=C/T;version=Hapmap2;RS=rs850055158;2ref_allele=C;3alt_allele=T
chr4	Wallace_2014	SNP	248769545	248769644	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:240054242;1allele=A/G;version=Hapmap2;RS=rs819460032;2ref_allele=A;3alt_allele=G
chr4	Wallace_2014	SNP	248828431	248828530	.	+	.	Name=Starch;B73v2_pos=4:240113788;1allele=G/A;version=Hapmap1;RS=rs132214903;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	304244	304343	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:19559;1allele=C/T;version=Hapmap2;RS=rs846668651;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	320523	320622	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:35790;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	320523	320622	.	+	.	Name=Ear_row_number;B73v2_pos=5:35790;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	338668	338767	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:53935;1allele=C/T;version=Hapmap2;RS=rs824294891;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	355049	355148	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:70316;1allele=G/A;version=Hapmap2;RS=rs277669871;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	385218	385317	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:101430;1allele=T/C;version=Hapmap2;RS=rs831856532;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	641682	641781	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:314476;1allele=C/T;version=Hapmap2;RS=rs840028213;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	674837	674936	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:362920;1allele=A/G;version=Hapmap2;RS=rs821360968;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	871523	871622	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:560744;1allele=C/T;version=Hapmap2;RS=rs821347604;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	958542	958641	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:648380;1allele=A/T;version=Hapmap2;RS=rs277671065;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	1114432	1114531	.	+	.	Name=Starch;B73v2_pos=5:810299;1allele=A/G;version=Hapmap2;RS=rs1064101603;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	1194715	1194814	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:886034;1allele=C/T;version=Hapmap2;RS=rs277671800;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	1236231	1236330	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:927550;1allele=C/T;version=Hapmap2;RS=rs277672019;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	1238645	1238744	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:929964;1allele=T/C;version=Hapmap1;RS=rs131471133;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	1360205	1360304	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1049462;1allele=T/C;version=Hapmap1;RS=rs822905867;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	1361518	1361617	.	+	.	Name=Leaf_length;B73v2_pos=5:1050775;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	1361538	1361637	.	+	.	Name=Days_to_silk;B73v2_pos=5:1050795;1allele=C/G;version=Hapmap2;RS=rs847574655;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	1362132	1362231	.	+	.	Name=Days_to_silk;B73v2_pos=5:1051389;1allele=C/G;version=Hapmap1;RS=rs835309954;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	1387348	1387447	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1076033;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	1396599	1396698	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1085284;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	1405269	1405368	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:1102784;1allele=C/T;version=Hapmap2;RS=rs810228263;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	1439606	1439705	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:1126721;1allele=A/G;version=Hapmap2;RS=rs277672541;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	1442069	1442168	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1129184;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	1497598	1497697	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:1185482;1allele=A/G;version=Hapmap1;RS=rs131471515;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	1497888	1497987	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:1185772;1allele=C/T;version=Hapmap2;RS=rs277672622;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	1544440	1544539	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1232275;1allele=C/A;version=Hapmap2;RS=rs277672763;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	1572314	1572413	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:1260091;1allele=G/A;version=Hapmap2;RS=rs277672858;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	1572314	1572413	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1260091;1allele=G/A;version=Hapmap2;RS=rs277672858;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	1575875	1575974	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:1263652;1allele=C/T;version=Hapmap2;RS=rs845891660;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	1621257	1621356	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1314029;1allele=G/A;version=Hapmap2;RS=rs277672901;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	1629488	1629587	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:1322260;1allele=C/A;version=Hapmap2;RS=rs277672980;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	1630753	1630852	.	+	.	Name=Glucose;B73v2_pos=5:1323525;1allele=C/T;version=Hapmap2;RS=rs277672992;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	1644962	1645061	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:1338596;1allele=C/T;version=Hapmap2;RS=rs129973622;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	1645486	1645585	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:1339120;1allele=C/T;version=Hapmap2;RS=rs129973625;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	1757166	1757265	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1442297;1allele=G/A;version=Hapmap2;RS=rs277673149;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	1846914	1847013	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:1533908;1allele=-/T;version=Hapmap1;RS=rs131471999;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	1852821	1852920	.	+	.	Name=Days_to_silk;B73v2_pos=5:1539815;1allele=A/G;version=Hapmap1;RS=rs131472042;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	1861432	1861531	.	+	.	Name=Days_to_silk;B73v2_pos=5:1547999;1allele=G/A;version=Hapmap1;RS=rs131472120;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	1882341	1882440	.	+	.	Name=Plant_height;B73v2_pos=5:1570307;1allele=G/A;version=Hapmap2;RS=rs724394734;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	1932167	1932266	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:1617324;1allele=T/C;version=Hapmap2;RS=rs277673682;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	1967299	1967398	.	+	.	Name=Nitrate;B73v2_pos=1:258105406;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	1988357	1988456	.	+	.	Name=Days_to_silk;B73v2_pos=5:1678216;1allele=C/T;version=Hapmap2;RS=rs131182682;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2025578	2025677	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:1715896;1allele=T/C;version=Hapmap1;RS=rs131472476;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2039870	2039969	.	+	.	Name=Days_to_silk;B73v2_pos=5:1730188;1allele=CTGCAA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	2040156	2040255	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1730474;1allele=T/G;version=Hapmap2;RS=rs824810468;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2081764	2081863	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1759662;1allele=C/T;version=Hapmap2;RS=rs812202829;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2081914	2082013	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1759812;1allele=A/C;version=Hapmap2;RS=rs848029498;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	2147637	2147736	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:1838505;1allele=G/A;version=Hapmap1;RS=rs129974679;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2156554	2156653	.	+	.	Name=Days_to_silk;B73v2_pos=5:1847423;1allele=T/A;version=Hapmap2;RS=rs836661134;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	2156918	2157017	.	+	.	Name=Glucose;B73v2_pos=5:1847787;1allele=C/A;version=Hapmap2;RS=rs830182749;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	2159036	2159135	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:1849905;1allele=G/A;version=Hapmap2;RS=rs277674171;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2159036	2159135	.	+	.	Name=Glucose;B73v2_pos=5:1849905;1allele=G/A;version=Hapmap2;RS=rs277674171;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2160385	2160484	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1851254;1allele=G/A;version=Hapmap2;RS=rs129974772;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2160767	2160866	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1851636;1allele=T/G;version=Hapmap2;RS=rs726479521;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	2161860	2161959	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1852729;1allele=G/T;version=Hapmap1;RS=rs131472753;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2174971	2175070	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1866248;1allele=C/A;version=Hapmap1;RS=rs131472760;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	2175807	2175906	.	+	.	Name=Glucose;B73v2_pos=5:1867084;1allele=A/C;version=Hapmap2;RS=rs277674194;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	2175807	2175906	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:1867084;1allele=A/C;version=Hapmap2;RS=rs277674194;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	2176164	2176263	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1867441;1allele=A/G;version=Hapmap2;RS=rs129974796;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2188377	2188476	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:1879654;1allele=G/A;version=Hapmap2;RS=rs131472840;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2190710	2190809	.	+	.	Name=Glucose;B73v2_pos=5:1881987;1allele=T/C;version=Hapmap2;RS=rs131472846;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2193383	2193482	.	+	.	Name=Glucose;B73v2_pos=5:1884659;1allele=C/T;version=Hapmap2;RS=rs727442669;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2202622	2202721	.	+	.	Name=Glucose;B73v2_pos=5:1893898;1allele=A/T;version=Hapmap2;RS=rs847682628;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	2205022	2205121	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1896298;1allele=T/C;version=Hapmap2;RS=rs840835274;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2208633	2208732	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1899909;1allele=G/T;version=Hapmap2;RS=rs129974959;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	2238147	2238246	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:1945335;1allele=C/T;version=Hapmap2;RS=rs844204361;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2252079	2252178	.	+	.	Name=Ear_row_number;B73v2_pos=5:1959267;1allele=G/T;version=Hapmap2;RS=rs129975191;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2338486	2338585	.	+	.	Name=Total_amino_acids;B73v2_pos=5:1993909;1allele=A/G;version=Hapmap2;RS=rs724809751;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2355676	2355775	.	+	.	Name=Total_amino_acids;B73v2_pos=5:2038524;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	2362122	2362221	.	+	.	Name=Total_amino_acids;B73v2_pos=5:2032078;1allele=C/T;version=Hapmap2;RS=rs726951312;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2408377	2408476	.	+	.	Name=Total_amino_acids;B73v2_pos=5:2104094;1allele=G/A;version=Hapmap2;RS=rs277674631;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2422173	2422272	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:2117890;1allele=T/C;version=Hapmap2;RS=rs129975529;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2435518	2435617	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:2131235;1allele=C/T;version=Hapmap2;RS=rs845021630;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2442408	2442507	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:2138125;1allele=T/C;version=Hapmap2;RS=rs131473261;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2447465	2447564	.	+	.	Name=Starch;B73v2_pos=5:2143182;1allele=C/T;version=Hapmap2;RS=rs277674779;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2472447	2472546	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:2188742;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	2480548	2480647	.	+	.	Name=Plant_height;B73v2_pos=5:2180641;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	2571896	2571995	.	+	.	Name=Starch;B73v2_pos=5:2257187;1allele=T/C;version=Hapmap1;RS=rs131473587;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2576927	2577026	.	+	.	Name=Days_to_silk;B73v2_pos=5:2262214;1allele=C/T;version=Hapmap2;RS=rs277675040;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2581024	2581123	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:2266311;1allele=C/T;version=Hapmap2;RS=rs844395382;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2604556	2604655	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:2289843;1allele=T/C;version=Hapmap1;RS=rs131473856;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2612722	2612821	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:2298010;1allele=G/A;version=Hapmap2;RS=rs811868308;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2613308	2613407	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:2298596;1allele=C/T;version=Hapmap2;RS=rs828897399;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2621722	2621821	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:2307010;1allele=C/T;version=Hapmap2;RS=rs836449311;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2624996	2625095	.	+	.	Name=Ear_height;B73v2_pos=5:2310284;1allele=T/C;version=Hapmap2;RS=rs801962032;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2625266	2625365	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:2310554;1allele=A/T;version=Hapmap2;RS=rs802801252;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2626941	2627040	.	+	.	Name=Glucose;B73v2_pos=5:2312229;1allele=TTGGG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	2636056	2636155	.	+	.	Name=Fructose;B73v2_pos=5:2321343;1allele=G/A;version=Hapmap2;RS=rs277675244;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2641540	2641639	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:2326827;1allele=/TACAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	2661281	2661380	.	+	.	Name=Glucose;B73v2_pos=5:2346130;1allele=T/G;version=Hapmap2;RS=rs841846744;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2661281	2661380	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2346130;1allele=T/G;version=Hapmap2;RS=rs841846744;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2668123	2668222	.	+	.	Name=Glucose;B73v2_pos=5:2352972;1allele=G/A;version=Hapmap2;RS=rs129976278;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2668777	2668876	.	+	.	Name=Glucose;B73v2_pos=5:2353626;1allele=T/C;version=Hapmap2;RS=rs129976288;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2668826	2668925	.	+	.	Name=Glucose;B73v2_pos=5:2353675;1allele=C/T;version=Hapmap2;RS=rs277675476;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2669750	2669849	.	+	.	Name=Glucose;B73v2_pos=5:2354599;1allele=G/T;version=Hapmap1;RS=rs726137109;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2679030	2679129	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:2363879;1allele=T/C;version=Hapmap2;RS=rs131474497;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2681042	2681141	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:2365891;1allele=T/G;version=Hapmap2;RS=rs801711897;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2703298	2703397	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2388147;1allele=C/A;version=Hapmap2;RS=rs816921395;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	2703346	2703445	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2388195;1allele=T/C;version=Hapmap2;RS=rs277675601;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2715597	2715696	.	+	.	Name=Starch;B73v2_pos=5:2400447;1allele=G/A;version=Hapmap1;RS=rs131474580;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	2724096	2724195	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:2417238;1allele=G/A;version=Hapmap2;RS=rs277675717;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2724139	2724238	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:2417281;1allele=C/T;version=Hapmap2;RS=rs129976597;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2725637	2725736	.	+	.	Name=Glucose;B73v2_pos=5:2418779;1allele=G/A;version=Hapmap2;RS=rs1064552988;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2725637	2725736	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:2418779;1allele=G/A;version=Hapmap2;RS=rs1064552988;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2818413	2818512	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2497553;1allele=A/G;version=Hapmap2;RS=rs277675803;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2818416	2818515	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2497556;1allele=C/T;version=Hapmap2;RS=rs277675804;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2839662	2839761	.	+	.	Name=Glucose;B73v2_pos=5:2518912;1allele=C/T;version=Hapmap2;RS=rs824941491;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2839808	2839907	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2519058;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	2840634	2840733	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2519884;1allele=C/T;version=Hapmap2;RS=rs277675807;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2840751	2840850	.	+	.	Name=Glucose;B73v2_pos=5:2520001;1allele=G/A;version=Hapmap2;RS=rs848870756;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2843237	2843336	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:2522487;1allele=G/A;version=Hapmap2;RS=rs131474754;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	2900723	2900822	.	+	.	Name=Days_to_silk;B73v2_pos=5:2580182;1allele=G/A;version=Hapmap2;RS=rs131474910;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2900948	2901047	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2580407;1allele=T/C;version=Hapmap2;RS=rs277675918;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	2915225	2915324	.	+	.	Name=Total_amino_acids;B73v2_pos=5:2594684;1allele=C/T;version=Hapmap2;RS=rs129976844;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2925344	2925443	.	+	.	Name=Total_amino_acids;B73v2_pos=5:2604805;1allele=T/C;version=Hapmap1;RS=rs129976859;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2925435	2925534	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2604896;1allele=C/T;version=Hapmap2;RS=rs131475010;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	2925634	2925733	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2605095;1allele=A/G;version=Hapmap2;RS=rs131475017;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	2926878	2926977	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2606736;1allele=G/A;version=Hapmap2;RS=rs277675963;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3012607	3012706	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:2702226;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3067213	3067312	.	+	.	Name=Days_to_silk;B73v2_pos=5:2750389;1allele=G/T;version=Hapmap2;RS=rs129976951;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	3080885	3080984	.	+	.	Name=Days_to_silk;B73v2_pos=5:2764061;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3102502	3102601	.	+	.	Name=Glucose;B73v2_pos=5:2785674;1allele=C/T;version=Hapmap1;RS=rs131475245;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	3107016	3107115	.	+	.	Name=Days_to_silk;B73v2_pos=5:2790188;1allele=C/A;version=Hapmap2;RS=rs726491267;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	3116827	3116926	.	+	.	Name=Days_to_silk;B73v2_pos=5:2799999;1allele=A/C;version=Hapmap2;RS=rs818730322;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	3124673	3124772	.	+	.	Name=Glucose;B73v2_pos=5:2807844;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3220035	3220134	.	+	.	Name=Leaf_length;B73v2_pos=5:2924999;1allele=G/A;version=Hapmap2;RS=rs277676427;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	3220038	3220137	.	+	.	Name=Leaf_length;B73v2_pos=5:2925002;1allele=A/G;version=Hapmap2;RS=rs811362600;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3221940	3222039	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:2926904;1allele=C/T;version=Hapmap2;RS=rs131475570;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3295311	3295410	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3002355;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3329371	3329470	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3038515;1allele=T/C;version=Hapmap1;RS=rs131475595;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3343929	3344028	.	+	.	Name=Leaf_length;B73v2_pos=5:3053073;1allele=C/T;version=Hapmap2;RS=rs277676549;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3346504	3346603	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3055648;1allele=G/A;version=Hapmap2;RS=rs129977479;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	3347908	3348007	.	+	.	Name=Leaf_length;B73v2_pos=5:3057052;1allele=G/A;version=Hapmap2;RS=rs725236732;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	3348890	3348989	.	+	.	Name=Leaf_length;B73v2_pos=5:3058034;1allele=A/G;version=Hapmap2;RS=rs277676587;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3350495	3350594	.	+	.	Name=Leaf_length;B73v2_pos=5:3059639;1allele=A/C;version=Hapmap1;RS=rs131475649;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3350721	3350820	.	+	.	Name=Leaf_length;B73v2_pos=5:3059865;1allele=C/T;version=Hapmap2;RS=rs277676602;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3413058	3413157	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:3105763;1allele=C/G;version=Hapmap1;RS=rs131475690;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	3488514	3488613	.	+	.	Name=Leaf_length;B73v2_pos=5:3206054;1allele=T/C;version=Hapmap2;RS=rs129977938;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3492427	3492526	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:3209967;1allele=C/T;version=Hapmap2;RS=rs277677036;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3603602	3603701	.	+	.	Name=Leaf_length;B73v2_pos=5:3323842;1allele=C/T;version=Hapmap2;RS=rs277677196;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3606817	3606916	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:3327057;1allele=C/G;version=Hapmap2;RS=rs838113845;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	3614286	3614385	.	+	.	Name=Glucose;B73v2_pos=5:3334526;1allele=G/A;version=Hapmap2;RS=rs131476163;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	3614497	3614596	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3334737;1allele=C/A;version=Hapmap2;RS=rs131476168;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3617601	3617700	.	+	.	Name=Cob_diameter;B73v2_pos=5:3337841;1allele=C/T;version=Hapmap2;RS=rs277677286;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3623902	3624001	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3343992;1allele=G/A;version=Hapmap2;RS=rs727217130;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3625361	3625460	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3345451;1allele=C/T;version=Hapmap2;RS=rs1063422348;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3668064	3668144	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:3407321;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3683374	3683473	.	+	.	Name=Glucose;B73v2_pos=5:3422651;1allele=C/T;version=Hapmap2;RS=rs131476456;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3683711	3683810	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3422988;1allele=C/G;version=Hapmap2;RS=rs277677727;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	3691405	3691504	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3430682;1allele=T/C;version=Hapmap2;RS=rs845613239;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3732107	3732206	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:3498888;1allele=G/T;version=Hapmap2;RS=rs812096591;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	3734974	3735073	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:3501755;1allele=G/A;version=Hapmap2;RS=rs839713187;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3735187	3735286	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3501968;1allele=C/T;version=Hapmap2;RS=rs806619705;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3736060	3736159	.	+	.	Name=Leaf_length;B73v2_pos=5:3502841;1allele=T/C;version=Hapmap2;RS=rs131476776;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3736389	3736488	.	+	.	Name=Leaf_length;B73v2_pos=5:3503170;1allele=C/T;version=Hapmap2;RS=rs277677921;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3738589	3738688	.	+	.	Name=Leaf_length;B73v2_pos=5:3505370;1allele=T/C;version=Hapmap2;RS=rs131476780;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3739401	3739500	.	+	.	Name=Leaf_length;B73v2_pos=5:3506182;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3781905	3782004	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3484926;1allele=C/T;version=Hapmap2;RS=rs129978278;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3782400	3782499	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3485421;1allele=T/G;version=Hapmap2;RS=rs277677882;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	3803557	3803656	.	+	.	Name=Leaf_length;B73v2_pos=5:3533478;1allele=G/A;version=Hapmap2;RS=rs131476830;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	3805823	3805922	.	+	.	Name=Malate;B73v2_pos=5:3535744;1allele=G/A;version=Hapmap2;RS=rs129978395;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	3810174	3810273	.	+	.	Name=Leaf_length;B73v2_pos=5:3540095;1allele=A/C;version=Hapmap2;RS=rs826385045;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	3816718	3816817	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:3546639;1allele=T/A;version=Hapmap2;RS=rs129978490;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	3816923	3817022	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:3546844;1allele=A/G;version=Hapmap2;RS=rs277678054;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3816981	3817080	.	+	.	Name=Leaf_length;B73v2_pos=5:3546902;1allele=T/C;version=Hapmap2;RS=rs847599134;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3822680	3822779	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3552601;1allele=T/C;version=Hapmap2;RS=rs131476974;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	3878770	3878869	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:3601294;1allele=/GCGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3930489	3930588	.	+	.	Name=Days_to_silk;B73v2_pos=5:3640445;1allele=G/T;version=Hapmap2;RS=rs277678162;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	3930659	3930758	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:3640615;1allele=C/T;version=Hapmap2;RS=rs805701646;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	3954892	3954991	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3664760;1allele=G/C;version=Hapmap2;RS=rs819604736;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	3954968	3955067	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3664836;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3955014	3955113	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3664882;1allele=A/G;version=Hapmap2;RS=rs277678213;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	3955686	3955785	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3665554;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	3957466	3957565	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3667334;1allele=T/C;version=Hapmap2;RS=rs131477116;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	4018691	4018790	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:3728602;1allele=C/T;version=Hapmap2;RS=rs277678371;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	4019986	4020085	.	+	.	Name=Leaf_length;B73v2_pos=5:3729892;1allele=G/A;version=Hapmap2;RS=rs836154224;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	4022723	4022822	.	+	.	Name=Leaf_length;B73v2_pos=5:3732629;1allele=A/T;version=Hapmap2;RS=rs1063857310;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	4072612	4072711	.	+	.	Name=Leaf_length;B73v2_pos=5:3782474;1allele=G/A;version=Hapmap2;RS=rs828237615;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	4077220	4077319	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:3787082;1allele=A/G;version=Hapmap2;RS=rs277678533;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	4077937	4078036	.	+	.	Name=Malate;B73v2_pos=5:3787799;1allele=C/G;version=Hapmap2;RS=rs844777100;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	4124797	4124896	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:3835176;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	4233965	4234064	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:3948104;1allele=G/T;version=Hapmap2;RS=rs129979281;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	4238413	4238512	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:3952552;1allele=T/C;version=Hapmap1;RS=rs131477641;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	4238413	4238512	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:3952552;1allele=T/C;version=Hapmap2;RS=rs131477641;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	4264738	4264837	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:3979925;1allele=A/C;version=Hapmap1;RS=rs131477692;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	4277747	4277846	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:3992933;1allele=A/G;version=Hapmap2;RS=rs838372949;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	4281420	4281519	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:3996607;1allele=T/C;version=Hapmap2;RS=rs725496781;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	4282052	4282151	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:3997239;1allele=T/C;version=Hapmap2;RS=rs724187391;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	4300807	4300906	.	+	.	Name=Cob_diameter;B73v2_pos=5:4015994;1allele=T/A;version=Hapmap2;RS=rs820194127;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	4488718	4488817	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:4200052;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	4489076	4489175	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4199694;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	4497016	4497115	.	+	.	Name=Glucose;B73v2_pos=5:4209228;1allele=C/T;version=Hapmap2;RS=rs813324009;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	4610321	4610420	.	+	.	Name=Leaf_width;B73v2_pos=5:4323497;1allele=C/G;version=Hapmap2;RS=rs129980352;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	4637640	4637739	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4350810;1allele=C/G;version=Hapmap2;RS=rs842040435;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	4758500	4758599	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:4471634;1allele=A/G;version=Hapmap1;RS=rs131478800;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	4759823	4759922	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4472957;1allele=C/T;version=Hapmap2;RS=rs845522671;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	4761343	4761442	.	+	.	Name=Ear_height;B73v2_pos=5:4474477;1allele=T/G;version=Hapmap2;RS=rs802599531;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	4768408	4768507	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:4481542;1allele=T/C;version=Hapmap2;RS=rs849131988;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	4872239	4872338	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:4585389;1allele=C/T;version=Hapmap2;RS=rs727334967;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	4874444	4874543	.	+	.	Name=Cob_diameter;B73v2_pos=5:4587594;1allele=/AC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	4882200	4882299	.	+	.	Name=Leaf_width;B73v2_pos=5:4603658;1allele=A/T;version=Hapmap2;RS=rs819579227;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	4884336	4884435	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4605794;1allele=C/-;version=Hapmap1;RS=rs131479284;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	4884387	4884486	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4605845;1allele=C/T;version=Hapmap1;RS=rs829655070;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	4884536	4884635	.	+	.	Name=Total_amino_acids;B73v2_pos=5:4605994;1allele=C/A;version=Hapmap1;RS=rs131479293;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	4965989	4966088	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4673834;1allele=A/C;version=Hapmap2;RS=rs131479740;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	4970032	4970131	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:4677877;1allele=G/T;version=Hapmap2;RS=rs129981609;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	4981879	4981978	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:4689724;1allele=C/T;version=Hapmap2;RS=rs129981665;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5031061	5031160	.	+	.	Name=Leaf_width;B73v2_pos=5:4738908;1allele=C/A;version=Hapmap2;RS=rs1062034802;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	5036596	5036695	.	+	.	Name=Tassel_length;B73v2_pos=5:4744443;1allele=T/C;version=Hapmap2;RS=rs129981710;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5064370	5064469	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4772217;1allele=C/T;version=Hapmap2;RS=rs830844815;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	5068645	5068744	.	+	.	Name=Leaf_width;B73v2_pos=5:4776492;1allele=G/C;version=Hapmap2;RS=rs824633443;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	5166964	5167063	.	+	.	Name=Leaf_width;B73v2_pos=5:4872438;1allele=T/C;version=Hapmap2;RS=rs844461292;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	5171904	5172003	.	+	.	Name=Stalk_strength;B73v2_pos=5:4877375;1allele=G/A;version=Hapmap2;RS=rs817562555;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	5221659	5221758	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4909610;1allele=A/G;version=Hapmap1;RS=rs131480307;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	5221894	5221993	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:4909845;1allele=C/T;version=Hapmap2;RS=rs810359320;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	5234076	5234175	.	+	.	Name=Leaf_width;B73v2_pos=5:4922400;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	5277420	5277519	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:4970460;1allele=C/T;version=Hapmap2;RS=rs131480356;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5283573	5283672	.	+	.	Name=Ear_row_number;B73v2_pos=5:4976609;1allele=A/G;version=Hapmap2;RS=rs817850592;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	5313305	5313404	.	+	.	Name=Total_amino_acids;B73v2_pos=5:5006343;1allele=A/G;version=Hapmap2;RS=rs823327404;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	5372159	5372258	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:5065310;1allele=/GTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	5507599	5507698	.	+	.	Name=Leaf_width;B73v2_pos=5:5199838;1allele=T/C;version=Hapmap2;RS=rs131480818;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5592946	5593045	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:5284228;1allele=G/A;version=Hapmap2;RS=rs802654215;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	5685566	5685665	.	+	.	Name=Leaf_width;B73v2_pos=5:5378392;1allele=G/A;version=Hapmap2;RS=rs832619477;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	5744766	5744865	.	+	.	Name=Tassel_length;B73v2_pos=5:5436385;1allele=G/A;version=Hapmap2;RS=rs277682380;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	5745578	5745677	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:5437197;1allele=G/C;version=Hapmap2;RS=rs828800321;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	5746077	5746176	.	+	.	Name=Tassel_length;B73v2_pos=5:5437696;1allele=G/T;version=Hapmap2;RS=rs842949167;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	5746910	5747009	.	+	.	Name=Tassel_length;B73v2_pos=5:5438529;1allele=A/T;version=Hapmap2;RS=rs849065968;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	5748208	5748307	.	+	.	Name=Tassel_length;B73v2_pos=5:5440043;1allele=A/T;version=Hapmap2;RS=rs835146206;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	5858646	5858745	.	+	.	Name=Tassel_length;B73v2_pos=5:5490392;1allele=T/C;version=Hapmap2;RS=rs841168577;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5860239	5860338	.	+	.	Name=Tassel_length;B73v2_pos=5:5491985;1allele=A/G;version=Hapmap2;RS=rs844552530;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	5864954	5865053	.	+	.	Name=Tassel_length;B73v2_pos=5:5496700;1allele=A/T;version=Hapmap2;RS=rs821055664;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	5868330	5868429	.	+	.	Name=Leaf_width;B73v2_pos=5:5500076;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	5907693	5907792	.	+	.	Name=Tassel_length;B73v2_pos=5:5543756;1allele=C/T;version=Hapmap2;RS=rs826245600;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5911901	5912000	.	+	.	Name=Tassel_length;B73v2_pos=5:5547964;1allele=G/A;version=Hapmap2;RS=rs131481454;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	5911932	5912031	.	+	.	Name=Tassel_length;B73v2_pos=5:5547995;1allele=T/C;version=Hapmap2;RS=rs131481457;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5914000	5914099	.	+	.	Name=Tassel_length;B73v2_pos=5:5550063;1allele=G/A;version=Hapmap2;RS=rs848260659;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	5917622	5917721	.	+	.	Name=Leaf_width;B73v2_pos=5:5553685;1allele=C/T;version=Hapmap2;RS=rs809781067;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	5937301	5937400	.	+	.	Name=Leaf_width;B73v2_pos=5:5573364;1allele=G/C;version=Hapmap2;RS=rs131481554;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	5942565	5942664	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:5578628;1allele=G/A;version=Hapmap2;RS=rs131481605;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	6060407	6060506	.	+	.	Name=Leaf_width;B73v2_pos=5:5687948;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	6116263	6116362	.	+	.	Name=Tassel_length;B73v2_pos=5:5749279;1allele=C/T;version=Hapmap2;RS=rs129982765;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	6144265	6144364	.	+	.	Name=Leaf_width;B73v2_pos=5:5777283;1allele=C/G;version=Hapmap2;RS=rs832176861;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	6159095	6159194	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:5792119;1allele=G/C;version=Hapmap2;RS=rs277682844;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	6283295	6283394	.	+	.	Name=Nitrate;B73v2_pos=5:5911369;1allele=-/+;version=Hapmap2;RS=rs823790616;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	6372140	6372239	.	+	.	Name=Stalk_strength;B73v2_pos=5:5927545;1allele=G/T;version=Hapmap2;RS=rs829900216;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	6476073	6476172	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:6031515;1allele=T/C;version=Hapmap2;RS=rs805237772;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	6525711	6525810	.	+	.	Name=Stalk_strength;B73v2_pos=5:6108723;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	6531384	6531483	.	+	.	Name=Leaf_width;B73v2_pos=5:6114403;1allele=T/A;version=Hapmap2;RS=rs277683409;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	6569784	6569883	.	+	.	Name=Nitrate;B73v2_pos=5:6123831;1allele=G/A;version=Hapmap2;RS=rs810684688;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	6579412	6579511	.	+	.	Name=Leaf_width;B73v2_pos=5:6133460;1allele=C/T;version=Hapmap2;RS=rs277683463;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	6673570	6673669	.	+	.	Name=Leaf_width;B73v2_pos=5:6232690;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	6732137	6732236	.	+	.	Name=Ear_row_number;B73v2_pos=5:6278237;1allele=T/C;version=Hapmap2;RS=rs131483059;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	6758280	6758379	.	+	.	Name=Leaf_width;B73v2_pos=5:6304977;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	6758362	6758461	.	+	.	Name=Leaf_width;B73v2_pos=5:6305059;1allele=G/C;version=Hapmap1;RS=rs131483087;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	6758582	6758681	.	+	.	Name=Leaf_width;B73v2_pos=5:6305279;1allele=C/T;version=Hapmap2;RS=rs131483099;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	6758701	6758800	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6305398;1allele=T/A;version=Hapmap1;RS=rs129983340;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	6772351	6772450	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:6318970;1allele=C/G;version=Hapmap2;RS=rs725030540;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	6785721	6785820	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:6332340;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	6787038	6787137	.	+	.	Name=Height_above_ear;B73v2_pos=5:6333657;1allele=/TTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	6787141	6787240	.	+	.	Name=Plant_height;B73v2_pos=5:6333760;1allele=T/G;version=Hapmap2;RS=rs129983417;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	6791822	6791921	.	+	.	Name=Ear_row_number;B73v2_pos=5:6338439;1allele=G/A;version=Hapmap2;RS=rs277683754;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	6792113	6792212	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:6338730;1allele=T/C;version=Hapmap2;RS=rs802258660;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	6828582	6828681	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6376660;1allele=C/T;version=Hapmap2;RS=rs724888491;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	6859721	6859820	.	+	.	Name=Tassel_length;B73v2_pos=5:6403547;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	6883996	6884095	.	+	.	Name=Plant_height;B73v2_pos=5:6428240;1allele=C/T;version=Hapmap2;RS=rs131483550;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	6901209	6901308	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6445453;1allele=G/T;version=Hapmap1;RS=rs131483834;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	6901444	6901543	.	+	.	Name=Tassel_length;B73v2_pos=5:6445688;1allele=A/G;version=Hapmap2;RS=rs725461608;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	6962921	6963020	.	+	.	Name=Tassel_length;B73v2_pos=5:6543291;1allele=A/G;version=Hapmap2;RS=rs843168441;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	6962942	6963041	.	+	.	Name=Tassel_length;B73v2_pos=5:6543312;1allele=-/+;version=Hapmap2;RS=rs835481365;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7085790	7085889	.	+	.	Name=Leaf_width;B73v2_pos=5:6611117;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7085923	7086022	.	+	.	Name=Tassel_length;B73v2_pos=5:6610984;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7089120	7089219	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:6607787;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7089193	7089292	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6607714;1allele=/CCCTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7089193	7089292	.	+	.	Name=Plant_height;B73v2_pos=5:6607714;1allele=/CCCTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7089193	7089292	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:6607714;1allele=/CCCTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7089221	7089320	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:6607686;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7089221	7089320	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6607686;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7107459	7107558	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:6663115;1allele=T/A;version=Hapmap2;RS=rs807521288;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	7126155	7126254	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:6681809;1allele=C/T;version=Hapmap2;RS=rs837303533;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7130708	7130807	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6686362;1allele=A/G;version=Hapmap2;RS=rs131484236;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	7130746	7130845	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:6686400;1allele=C/A;version=Hapmap1;RS=rs131484234;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	7130797	7130896	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:6686451;1allele=A/C;version=Hapmap1;RS=rs131484232;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	7131837	7131936	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6687491;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7135352	7135451	.	+	.	Name=Plant_height;B73v2_pos=5:6691006;1allele=T/G;version=Hapmap1;RS=rs131484200;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	7247032	7247131	.	+	.	Name=Height_above_ear;B73v2_pos=5:6778901;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7277673	7277772	.	+	.	Name=Height_above_ear;B73v2_pos=5:6810131;1allele=T/C;version=Hapmap2;RS=rs277684563;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7279241	7279340	.	+	.	Name=Height_above_ear;B73v2_pos=5:6811699;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7296899	7296998	.	+	.	Name=Height_above_ear;B73v2_pos=5:6829542;1allele=T/C;version=Hapmap2;RS=rs129984157;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7298352	7298451	.	+	.	Name=Height_above_ear;B73v2_pos=5:6830995;1allele=C/T;version=Hapmap1;RS=rs131484417;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7322549	7322648	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6866160;1allele=A/G;version=Hapmap2;RS=rs277684687;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	7322773	7322872	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6866384;1allele=A/G;version=Hapmap2;RS=rs850253259;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	7322982	7323081	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6866593;1allele=C/G;version=Hapmap2;RS=rs277684693;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	7326110	7326209	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6869721;1allele=G/A;version=Hapmap2;RS=rs850096349;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	7326361	7326460	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6869972;1allele=A/G;version=Hapmap2;RS=rs811019698;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	7327204	7327303	.	+	.	Name=Height_above_ear;B73v2_pos=5:6870815;1allele=T/C;version=Hapmap2;RS=rs129984248;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7330771	7330870	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6874382;1allele=A/G;version=Hapmap1;RS=rs131484492;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	7331242	7331341	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6874853;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7332433	7332531	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6876044;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7333683	7333782	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6877295;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7339511	7339610	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:6883125;1allele=C/T;version=Hapmap1;RS=rs131484521;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7339939	7340038	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6883553;1allele=T/A;version=Hapmap2;RS=rs277684760;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	7339943	7340042	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6883557;1allele=C/T;version=Hapmap2;RS=rs277684761;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7361955	7362054	.	+	.	Name=Height_above_ear;B73v2_pos=5:6905575;1allele=C/T;version=Hapmap2;RS=rs129984333;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7362073	7362172	.	+	.	Name=Plant_height;B73v2_pos=5:6905693;1allele=C/G;version=Hapmap2;RS=rs277684782;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	7362364	7362463	.	+	.	Name=Height_above_ear;B73v2_pos=5:6905984;1allele=/TCCCAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7362364	7362463	.	+	.	Name=Leaf_width;B73v2_pos=5:6905984;1allele=/TCCCAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7362465	7362564	.	+	.	Name=Leaf_width;B73v2_pos=5:6906085;1allele=A/G;version=Hapmap1;RS=rs131484568;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	7363144	7363243	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6906764;1allele=C/T;version=Hapmap2;RS=rs131484584;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7363471	7363570	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6907091;1allele=C/A;version=Hapmap2;RS=rs727152862;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	7363689	7363788	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6907309;1allele=T/G;version=Hapmap2;RS=rs724238950;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	7363690	7363789	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6907310;1allele=T/C;version=Hapmap2;RS=rs725815499;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7363767	7363866	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6907387;1allele=A/G;version=Hapmap2;RS=rs129984357;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	7364916	7365015	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6908536;1allele=A/T;version=Hapmap2;RS=rs839736583;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	7366395	7366494	.	+	.	Name=Tassel_length;B73v2_pos=5:6910015;1allele=C/A;version=Hapmap2;RS=rs843805411;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	7369117	7369216	.	+	.	Name=Stalk_strength;B73v2_pos=5:6912737;1allele=G/A;version=Hapmap1;RS=rs131484600;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	7370165	7370264	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:6913785;1allele=C/A;version=Hapmap1;RS=rs131484607;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	7373813	7373912	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:6917433;1allele=C/A;version=Hapmap1;RS=rs131484631;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7373813	7373912	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:6917433;1allele=C/A;version=Hapmap1;RS=rs131484631;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7374320	7374419	.	+	.	Name=Ear_row_number;B73v2_pos=5:6917940;1allele=T/A;version=Hapmap2;RS=rs833244035;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	7376645	7376744	.	+	.	Name=Nitrate;B73v2_pos=5:6920265;1allele=C/A;version=Hapmap2;RS=rs825536077;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	7380932	7381031	.	+	.	Name=Height_above_ear;B73v2_pos=5:6924552;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7381288	7381387	.	+	.	Name=Height_above_ear;B73v2_pos=5:6924908;1allele=T/G;version=Hapmap2;RS=rs1062262005;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	7393547	7393646	.	+	.	Name=Ear_row_number;B73v2_pos=5:6942059;1allele=A/C;version=Hapmap2;RS=rs805714023;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	7477458	7477557	.	+	.	Name=Nitrate;B73v2_pos=5:7040846;1allele=G/C;version=Hapmap2;RS=rs836579630;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	7571836	7571935	.	+	.	Name=Nitrate;B73v2_pos=5:7135417;1allele=C/T;version=Hapmap2;RS=rs825755060;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7575052	7575151	.	+	.	Name=Tassel_length;B73v2_pos=5:7138634;1allele=C/T;version=Hapmap2;RS=rs848175284;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7575902	7576001	.	+	.	Name=Tassel_length;B73v2_pos=5:7139484;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7665600	7665699	.	+	.	Name=Nitrate;B73v2_pos=5:7220440;1allele=T/C;version=Hapmap2;RS=rs811764115;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7689232	7689331	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:7244073;1allele=G/A;version=Hapmap1;RS=rs131485081;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	7695524	7695623	.	+	.	Name=Ear_row_number;B73v2_pos=5:7250365;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7701103	7701202	.	+	.	Name=Height_above_ear;B73v2_pos=5:7255944;1allele=T/G;version=Hapmap1;RS=rs131485136;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	7704305	7704404	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:7259146;1allele=T/C;version=Hapmap2;RS=rs815447904;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7704338	7704437	.	+	.	Name=Height_above_ear;B73v2_pos=5:7259179;1allele=A/C;version=Hapmap2;RS=rs277685446;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	7709012	7709111	.	+	.	Name=Height_above_ear;B73v2_pos=5:7263853;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7730754	7730853	.	+	.	Name=Stalk_strength;B73v2_pos=5:7285596;1allele=T/A;version=Hapmap2;RS=rs129985282;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	7730793	7730892	.	+	.	Name=Stalk_strength;B73v2_pos=5:7285635;1allele=C/T;version=Hapmap2;RS=rs810345999;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	7734136	7734235	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7288976;1allele=A/T;version=Hapmap2;RS=rs129985292;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	7736124	7736223	.	+	.	Name=Height_above_ear;B73v2_pos=5:7290964;1allele=G/C;version=Hapmap1;RS=rs129985303;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	7736170	7736269	.	+	.	Name=Height_above_ear;B73v2_pos=5:7291010;1allele=T/C;version=Hapmap2;RS=rs727165372;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7736170	7736269	.	+	.	Name=Plant_height;B73v2_pos=5:7291010;1allele=T/C;version=Hapmap2;RS=rs727165372;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	7803472	7803571	.	+	.	Name=Height_above_ear;B73v2_pos=5:7365239;1allele=G/A;version=Hapmap2;RS=rs725729624;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	7819097	7819196	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:7381227;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7819097	7819196	.	+	.	Name=Plant_height;B73v2_pos=5:7381227;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7823533	7823632	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:7385663;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7858178	7858277	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7412400;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7874910	7875009	.	+	.	Name=Height_above_ear;B73v2_pos=5:7430046;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7874997	7875096	.	+	.	Name=Height_above_ear;B73v2_pos=5:7430133;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7875328	7875427	.	+	.	Name=Plant_height;B73v2_pos=5:7430464;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7893942	7894041	.	+	.	Name=Height_above_ear;B73v2_pos=5:7457575;1allele=C/A;version=Hapmap2;RS=rs129985506;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	7986172	7986271	.	+	.	Name=Glucose;B73v2_pos=5:7516934;1allele=T/G;version=Hapmap2;RS=rs819946936;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	7986540	7986639	.	+	.	Name=Height_above_ear;B73v2_pos=5:7517302;1allele=C/G;version=Hapmap2;RS=rs849709460;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	7988062	7988161	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:7518824;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	7988095	7988194	.	+	.	Name=Height_above_ear;B73v2_pos=5:7518857;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	8001802	8001901	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:7532564;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	8021076	8021175	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7625373;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	8079801	8079900	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7573549;1allele=C/A;version=Hapmap1;RS=rs131485683;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	8080898	8080997	.	+	.	Name=Nitrate;B73v2_pos=5:7574646;1allele=C/G;version=Hapmap1;RS=rs131485717;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	8081970	8082069	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7575718;1allele=C/G;version=Hapmap2;RS=rs724564127;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	8082224	8082323	.	+	.	Name=Glucose;B73v2_pos=5:7575972;1allele=C/A;version=Hapmap2;RS=rs131485734;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	8096757	8096856	.	+	.	Name=Plant_height;B73v2_pos=5:7590396;1allele=T/C;version=Hapmap2;RS=rs1064577983;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	8101414	8101513	.	+	.	Name=Height_above_ear;B73v2_pos=5:7595053;1allele=A/C;version=Hapmap1;RS=rs129985697;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8110489	8110588	.	+	.	Name=Plant_height;B73v2_pos=5:7604099;1allele=T/C;version=Hapmap1;RS=rs131485624;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8113376	8113475	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7606986;1allele=G/A;version=Hapmap2;RS=rs277686277;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8158875	8158974	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7689885;1allele=A/C;version=Hapmap2;RS=rs277686367;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	8158875	8158974	.	+	.	Name=Plant_height;B73v2_pos=5:7689885;1allele=A/C;version=Hapmap2;RS=rs277686367;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	8159094	8159193	.	+	.	Name=Glucose;B73v2_pos=5:7690104;1allele=T/C;version=Hapmap2;RS=rs814789726;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	8174926	8175025	.	+	.	Name=Glucose;B73v2_pos=5:7701588;1allele=T/C;version=Hapmap2;RS=rs843439950;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	8174929	8175028	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:7701591;1allele=G/A;version=Hapmap2;RS=rs1062754003;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8249230	8249329	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7775342;1allele=G/A;version=Hapmap2;RS=rs726929616;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8278048	8278147	.	+	.	Name=Glucose;B73v2_pos=5:7798029;1allele=C/T;version=Hapmap2;RS=rs802976449;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	8330483	8330582	.	+	.	Name=Malate;B73v2_pos=5:7854731;1allele=T/C;version=Hapmap2;RS=rs827478096;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	8515578	8515677	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7983655;1allele=C/G;version=Hapmap1;RS=rs832896807;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	8516780	8516879	.	+	.	Name=Plant_height;B73v2_pos=5:7984857;1allele=A/G;version=Hapmap2;RS=rs277686742;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8518714	8518813	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7986791;1allele=G/A;version=Hapmap2;RS=rs129986184;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	8518714	8518813	.	+	.	Name=Plant_height;B73v2_pos=5:7986791;1allele=A/G;version=Hapmap1;RS=rs129986184;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	8518765	8518864	.	+	.	Name=Plant_height;B73v2_pos=5:7986842;1allele=A/C;version=Hapmap2;RS=rs277686755;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	8528350	8528449	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:7996427;1allele=A/G;version=Hapmap2;RS=rs55626276;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8543149	8543248	.	+	.	Name=Ear_height;B73v2_pos=5:8011226;1allele=A/G;version=Hapmap2;RS=rs833843960;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8544155	8544254	.	+	.	Name=Plant_height;B73v2_pos=5:8012232;1allele=A/G;version=Hapmap2;RS=rs1060591444;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8548311	8548410	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:8016389;1allele=T/C;version=Hapmap2;RS=rs827867639;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	8585512	8585611	.	+	.	Name=Plant_height;B73v2_pos=5:8053151;1allele=G/A;version=Hapmap2;RS=rs277686810;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8629244	8629343	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:8100196;1allele=A/G;version=Hapmap2;RS=rs806960903;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8661146	8661245	.	+	.	Name=Plant_height;B73v2_pos=5:8132097;1allele=G/A;version=Hapmap2;RS=rs1063004700;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8692462	8692561	.	+	.	Name=Height_above_ear;B73v2_pos=5:8179598;1allele=T/G;version=Hapmap2;RS=rs129986634;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	8694291	8694390	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:8181427;1allele=G/C;version=Hapmap2;RS=rs823873555;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	8694533	8694632	.	+	.	Name=Height_above_ear;B73v2_pos=5:8181669;1allele=G/C;version=Hapmap2;RS=rs277686906;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	8694938	8695037	.	+	.	Name=Height_above_ear;B73v2_pos=5:8182074;1allele=A/G;version=Hapmap2;RS=rs129986674;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8697407	8697506	.	+	.	Name=Height_above_ear;B73v2_pos=5:8184546;1allele=C/T;version=Hapmap2;RS=rs129986701;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	8697470	8697569	.	+	.	Name=Height_above_ear;B73v2_pos=5:8184609;1allele=A/G;version=Hapmap2;RS=rs129986702;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8739149	8739248	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:8230811;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	8770934	8771033	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:8249313;1allele=G/A;version=Hapmap2;RS=rs830864645;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8789724	8789823	.	+	.	Name=Height_above_ear;B73v2_pos=5:8267995;1allele=A/G;version=Hapmap2;RS=rs277686976;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8791430	8791529	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:8281375;1allele=G/A;version=Hapmap2;RS=rs836484151;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	8845999	8846098	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:8330983;1allele=T/C;version=Hapmap1;RS=rs131486788;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	8880676	8880775	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:8365092;1allele=G/A;version=Hapmap2;RS=rs835580864;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8899112	8899211	.	+	.	Name=Plant_height;B73v2_pos=5:8383536;1allele=G/A;version=Hapmap2;RS=rs832380329;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	8927268	8927367	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:8411693;1allele=C/A;version=Hapmap2;RS=rs844178358;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	8940716	8940815	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:8425142;1allele=G/T;version=Hapmap2;RS=rs277687095;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	9026835	9026934	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:8507445;1allele=G/A;version=Hapmap2;RS=rs277687270;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	9034662	9034761	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:8515272;1allele=C/T;version=Hapmap2;RS=rs818173302;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	9037009	9037108	.	+	.	Name=Glucose;B73v2_pos=5:8517619;1allele=C/A;version=Hapmap2;RS=rs838975155;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	9057029	9057128	.	+	.	Name=Height_above_ear;B73v2_pos=5:8537640;1allele=A/G;version=Hapmap2;RS=rs1061735008;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	9064889	9064988	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:8545501;1allele=G/A;version=Hapmap2;RS=rs277687521;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	9068321	9068420	.	+	.	Name=Plant_height;B73v2_pos=5:8548930;1allele=A/G;version=Hapmap2;RS=rs277687586;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	9216339	9216438	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:8698823;1allele=T/C;version=Hapmap1;RS=rs277687822;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	9295218	9295317	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:8769373;1allele=T/A;version=Hapmap2;RS=rs844820589;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	9472576	9472675	.	+	.	Name=Ear_row_number;B73v2_pos=5:8952793;1allele=G/A;version=Hapmap2;RS=rs849749916;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	9554288	9554387	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:9037930;1allele=A/G;version=Hapmap2;RS=rs841180088;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	9576668	9576767	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:9060318;1allele=G/A;version=Hapmap2;RS=rs810625131;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	9751477	9751576	.	+	.	Name=Ear_row_number;B73v2_pos=5:9243292;1allele=C/T;version=Hapmap2;RS=rs277688203;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	9751754	9751853	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:9243569;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	9755200	9755299	.	+	.	Name=Ear_row_number;B73v2_pos=5:9247015;1allele=G/A;version=Hapmap2;RS=rs277688230;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	9768632	9768731	.	+	.	Name=Plant_height;B73v2_pos=5:9260447;1allele=A/G;version=Hapmap2;RS=rs277688241;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	9768632	9768731	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:9260447;1allele=A/G;version=Hapmap2;RS=rs277688241;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	9768632	9768731	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:9260447;1allele=A/G;version=Hapmap2;RS=rs277688241;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	9768632	9768731	.	+	.	Name=Ear_height;B73v2_pos=5:9260447;1allele=A/G;version=Hapmap2;RS=rs277688241;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	9768674	9768773	.	+	.	Name=Ear_row_number;B73v2_pos=5:9260489;1allele=T/C;version=Hapmap2;RS=rs817721914;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	9790496	9790595	.	+	.	Name=Ear_height;B73v2_pos=5:9282276;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	9838455	9838554	.	+	.	Name=Cob_diameter;B73v2_pos=5:9340981;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	9843956	9844055	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:9335478;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	9853362	9853461	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:9329199;1allele=T/C;version=Hapmap2;RS=rs131180783;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	9856186	9856285	.	+	.	Name=Ear_row_number;B73v2_pos=5:9332023;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	9900172	9900271	.	+	.	Name=Plant_height;B73v2_pos=5:9372394;1allele=T/G;version=Hapmap2;RS=rs131487803;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	9900287	9900386	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:9372509;1allele=A/G;version=Hapmap2;RS=rs277688323;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	9900287	9900386	.	+	.	Name=Plant_height;B73v2_pos=5:9372509;1allele=A/G;version=Hapmap2;RS=rs277688323;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	9906089	9906188	.	+	.	Name=Ear_row_number;B73v2_pos=5:9378311;1allele=C/T;version=Hapmap2;RS=rs845602434;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	9952203	9952302	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:9399255;1allele=A/T;version=Hapmap2;RS=rs131487838;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	9999898	9999997	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:9472350;1allele=A/T;version=Hapmap1;RS=rs131487851;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	10053238	10053337	.	+	.	Name=Glucose;B73v2_pos=5:9526078;1allele=C/T;version=Hapmap2;RS=rs277688488;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	10055558	10055657	.	+	.	Name=Plant_height;B73v2_pos=5:9528398;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10173201	10173300	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:9651251;1allele=A/G;version=Hapmap2;RS=rs840804469;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	10174071	10174170	.	+	.	Name=Height_above_ear;B73v2_pos=5:9652121;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10174384	10174483	.	+	.	Name=Height_above_ear;B73v2_pos=5:9652434;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10174574	10174673	.	+	.	Name=Plant_height;B73v2_pos=5:9652624;1allele=G/T;version=Hapmap2;RS=rs129988325;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	10174574	10174673	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:9652624;1allele=G/T;version=Hapmap2;RS=rs129988325;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	10204344	10204443	.	+	.	Name=Cob_diameter;B73v2_pos=5:9682395;1allele=T/C;version=Hapmap2;RS=rs849485840;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	10323264	10323363	.	+	.	Name=Height_above_ear;B73v2_pos=5:9805466;1allele=C/T;version=Hapmap2;RS=rs823900841;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	10333436	10333535	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:9815639;1allele=+/-;version=Hapmap2;RS=rs830281553;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	10335901	10336000	.	+	.	Name=Height_above_ear;B73v2_pos=5:9818104;1allele=G/A;version=Hapmap1;RS=rs131488572;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	10337237	10337336	.	+	.	Name=Plant_height;B73v2_pos=5:9819440;1allele=C/T;version=Hapmap2;RS=rs277688827;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	10337372	10337471	.	+	.	Name=Height_above_ear;B73v2_pos=5:9819575;1allele=A/C;version=Hapmap2;RS=rs277688830;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	10337372	10337471	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:9819575;1allele=A/C;version=Hapmap2;RS=rs277688830;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	10337675	10337774	.	+	.	Name=Plant_height;B73v2_pos=5:9819878;1allele=A/T;version=Hapmap2;RS=rs277688833;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	10430177	10430276	.	+	.	Name=Height_above_ear;B73v2_pos=5:9912132;1allele=T/C;version=Hapmap2;RS=rs1063868986;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	10469503	10469602	.	+	.	Name=Ear_row_number;B73v2_pos=5:9951459;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10469740	10469839	.	+	.	Name=Glucose;B73v2_pos=5:9951696;1allele=G/T;version=Hapmap2;RS=rs725647645;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	10517599	10517698	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:9999558;1allele=G/A;version=Hapmap2;RS=rs846123381;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	10519433	10519532	.	+	.	Name=Height_above_ear;B73v2_pos=5:10009640;1allele=A/G;version=Hapmap2;RS=rs129989123;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	10574772	10574871	.	+	.	Name=Fumarate;B73v2_pos=5:10081760;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10584617	10584716	.	+	.	Name=Fumarate;B73v2_pos=5:10091599;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10599661	10599760	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:10106617;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10626688	10626787	.	+	.	Name=Stalk_strength;B73v2_pos=5:10132885;1allele=-/+;version=Hapmap2;RS=rs838600296;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	10671609	10671708	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:10179215;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10715241	10715340	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:10222736;1allele=C/T;version=Hapmap2;RS=rs814994875;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	10719962	10720061	.	+	.	Name=Glutamate;B73v2_pos=5:10227442;1allele=G/A;version=Hapmap2;RS=rs802454761;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	10728791	10728890	.	+	.	Name=Stalk_strength;B73v2_pos=5:10236269;1allele=G/A;version=Hapmap2;RS=rs831617859;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	10816434	10816533	.	+	.	Name=Leaf_width;B73v2_pos=5:10315937;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10883645	10883744	.	+	.	Name=Glucose;B73v2_pos=5:10418961;1allele=A/G;version=Hapmap2;RS=rs131489896;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	10888086	10888185	.	+	.	Name=Leaf_width;B73v2_pos=5:10423404;1allele=A/C;version=Hapmap2;RS=rs277689828;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	10889174	10889273	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:10356768;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	10941938	10942037	.	+	.	Name=Leaf_width;B73v2_pos=5:10451616;1allele=G/A;version=Hapmap2;RS=rs1062565284;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	10956493	10956592	.	+	.	Name=Glucose;B73v2_pos=5:10466309;1allele=A/G;version=Hapmap2;RS=rs828659018;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	10985778	10985877	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:10493743;1allele=A/G;version=Hapmap2;RS=rs129989745;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	10985784	10985883	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:10493749;1allele=T/C;version=Hapmap2;RS=rs129989746;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	10985784	10985883	.	+	.	Name=Plant_height;B73v2_pos=5:10493749;1allele=T/C;version=Hapmap2;RS=rs129989746;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	10992161	10992260	.	+	.	Name=Tassel_length;B73v2_pos=5:10495548;1allele=C/G;version=Hapmap2;RS=rs822465762;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	10994618	10994717	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:10498005;1allele=C/T;version=Hapmap2;RS=rs840383201;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	11010215	11010314	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:10513136;1allele=G/C;version=Hapmap2;RS=rs822123356;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	11010761	11010860	.	+	.	Name=Plant_height;B73v2_pos=5:10513682;1allele=C/T;version=Hapmap2;RS=rs277689955;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	11011683	11011782	.	+	.	Name=Leaf_width;B73v2_pos=5:10514604;1allele=G/T;version=Hapmap2;RS=rs837293070;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	11026335	11026434	.	+	.	Name=Leaf_width;B73v2_pos=5:10529257;1allele=A/T;version=Hapmap2;RS=rs838313091;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	11039697	11039796	.	+	.	Name=Leaf_width;B73v2_pos=5:10542615;1allele=G/A;version=Hapmap2;RS=rs277690045;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	11042222	11042321	.	+	.	Name=Leaf_width;B73v2_pos=5:10545140;1allele=G/A;version=Hapmap2;RS=rs277690083;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	11071470	11071569	.	+	.	Name=Leaf_width;B73v2_pos=5:10552816;1allele=G/A;version=Hapmap2;RS=rs1061245930;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	11073421	11073520	.	+	.	Name=Leaf_width;B73v2_pos=5:10554767;1allele=C/T;version=Hapmap2;RS=rs822240763;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	11105801	11105900	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:10587148;1allele=G/C;version=Hapmap2;RS=rs811435320;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	11105846	11105945	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:10587193;1allele=A/G;version=Hapmap2;RS=rs822245530;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	11140122	11140220	.	+	.	Name=Nitrate;B73v2_pos=5:10647382;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	11152749	11152848	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:10620352;1allele=A/C;version=Hapmap1;RS=rs131490054;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	11180822	11180921	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:10672314;1allele=A/C;version=Hapmap2;RS=rs821972953;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	11190450	11190549	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:10681943;1allele=A/G;version=Hapmap2;RS=rs277690377;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	11197734	11197833	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:10688973;1allele=A/C;version=Hapmap2;RS=rs815703177;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	11230874	11230973	.	+	.	Name=Glucose;B73v2_pos=5:10722772;1allele=G/T;version=Hapmap2;RS=rs818932822;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	11230907	11231006	.	+	.	Name=Leaf_width;B73v2_pos=5:10722805;1allele=C/T;version=Hapmap2;RS=rs277690537;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	11286715	11286814	.	+	.	Name=Leaf_width;B73v2_pos=5:10781017;1allele=C/T;version=Hapmap2;RS=rs277690636;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	11290998	11291097	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:10785300;1allele=T/C;version=Hapmap2;RS=rs277690673;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	11367619	11367718	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:10863235;1allele=C/A;version=Hapmap2;RS=rs829567636;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	11405794	11405893	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:10902188;1allele=C/T;version=Hapmap2;RS=rs817322540;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	11435617	11435716	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:10932019;1allele=T/C;version=Hapmap2;RS=rs129990563;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	11440569	11440668	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:10936971;1allele=G/A;version=Hapmap2;RS=rs825282254;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	11441368	11441467	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:10937770;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	11441656	11441755	.	+	.	Name=Height_above_ear;B73v2_pos=5:10938058;1allele=C/A;version=Hapmap2;RS=rs824479365;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	11461712	11461811	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:10958114;1allele=G/A;version=Hapmap2;RS=rs814116296;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	11463836	11463935	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:10960238;1allele=G/A;version=Hapmap2;RS=rs129990699;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	11463836	11463935	.	+	.	Name=Height_above_ear;B73v2_pos=5:10960238;1allele=G/A;version=Hapmap2;RS=rs129990699;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	11481859	11481958	.	+	.	Name=Height_above_ear;B73v2_pos=5:10977521;1allele=G/A;version=Hapmap1;RS=rs131490471;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	11493102	11493201	.	+	.	Name=Glucose;B73v2_pos=5:10988764;1allele=C/T;version=Hapmap2;RS=rs810299941;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	11627718	11627817	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:11152649;1allele=G/A;version=Hapmap2;RS=rs846283111;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	11878028	11878127	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11375771;1allele=A/G;version=Hapmap2;RS=rs849821759;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	11878801	11878900	.	+	.	Name=Glucose;B73v2_pos=5:11376544;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	11902474	11902573	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11405428;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	11975814	11975913	.	+	.	Name=Glucose;B73v2_pos=5:11455740;1allele=G/A;version=Hapmap1;RS=rs812218671;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	11996165	11996264	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11489100;1allele=T/C;version=Hapmap2;RS=rs810909609;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	12022739	12022838	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11520236;1allele=C/A;version=Hapmap2;RS=rs277692010;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	12123978	12124077	.	+	.	Name=Cob_diameter;B73v2_pos=5:11596864;1allele=C/T;version=Hapmap2;RS=rs828050162;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	12133904	12134003	.	+	.	Name=Leaf_width;B73v2_pos=5:11606790;1allele=A/T;version=Hapmap2;RS=rs813143631;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	12134566	12134665	.	+	.	Name=Glucose;B73v2_pos=5:11607452;1allele=G/A;version=Hapmap2;RS=rs826891852;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	12134603	12134702	.	+	.	Name=Glucose;B73v2_pos=5:11607489;1allele=T/C;version=Hapmap2;RS=rs810708142;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	12167941	12168040	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:11639328;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	12221123	12221222	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:11691259;1allele=C/G;version=Hapmap2;RS=rs277692221;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	12221954	12222053	.	+	.	Name=Ear_row_number;B73v2_pos=5:11692090;1allele=A/C;version=Hapmap2;RS=rs725634830;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	12222656	12222755	.	+	.	Name=Ear_row_number;B73v2_pos=5:11692792;1allele=G/C;version=Hapmap2;RS=rs832041328;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	12222810	12222909	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11692946;1allele=A/G;version=Hapmap2;RS=rs821385768;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	12396508	12396607	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:11786226;1allele=G/A;version=Hapmap2;RS=rs834363636;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	12398478	12398577	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:11788196;1allele=G/A;version=Hapmap2;RS=rs817205982;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	12408674	12408773	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11798392;1allele=C/T;version=Hapmap1;RS=rs131491292;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	12442765	12442864	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11832483;1allele=A/G;version=Hapmap2;RS=rs835434339;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	12495197	12495296	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11884557;1allele=T/G;version=Hapmap2;RS=rs825585810;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	12502948	12503047	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:11892304;1allele=T/C;version=Hapmap2;RS=rs819652122;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	12506425	12506524	.	+	.	Name=Glucose;B73v2_pos=5:11895781;1allele=C/T;version=Hapmap2;RS=rs277692634;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	12532633	12532732	.	+	.	Name=Leaf_width;B73v2_pos=5:11921982;1allele=C/A;version=Hapmap2;RS=rs827410780;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	12534503	12534601	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11923852;1allele=G/C;version=Hapmap2;RS=rs837490253;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	12535192	12535291	.	+	.	Name=Tassel_length;B73v2_pos=5:11924550;1allele=C/G;version=Hapmap2;RS=rs277692774;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	12566555	12566654	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:11955915;1allele=T/G;version=Hapmap2;RS=rs817668719;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	12639663	12639762	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:12030913;1allele=A/T;version=Hapmap2;RS=rs819435974;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	12640955	12641054	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:12032205;1allele=C/A;version=Hapmap2;RS=rs849335643;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	12641090	12641189	.	+	.	Name=Glucose;B73v2_pos=5:12032340;1allele=G/C;version=Hapmap2;RS=rs277693029;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	12649450	12649549	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:12040700;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	12841779	12841878	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:12250428;1allele=A/G;version=Hapmap2;RS=rs801464054;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	12860617	12860716	.	+	.	Name=Malate;B73v2_pos=5:12269268;1allele=G/A;version=Hapmap2;RS=rs129992756;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	12867293	12867392	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:12275944;1allele=A/C;version=Hapmap2;RS=rs725179366;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	12937814	12937913	.	+	.	Name=Leaf_width;B73v2_pos=5:12398075;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	13062478	13062577	.	+	.	Name=Glucose;B73v2_pos=5:12519835;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	13074255	13074354	.	+	.	Name=Height_above_ear;B73v2_pos=5:12531739;1allele=T/C;version=Hapmap2;RS=rs805875096;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	13092615	13092714	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:12550099;1allele=G/A;version=Hapmap2;RS=rs818130600;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	13094264	13094363	.	+	.	Name=Ear_row_number;B73v2_pos=5:12551748;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	13094371	13094470	.	+	.	Name=Ear_row_number;B73v2_pos=5:12551855;1allele=A/G;version=Hapmap1;RS=rs131492783;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	13101547	13101646	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:12558280;1allele=T/C;version=Hapmap2;RS=rs816402393;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	13123297	13123396	.	+	.	Name=Ear_row_number;B73v2_pos=5:12580030;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	13189649	13189748	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:12642976;1allele=T/C;version=Hapmap2;RS=rs825598775;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	13207656	13207755	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:12660710;1allele=T/C;version=Hapmap2;RS=rs807580382;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	13253600	13253699	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:12706826;1allele=T/C;version=Hapmap2;RS=rs807616806;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	13450483	13450582	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:12906365;1allele=G/C;version=Hapmap2;RS=rs277694379;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	13682795	13682894	.	+	.	Name=Cob_diameter;B73v2_pos=5:13143160;1allele=A/G;version=Hapmap2;RS=rs277694618;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	13686010	13686109	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:13166299;1allele=C/T;version=Hapmap2;RS=rs725579731;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	13701652	13701751	.	+	.	Name=Ear_row_number;B73v2_pos=5:13181590;1allele=A/C;version=Hapmap2;RS=rs131493363;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	13705747	13705846	.	+	.	Name=Glucose;B73v2_pos=5:13185228;1allele=T/C;version=Hapmap2;RS=rs277694721;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	13706697	13706796	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:13186178;1allele=T/C;version=Hapmap2;RS=rs129993880;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	13823634	13823733	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:13303889;1allele=C/T;version=Hapmap2;RS=rs829469021;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	13824411	13824510	.	+	.	Name=Ear_row_number;B73v2_pos=5:13304666;1allele=C/G;version=Hapmap2;RS=rs845393714;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	13881239	13881338	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:150915935;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	13909269	13909368	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:13392258;1allele=C/G;version=Hapmap2;RS=rs834201037;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	13913853	13913952	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:13396842;1allele=A/G;version=Hapmap2;RS=rs845907311;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	13919707	13919806	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:13402696;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	13920929	13921028	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:13403918;1allele=G/A;version=Hapmap2;RS=rs842985506;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	13922067	13922166	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:13405056;1allele=C/A;version=Hapmap2;RS=rs277695086;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	13923659	13923758	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:13406648;1allele=T/G;version=Hapmap2;RS=rs824348156;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	13926219	13926318	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:13409208;1allele=T/C;version=Hapmap2;RS=rs277695107;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	14017215	14017314	.	+	.	Name=Leaf_width;B73v2_pos=5:13500917;1allele=A/G;version=Hapmap2;RS=rs277695167;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	14020414	14020513	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:13504116;1allele=A/T;version=Hapmap2;RS=rs277695179;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	14022219	14022318	.	+	.	Name=Leaf_width;B73v2_pos=5:13505921;1allele=A/C;version=Hapmap1;RS=rs131493967;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	14093818	14093917	.	+	.	Name=Leaf_width;B73v2_pos=5:13577448;1allele=A/C;version=Hapmap2;RS=rs131493990;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	14121318	14121417	.	+	.	Name=Cob_diameter;B73v2_pos=5:13604940;1allele=G/T;version=Hapmap2;RS=rs814628853;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	14196583	14196682	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:13665232;1allele=A/C;version=Hapmap2;RS=rs129995003;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	14259334	14259433	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:13732428;1allele=A/G;version=Hapmap2;RS=rs826720632;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	14332630	14332729	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:13803089;1allele=ACGT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	14343248	14343347	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:13813707;1allele=A/T;version=Hapmap1;RS=rs131494608;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	14345150	14345249	.	+	.	Name=Glucose;B73v2_pos=5:13815609;1allele=A/C;version=Hapmap2;RS=rs129995350;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	14510331	14510430	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:13968822;1allele=G/A;version=Hapmap2;RS=rs277696149;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	14516480	14516579	.	+	.	Name=Cob_diameter;B73v2_pos=5:13974971;1allele=A/C;version=Hapmap2;RS=rs129995631;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	14530674	14530773	.	+	.	Name=Cob_diameter;B73v2_pos=5:13989165;1allele=G/A;version=Hapmap2;RS=rs277696180;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	14565890	14565989	.	+	.	Name=Cob_diameter;B73v2_pos=5:14024387;1allele=A/G;version=Hapmap2;RS=rs829118192;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	15142713	15142812	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:14472097;1allele=T/C;version=Hapmap2;RS=rs277696943;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	15203586	15203685	.	+	.	Name=Ear_row_number;B73v2_pos=5:14514390;1allele=T/C;version=Hapmap2;RS=rs129996685;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	15252532	15252631	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:14586977;1allele=G/A;version=Hapmap1;RS=rs131495517;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	15263379	15263478	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:14597824;1allele=A/T;version=Hapmap2;RS=rs838105653;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	15265366	15265466	.	+	.	Name=Leaf_width;B73v2_pos=5:14599811;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	15332327	15332426	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:14649771;1allele=A/G;version=Hapmap2;RS=rs828397070;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	15335800	15335899	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:14653241;1allele=A/T;version=Hapmap1;RS=rs824691239;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	15335800	15335899	.	+	.	Name=Days_to_silk;B73v2_pos=5:14653241;1allele=A/T;version=Hapmap2;RS=rs824691239;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	15338152	15338251	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:14655593;1allele=A/T;version=Hapmap2;RS=rs836587505;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	15343382	15343481	.	+	.	Name=Height_above_ear;B73v2_pos=2:106395640;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	15362922	15363021	.	+	.	Name=Nitrate;B73v2_pos=5:14680367;1allele=G/A;version=Hapmap2;RS=rs835973021;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	15484646	15484745	.	+	.	Name=Ear_row_number;B73v2_pos=5:14810217;1allele=A/C;version=Hapmap2;RS=rs832536692;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	15489113	15489212	.	+	.	Name=Nitrate;B73v2_pos=5:14814684;1allele=C/T;version=Hapmap2;RS=rs821463569;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	15518129	15518228	.	+	.	Name=Leaf_width;B73v2_pos=5:14843479;1allele=C/A;version=Hapmap2;RS=rs824969322;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	15678271	15678370	.	+	.	Name=Leaf_width;B73v2_pos=5:15023997;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	15895800	15895899	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:15186697;1allele=T/C;version=Hapmap2;RS=rs277697824;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	15897558	15897657	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15188455;1allele=T/C;version=Hapmap2;RS=rs277697838;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	15995280	15995379	.	+	.	Name=Malate;B73v2_pos=5:15288330;1allele=A/G;version=Hapmap2;RS=rs833852521;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	16017480	16017579	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15310530;1allele=G/T;version=Hapmap2;RS=rs814762234;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	16018457	16018556	.	+	.	Name=Leaf_width;B73v2_pos=5:15311507;1allele=T/C;version=Hapmap2;RS=rs806849826;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	16085511	16085610	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15385047;1allele=C/T;version=Hapmap2;RS=rs835487680;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	16139703	16139802	.	+	.	Name=Nitrate;B73v2_pos=5:15439240;1allele=T/C;version=Hapmap2;RS=rs817717603;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	16164249	16164348	.	+	.	Name=Ear_row_number;B73v2_pos=5:15463785;1allele=C/G;version=Hapmap2;RS=rs826217507;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	16164415	16164514	.	+	.	Name=Ear_row_number;B73v2_pos=5:15463951;1allele=G/A;version=Hapmap2;RS=rs131496822;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	16164421	16164520	.	+	.	Name=Ear_row_number;B73v2_pos=5:15463957;1allele=A/C;version=Hapmap2;RS=rs131496823;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	16268143	16268242	.	+	.	Name=Ear_row_number;B73v2_pos=5:15547134;1allele=A/G;version=Hapmap2;RS=rs129998494;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	16268222	16268321	.	+	.	Name=Ear_row_number;B73v2_pos=5:15547213;1allele=G/C;version=Hapmap1;RS=rs726292913;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	16268223	16268322	.	+	.	Name=Ear_row_number;B73v2_pos=5:15547214;1allele=C/A;version=Hapmap1;RS=rs724478548;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	16268457	16268556	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:15547448;1allele=A/C;version=Hapmap2;RS=rs277698302;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	16273894	16273993	.	+	.	Name=Ear_row_number;B73v2_pos=5:15552885;1allele=T/C;version=Hapmap2;RS=rs129998546;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	16293676	16293775	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15572667;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	16328094	16328193	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15607974;1allele=C/T;version=Hapmap1;RS=rs131497051;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	16379284	16379383	.	+	.	Name=Glucose;B73v2_pos=5:15661028;1allele=C/T;version=Hapmap2;RS=rs828971484;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	16404553	16404652	.	+	.	Name=Glucose;B73v2_pos=5:15686298;1allele=C/T;version=Hapmap2;RS=rs802712847;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	16435337	16435436	.	+	.	Name=Ear_row_number;B73v2_pos=5:15716981;1allele=A/G;version=Hapmap2;RS=rs129999176;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	16442105	16442204	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:15723749;1allele=C/T;version=Hapmap2;RS=rs129999238;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	16454333	16454432	.	+	.	Name=Glucose;B73v2_pos=5:15735974;1allele=G/A;version=Hapmap2;RS=rs825897067;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	16518825	16518924	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15801503;1allele=T/A;version=Hapmap1;RS=rs1064325507;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	16525145	16525244	.	+	.	Name=Nitrate;B73v2_pos=5:15807823;1allele=A/G;version=Hapmap2;RS=rs833683718;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	16547696	16547795	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:15830373;1allele=G/A;version=Hapmap2;RS=rs812734910;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	16558832	16558931	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15841509;1allele=T/C;version=Hapmap2;RS=rs129999483;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	16559273	16559372	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:15841950;1allele=T/G;version=Hapmap2;RS=rs129999488;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	16624902	16625001	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:15884376;1allele=T/C;version=Hapmap2;RS=rs849899398;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	16632513	16632612	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:15876765;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	16632513	16632612	.	+	.	Name=Ear_height;B73v2_pos=5:15876765;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	16788028	16788127	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:16061754;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	16808015	16808114	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:16124769;1allele=C/T;version=Hapmap2;RS=rs839945714;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	16808266	16808365	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:16125020;1allele=A/G;version=Hapmap2;RS=rs818758042;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	16921717	16921816	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:16208163;1allele=C/G;version=Hapmap2;RS=rs837929328;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	16922356	16922455	.	+	.	Name=Glucose;B73v2_pos=5:16208802;1allele=A/G;version=Hapmap2;RS=rs831561469;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	16930328	16930427	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:16216774;1allele=A/G;version=Hapmap2;RS=rs725317118;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	17047604	17047703	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:16318495;1allele=C/T;version=Hapmap2;RS=rs839710571;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	17049920	17050019	.	+	.	Name=Glutamate;B73v2_pos=5:16320811;1allele=A/G;version=Hapmap2;RS=rs131497678;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	17168659	17168758	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:16425878;1allele=C/T;version=Hapmap1;RS=rs848004904;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	17168669	17168768	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:16425888;1allele=C/A;version=Hapmap2;RS=rs834125851;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	17173297	17173396	.	+	.	Name=Glucose;B73v2_pos=5:16430517;1allele=A/G;version=Hapmap2;RS=rs806294730;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	17175968	17176067	.	+	.	Name=Total_amino_acids;B73v2_pos=5:16433188;1allele=G/A;version=Hapmap1;RS=rs131497820;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	17298593	17298692	.	+	.	Name=Glucose;B73v2_pos=5:16557786;1allele=G/A;version=Hapmap2;RS=rs815577578;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	17397281	17397380	.	+	.	Name=Stalk_strength;B73v2_pos=5:16648051;1allele=T/C;version=Hapmap2;RS=rs843694873;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	17437508	17437607	.	+	.	Name=Glucose;B73v2_pos=5:16688286;1allele=G/T;version=Hapmap2;RS=rs130000719;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	17448840	17448939	.	+	.	Name=Glucose;B73v2_pos=5:16699618;1allele=G/A;version=Hapmap2;RS=rs130000775;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	17454127	17454226	.	+	.	Name=Glucose;B73v2_pos=5:16704905;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	17509799	17509898	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:16761964;1allele=G/T;version=Hapmap2;RS=rs823166240;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	17509800	17509899	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:16761965;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	17534208	17534307	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:16784315;1allele=G/A;version=Hapmap2;RS=rs820893247;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	17555666	17555765	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:16805775;1allele=C/T;version=Hapmap2;RS=rs837913790;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	17557621	17557720	.	+	.	Name=Cob_diameter;B73v2_pos=5:16807730;1allele=A/T;version=Hapmap2;RS=rs277700195;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	17566848	17566947	.	+	.	Name=Glucose;B73v2_pos=5:16755476;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	17567827	17567926	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:16754497;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	17605715	17605814	.	+	.	Name=Glucose;B73v2_pos=5:16841701;1allele=G/A;version=Hapmap2;RS=rs807408270;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	17605917	17606016	.	+	.	Name=Ear_height;B73v2_pos=5:16841903;1allele=A/G;version=Hapmap2;RS=rs808262799;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	17877782	17877881	.	+	.	Name=Stalk_strength;B73v2_pos=5:17125056;1allele=G/A;version=Hapmap2;RS=rs821234222;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	17905920	17906019	.	+	.	Name=Glucose;B73v2_pos=5:17153205;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	17918969	17919068	.	+	.	Name=Glucose;B73v2_pos=5:17166254;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18012484	18012583	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:17985162;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18012484	18012583	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17985162;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18032151	18032250	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:17965486;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18194142	18194241	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17867327;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18400408	18400507	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:17631977;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18400408	18400507	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17631977;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18430916	18431015	.	+	.	Name=Leaf_width;B73v2_pos=5:17601805;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18441999	18442098	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:17593056;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18471659	18471758	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17563393;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18471661	18471760	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:17563391;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18471661	18471760	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17563391;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18494949	18495048	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:17538906;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18504788	18504887	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:17524162;1allele=G/A;version=Hapmap2;RS=rs840331229;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	18505094	18505193	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:17524468;1allele=T/C;version=Hapmap2;RS=rs829993215;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	18505094	18505193	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:17524468;1allele=T/C;version=Hapmap2;RS=rs829993215;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	18520863	18520962	.	+	.	Name=Glucose;B73v2_pos=5:17493168;1allele=G/A;version=Hapmap2;RS=rs810557213;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	18523196	18523295	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17495501;1allele=G/C;version=Hapmap2;RS=rs801441834;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	18523312	18523411	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17495617;1allele=A/G;version=Hapmap2;RS=rs819751144;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	18523445	18523544	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17495750;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18523633	18523732	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17495938;1allele=G/A;version=Hapmap2;RS=rs813685395;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	18523653	18523752	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17495958;1allele=A/G;version=Hapmap2;RS=rs827648686;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	18637502	18637601	.	+	.	Name=Stalk_strength;B73v2_pos=5:17378404;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18637550	18637649	.	+	.	Name=Stalk_strength;B73v2_pos=5:17378356;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18662224	18662323	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:17354237;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18671217	18671316	.	+	.	Name=Total_amino_acids;B73v2_pos=5:17345244;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18674877	18674976	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:17341584;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18700842	18700941	.	+	.	Name=Stalk_strength;B73v2_pos=5:17316559;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18701863	18701962	.	+	.	Name=Stalk_strength;B73v2_pos=5:17315538;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18702376	18702475	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17315025;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18741978	18742077	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:17275689;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18750583	18750682	.	+	.	Name=Ear_row_number;B73v2_pos=5:17267084;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18760466	18760565	.	+	.	Name=Glucose;B73v2_pos=5:17190698;1allele=C/T;version=Hapmap2;RS=rs822369422;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	18780086	18780185	.	+	.	Name=Glucose;B73v2_pos=5:17230263;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18780425	18780524	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:17229924;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18780472	18780571	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:17229877;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	18783187	18783286	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:17227162;1allele=T/G;version=Hapmap2;RS=rs277700782;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	18783187	18783286	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17227162;1allele=T/G;version=Hapmap2;RS=rs277700782;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	18943720	18943819	.	+	.	Name=Glucose;B73v2_pos=5:18004820;1allele=T/C;version=Hapmap2;RS=rs130002581;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19055246	19055345	.	+	.	Name=Nitrate;B73v2_pos=5:18118599;1allele=G/A;version=Hapmap2;RS=rs820462627;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19148902	19149001	.	+	.	Name=Glucose;B73v2_pos=5:18186379;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19164353	19164452	.	+	.	Name=Nitrate;B73v2_pos=5:18228237;1allele=C/T;version=Hapmap2;RS=rs812622253;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19210351	19210450	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18274487;1allele=C/A;version=Hapmap2;RS=rs826091404;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	19210351	19210450	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18274487;1allele=C/A;version=Hapmap2;RS=rs826091404;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	19211308	19211407	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18275444;1allele=C/T;version=Hapmap2;RS=rs827651236;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19211815	19211914	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18275951;1allele=C/A;version=Hapmap1;RS=rs131499634;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19281269	19281368	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:18346849;1allele=A/G;version=Hapmap2;RS=rs277702601;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19310992	19311091	.	+	.	Name=Ear_row_number;B73v2_pos=5:18376922;1allele=C/T;version=Hapmap2;RS=rs277702684;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19378927	19379026	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:18452408;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19380851	19380950	.	+	.	Name=Glutamate;B73v2_pos=5:18454332;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19387003	19387102	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:18460484;1allele=A/G;version=Hapmap2;RS=rs839542700;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19469946	19470045	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18541682;1allele=C/T;version=Hapmap2;RS=rs277702921;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19483576	19483675	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:18550861;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19484331	19484429	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:18550106;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19497660	19497759	.	+	.	Name=Total_amino_acids;B73v2_pos=5:18569663;1allele=C/T;version=Hapmap1;RS=rs131499922;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	19500931	19501030	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:18572934;1allele=T/C;version=Hapmap2;RS=rs802446751;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19503383	19503482	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18575386;1allele=T/C;version=Hapmap2;RS=rs842221045;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19503655	19503754	.	+	.	Name=Ear_row_number;B73v2_pos=5:18575658;1allele=A/G;version=Hapmap2;RS=rs130003795;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	19504266	19504365	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:18576269;1allele=T/C;version=Hapmap2;RS=rs277703044;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19504266	19504365	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18576269;1allele=T/C;version=Hapmap2;RS=rs277703044;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19504349	19504448	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18576352;1allele=G/T;version=Hapmap2;RS=rs277703045;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	19506318	19506417	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:18578321;1allele=G/A;version=Hapmap2;RS=rs844240757;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19506318	19506417	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18578321;1allele=G/A;version=Hapmap2;RS=rs844240757;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19506318	19506417	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18578321;1allele=G/A;version=Hapmap2;RS=rs844240757;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19510151	19510250	.	+	.	Name=Ear_row_number;B73v2_pos=5:18582154;1allele=C/T;version=Hapmap2;RS=rs130003831;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19512869	19512968	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18584872;1allele=A/G;version=Hapmap2;RS=rs849677594;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	19516554	19516653	.	+	.	Name=Ear_row_number;B73v2_pos=5:18588784;1allele=T/A;version=Hapmap2;RS=rs832789283;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	19517057	19517156	.	+	.	Name=Ear_row_number;B73v2_pos=5:18589287;1allele=G/C;version=Hapmap2;RS=rs810803140;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	19600615	19600714	.	+	.	Name=Days_to_silk;B73v2_pos=5:18675328;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19600776	19600875	.	+	.	Name=Days_to_silk;B73v2_pos=5:18675167;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19603329	19603428	.	+	.	Name=Ear_row_number;B73v2_pos=5:18672614;1allele=A/G;version=Hapmap2;RS=rs822049817;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	19630827	19630926	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18701711;1allele=A/T;version=Hapmap1;RS=rs130004071;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	19632887	19632986	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18703771;1allele=T/C;version=Hapmap2;RS=rs277703375;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19633067	19633166	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:18703951;1allele=A/C;version=Hapmap2;RS=rs277703382;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	19634035	19634134	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:18704919;1allele=C/A;version=Hapmap2;RS=rs130004094;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	19634035	19634134	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18704919;1allele=C/A;version=Hapmap2;RS=rs130004094;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	19662098	19662197	.	+	.	Name=Starch;B73v2_pos=5:18737163;1allele=C/T;version=Hapmap2;RS=rs277703431;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19663963	19664062	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:18739028;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19724371	19724470	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18798938;1allele=C/T;version=Hapmap2;RS=rs829052051;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19724371	19724470	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:18798938;1allele=C/T;version=Hapmap2;RS=rs829052051;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	19767808	19767907	.	+	.	Name=Ear_height;B73v2_pos=5:18838177;1allele=G/T;version=Hapmap2;RS=rs828012587;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	19770518	19770617	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:18840888;1allele=A/G;version=Hapmap2;RS=rs835909537;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	19770524	19770623	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:18840894;1allele=G/T;version=Hapmap2;RS=rs849175173;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	19772330	19772429	.	+	.	Name=Ear_height;B73v2_pos=5:18842700;1allele=T/C;version=Hapmap2;RS=rs838587552;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	19773470	19773569	.	+	.	Name=Ear_row_number;B73v2_pos=5:18843840;1allele=G/A;version=Hapmap2;RS=rs130004551;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	19812615	19812715	.	+	.	Name=Tassel_length;B73v2_pos=5:18924667;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	19926689	19926788	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:18997010;1allele=G/A;version=Hapmap2;RS=rs846428119;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19963401	19963500	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:19033725;1allele=G/A;version=Hapmap2;RS=rs830215328;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	19984789	19984888	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:19055114;1allele=G/A;version=Hapmap2;RS=rs130004863;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	20111260	20111359	.	+	.	Name=Glucose;B73v2_pos=5:19181621;1allele=C/T;version=Hapmap2;RS=rs830079862;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	20211151	20211250	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:19270296;1allele=C/T;version=Hapmap2;RS=rs836023908;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	20481914	20482013	.	+	.	Name=Stalk_strength;B73v2_pos=5:19526589;1allele=G/A;version=Hapmap1;RS=rs131500815;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	20611349	20611448	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:19669317;1allele=C/T;version=Hapmap2;RS=rs277704359;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	20613647	20613746	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:19671613;1allele=G/T;version=Hapmap2;RS=rs277704379;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	20651323	20651422	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:19709289;1allele=T/C;version=Hapmap2;RS=rs130005422;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	20722421	20722520	.	+	.	Name=Days_to_silk;B73v2_pos=5:19779290;1allele=G/T;version=Hapmap1;RS=rs131501293;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	20722858	20722957	.	+	.	Name=Total_amino_acids;B73v2_pos=5:19779727;1allele=G/T;version=Hapmap1;RS=rs131501299;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	20830240	20830339	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:19894663;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	20847725	20847824	.	+	.	Name=Glucose;B73v2_pos=5:19912148;1allele=A/T;version=Hapmap2;RS=rs842132196;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	20848206	20848305	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:19912629;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	21044387	21044486	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:20110851;1allele=A/G;version=Hapmap2;RS=rs814771794;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	21058219	21058318	.	+	.	Name=Leaf_length;B73v2_pos=5:20124689;1allele=C/T;version=Hapmap2;RS=rs829792424;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	21067076	21067175	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:20133546;1allele=C/T;version=Hapmap1;RS=rs131501539;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	21070095	21070194	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:20136565;1allele=C/T;version=Hapmap2;RS=rs828072383;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	21122101	21122200	.	+	.	Name=Ear_row_number;B73v2_pos=5:20190682;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	21130271	21130370	.	+	.	Name=Glucose;B73v2_pos=5:20198850;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	21150530	21150629	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:20219108;1allele=T/C;version=Hapmap2;RS=rs277705933;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	21183710	21183809	.	+	.	Name=Glutamate;B73v2_pos=5:20252289;1allele=T/C;version=Hapmap2;RS=rs803876882;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	21208457	21208556	.	+	.	Name=Starch;B73v2_pos=5:20277036;1allele=C/G;version=Hapmap2;RS=rs806036312;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	21234473	21234572	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:20303300;1allele=C/T;version=Hapmap2;RS=rs130007157;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	21246214	21246313	.	+	.	Name=Ear_row_number;B73v2_pos=5:20315044;1allele=G/A;version=Hapmap2;RS=rs277706196;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	21350140	21350239	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:20412494;1allele=A/G;version=Hapmap2;RS=rs130007392;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	21350599	21350698	.	+	.	Name=Ear_row_number;B73v2_pos=5:20412953;1allele=G/C;version=Hapmap2;RS=rs277706301;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	21438667	21438766	.	+	.	Name=Ear_row_number;B73v2_pos=5:20488933;1allele=C/G;version=Hapmap1;RS=rs842099696;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	21438667	21438766	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:20488933;1allele=C/G;version=Hapmap1;RS=rs842099696;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	21439102	21439201	.	+	.	Name=Ear_row_number;B73v2_pos=5:20489368;1allele=G/A;version=Hapmap1;RS=rs131501802;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	21648358	21648457	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:20596270;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	21658204	21658303	.	+	.	Name=Stalk_strength;B73v2_pos=5:20635566;1allele=A/G;version=Hapmap2;RS=rs277706449;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	21659129	21659228	.	+	.	Name=Stalk_strength;B73v2_pos=5:20636491;1allele=C/T;version=Hapmap2;RS=rs837426011;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	21691401	21691500	.	+	.	Name=Stalk_strength;B73v2_pos=5:20715204;1allele=T/C;version=Hapmap2;RS=rs836172615;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	21749121	21749220	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:20773533;1allele=T/C;version=Hapmap2;RS=rs131502079;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	21750184	21750283	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:20774596;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	21922602	21922701	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:20948409;1allele=G/A;version=Hapmap2;RS=rs810541815;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	21923424	21923523	.	+	.	Name=Starch;B73v2_pos=5:20949231;1allele=T/C;version=Hapmap2;RS=rs848366696;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	21963399	21963498	.	+	.	Name=Starch;B73v2_pos=5:20988875;1allele=A/T;version=Hapmap2;RS=rs277707170;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	22288341	22288440	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:21303610;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	22537203	22537302	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:21571860;1allele=T/A;version=Hapmap2;RS=rs823199254;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	22545151	22545250	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:21579808;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	22649523	22649622	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:21703775;1allele=T/C;version=Hapmap2;RS=rs832779559;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	22717969	22718068	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:21766357;1allele=C/T;version=Hapmap2;RS=rs277707906;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	22845898	22845997	.	+	.	Name=Stalk_strength;B73v2_pos=5:21892650;1allele=C/A;version=Hapmap2;RS=rs130009439;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	22857875	22857976	.	+	.	Name=Starch;B73v2_pos=5:21903168;1allele=G/A;version=Hapmap2;RS=rs829458852;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	22860680	22860779	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:21905971;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	22897115	22897214	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:21944123;1allele=C/T;version=Hapmap2;RS=rs836559568;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	22938957	22939056	.	+	.	Name=Stalk_strength;B73v2_pos=5:21987351;1allele=G/A;version=Hapmap2;RS=rs802471527;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	22977605	22977704	.	+	.	Name=Stalk_strength;B73v2_pos=5:22025642;1allele=C/T;version=Hapmap2;RS=rs131503170;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23073881	23073980	.	+	.	Name=Stalk_strength;B73v2_pos=5:22121093;1allele=C/T;version=Hapmap2;RS=rs816585542;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23107553	23107652	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:22154705;1allele=C/T;version=Hapmap2;RS=rs815443968;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23107838	23107937	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:22154990;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	23108714	23108813	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:22155866;1allele=T/G;version=Hapmap2;RS=rs130010216;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	23136377	23136476	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:22182470;1allele=C/T;version=Hapmap2;RS=rs277708682;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23238414	23238513	.	+	.	Name=Stalk_strength;B73v2_pos=5:22287997;1allele=C/T;version=Hapmap2;RS=rs818222605;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23295841	23295940	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:22345189;1allele=C/T;version=Hapmap1;RS=rs131503431;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23610077	23610176	.	+	.	Name=Starch;B73v2_pos=5:22638501;1allele=A/G;version=Hapmap2;RS=rs842051249;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	23636451	23636550	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:22731587;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	23729808	23729907	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:22776583;1allele=C/T;version=Hapmap1;RS=rs131503913;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23752909	23753008	.	+	.	Name=Stalk_strength;B73v2_pos=5:22799578;1allele=A/G;version=Hapmap2;RS=rs829529058;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	23752922	23753021	.	+	.	Name=Stalk_strength;B73v2_pos=5:22799591;1allele=A/G;version=Hapmap2;RS=rs130011088;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	23760069	23760168	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:22806627;1allele=A/G;version=Hapmap2;RS=rs1061069261;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	23760102	23760201	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:22806660;1allele=G/A;version=Hapmap2;RS=rs1061828407;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	23760102	23760201	.	+	.	Name=Glutamate;B73v2_pos=5:22806660;1allele=G/A;version=Hapmap2;RS=rs1061828407;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	23760103	23760202	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:22806661;1allele=G/A;version=Hapmap2;RS=rs1064696435;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	23760610	23760709	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:22807168;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	23760610	23760709	.	+	.	Name=Glutamate;B73v2_pos=5:22807168;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	23760668	23760767	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:22807226;1allele=G/T;version=Hapmap2;RS=rs1063035462;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	23760668	23760767	.	+	.	Name=Glutamate;B73v2_pos=5:22807226;1allele=G/T;version=Hapmap2;RS=rs1063035462;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	23760710	23760809	.	+	.	Name=Glutamate;B73v2_pos=5:22807268;1allele=A/T;version=Hapmap2;RS=rs806841170;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	23905112	23905211	.	+	.	Name=Glucose;B73v2_pos=5:23003300;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	23952270	23952369	.	+	.	Name=Stalk_strength;B73v2_pos=5:22988316;1allele=C/T;version=Hapmap1;RS=rs131504086;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23952286	23952385	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:22988300;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	23952350	23952449	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:22988236;1allele=G/A;version=Hapmap2;RS=rs805221087;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	23968365	23968464	.	+	.	Name=Glucose;B73v2_pos=5:22972447;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	24042789	24042888	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:23105465;1allele=G/T;version=Hapmap2;RS=rs828992337;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	24091406	24091505	.	+	.	Name=Malate;B73v2_pos=5:23149930;1allele=G/C;version=Hapmap2;RS=rs277709585;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	24521217	24521316	.	+	.	Name=Leaf_length;B73v2_pos=5:23574293;1allele=G/A;version=Hapmap2;RS=rs830206525;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	24583011	24583110	.	+	.	Name=Glutamate;B73v2_pos=5:23635382;1allele=C/G;version=Hapmap2;RS=rs1064624327;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	24583128	24583227	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:23635499;1allele=T/G;version=Hapmap2;RS=rs829870996;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	24652810	24652909	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:23704872;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	24704365	24704464	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:23761883;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	24781110	24781209	.	+	.	Name=Stalk_strength;B73v2_pos=5:23837192;1allele=T/C;version=Hapmap2;RS=rs819943296;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	25226167	25226266	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:24216926;1allele=T/G;version=Hapmap2;RS=rs131505243;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	25229488	25229587	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:24220247;1allele=C/A;version=Hapmap2;RS=rs829503462;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	25599700	25599799	.	+	.	Name=Glucose;B73v2_pos=5:24621584;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	25775725	25775824	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:24795723;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	25846680	25846779	.	+	.	Name=Total_amino_acids;B73v2_pos=5:24866589;1allele=G/A;version=Hapmap2;RS=rs843127791;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	25943764	25943863	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:24963053;1allele=C/T;version=Hapmap2;RS=rs808037424;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	25989300	25989399	.	+	.	Name=Total_amino_acids;B73v2_pos=5:25006666;1allele=G/A;version=Hapmap2;RS=rs843756187;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	26006102	26006201	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:25023470;1allele=G/A;version=Hapmap2;RS=rs130013567;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	26006780	26006879	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:25024148;1allele=C/T;version=Hapmap2;RS=rs277711614;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	26008730	26008829	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:25026099;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	26028289	26028388	.	+	.	Name=Ear_row_number;B73v2_pos=5:25043447;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	26273366	26273465	.	+	.	Name=Glucose;B73v2_pos=5:25285884;1allele=G/A;version=Hapmap2;RS=rs130013907;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	26298356	26298455	.	+	.	Name=Total_amino_acids;B73v2_pos=5:25310349;1allele=C/A;version=Hapmap2;RS=rs834646932;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	26306203	26306302	.	+	.	Name=Malate;B73v2_pos=5:25318196;1allele=C/T;version=Hapmap2;RS=rs130013970;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	26354418	26354516	.	+	.	Name=Leaf_width;B73v2_pos=5:25345684;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	26400046	26400145	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:25389986;1allele=G/A;version=Hapmap2;RS=rs813624659;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	26586928	26587027	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:25570608;1allele=A/T;version=Hapmap2;RS=rs277712116;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	26729873	26729972	.	+	.	Name=Glucose;B73v2_pos=5:25716265;1allele=C/G;version=Hapmap2;RS=rs725771729;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	26731457	26731556	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:25717849;1allele=A/G;version=Hapmap2;RS=rs830629678;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	26753132	26753231	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:25740464;1allele=G/A;version=Hapmap2;RS=rs842798069;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	26795439	26795538	.	+	.	Name=Ear_row_number;B73v2_pos=5:25782147;1allele=G/A;version=Hapmap2;RS=rs824359670;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	26795587	26795686	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:25782295;1allele=G/A;version=Hapmap2;RS=rs277712394;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	27132121	27132220	.	+	.	Name=Stalk_strength;B73v2_pos=2:38921799;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	27392654	27392753	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:26369064;1allele=T/C;version=Hapmap2;RS=rs834797344;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	27423634	27423733	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:26386550;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	27472430	27472529	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:26448577;1allele=T/G;version=Hapmap2;RS=rs277712897;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	27476647	27476746	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:26452797;1allele=C/T;version=Hapmap2;RS=rs838847373;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	27599008	27599107	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:26565504;1allele=A/T;version=Hapmap2;RS=rs277712967;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	27620638	27620737	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:26587135;1allele=C/A;version=Hapmap2;RS=rs130015886;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	27926756	27926855	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:26860043;1allele=C/A;version=Hapmap1;RS=rs131506552;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	28062678	28062777	.	+	.	Name=Starch;B73v2_pos=5:26968790;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	28125225	28125324	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:27102221;1allele=A/C;version=Hapmap2;RS=rs131506707;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	28174707	28174806	.	+	.	Name=Glutamate;B73v2_pos=5:27152112;1allele=C/G;version=Hapmap2;RS=rs818378877;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	28174722	28174821	.	+	.	Name=Glutamate;B73v2_pos=5:27152127;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	28205800	28205899	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:27060866;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	28316605	28316704	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:27247474;1allele=T/C;version=Hapmap2;RS=rs130017196;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	28319583	28319682	.	+	.	Name=Glutamate;B73v2_pos=5:27250452;1allele=A/G;version=Hapmap2;RS=rs813308328;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	28326077	28326176	.	+	.	Name=Leaf_width;B73v2_pos=5:27256946;1allele=A/T;version=Hapmap2;RS=rs1060611541;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	28336069	28336168	.	+	.	Name=Glutamate;B73v2_pos=5:27266938;1allele=C/T;version=Hapmap2;RS=rs1060803457;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	28354250	28354349	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:27285491;1allele=G/A;version=Hapmap2;RS=rs727413352;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	28388028	28388127	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:27320025;1allele=T/C;version=Hapmap2;RS=rs809573747;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	28434843	28434942	.	+	.	Name=Malate;B73v2_pos=5:27375811;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	28490102	28490201	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:27431813;1allele=C/T;version=Hapmap2;RS=rs1064398954;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	28496502	28496601	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:27438214;1allele=G/A;version=Hapmap2;RS=rs849785041;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	28502740	28502839	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:27444453;1allele=C/A;version=Hapmap2;RS=rs1061170126;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	28569469	28569568	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:27512476;1allele=T/G;version=Hapmap2;RS=rs724217952;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	28571676	28571775	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:27514683;1allele=T/C;version=Hapmap2;RS=rs277714388;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	28571788	28571887	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:27514795;1allele=G/T;version=Hapmap2;RS=rs1062004819;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	28572590	28572689	.	+	.	Name=Glutamate;B73v2_pos=5:27515597;1allele=T/C;version=Hapmap2;RS=rs277714396;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	28585868	28585967	.	+	.	Name=Glutamate;B73v2_pos=5:27528876;1allele=A/C;version=Hapmap2;RS=rs811741325;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	28591001	28591100	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:27534009;1allele=T/C;version=Hapmap2;RS=rs130017724;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	28591811	28591910	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:27534819;1allele=A/T;version=Hapmap2;RS=rs277714472;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	28640102	28640201	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:27593144;1allele=A/G;version=Hapmap2;RS=rs277714605;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	28759803	28759902	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:27694493;1allele=A/T;version=Hapmap2;RS=rs846502774;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	28763403	28763502	.	+	.	Name=Leaf_width;B73v2_pos=5:27698093;1allele=G/A;version=Hapmap2;RS=rs1063665601;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	28799718	28799817	.	+	.	Name=Glutamate;B73v2_pos=5:27734409;1allele=C/T;version=Hapmap2;RS=rs1060674084;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	28804273	28804372	.	+	.	Name=Leaf_width;B73v2_pos=5:27738964;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	28805681	28805780	.	+	.	Name=Leaf_width;B73v2_pos=5:27740372;1allele=G/A;version=Hapmap2;RS=rs836176269;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	28838869	28838968	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:27763684;1allele=G/T;version=Hapmap2;RS=rs1062576676;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	28853203	28853302	.	+	.	Name=Glutamate;B73v2_pos=5:27777962;1allele=T/C;version=Hapmap2;RS=rs1061609938;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	28853212	28853311	.	+	.	Name=Glutamate;B73v2_pos=5:27777971;1allele=C/T;version=Hapmap2;RS=rs1064713090;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	28859852	28859951	.	+	.	Name=Leaf_width;B73v2_pos=5:27784611;1allele=A/T;version=Hapmap2;RS=rs1064392868;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	28869611	28869710	.	+	.	Name=Glutamate;B73v2_pos=5:27794069;1allele=T/C;version=Hapmap2;RS=rs277714917;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	28915352	28915451	.	+	.	Name=Leaf_width;B73v2_pos=5:27860866;1allele=T/C;version=Hapmap2;RS=rs277715001;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	28926965	28927064	.	+	.	Name=Leaf_width;B73v2_pos=5:27872480;1allele=T/A;version=Hapmap2;RS=rs807980833;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	28937720	28937819	.	+	.	Name=Leaf_width;B73v2_pos=5:27883236;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	28939102	28939201	.	+	.	Name=Malate;B73v2_pos=5:27884618;1allele=T/C;version=Hapmap2;RS=rs836877639;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	29002940	29003039	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:27947325;1allele=A/T;version=Hapmap2;RS=rs821824851;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	29004262	29004361	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:27948647;1allele=G/A;version=Hapmap1;RS=rs131507218;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	29081631	29081730	.	+	.	Name=Leaf_width;B73v2_pos=5:28026033;1allele=G/A;version=Hapmap2;RS=rs726746887;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	29098519	29098618	.	+	.	Name=Leaf_width;B73v2_pos=5:28042926;1allele=T/C;version=Hapmap2;RS=rs1061367802;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	29233927	29234026	.	+	.	Name=Leaf_width;B73v2_pos=5:28171646;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	29260037	29260136	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:28197755;1allele=C/T;version=Hapmap2;RS=rs277715426;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	29274134	29274233	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:28211852;1allele=A/G;version=Hapmap2;RS=rs802344749;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	29297285	29297384	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:28235005;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	29348198	29348297	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:28334279;1allele=C/A;version=Hapmap2;RS=rs277715877;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	29454154	29454253	.	+	.	Name=Leaf_width;B73v2_pos=5:28436498;1allele=T/C;version=Hapmap2;RS=rs848428486;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	29467222	29467321	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:28449566;1allele=G/A;version=Hapmap2;RS=rs277716225;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	29467854	29467953	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:28450198;1allele=C/T;version=Hapmap2;RS=rs277716235;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	29468356	29468455	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:28450700;1allele=T/C;version=Hapmap1;RS=rs130019196;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	29640288	29640387	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:28626857;1allele=A/G;version=Hapmap2;RS=rs277716423;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	29660793	29660892	.	+	.	Name=Glutamate;B73v2_pos=5:28660721;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	29660820	29660919	.	+	.	Name=Glutamate;B73v2_pos=5:28660748;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30672510	30672609	.	+	.	Name=Total_amino_acids;B73v2_pos=5:29280693;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30767525	30767624	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29449981;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30823742	30823841	.	+	.	Name=Total_amino_acids;B73v2_pos=5:29504843;1allele=A/G;version=Hapmap2;RS=rs805584647;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	30869681	30869780	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29592327;1allele=G/A;version=Hapmap2;RS=rs1062172586;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	30896254	30896353	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29627267;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30897318	30897417	.	+	.	Name=Leaf_width;B73v2_pos=5:29626203;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30897342	30897441	.	+	.	Name=Leaf_width;B73v2_pos=5:29626179;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30902358	30902457	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29621163;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30904863	30904962	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29618658;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30907181	30907280	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29616340;1allele=T/C;version=Hapmap2;RS=rs840137002;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	30933609	30933708	.	+	.	Name=Leaf_width;B73v2_pos=5:29652614;1allele=C/A;version=Hapmap2;RS=rs830487836;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	30948928	30949024	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29644776;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	30984684	30984783	.	+	.	Name=Leaf_width;B73v2_pos=5:29700746;1allele=A/G;version=Hapmap2;RS=rs849238760;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	31060850	31060949	.	+	.	Name=Leaf_width;B73v2_pos=5:29774813;1allele=C/T;version=Hapmap2;RS=rs130019692;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	31061427	31061526	.	+	.	Name=Total_amino_acids;B73v2_pos=5:29775390;1allele=C/T;version=Hapmap2;RS=rs847625250;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31184485	31184584	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:29898262;1allele=G/T;version=Hapmap1;RS=rs131508124;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	31207042	31207141	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:29920819;1allele=C/G;version=Hapmap2;RS=rs831882295;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	31280134	31280233	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:29993764;1allele=C/T;version=Hapmap2;RS=rs277717644;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31369478	31369577	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:30082940;1allele=C/T;version=Hapmap2;RS=rs839784096;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31377731	31377830	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:30091194;1allele=G/A;version=Hapmap2;RS=rs846223251;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	31387511	31387610	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:30101056;1allele=G/A;version=Hapmap2;RS=rs825221583;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	31405950	31406049	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:30119497;1allele=G/C;version=Hapmap2;RS=rs819797673;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	31407159	31407258	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:30120706;1allele=G/A;version=Hapmap2;RS=rs1063076718;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	31407898	31407997	.	+	.	Name=Total_amino_acids;B73v2_pos=5:30121445;1allele=T/C;version=Hapmap2;RS=rs834266804;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	31425066	31425165	.	+	.	Name=Total_amino_acids;B73v2_pos=5:30162782;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	31450328	31450427	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:30143113;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	31489859	31489958	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:30195642;1allele=C/G;version=Hapmap2;RS=rs815723414;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	31512453	31512552	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:30218228;1allele=A/G;version=Hapmap2;RS=rs131508377;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	31643767	31643866	.	+	.	Name=Leaf_width;B73v2_pos=5:30411181;1allele=G/A;version=Hapmap2;RS=rs277718467;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31672431	31672530	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:30382515;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	31699950	31700049	.	+	.	Name=Glutamate;B73v2_pos=5:30364719;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	31737805	31737904	.	+	.	Name=Total_amino_acids;B73v2_pos=5:30459811;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	31763638	31763737	.	+	.	Name=Total_amino_acids;B73v2_pos=5:30456223;1allele=T/A;version=Hapmap2;RS=rs807944560;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	31781556	31781655	.	+	.	Name=Total_amino_acids;B73v2_pos=5:30482645;1allele=C/T;version=Hapmap2;RS=rs838631862;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31836676	31836775	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:30526952;1allele=A/C;version=Hapmap2;RS=rs843911152;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	31837033	31837132	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:30527309;1allele=C/T;version=Hapmap2;RS=rs830781571;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31913548	31913647	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:30598733;1allele=C/T;version=Hapmap2;RS=rs130020882;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31917215	31917314	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:30602400;1allele=T/C;version=Hapmap2;RS=rs277718704;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	31918064	31918163	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:30603249;1allele=A/C;version=Hapmap2;RS=rs815042536;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	31933537	31933636	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:30618725;1allele=C/T;version=Hapmap2;RS=rs817268347;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	31933644	31933743	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:30618832;1allele=C/T;version=Hapmap2;RS=rs815500561;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	31934008	31934107	.	+	.	Name=Days_to_silk;B73v2_pos=5:30619196;1allele=G/A;version=Hapmap2;RS=rs834686757;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	31934008	31934107	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:30619196;1allele=G/A;version=Hapmap2;RS=rs834686757;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	31937696	31937795	.	+	.	Name=Total_amino_acids;B73v2_pos=5:30622884;1allele=G/A;version=Hapmap2;RS=rs130020927;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	31938135	31938234	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:30623323;1allele=G/T;version=Hapmap2;RS=rs130020932;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	31981856	31981955	.	+	.	Name=Leaf_width;B73v2_pos=5:30666008;1allele=C/T;version=Hapmap2;RS=rs1062074396;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	32026088	32026187	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:30710236;1allele=C/T;version=Hapmap2;RS=rs847169280;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	32053319	32053418	.	+	.	Name=Leaf_width;B73v2_pos=5:30734656;1allele=G/A;version=Hapmap2;RS=rs1064552709;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	32068333	32068432	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:30749673;1allele=T/G;version=Hapmap2;RS=rs809851740;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	32159583	32159682	.	+	.	Name=Days_to_silk;B73v2_pos=5:30841094;1allele=C/T;version=Hapmap2;RS=rs130021233;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	32266168	32266267	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:30941875;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	32269686	32269785	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:30945390;1allele=A/G;version=Hapmap2;RS=rs816562251;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	32276412	32276511	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:30952116;1allele=C/T;version=Hapmap2;RS=rs277719520;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	32333928	32334027	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:31006823;1allele=C/A;version=Hapmap2;RS=rs846052226;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	32350253	32350352	.	+	.	Name=Leaf_width;B73v2_pos=5:31022963;1allele=C/A;version=Hapmap2;RS=rs277720030;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	32438699	32438798	.	+	.	Name=Days_to_silk;B73v2_pos=5:31112062;1allele=A/G;version=Hapmap2;RS=rs1062567943;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	32456698	32456797	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:31130061;1allele=G/A;version=Hapmap2;RS=rs842948536;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	32459158	32459257	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:31132521;1allele=G/T;version=Hapmap2;RS=rs847791772;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	32811591	32811690	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:31425293;1allele=A/G;version=Hapmap2;RS=rs830189441;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	32814633	32814732	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:31428335;1allele=G/A;version=Hapmap2;RS=rs277720943;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	32818527	32818626	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:31432230;1allele=C/T;version=Hapmap1;RS=rs131509320;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	32876370	32876469	.	+	.	Name=Leaf_width;B73v2_pos=5:31467770;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	32989025	32989124	.	+	.	Name=Leaf_width;B73v2_pos=5:31604258;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33015343	33015442	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:31630722;1allele=T/G;version=Hapmap2;RS=rs812804547;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	33037048	33037147	.	+	.	Name=Leaf_width;B73v2_pos=5:31651266;1allele=C/A;version=Hapmap1;RS=rs130022305;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	33037906	33038005	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:31652124;1allele=G/A;version=Hapmap2;RS=rs838857442;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	33038459	33038558	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31652677;1allele=T/C;version=Hapmap2;RS=rs844230060;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	33043588	33043687	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31657806;1allele=A/T;version=Hapmap2;RS=rs130022338;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	33046746	33046845	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31660958;1allele=C/T;version=Hapmap2;RS=rs130022370;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	33058258	33058357	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31672401;1allele=C/G;version=Hapmap2;RS=rs277721439;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	33063523	33063622	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31677667;1allele=G/A;version=Hapmap2;RS=rs130022469;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	33069877	33069976	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31684021;1allele=C/T;version=Hapmap2;RS=rs130022477;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	33069886	33069985	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31684030;1allele=C/T;version=Hapmap2;RS=rs130022478;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	33075135	33075234	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31689279;1allele=G/T;version=Hapmap2;RS=rs277721512;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	33079193	33079292	.	+	.	Name=Leaf_width;B73v2_pos=5:31693337;1allele=A/C;version=Hapmap2;RS=rs277721578;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	33122352	33122451	.	+	.	Name=Leaf_width;B73v2_pos=5:31737915;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33153110	33153209	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31765768;1allele=A/T;version=Hapmap2;RS=rs1062782537;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	33161760	33161859	.	+	.	Name=Leaf_width;B73v2_pos=5:31774417;1allele=T/C;version=Hapmap2;RS=rs1064762467;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	33208088	33208187	.	+	.	Name=Leaf_width;B73v2_pos=5:31821251;1allele=G/A;version=Hapmap2;RS=rs277721965;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33219955	33220054	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31833118;1allele=C/G;version=Hapmap2;RS=rs833879493;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	33222162	33222261	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:31835325;1allele=C/T;version=Hapmap2;RS=rs131509603;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	33222162	33222261	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:31835325;1allele=C/T;version=Hapmap2;RS=rs131509603;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	33222295	33222394	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:31835458;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33239704	33239803	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:31853344;1allele=G/A;version=Hapmap2;RS=rs823019581;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	33241474	33241573	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:31855115;1allele=T/C;version=Hapmap2;RS=rs277722279;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	33241630	33241729	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:31855271;1allele=G/T;version=Hapmap2;RS=rs277722290;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	33243963	33244062	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:31857604;1allele=C/T;version=Hapmap2;RS=rs823546624;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	33247204	33247303	.	+	.	Name=Total_amino_acids;B73v2_pos=5:31860845;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33268748	33268847	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:31882389;1allele=A/C;version=Hapmap2;RS=rs845103079;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	33286632	33286731	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:31900089;1allele=G/A;version=Hapmap2;RS=rs1061544278;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33302771	33302870	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:31916228;1allele=A/G;version=Hapmap2;RS=rs277722522;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33347772	33347871	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:31928638;1allele=A/G;version=Hapmap2;RS=rs277722533;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33362120	33362219	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:31942987;1allele=A/G;version=Hapmap2;RS=rs277722537;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33367026	33367125	.	+	.	Name=Leaf_width;B73v2_pos=5:31947822;1allele=C/A;version=Hapmap2;RS=rs277722553;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33413308	33413407	.	+	.	Name=Leaf_width;B73v2_pos=5:31983355;1allele=C/T;version=Hapmap2;RS=rs1064124521;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	33427648	33427747	.	+	.	Name=Leaf_width;B73v2_pos=5:31997695;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33442958	33443057	.	+	.	Name=Leaf_width;B73v2_pos=5:32013005;1allele=T/A;version=Hapmap2;RS=rs1062429409;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	33495872	33495971	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:32083639;1allele=A/T;version=Hapmap2;RS=rs815355186;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	33532558	33532657	.	+	.	Name=Days_to_silk;B73v2_pos=5:32117225;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33548184	33548283	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:32132852;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33552735	33552834	.	+	.	Name=Leaf_width;B73v2_pos=5:32137403;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33669951	33670050	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:32253736;1allele=A/G;version=Hapmap2;RS=rs130023733;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33677667	33677766	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:32261453;1allele=G/T;version=Hapmap2;RS=rs277723379;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	33677734	33677833	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:32261520;1allele=A/T;version=Hapmap2;RS=rs277723380;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	33677803	33677902	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:32261589;1allele=C/A;version=Hapmap2;RS=rs816112121;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	33747660	33747759	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:32331706;1allele=G/A;version=Hapmap2;RS=rs844455913;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	33769111	33769210	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:32353158;1allele=G/A;version=Hapmap2;RS=rs277723418;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	33841575	33841674	.	+	.	Name=Leaf_width;B73v2_pos=5:32424739;1allele=C/A;version=Hapmap2;RS=rs277723477;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	33899802	33899901	.	+	.	Name=Days_to_silk;B73v2_pos=5:32478680;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	33995147	33995246	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:32594552;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	34155393	34155492	.	+	.	Name=Leaf_width;B73v2_pos=5:32714635;1allele=C/T;version=Hapmap2;RS=rs821996691;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	34337253	34337352	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:32901156;1allele=A/T;version=Hapmap2;RS=rs818898112;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	34427095	34427194	.	+	.	Name=Leaf_width;B73v2_pos=5:32986972;1allele=G/A;version=Hapmap2;RS=rs824978031;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	34491210	34491309	.	+	.	Name=Total_amino_acids;B73v2_pos=5:33049160;1allele=C/G;version=Hapmap2;RS=rs130024676;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	34513850	34513949	.	+	.	Name=Total_amino_acids;B73v2_pos=5:33071059;1allele=C/T;version=Hapmap2;RS=rs850103289;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	34581269	34581368	.	+	.	Name=Leaf_length;B73v2_pos=5:33138703;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	34657257	34657356	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:33209237;1allele=T/C;version=Hapmap2;RS=rs130025150;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	34703661	34703760	.	+	.	Name=Plant_height;B73v2_pos=5:33255643;1allele=C/T;version=Hapmap2;RS=rs130025301;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	34703661	34703760	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:33255643;1allele=C/T;version=Hapmap2;RS=rs130025301;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	34706004	34706103	.	+	.	Name=Plant_height;B73v2_pos=5:33257986;1allele=A/G;version=Hapmap2;RS=rs834599031;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	34754963	34755062	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:33306875;1allele=G/A;version=Hapmap2;RS=rs842871373;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	34755313	34755412	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:33307225;1allele=G/A;version=Hapmap2;RS=rs130025615;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	34755313	34755412	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:33307225;1allele=G/A;version=Hapmap2;RS=rs130025615;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	34756109	34756208	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:33308021;1allele=G/A;version=Hapmap2;RS=rs814977818;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	34756394	34756493	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:33308306;1allele=A/G;version=Hapmap2;RS=rs828987578;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	34882127	34882226	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:33440628;1allele=A/G;version=Hapmap2;RS=rs727391750;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	34883354	34883453	.	+	.	Name=Plant_height;B73v2_pos=5:33441855;1allele=C/G;version=Hapmap2;RS=rs1064492951;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	35778858	35778957	.	+	.	Name=Height_above_ear;B73v2_pos=5:34352842;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	35958590	35958689	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:34532181;1allele=C/T;version=Hapmap2;RS=rs806410512;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	36177244	36177343	.	+	.	Name=Glucose;B73v2_pos=5:34747515;1allele=T/C;version=Hapmap2;RS=rs803419690;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	36242664	36242763	.	+	.	Name=Plant_height;B73v2_pos=5:34805623;1allele=A/G;version=Hapmap2;RS=rs725054938;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	36255022	36255121	.	+	.	Name=Starch;B73v2_pos=5:34837358;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	36293531	36293630	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:34863969;1allele=C/T;version=Hapmap2;RS=rs277727802;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	36317589	36317688	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:34883335;1allele=T/C;version=Hapmap2;RS=rs836514710;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	36393860	36393959	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:34937745;1allele=A/G;version=Hapmap2;RS=rs833359189;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	36394006	36394105	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:34937891;1allele=A/G;version=Hapmap2;RS=rs724206742;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	36394750	36394849	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:34938635;1allele=C/G;version=Hapmap2;RS=rs831586755;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	36398221	36398320	.	+	.	Name=Plant_height;B73v2_pos=5:34942106;1allele=C/T;version=Hapmap2;RS=rs724341382;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	36400526	36400625	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:34944411;1allele=A/G;version=Hapmap2;RS=rs817662484;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	36403308	36403407	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:34947193;1allele=A/G;version=Hapmap2;RS=rs130028746;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	36405102	36405201	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:34948987;1allele=G/A;version=Hapmap2;RS=rs831201636;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	36425001	36425100	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:34968896;1allele=T/A;version=Hapmap2;RS=rs808709722;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	36498454	36498553	.	+	.	Name=Total_amino_acids;B73v2_pos=5:35042620;1allele=T/C;version=Hapmap2;RS=rs130028954;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	36672129	36672228	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:35223949;1allele=C/T;version=Hapmap2;RS=rs813819415;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	36688857	36688956	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:35241673;1allele=C/T;version=Hapmap2;RS=rs827960819;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	36728059	36728158	.	+	.	Name=Malate;B73v2_pos=5:35280883;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	36731063	36731162	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:35283887;1allele=C/T;version=Hapmap2;RS=rs1061158503;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	36925553	36925652	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:35477142;1allele=T/A;version=Hapmap2;RS=rs840503372;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	37059246	37059345	.	+	.	Name=Height_above_ear;B73v2_pos=5:35615575;1allele=A/G;version=Hapmap2;RS=rs845181561;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	37077812	37077911	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:35634141;1allele=C/T;version=Hapmap2;RS=rs1061063465;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	37483868	37483967	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:36048036;1allele=C/G;version=Hapmap1;RS=rs130029377;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	37532548	37532647	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:36096933;1allele=T/G;version=Hapmap1;RS=rs131511999;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	37745568	37745667	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:36324338;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	37921056	37921155	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:36496958;1allele=A/G;version=Hapmap1;RS=rs130029608;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	38070753	38070852	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:36644049;1allele=G/A;version=Hapmap2;RS=rs724470086;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	38071117	38071216	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:36644413;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	38197655	38197754	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:36769820;1allele=A/C;version=Hapmap2;RS=rs824383281;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	38374014	38374113	.	+	.	Name=Total_amino_acids;B73v2_pos=5:36944785;1allele=C/T;version=Hapmap2;RS=rs130029891;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	38403008	38403107	.	+	.	Name=Total_amino_acids;B73v2_pos=5:36973777;1allele=G/A;version=Hapmap2;RS=rs835729842;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	38444102	38444201	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:37015474;1allele=A/G;version=Hapmap2;RS=rs839191245;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	38462000	38462099	.	+	.	Name=Plant_height;B73v2_pos=5:37033374;1allele=C/T;version=Hapmap2;RS=rs277730337;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	38529917	38530016	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:37101321;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	38598638	38598737	.	+	.	Name=Ear_height;B73v2_pos=5:37168976;1allele=C/G;version=Hapmap2;RS=rs1062723778;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	38685473	38685572	.	+	.	Name=Total_amino_acids;B73v2_pos=5:37255812;1allele=A/G;version=Hapmap2;RS=rs724995783;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	38694643	38694742	.	+	.	Name=Leaf_length;B73v2_pos=5:37264982;1allele=A/G;version=Hapmap2;RS=rs130030386;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	38727331	38727430	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:37297670;1allele=A/T;version=Hapmap2;RS=rs848221737;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	38822241	38822340	.	+	.	Name=Total_amino_acids;B73v2_pos=5:37372733;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	38855497	38855596	.	+	.	Name=Total_amino_acids;B73v2_pos=5:37428651;1allele=T/C;version=Hapmap2;RS=rs277731456;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	38918360	38918459	.	+	.	Name=Glucose;B73v2_pos=5:37484790;1allele=C/T;version=Hapmap2;RS=rs1061432979;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	39100192	39100291	.	+	.	Name=Leaf_length;B73v2_pos=5:37635091;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	39138704	39138803	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:37721370;1allele=G/A;version=Hapmap2;RS=rs808729675;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	39170011	39170110	.	+	.	Name=Ear_height;B73v2_pos=5:37752382;1allele=A/T;version=Hapmap2;RS=rs277732194;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	39219923	39220022	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:37802399;1allele=T/G;version=Hapmap2;RS=rs826213343;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	39253375	39253474	.	+	.	Name=Total_amino_acids;B73v2_pos=5:37835849;1allele=T/A;version=Hapmap2;RS=rs277732439;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	39338984	39339083	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:37923444;1allele=C/T;version=Hapmap2;RS=rs130030812;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	39338984	39339083	.	+	.	Name=Plant_height;B73v2_pos=5:37923444;1allele=C/T;version=Hapmap2;RS=rs130030812;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	39344002	39344101	.	+	.	Name=Total_amino_acids;B73v2_pos=5:37928462;1allele=C/T;version=Hapmap2;RS=rs130030838;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	39420436	39420535	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:38029316;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	39427278	39427377	.	+	.	Name=Plant_height;B73v2_pos=5:38036740;1allele=T/C;version=Hapmap2;RS=rs725530207;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	39430273	39430372	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:38039735;1allele=A/G;version=Hapmap2;RS=rs1064557465;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	39500852	39500949	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:38130899;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	39501752	39501851	.	+	.	Name=Glucose;B73v2_pos=5:38129992;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	39546453	39546552	.	+	.	Name=Total_amino_acids;B73v2_pos=5:38005081;1allele=G/A;version=Hapmap2;RS=rs823872427;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	39567695	39567794	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:38137407;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	39585242	39585341	.	+	.	Name=Total_amino_acids;B73v2_pos=5:38155726;1allele=T/C;version=Hapmap2;RS=rs130031338;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	40146919	40147018	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:38646509;1allele=T/C;version=Hapmap2;RS=rs820739076;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	40173854	40173953	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:38673442;1allele=T/C;version=Hapmap2;RS=rs811910382;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	40209104	40209203	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:38708692;1allele=T/C;version=Hapmap2;RS=rs832861173;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	40307154	40307253	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:38802664;1allele=C/T;version=Hapmap2;RS=rs725164735;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	40308772	40308871	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:38804281;1allele=T/C;version=Hapmap2;RS=rs823944120;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	40308772	40308871	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:38804281;1allele=T/C;version=Hapmap2;RS=rs823944120;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	40313423	40313522	.	+	.	Name=Plant_height;B73v2_pos=5:38808932;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	40324325	40324424	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:38819961;1allele=A/C;version=Hapmap2;RS=rs277734840;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	40565935	40566034	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:39075724;1allele=A/G;version=Hapmap2;RS=rs822432920;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	40565943	40566042	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:39075732;1allele=G/C;version=Hapmap2;RS=rs830463769;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	40599555	40599654	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:39112010;1allele=C/T;version=Hapmap2;RS=rs848786557;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	40623641	40623740	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:39136009;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	40633608	40633707	.	+	.	Name=Glucose;B73v2_pos=5:39145976;1allele=C/T;version=Hapmap2;RS=rs725427223;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	40765919	40766018	.	+	.	Name=Leaf_length;B73v2_pos=5:39276206;1allele=A/G;version=Hapmap1;RS=rs130032755;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	40893977	40894076	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:39399552;1allele=T/C;version=Hapmap2;RS=rs277735578;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	40907034	40907133	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:39412610;1allele=C/G;version=Hapmap2;RS=rs130032909;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	40952312	40952411	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39457713;1allele=C/T;version=Hapmap2;RS=rs130032928;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	40952537	40952636	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39457938;1allele=G/C;version=Hapmap2;RS=rs130032929;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	41108264	41108363	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39615601;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	41170682	41170781	.	+	.	Name=Days_to_silk;B73v2_pos=5:39678299;1allele=A/G;version=Hapmap2;RS=rs804630685;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	41293971	41294070	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39797407;1allele=C/T;version=Hapmap2;RS=rs801531168;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	41317280	41317379	.	+	.	Name=Plant_height;B73v2_pos=5:39820586;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	41318176	41318275	.	+	.	Name=Plant_height;B73v2_pos=5:39821482;1allele=A/C;version=Hapmap2;RS=rs844508954;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	41318423	41318522	.	+	.	Name=Plant_height;B73v2_pos=5:39821729;1allele=T/C;version=Hapmap2;RS=rs1063019073;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	41319528	41319627	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:39822834;1allele=T/C;version=Hapmap2;RS=rs818377659;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	41335791	41335890	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:39848790;1allele=A/G;version=Hapmap2;RS=rs831068960;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	41336001	41336100	.	+	.	Name=Plant_height;B73v2_pos=5:39849000;1allele=C/T;version=Hapmap2;RS=rs829487702;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	41352644	41352743	.	+	.	Name=Plant_height;B73v2_pos=5:39870703;1allele=A/G;version=Hapmap2;RS=rs1062335776;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	41357063	41357162	.	+	.	Name=Plant_height;B73v2_pos=5:39875122;1allele=C/G;version=Hapmap2;RS=rs131513856;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	41357529	41357628	.	+	.	Name=Plant_height;B73v2_pos=5:39875588;1allele=A/C;version=Hapmap2;RS=rs277735943;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	41357529	41357628	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:39875588;1allele=A/C;version=Hapmap2;RS=rs277735943;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	41363626	41363725	.	+	.	Name=Plant_height;B73v2_pos=5:39881685;1allele=G/C;version=Hapmap2;RS=rs277735948;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	41363974	41364073	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39882033;1allele=G/C;version=Hapmap2;RS=rs277735949;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	41366853	41366952	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:39884912;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	41370039	41370138	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39888098;1allele=G/A;version=Hapmap2;RS=rs1062831256;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	41370322	41370421	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39888381;1allele=T/C;version=Hapmap2;RS=rs1064210555;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	41372773	41372872	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:39890832;1allele=C/T;version=Hapmap2;RS=rs1061204029;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	41690070	41690169	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:40203766;1allele=C/T;version=Hapmap2;RS=rs848838673;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	41694112	41694211	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:40207808;1allele=A/T;version=Hapmap2;RS=rs841719181;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	41695516	41695615	.	+	.	Name=Height_above_ear;B73v2_pos=5:40209212;1allele=T/C;version=Hapmap2;RS=rs724723435;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	41752483	41752583	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:40276791;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	41776263	41776362	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:40302754;1allele=A/G;version=Hapmap2;RS=rs825483412;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	42009698	42009797	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:40521950;1allele=G/A;version=Hapmap2;RS=rs843510622;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	42098438	42098537	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:40617448;1allele=T/A;version=Hapmap2;RS=rs801619190;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	42236732	42236831	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:40759234;1allele=T/C;version=Hapmap2;RS=rs838013936;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	42307805	42307904	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:40832347;1allele=A/G;version=Hapmap2;RS=rs847909373;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	42335748	42335847	.	+	.	Name=Stalk_strength;B73v2_pos=5:40882406;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	42517167	42517266	.	+	.	Name=Stalk_strength;B73v2_pos=5:41047774;1allele=G/A;version=Hapmap2;RS=rs724449206;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	42553669	42553768	.	+	.	Name=Stalk_strength;B73v2_pos=3:22950771;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	43018283	43018382	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:41551177;1allele=A/G;version=Hapmap2;RS=rs1063158215;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	43018434	43018533	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:41551328;1allele=C/T;version=Hapmap2;RS=rs1063219996;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	43033615	43033714	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:41566510;1allele=C/T;version=Hapmap2;RS=rs820760407;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	43158006	43158105	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:41689131;1allele=A/C;version=Hapmap2;RS=rs813828892;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	43158016	43158115	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:41689141;1allele=C/T;version=Hapmap2;RS=rs806380604;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	43223648	43223747	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:41754666;1allele=T/C;version=Hapmap2;RS=rs821138393;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	43626725	43626824	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:42123658;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	43626725	43626824	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:42123658;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	43637070	43637169	.	+	.	Name=Stalk_strength;B73v2_pos=5:42149650;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	43681106	43681205	.	+	.	Name=Stalk_strength;B73v2_pos=5:42195150;1allele=G/C;version=Hapmap2;RS=rs811770358;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	43742303	43742402	.	+	.	Name=Stalk_strength;B73v2_pos=5:42250415;1allele=G/A;version=Hapmap2;RS=rs804935025;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	43789402	43789501	.	+	.	Name=Stalk_strength;B73v2_pos=5:42297192;1allele=TACTAC/;version=Hapmap1;RS=rs726899310;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	43902971	43903070	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:42410754;1allele=C/T;version=Hapmap2;RS=rs802809587;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	43915905	43916004	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:42423688;1allele=G/A;version=Hapmap2;RS=rs277736757;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	44242469	44242568	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:42746685;1allele=G/A;version=Hapmap2;RS=rs277737202;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	44350687	44350786	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:42851298;1allele=G/A;version=Hapmap2;RS=rs727186545;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	44364837	44364936	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:42865448;1allele=T/C;version=Hapmap2;RS=rs844873113;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	44524604	44524703	.	+	.	Name=Glucose;B73v2_pos=5:43025352;1allele=T/G;version=Hapmap1;RS=rs131515332;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	45313537	45313636	.	+	.	Name=Plant_height;B73v2_pos=5:43802831;1allele=A/G;version=Hapmap2;RS=rs827991140;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	45313537	45313636	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:43802831;1allele=A/G;version=Hapmap2;RS=rs827991140;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	45761544	45761643	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:44244838;1allele=A/T;version=Hapmap2;RS=rs277739663;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	46045793	46045892	.	+	.	Name=Stalk_strength;B73v2_pos=5:44530117;1allele=T/A;version=Hapmap2;RS=rs727375028;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	46232532	46232631	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:44721734;1allele=G/A;version=Hapmap2;RS=rs827249887;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	47010419	47010518	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:45473326;1allele=A/G;version=Hapmap2;RS=rs818903971;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	47262120	47262219	.	+	.	Name=Plant_height;B73v2_pos=5:45734792;1allele=A/C;version=Hapmap1;RS=rs131516354;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	47436889	47436988	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:45909086;1allele=+/-;version=Hapmap2;RS=rs277741204;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	47602991	47603090	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:45974710;1allele=C/T;version=Hapmap2;RS=rs726503486;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	47604682	47604781	.	+	.	Name=Leaf_width;B73v2_pos=5:45976401;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	47672221	47672320	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:45998371;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	47686460	47686559	.	+	.	Name=Leaf_width;B73v2_pos=5:46043115;1allele=C/T;version=Hapmap2;RS=rs277741447;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	47687962	47688061	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:46044617;1allele=C/T;version=Hapmap2;RS=rs130036502;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	47714755	47714854	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:46069726;1allele=C/T;version=Hapmap2;RS=rs842555506;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	47714787	47714886	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:46069758;1allele=T/C;version=Hapmap2;RS=rs826305786;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	47716322	47716421	.	+	.	Name=Leaf_width;B73v2_pos=5:46071293;1allele=C/G;version=Hapmap2;RS=rs841937520;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	47728966	47729065	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:46083939;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	47747153	47747252	.	+	.	Name=Plant_height;B73v2_pos=5:46106578;1allele=G/T;version=Hapmap2;RS=rs817984571;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	47854470	47854569	.	+	.	Name=Sucrose;B73v2_pos=5:46202520;1allele=C/T;version=Hapmap2;RS=rs815467011;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	47856239	47856338	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:46204289;1allele=C/T;version=Hapmap2;RS=rs1063731040;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	47874701	47874800	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:46221691;1allele=G/A;version=Hapmap2;RS=rs815161700;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	47884804	47884903	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:46231460;1allele=C/T;version=Hapmap2;RS=rs804645945;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	47889858	47889957	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:46236514;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	47950380	47950479	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:46296468;1allele=C/A;version=Hapmap2;RS=rs836851716;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	47996894	47996993	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:46343673;1allele=G/A;version=Hapmap2;RS=rs849945222;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	48038880	48038935	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:46385659;1allele=G/A;version=Hapmap2;RS=rs815451669;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	48092909	48093008	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:46424011;1allele=C/T;version=Hapmap1;RS=rs131516540;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	48095869	48095968	.	+	.	Name=Plant_height;B73v2_pos=5:46426971;1allele=G/C;version=Hapmap1;RS=rs130036976;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	48396091	48396190	.	+	.	Name=Plant_height;B73v2_pos=5:46734887;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	48399633	48399732	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:46738431;1allele=A/G;version=Hapmap2;RS=rs828545772;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	48474143	48474242	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:46809988;1allele=C/T;version=Hapmap2;RS=rs277743014;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	48546652	48546751	.	+	.	Name=Plant_height;B73v2_pos=5:46883947;1allele=T/C;version=Hapmap2;RS=rs130037595;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	49245394	49245493	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:47559173;1allele=A/G;version=Hapmap1;RS=rs131517085;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	49864458	49864557	.	+	.	Name=Plant_height;B73v2_pos=5:48145544;1allele=C/G;version=Hapmap2;RS=rs808586493;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	49864458	49864557	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:48145544;1allele=C/G;version=Hapmap2;RS=rs808586493;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	49868309	49868408	.	+	.	Name=Plant_height;B73v2_pos=5:48149395;1allele=A/C;version=Hapmap2;RS=rs832966384;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	49939565	49939664	.	+	.	Name=Plant_height;B73v2_pos=5:48245219;1allele=C/T;version=Hapmap2;RS=rs803352616;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	50006485	50006584	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:48301516;1allele=C/T;version=Hapmap2;RS=rs277745229;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	50090405	50090504	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:48389961;1allele=A/G;version=Hapmap2;RS=rs277745505;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	50090586	50090685	.	+	.	Name=Plant_height;B73v2_pos=5:48390142;1allele=TC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	50130543	50130642	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:48424365;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	50131958	50132057	.	+	.	Name=Leaf_width;B73v2_pos=5:48422950;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	50202004	50202103	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:48502300;1allele=A/T;version=Hapmap2;RS=rs726158677;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	50327031	50327130	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:48626212;1allele=T/C;version=Hapmap2;RS=rs803706476;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	50338439	50338538	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:48642040;1allele=G/A;version=Hapmap2;RS=rs277745843;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	50375022	50375121	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:48678802;1allele=G/A;version=Hapmap2;RS=rs726512903;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	50376616	50376715	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:48680396;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	50376686	50376785	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:48680466;1allele=CGTC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	50377961	50378060	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:48681741;1allele=G/A;version=Hapmap2;RS=rs727186916;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	50501677	50501776	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:48804011;1allele=C/T;version=Hapmap2;RS=rs1062236664;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	50573963	50574062	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:48871442;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	50574208	50574307	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:48871687;1allele=A/G;version=Hapmap2;RS=rs130040234;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	50574261	50574360	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:48871740;1allele=G/T;version=Hapmap2;RS=rs801722118;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	50574325	50574424	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:48871804;1allele=A/G;version=Hapmap2;RS=rs805421955;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	50575489	50575588	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:48872968;1allele=C/T;version=Hapmap2;RS=rs836704865;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	50576983	50577082	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:48874462;1allele=T/C;version=Hapmap2;RS=rs810764849;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	51502072	51502171	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:49835024;1allele=A/G;version=Hapmap2;RS=rs277746472;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	51564393	51564492	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:49897360;1allele=T/C;version=Hapmap2;RS=rs814875443;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	51663209	51663308	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:49982280;1allele=G/A;version=Hapmap2;RS=rs838585391;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	52150328	52150427	.	+	.	Name=Sucrose;B73v2_pos=3:17102458;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	52256637	52256736	.	+	.	Name=Ear_row_number;B73v2_pos=5:50578999;1allele=G/A;version=Hapmap2;RS=rs131518826;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	52345823	52345922	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:50668370;1allele=C/T;version=Hapmap2;RS=rs840835816;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	52804135	52804234	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:51111688;1allele=T/A;version=Hapmap2;RS=rs820843945;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	53127494	53127593	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:51427365;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	53562492	53562591	.	+	.	Name=Total_amino_acids;B73v2_pos=5:51865493;1allele=G/C;version=Hapmap2;RS=rs726293397;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	54400238	54400337	.	+	.	Name=Total_amino_acids;B73v2_pos=5:52629705;1allele=G/A;version=Hapmap2;RS=rs130042405;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	55162122	55162221	.	+	.	Name=Days_to_silk;B73v2_pos=5:53426744;1allele=A/T;version=Hapmap2;RS=rs845589965;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	57158626	57158725	.	+	.	Name=Height_above_ear;B73v2_pos=5:55355542;1allele=C/A;version=Hapmap2;RS=rs850303240;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	57159936	57160035	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:55356852;1allele=C/T;version=Hapmap2;RS=rs277751986;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	57160375	57160474	.	+	.	Name=Height_above_ear;B73v2_pos=5:55357291;1allele=C/T;version=Hapmap2;RS=rs842511411;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	57163247	57163346	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:55360163;1allele=C/T;version=Hapmap2;RS=rs830580503;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	57194848	57194947	.	+	.	Name=Cob_diameter;B73v2_pos=5:55391762;1allele=/TTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	57231366	57231465	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:55428286;1allele=A/G;version=Hapmap2;RS=rs849374552;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	57862037	57862136	.	+	.	Name=Leaf_length;B73v2_pos=5:56019712;1allele=A/G;version=Hapmap2;RS=rs844482458;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	57897001	57897100	.	+	.	Name=Cob_diameter;B73v2_pos=5:56043092;1allele=T/C;version=Hapmap2;RS=rs802760015;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	58001033	58001132	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:56158471;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	58155796	58155895	.	+	.	Name=Cob_diameter;B73v2_pos=5:56310085;1allele=A/C;version=Hapmap2;RS=rs811171208;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	58207029	58207128	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:56361141;1allele=T/C;version=Hapmap2;RS=rs130046935;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	58212617	58212716	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:56366729;1allele=A/G;version=Hapmap2;RS=rs277752840;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	58215283	58215382	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:56369395;1allele=T/G;version=Hapmap1;RS=rs131522189;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	58312381	58312480	.	+	.	Name=Ear_row_number;B73v2_pos=5:56465670;1allele=T/C;version=Hapmap2;RS=rs277753070;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	58640371	58640470	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:56781646;1allele=C/A;version=Hapmap2;RS=rs812150915;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	58640371	58640470	.	+	.	Name=Days_to_silk;B73v2_pos=5:56781646;1allele=C/A;version=Hapmap2;RS=rs812150915;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	58640990	58641089	.	+	.	Name=Ear_row_number;B73v2_pos=5:56782265;1allele=C/T;version=Hapmap2;RS=rs831459539;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	58687805	58687904	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:56826433;1allele=A/G;version=Hapmap2;RS=rs1060939125;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	58761168	58761267	.	+	.	Name=Ear_row_number;B73v2_pos=5:56901755;1allele=G/A;version=Hapmap2;RS=rs130047446;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	58802817	58802916	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:56937337;1allele=A/C;version=Hapmap2;RS=rs849440736;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	59757254	59757353	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:57940173;1allele=T/C;version=Hapmap2;RS=rs814387601;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	59757320	59757419	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:57940239;1allele=A/G;version=Hapmap2;RS=rs838128146;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	59873778	59873877	.	+	.	Name=Tassel_length;B73v2_pos=5:58062825;1allele=A/G;version=Hapmap2;RS=rs727453449;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	59922361	59922460	.	+	.	Name=Tassel_length;B73v2_pos=5:58111291;1allele=T/C;version=Hapmap2;RS=rs824224961;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	59936099	59936198	.	+	.	Name=Tassel_length;B73v2_pos=5:58125029;1allele=T/C;version=Hapmap2;RS=rs819912990;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	59948319	59948418	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:58137252;1allele=A/G;version=Hapmap2;RS=rs131523468;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	60340764	60340863	.	+	.	Name=Tassel_length;B73v2_pos=5:58524646;1allele=G/A;version=Hapmap2;RS=rs845579924;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	60422395	60422494	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:58615965;1allele=A/G;version=Hapmap2;RS=rs277757646;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	60440334	60440433	.	+	.	Name=Tassel_length;B73v2_pos=5:58633904;1allele=A/G;version=Hapmap2;RS=rs1064589859;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	60451366	60451465	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:58644937;1allele=G/A;version=Hapmap2;RS=rs832976458;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	60546950	60547049	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:58782907;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	60580331	60580430	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:58724037;1allele=A/G;version=Hapmap2;RS=rs277757775;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	60904292	60904391	.	+	.	Name=Tassel_length;B73v2_pos=5:59064876;1allele=C/T;version=Hapmap2;RS=rs812953189;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	61148457	61148556	.	+	.	Name=Glucose;B73v2_pos=5:59308833;1allele=G/A;version=Hapmap2;RS=rs277758765;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	61329845	61329944	.	+	.	Name=Height_above_ear;B73v2_pos=5:59485262;1allele=C/T;version=Hapmap2;RS=rs837248914;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	61329851	61329950	.	+	.	Name=Height_above_ear;B73v2_pos=5:59485268;1allele=C/T;version=Hapmap2;RS=rs807184150;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	61329873	61329972	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:59485290;1allele=C/T;version=Hapmap2;RS=rs130049134;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	61451973	61452072	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:59605768;1allele=C/A;version=Hapmap2;RS=rs277759162;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	61454170	61454269	.	+	.	Name=Plant_height;B73v2_pos=5:59607965;1allele=T/C;version=Hapmap2;RS=rs824725646;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	61479646	61479745	.	+	.	Name=Plant_height;B73v2_pos=5:59629607;1allele=C/T;version=Hapmap2;RS=rs277759229;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	61583688	61583787	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:59724233;1allele=G/C;version=Hapmap2;RS=rs725545718;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	61588859	61588958	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:59729404;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	61609152	61609251	.	+	.	Name=Ear_height;B73v2_pos=5:59749694;1allele=T/C;version=Hapmap2;RS=rs837300652;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	61638597	61638696	.	+	.	Name=Total_amino_acids;B73v2_pos=5:59782741;1allele=A/G;version=Hapmap2;RS=rs847721750;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	61667118	61667217	.	+	.	Name=Cob_diameter;B73v2_pos=5:59807318;1allele=G/C;version=Hapmap2;RS=rs277759419;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	61704089	61704188	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:59884774;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	61836161	61836260	.	+	.	Name=Plant_height;B73v2_pos=5:59976039;1allele=G/T;version=Hapmap2;RS=rs817246243;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	61903533	61903632	.	+	.	Name=Leaf_width;B73v2_pos=5:60043254;1allele=C/T;version=Hapmap2;RS=rs836887338;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	61935510	61935609	.	+	.	Name=Leaf_length;B73v2_pos=5:60075230;1allele=TT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	61996550	61996649	.	+	.	Name=Plant_height;B73v2_pos=5:60133164;1allele=C/A;version=Hapmap2;RS=rs830992742;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	62036334	62036433	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:60172853;1allele=T/C;version=Hapmap2;RS=rs811936380;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	62340256	62340355	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:60453117;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	62389511	62389610	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:60523150;1allele=T/C;version=Hapmap2;RS=rs820800532;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	62392249	62392348	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:60525888;1allele=T/C;version=Hapmap2;RS=rs817390240;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	62397448	62397547	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:60531087;1allele=T/G;version=Hapmap2;RS=rs810295087;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	62404014	62404113	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:60537656;1allele=T/G;version=Hapmap2;RS=rs724947809;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	62407182	62407281	.	+	.	Name=Leaf_width;B73v2_pos=5:60540824;1allele=G/A;version=Hapmap2;RS=rs277760414;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	62477102	62477201	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:60613158;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	62477580	62477679	.	+	.	Name=Leaf_width;B73v2_pos=5:60612680;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	62516838	62516937	.	+	.	Name=Leaf_width;B73v2_pos=5:60674622;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	62517413	62517512	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:60674047;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	62518929	62519028	.	+	.	Name=Leaf_width;B73v2_pos=5:60672440;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	62547907	62548006	.	+	.	Name=Plant_height;B73v2_pos=5:60679957;1allele=C/T;version=Hapmap2;RS=rs277760810;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	62571803	62571902	.	+	.	Name=Plant_height;B73v2_pos=5:60703854;1allele=A/G;version=Hapmap2;RS=rs277760848;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	62632881	62632980	.	+	.	Name=Plant_height;B73v2_pos=5:60763431;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	62677461	62677560	.	+	.	Name=Leaf_width;B73v2_pos=5:60808012;1allele=C/T;version=Hapmap2;RS=rs277761108;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	62896788	62896887	.	+	.	Name=Days_to_silk;B73v2_pos=5:61019381;1allele=C/T;version=Hapmap2;RS=rs838571531;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	62896788	62896887	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:61019381;1allele=C/T;version=Hapmap2;RS=rs838571531;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	62951751	62951850	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:61076429;1allele=C/T;version=Hapmap1;RS=rs131526126;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	62951751	62951850	.	+	.	Name=Plant_height;B73v2_pos=5:61076429;1allele=C/T;version=Hapmap1;RS=rs131526126;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	62952715	62952814	.	+	.	Name=Plant_height;B73v2_pos=5:61077393;1allele=A/G;version=Hapmap2;RS=rs277761381;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	62958782	62958881	.	+	.	Name=Leaf_length;B73v2_pos=5:61083460;1allele=G/A;version=Hapmap1;RS=rs131526146;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	62971363	62971462	.	+	.	Name=Leaf_length;B73v2_pos=5:61096292;1allele=C/T;version=Hapmap2;RS=rs1063372369;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	63042687	63042786	.	+	.	Name=Days_to_silk;B73v2_pos=5:61206076;1allele=A/G;version=Hapmap2;RS=rs803168152;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	63045415	63045514	.	+	.	Name=Leaf_length;B73v2_pos=5:61208807;1allele=T/C;version=Hapmap2;RS=rs837335239;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	63184066	63184165	.	+	.	Name=Total_amino_acids;B73v2_pos=5:61404402;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	63259324	63259423	.	+	.	Name=Ear_row_number;B73v2_pos=5:61516168;1allele=C/T;version=Hapmap2;RS=rs131526308;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	63393182	63393281	.	+	.	Name=Ear_row_number;B73v2_pos=5:61541098;1allele=G/A;version=Hapmap2;RS=rs1063337518;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	63490583	63490682	.	+	.	Name=Ear_row_number;B73v2_pos=5:61672319;1allele=A/T;version=Hapmap2;RS=rs55623865;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	63517518	63517617	.	+	.	Name=Ear_height;B73v2_pos=5:61699193;1allele=+/-;version=Hapmap2;RS=rs849589662;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	63572869	63572968	.	+	.	Name=Leaf_length;B73v2_pos=5:61755074;1allele=T/C;version=Hapmap2;RS=rs277762138;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	63614133	63614232	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:61796762;1allele=T/G;version=Hapmap2;RS=rs726816730;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	63621156	63621255	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:61803785;1allele=A/G;version=Hapmap2;RS=rs277762342;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	63650150	63650249	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:61832786;1allele=A/G;version=Hapmap2;RS=rs277762406;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	63777923	63778022	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:61957503;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	63922807	63922906	.	+	.	Name=Total_amino_acids;B73v2_pos=5:62113586;1allele=T/G;version=Hapmap2;RS=rs131526904;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	63924289	63924388	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:62115068;1allele=C/T;version=Hapmap2;RS=rs277762623;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	64003591	64003690	.	+	.	Name=Leaf_width;B73v2_pos=5:62199996;1allele=A/G;version=Hapmap1;RS=rs277762704;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	64003610	64003709	.	+	.	Name=Leaf_width;B73v2_pos=5:62200015;1allele=A/C;version=Hapmap1;RS=rs55625318;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	64630444	64630543	.	+	.	Name=Glucose;B73v2_pos=5:62752797;1allele=A/G;version=Hapmap2;RS=rs837569579;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	64796594	64796693	.	+	.	Name=Cob_diameter;B73v2_pos=5:62919494;1allele=A/G;version=Hapmap2;RS=rs277763178;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	64824279	64824378	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:63000967;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	64825356	64825455	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:62999890;1allele=T/C;version=Hapmap2;RS=rs819161697;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	65039214	65039313	.	+	.	Name=Leaf_length;B73v2_pos=5:63127403;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	65042375	65042474	.	+	.	Name=Leaf_width;B73v2_pos=5:63124242;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	65150752	65150851	.	+	.	Name=Leaf_width;B73v2_pos=5:63269396;1allele=G/A;version=Hapmap2;RS=rs815631320;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	65437400	65437499	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:63548879;1allele=T/C;version=Hapmap2;RS=rs823889300;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	65531346	65531445	.	+	.	Name=Total_amino_acids;B73v2_pos=5:63615154;1allele=G/A;version=Hapmap2;RS=rs277763757;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	65559213	65559312	.	+	.	Name=Leaf_width;B73v2_pos=5:63665953;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	65610457	65610556	.	+	.	Name=Days_to_silk;B73v2_pos=5:63717094;1allele=A/G;version=Hapmap2;RS=rs726536291;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	66028342	66028441	.	+	.	Name=Leaf_width;B73v2_pos=5:64107073;1allele=A/G;version=Hapmap2;RS=rs1064681567;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	66028357	66028456	.	+	.	Name=Leaf_width;B73v2_pos=5:64107088;1allele=A/G;version=Hapmap2;RS=rs823108191;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	66029245	66029344	.	+	.	Name=Leaf_width;B73v2_pos=5:64107976;1allele=A/G;version=Hapmap1;RS=rs131528039;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	66029650	66029749	.	+	.	Name=Leaf_width;B73v2_pos=5:64108381;1allele=C/G;version=Hapmap2;RS=rs724738467;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	66035990	66036089	.	+	.	Name=Leaf_width;B73v2_pos=5:64114721;1allele=T/C;version=Hapmap2;RS=rs726984419;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	66094015	66094114	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:64193451;1allele=C/A;version=Hapmap2;RS=rs277764202;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	66100828	66100927	.	+	.	Name=Tassel_length;B73v2_pos=5:64200264;1allele=C/A;version=Hapmap2;RS=rs277764224;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	66389459	66389558	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:64467628;1allele=G/A;version=Hapmap2;RS=rs810575947;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	66389459	66389558	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:64467628;1allele=G/A;version=Hapmap2;RS=rs810575947;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	66427261	66427360	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64541334;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	66494179	66494278	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64571161;1allele=G/A;version=Hapmap2;RS=rs817741349;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	66499214	66499313	.	+	.	Name=Tassel_length;B73v2_pos=5:64576196;1allele=C/T;version=Hapmap2;RS=rs277765061;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	66505459	66505558	.	+	.	Name=Leaf_width;B73v2_pos=5:64582441;1allele=T/C;version=Hapmap2;RS=rs833436179;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	66606843	66606942	.	+	.	Name=Tassel_length;B73v2_pos=5:64681500;1allele=A/C;version=Hapmap2;RS=rs130051328;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	66616435	66616534	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64691091;1allele=C/G;version=Hapmap2;RS=rs130051327;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	66667213	66667312	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64726134;1allele=A/G;version=Hapmap2;RS=rs849929742;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	66697464	66697563	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64755584;1allele=T/A;version=Hapmap2;RS=rs809784159;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	66711413	66711512	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64769534;1allele=T/G;version=Hapmap2;RS=rs814958876;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	66720147	66720246	.	+	.	Name=Leaf_width;B73v2_pos=5:64778268;1allele=G/A;version=Hapmap2;RS=rs131528332;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	66730887	66730986	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:64789008;1allele=T/C;version=Hapmap2;RS=rs130051435;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	66733405	66733504	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64791526;1allele=C/T;version=Hapmap2;RS=rs845822937;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	66752089	66752188	.	+	.	Name=Leaf_width;B73v2_pos=5:64810211;1allele=C/T;version=Hapmap2;RS=rs277765320;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	66754717	66754816	.	+	.	Name=Leaf_width;B73v2_pos=5:64812836;1allele=T/G;version=Hapmap2;RS=rs844421463;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	66785299	66785398	.	+	.	Name=Leaf_width;B73v2_pos=5:64844559;1allele=A/G;version=Hapmap2;RS=rs277765340;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	66794888	66794987	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64854147;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	66900319	66900418	.	+	.	Name=Total_amino_acids;B73v2_pos=5:65010074;1allele=A/G;version=Hapmap2;RS=rs832904137;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	66906837	66906936	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64926591;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	66910801	66910900	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64922627;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	67020471	67020570	.	+	.	Name=Leaf_width;B73v2_pos=5:65043213;1allele=A/G;version=Hapmap2;RS=rs830166492;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	67065211	67065310	.	+	.	Name=Total_amino_acids;B73v2_pos=5:65089207;1allele=C/T;version=Hapmap2;RS=rs809250298;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	67155287	67155386	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:65181337;1allele=T/C;version=Hapmap2;RS=rs819375942;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	67233761	67233860	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:65259813;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	67249412	67249511	.	+	.	Name=Total_amino_acids;B73v2_pos=5:65275446;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	67503411	67503510	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:65534798;1allele=G/A;version=Hapmap2;RS=rs814003074;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	67816141	67816240	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:65839358;1allele=A/G;version=Hapmap2;RS=rs1061436421;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	67852879	67852978	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:65876158;1allele=G/A;version=Hapmap2;RS=rs1061406984;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	67915533	67915632	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:65938812;1allele=T/C;version=Hapmap2;RS=rs827023650;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	67982808	67982907	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:66004626;1allele=A/G;version=Hapmap2;RS=rs1062849411;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	67983273	67983372	.	+	.	Name=Height_above_ear;B73v2_pos=5:66005091;1allele=G/A;version=Hapmap2;RS=rs725598862;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	68192948	68193047	.	+	.	Name=Cob_diameter;B73v2_pos=5:66217473;1allele=A/T;version=Hapmap2;RS=rs1060641043;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	68192993	68193092	.	+	.	Name=Cob_diameter;B73v2_pos=5:66217518;1allele=G/A;version=Hapmap2;RS=rs1062164498;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	68223047	68223146	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:66247581;1allele=A/G;version=Hapmap2;RS=rs805319842;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	68367399	68367498	.	+	.	Name=Stalk_strength;B73v2_pos=5:66388712;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	68382794	68382893	.	+	.	Name=Plant_height;B73v2_pos=5:66403646;1allele=G/A;version=Hapmap2;RS=rs837876984;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	68404892	68404991	.	+	.	Name=Total_amino_acids;B73v2_pos=5:66425748;1allele=G/A;version=Hapmap2;RS=rs833171416;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	68983535	68983634	.	+	.	Name=Glucose;B73v2_pos=5:67019111;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	69002860	69002959	.	+	.	Name=Leaf_length;B73v2_pos=5:67039194;1allele=G/A;version=Hapmap2;RS=rs836915207;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	69060277	69060376	.	+	.	Name=Leaf_length;B73v2_pos=5:67086904;1allele=T/C;version=Hapmap2;RS=rs130053222;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	69082999	69083098	.	+	.	Name=Leaf_length;B73v2_pos=5:67109626;1allele=T/G;version=Hapmap2;RS=rs836294271;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	69647266	69647365	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:67673484;1allele=C/G;version=Hapmap1;RS=rs131529767;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	69745806	69745905	.	+	.	Name=Stalk_strength;B73v2_pos=5:67772030;1allele=C/T;version=Hapmap2;RS=rs814690641;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	70009985	70010084	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:68023990;1allele=A/G;version=Hapmap2;RS=rs802325759;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	70106029	70106128	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:68119027;1allele=A/C;version=Hapmap2;RS=rs841546592;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	70157867	70157966	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:68170878;1allele=G/A;version=Hapmap2;RS=rs811419264;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	70157867	70157966	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:68170878;1allele=G/A;version=Hapmap2;RS=rs811419264;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	70166220	70166319	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:68179232;1allele=T/C;version=Hapmap2;RS=rs844321496;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	70303360	70303459	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:68307763;1allele=G/A;version=Hapmap2;RS=rs822825007;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	70338453	70338552	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:68360299;1allele=G/A;version=Hapmap2;RS=rs815093911;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	70420367	70420466	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:68443642;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	70471096	70471195	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:68508414;1allele=G/T;version=Hapmap1;RS=rs131530255;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	70488975	70489074	.	+	.	Name=Glucose;B73v2_pos=5:68526294;1allele=G/A;version=Hapmap2;RS=rs843784662;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	70764810	70764909	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:68777408;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	71102895	71102994	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:69104171;1allele=T/C;version=Hapmap2;RS=rs818804442;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	71296978	71297077	.	+	.	Name=Starch;B73v2_pos=5:69304091;1allele=C/A;version=Hapmap1;RS=rs130054209;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	71299768	71299867	.	+	.	Name=Sucrose;B73v2_pos=5:69306881;1allele=/AA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	71301799	71301898	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:69308912;1allele=A/G;version=Hapmap1;RS=rs131530840;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	71303054	71303153	.	+	.	Name=Ear_row_number;B73v2_pos=5:69310167;1allele=T/A;version=Hapmap2;RS=rs1063880716;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	71304403	71304502	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:69311516;1allele=+/-;version=Hapmap2;RS=rs811925080;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	71349719	71349818	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:69355501;1allele=T/C;version=Hapmap2;RS=rs839526080;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	71359795	71359894	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:69365574;1allele=C/T;version=Hapmap2;RS=rs824891168;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	71427769	71427868	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:69433589;1allele=A/T;version=Hapmap2;RS=rs130054380;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	71429329	71429428	.	+	.	Name=Tassel_length;B73v2_pos=5:69435065;1allele=G/T;version=Hapmap2;RS=rs831883389;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	71452018	71452117	.	+	.	Name=Cob_diameter;B73v2_pos=5:69457349;1allele=C/T;version=Hapmap2;RS=rs802068522;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	71876608	71876707	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:69870155;1allele=G/T;version=Hapmap2;RS=rs840548447;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	71986510	71986609	.	+	.	Name=Sucrose;B73v2_pos=5:69980147;1allele=G/T;version=Hapmap2;RS=rs840549664;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	72062776	72062875	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:70054665;1allele=A/C;version=Hapmap2;RS=rs130055197;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	72078872	72078971	.	+	.	Name=Days_to_silk;B73v2_pos=5:70070761;1allele=C/T;version=Hapmap1;RS=rs131531309;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	72090686	72090785	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:70082083;1allele=A/T;version=Hapmap1;RS=rs131531297;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	72291080	72291179	.	+	.	Name=Glucose;B73v2_pos=5:70280963;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	72485650	72485749	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:70477768;1allele=A/G;version=Hapmap2;RS=rs277772379;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	72589133	72589232	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:70582853;1allele=G/A;version=Hapmap2;RS=rs724719636;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	72615021	72615120	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:70610140;1allele=C/G;version=Hapmap2;RS=rs809111885;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	72615660	72615759	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:70610779;1allele=A/C;version=Hapmap1;RS=rs807620728;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	72639190	72639289	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:70626143;1allele=G/T;version=Hapmap2;RS=rs726520951;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	72854144	72854243	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:70866592;1allele=C/T;version=Hapmap2;RS=rs818644257;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	72875459	72875558	.	+	.	Name=Tassel_length;B73v2_pos=5:70887919;1allele=C/G;version=Hapmap2;RS=rs806842135;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	72942467	72942566	.	+	.	Name=Sucrose;B73v2_pos=5:70954897;1allele=G/T;version=Hapmap2;RS=rs844954237;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	72984297	72984396	.	+	.	Name=Stalk_strength;B73v2_pos=5:71077279;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	73458155	73458254	.	+	.	Name=Ear_height;B73v2_pos=5:71467429;1allele=G/A;version=Hapmap2;RS=rs816511727;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	73681465	73681564	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:71674714;1allele=A/C;version=Hapmap2;RS=rs804488131;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	73990490	73990589	.	+	.	Name=Sucrose;B73v2_pos=5:71976760;1allele=A/G;version=Hapmap2;RS=rs130057135;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	74012475	74012574	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:71998747;1allele=A/G;version=Hapmap2;RS=rs1061763160;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	74046583	74046682	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=2:2384714;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	74046583	74046682	.	+	.	Name=Plant_height;B73v2_pos=2:2384714;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	74115271	74115370	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:72105200;1allele=C/T;version=Hapmap2;RS=rs277774219;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	74375884	74375983	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:72369736;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	74432882	74432981	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:72427640;1allele=C/T;version=Hapmap2;RS=rs832266132;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	74534681	74534780	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:72520528;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	74584958	74585057	.	+	.	Name=Leaf_length;B73v2_pos=5:72573198;1allele=A/G;version=Hapmap2;RS=rs277774661;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	74687377	74687476	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:72680618;1allele=G/A;version=Hapmap2;RS=rs726088438;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	74691751	74691850	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:72684991;1allele=T/G;version=Hapmap2;RS=rs829636081;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	74704161	74704260	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:72697401;1allele=-/+;version=Hapmap2;RS=rs807161743;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	74780010	74780109	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:72771013;1allele=G/T;version=Hapmap2;RS=rs831545282;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	74884032	74884131	.	+	.	Name=Leaf_width;B73v2_pos=5:72866910;1allele=T/G;version=Hapmap2;RS=rs726848386;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	75057483	75057582	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:73031409;1allele=T/C;version=Hapmap2;RS=rs819319105;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	75062245	75062344	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:73036171;1allele=G/A;version=Hapmap2;RS=rs131532869;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	75063740	75063839	.	+	.	Name=Plant_height;B73v2_pos=5:73037666;1allele=A/G;version=Hapmap2;RS=rs277775558;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	75069957	75070056	.	+	.	Name=Stalk_strength;B73v2_pos=5:73043883;1allele=C/G;version=Hapmap2;RS=rs809836224;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	75077453	75077552	.	+	.	Name=Glucose;B73v2_pos=5:73051379;1allele=A/C;version=Hapmap2;RS=rs277775609;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	75080359	75080458	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:73054285;1allele=A/C;version=Hapmap2;RS=rs130057997;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	75080593	75080692	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:73054519;1allele=C/G;version=Hapmap1;RS=rs130058000;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	75107240	75107339	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:73080949;1allele=C/T;version=Hapmap2;RS=rs821442534;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	75134662	75134761	.	+	.	Name=Plant_height;B73v2_pos=5:73108965;1allele=A/G;version=Hapmap2;RS=rs277775634;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	75150230	75150329	.	+	.	Name=Glucose;B73v2_pos=5:73130371;1allele=A/G;version=Hapmap2;RS=rs818433750;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	75805022	75805121	.	+	.	Name=Tassel_length;B73v2_pos=5:73779553;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	75862022	75862121	.	+	.	Name=Stalk_strength;B73v2_pos=5:73838735;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	76047483	76047582	.	+	.	Name=Sucrose;B73v2_pos=5:74022894;1allele=C/T;version=Hapmap2;RS=rs725134824;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	76223103	76223202	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74197102;1allele=G/A;version=Hapmap2;RS=rs277776154;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	76269658	76269757	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74243660;1allele=C/T;version=Hapmap2;RS=rs277776190;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	76321379	76321478	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:74289585;1allele=G/A;version=Hapmap2;RS=rs842864726;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	76321941	76322040	.	+	.	Name=Sucrose;B73v2_pos=5:74290147;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	76371153	76371252	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:74329848;1allele=A/C;version=Hapmap2;RS=rs1064144212;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	76380714	76380813	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:74339410;1allele=T/A;version=Hapmap2;RS=rs277776270;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	76424672	76424771	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74385157;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	76449681	76449780	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:74406653;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	76452283	76452382	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74409255;1allele=T/G;version=Hapmap2;RS=rs130058680;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	76454082	76454181	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:74411054;1allele=G/A;version=Hapmap2;RS=rs838670703;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	76494044	76494143	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:74449159;1allele=T/G;version=Hapmap2;RS=rs824654849;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	76548024	76548123	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:74503140;1allele=G/A;version=Hapmap2;RS=rs803716208;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	76549362	76549461	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:74504478;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	76649474	76649573	.	+	.	Name=Starch;B73v2_pos=5:74601444;1allele=T/C;version=Hapmap2;RS=rs131533972;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	76710377	76710476	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:74661238;1allele=T/C;version=Hapmap2;RS=rs131534189;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	76713501	76713600	.	+	.	Name=Plant_height;B73v2_pos=5:74664362;1allele=T/C;version=Hapmap2;RS=rs277776689;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	76714274	76714373	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:74665135;1allele=G/A;version=Hapmap2;RS=rs131534212;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	76728086	76728185	.	+	.	Name=Leaf_length;B73v2_pos=5:74678948;1allele=G/C;version=Hapmap2;RS=rs843493880;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	76911036	76911135	.	+	.	Name=Tassel_length;B73v2_pos=5:74860760;1allele=G/T;version=Hapmap2;RS=rs843172076;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	76920136	76920235	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74869860;1allele=T/C;version=Hapmap2;RS=rs1062506430;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	76924115	76924214	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:74873840;1allele=A/T;version=Hapmap2;RS=rs844212585;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	76943596	76943695	.	+	.	Name=Leaf_length;B73v2_pos=5:74888230;1allele=G/T;version=Hapmap2;RS=rs833725466;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	76968560	76968659	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74913177;1allele=T/A;version=Hapmap2;RS=rs131534371;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	76970694	76970793	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:74915311;1allele=C/T;version=Hapmap2;RS=rs818495679;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	76971591	76971690	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74916208;1allele=C/A;version=Hapmap2;RS=rs724221073;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	76971989	76972088	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:74916606;1allele=G/A;version=Hapmap2;RS=rs726936050;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	76974725	76974824	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:74919342;1allele=G/T;version=Hapmap2;RS=rs820449800;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	76976306	76976405	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:74920923;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	77282681	77282780	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:75217951;1allele=A/G;version=Hapmap2;RS=rs846977424;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	77443573	77443672	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:75369099;1allele=C/T;version=Hapmap2;RS=rs801948209;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	77547964	77548063	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:75536698;1allele=G/A;version=Hapmap2;RS=rs827265388;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	77607235	77607334	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:75486748;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	77629152	77629251	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:75469339;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	77865710	77865809	.	+	.	Name=Plant_height;B73v2_pos=5:75781941;1allele=G/A;version=Hapmap2;RS=rs848483509;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	78180459	78180558	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:76100492;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	78193143	78193242	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:76113484;1allele=T/A;version=Hapmap2;RS=rs131534799;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	78193146	78193245	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:76113487;1allele=C/T;version=Hapmap2;RS=rs131534800;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	78200065	78200164	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:76120406;1allele=C/T;version=Hapmap2;RS=rs810653191;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	78201662	78201761	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:76122003;1allele=G/A;version=Hapmap2;RS=rs849188859;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	78262563	78262662	.	+	.	Name=Leaf_length;B73v2_pos=5:76160727;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	78301848	78301947	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:76214954;1allele=T/A;version=Hapmap2;RS=rs823584226;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	78302130	78302229	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:76215236;1allele=T/C;version=Hapmap1;RS=rs131534876;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	78304948	78305047	.	+	.	Name=Leaf_length;B73v2_pos=5:76218053;1allele=G/A;version=Hapmap2;RS=rs131534927;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	78307045	78307144	.	+	.	Name=Leaf_length;B73v2_pos=5:76220150;1allele=T/C;version=Hapmap2;RS=rs808793146;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	78462156	78462255	.	+	.	Name=Leaf_length;B73v2_pos=5:76373731;1allele=-/+;version=Hapmap2;RS=rs1061257764;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	78693712	78693811	.	+	.	Name=Leaf_length;B73v2_pos=5:76558961;1allele=A/T;version=Hapmap2;RS=rs813993501;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	78708362	78708461	.	+	.	Name=Leaf_length;B73v2_pos=5:76613695;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	78714846	78714945	.	+	.	Name=Leaf_length;B73v2_pos=5:76620177;1allele=T/C;version=Hapmap2;RS=rs812701117;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	78727237	78727336	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:76632568;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	78785543	78785642	.	+	.	Name=Leaf_length;B73v2_pos=5:76689732;1allele=G/T;version=Hapmap2;RS=rs724722994;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	78827366	78827465	.	+	.	Name=Plant_height;B73v2_pos=5:76731278;1allele=T/C;version=Hapmap2;RS=rs843192160;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	78828701	78828800	.	+	.	Name=Plant_height;B73v2_pos=5:76732613;1allele=A/G;version=Hapmap2;RS=rs725144013;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	78830726	78830825	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:76734638;1allele=T/A;version=Hapmap2;RS=rs818361786;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	78830726	78830825	.	+	.	Name=Plant_height;B73v2_pos=5:76734638;1allele=T/A;version=Hapmap2;RS=rs818361786;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	78834282	78834381	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:76738194;1allele=T/G;version=Hapmap2;RS=rs808281773;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	78864442	78864541	.	+	.	Name=Height_above_ear;B73v2_pos=5:76767830;1allele=A/G;version=Hapmap2;RS=rs844185312;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	78948246	78948345	.	+	.	Name=Ear_height;B73v2_pos=5:76860773;1allele=A/G;version=Hapmap2;RS=rs804303671;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	78964503	78964602	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:76870588;1allele=A/T;version=Hapmap2;RS=rs819735124;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	78969373	78969472	.	+	.	Name=Plant_height;B73v2_pos=5:76875689;1allele=A/G;version=Hapmap2;RS=rs725619491;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	78996901	78997000	.	+	.	Name=Fumarate;B73v2_pos=2:215333007;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	79020668	79020767	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:76927156;1allele=A/T;version=Hapmap2;RS=rs724871255;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	79020668	79020767	.	+	.	Name=Plant_height;B73v2_pos=5:76927156;1allele=A/T;version=Hapmap2;RS=rs724871255;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	79021301	79021400	.	+	.	Name=Plant_height;B73v2_pos=5:76927789;1allele=T/C;version=Hapmap2;RS=rs846274407;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	79054490	79054589	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:76960278;1allele=T/C;version=Hapmap2;RS=rs726362907;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	79218637	79218736	.	+	.	Name=Ear_row_number;B73v2_pos=5:77131074;1allele=T/C;version=Hapmap1;RS=rs1063040838;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	79306288	79306387	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:77211756;1allele=G/A;version=Hapmap2;RS=rs847002200;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	79307675	79307774	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:77213143;1allele=A/G;version=Hapmap2;RS=rs846703667;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	79312814	79312913	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:77218282;1allele=C/T;version=Hapmap2;RS=rs807549806;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	79322766	79322865	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:77236154;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	79340531	79340630	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:77249719;1allele=A/G;version=Hapmap2;RS=rs811470856;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	79344635	79344734	.	+	.	Name=Ear_row_number;B73v2_pos=5:77253823;1allele=A/T;version=Hapmap1;RS=rs131535870;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	79353625	79353724	.	+	.	Name=Ear_row_number;B73v2_pos=5:77262612;1allele=C/T;version=Hapmap2;RS=rs724325562;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	79568158	79568257	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:77481880;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	79834718	79834817	.	+	.	Name=Starch;B73v2_pos=5:77722976;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	79861849	79861948	.	+	.	Name=Ear_row_number;B73v2_pos=5:77750110;1allele=T/C;version=Hapmap2;RS=rs834035137;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	79862545	79862644	.	+	.	Name=Sucrose;B73v2_pos=5:77750806;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	79862545	79862644	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:77750806;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	80002021	80002120	.	+	.	Name=Ear_row_number;B73v2_pos=5:77914505;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	80030269	80030368	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:77942755;1allele=C/T;version=Hapmap2;RS=rs837409478;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	80466421	80466520	.	+	.	Name=Plant_height;B73v2_pos=1:202003052;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	81170672	81170771	.	+	.	Name=Stalk_strength;B73v2_pos=5:79014585;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	81204656	81204755	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:79157554;1allele=T/G;version=Hapmap1;RS=rs131536838;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	81580169	81580268	.	+	.	Name=Stalk_strength;B73v2_pos=5:79529669;1allele=C/T;version=Hapmap2;RS=rs805747214;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	81657375	81657474	.	+	.	Name=Sucrose;B73v2_pos=5:79606885;1allele=A/G;version=Hapmap2;RS=rs811713932;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	81794029	81794128	.	+	.	Name=Stalk_strength;B73v2_pos=5:79729895;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	81917100	81917199	.	+	.	Name=Stalk_strength;B73v2_pos=5:79862506;1allele=G/A;version=Hapmap2;RS=rs849225044;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	82764870	82764969	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:80827336;1allele=C/T;version=Hapmap2;RS=rs843224787;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	82815166	82815265	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:80877631;1allele=A/C;version=Hapmap2;RS=rs824377029;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	83093580	83093679	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:81151202;1allele=C/T;version=Hapmap2;RS=rs1060804604;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	83116890	83116989	.	+	.	Name=Sucrose;B73v2_pos=5:81173242;1allele=G/A;version=Hapmap2;RS=rs842520571;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	83116890	83116989	.	+	.	Name=Starch;B73v2_pos=5:81173242;1allele=G/A;version=Hapmap2;RS=rs842520571;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	83397060	83397159	.	+	.	Name=Sucrose;B73v2_pos=5:81459842;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	84171566	84171665	.	+	.	Name=Stalk_strength;B73v2_pos=5:82218249;1allele=C/T;version=Hapmap2;RS=rs834020696;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	84472349	84472448	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:82548605;1allele=A/G;version=Hapmap2;RS=rs812267764;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	84472354	84472453	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:82548610;1allele=A/T;version=Hapmap2;RS=rs807941814;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	85019643	85019742	.	+	.	Name=Leaf_length;B73v2_pos=5:83079363;1allele=T/G;version=Hapmap2;RS=rs1064376561;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	85096582	85096681	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:83165810;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	85096586	85096685	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:83165806;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	85148720	85148819	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:83207264;1allele=A/T;version=Hapmap2;RS=rs818744180;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	85229167	85229266	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:83279771;1allele=C/A;version=Hapmap1;RS=rs131538935;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	85286996	85287095	.	+	.	Name=Stalk_strength;B73v2_pos=5:83336087;1allele=C/T;version=Hapmap2;RS=rs810250336;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	85383149	85383248	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:83434135;1allele=T/C;version=Hapmap2;RS=rs809126679;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	86077248	86077347	.	+	.	Name=Malate;B73v2_pos=5:84083699;1allele=G/T;version=Hapmap2;RS=rs277784386;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	86081406	86081505	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:84087857;1allele=C/T;version=Hapmap2;RS=rs828179050;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	86082903	86083002	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:84089351;1allele=T/C;version=Hapmap2;RS=rs804295925;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	86099493	86099592	.	+	.	Name=Cob_diameter;B73v2_pos=5:84105637;1allele=C/T;version=Hapmap2;RS=rs726936266;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	86148381	86148480	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:84151871;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	86223984	86224083	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:84227323;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	86265480	86265579	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:84268830;1allele=C/T;version=Hapmap2;RS=rs840835369;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	86272775	86272874	.	+	.	Name=Glucose;B73v2_pos=5:84276126;1allele=C/A;version=Hapmap2;RS=rs829297873;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	86337280	86337379	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:84340827;1allele=G/A;version=Hapmap2;RS=rs849965995;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	86426813	86426912	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:84427060;1allele=T/C;version=Hapmap2;RS=rs277784954;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	86481413	86481512	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:84481628;1allele=A/G;version=Hapmap2;RS=rs130062450;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	86497423	86497510	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:84498091;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	86538717	86538816	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:84539199;1allele=A/G;version=Hapmap2;RS=rs816660225;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	86542858	86542957	.	+	.	Name=Plant_height;B73v2_pos=5:84543340;1allele=G/A;version=Hapmap2;RS=rs804245638;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	86542858	86542957	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:84543340;1allele=G/A;version=Hapmap2;RS=rs804245638;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	86542858	86542957	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:84543340;1allele=G/A;version=Hapmap2;RS=rs804245638;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	86605133	86605232	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:84604655;1allele=C/T;version=Hapmap2;RS=rs808663157;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	86607190	86607289	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:84606712;1allele=G/A;version=Hapmap2;RS=rs1061336495;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	86623913	86624012	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:84623286;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	86687086	86687185	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:84685378;1allele=C/T;version=Hapmap2;RS=rs727124697;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	86845921	86846020	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:84848724;1allele=C/A;version=Hapmap2;RS=rs833191953;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	86968858	86968957	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:84961775;1allele=C/T;version=Hapmap2;RS=rs814199680;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	87274921	87275020	.	+	.	Name=Glucose;B73v2_pos=5:85251373;1allele=A/G;version=Hapmap2;RS=rs130063124;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	87747782	87747881	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:85700173;1allele=G/A;version=Hapmap2;RS=rs831548566;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	87843678	87843777	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:85797443;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	88081551	88081650	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:86021607;1allele=T/C;version=Hapmap2;RS=rs130063610;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	88083064	88083163	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:86023120;1allele=C/T;version=Hapmap2;RS=rs830962837;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	88204463	88204562	.	+	.	Name=Days_to_silk;B73v2_pos=5:86145775;1allele=A/C;version=Hapmap2;RS=rs130063742;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	88747196	88747295	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:86721848;1allele=G/A;version=Hapmap2;RS=rs277788392;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	88748085	88748184	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:86722737;1allele=A/C;version=Hapmap2;RS=rs277788404;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	88851212	88851311	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:86826052;1allele=T/C;version=Hapmap2;RS=rs277788445;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	88971017	88971116	.	+	.	Name=Starch;B73v2_pos=5:86949052;1allele=T/C;version=Hapmap2;RS=rs835666177;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	89078818	89078917	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:87072062;1allele=A/G;version=Hapmap2;RS=rs827385206;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	89359766	89359865	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:87336579;1allele=A/G;version=Hapmap2;RS=rs724169682;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	89494511	89494610	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:87465049;1allele=G/A;version=Hapmap2;RS=rs847502363;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	89940131	89940230	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:87894641;1allele=G/C;version=Hapmap2;RS=rs130064546;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	89940131	89940230	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:87894641;1allele=G/C;version=Hapmap2;RS=rs130064546;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	89969738	89969837	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:87923731;1allele=C/G;version=Hapmap2;RS=rs843263707;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	90022363	90022462	.	+	.	Name=Height_above_ear;B73v2_pos=5:87948308;1allele=G/A;version=Hapmap2;RS=rs277789509;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	90022393	90022492	.	+	.	Name=Height_above_ear;B73v2_pos=5:87948338;1allele=G/A;version=Hapmap2;RS=rs835030728;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	90023264	90023363	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:87949209;1allele=G/A;version=Hapmap1;RS=rs131541288;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	90023264	90023363	.	+	.	Name=Height_above_ear;B73v2_pos=5:87949209;1allele=G/A;version=Hapmap1;RS=rs131541288;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	90272458	90272557	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:88197525;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	90473101	90473200	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:88447416;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	90683481	90683580	.	+	.	Name=Leaf_width;B73v2_pos=5:88612333;1allele=G/T;version=Hapmap1;RS=rs131541552;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	90791474	90791573	.	+	.	Name=Height_above_ear;B73v2_pos=5:88726996;1allele=G/A;version=Hapmap2;RS=rs277791079;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	90996743	90996842	.	+	.	Name=Starch;B73v2_pos=5:88936710;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91269681	91269780	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:89201434;1allele=G/T;version=Hapmap2;RS=rs810796638;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	91347899	91347998	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:89321862;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91348375	91348474	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:89321386;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91350287	91350386	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:89319474;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91350287	91350386	.	+	.	Name=Days_to_silk;B73v2_pos=5:89319474;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91350351	91350450	.	+	.	Name=Protein;B73v2_pos=5:89319410;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91378632	91378731	.	+	.	Name=Protein;B73v2_pos=5:89287541;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91379344	91379443	.	+	.	Name=Protein;B73v2_pos=5:89286829;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91491004	91491103	.	+	.	Name=Protein;B73v2_pos=5:89405102;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91491006	91491105	.	+	.	Name=Protein;B73v2_pos=5:89405104;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91491038	91491137	.	+	.	Name=Protein;B73v2_pos=5:89405136;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	91510702	91510801	.	+	.	Name=Leaf_width;B73v2_pos=5:89424802;1allele=C/T;version=Hapmap2;RS=rs805237141;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	91541116	91541215	.	+	.	Name=Leaf_width;B73v2_pos=5:89455216;1allele=T/C;version=Hapmap2;RS=rs130065148;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	91643472	91643571	.	+	.	Name=Tassel_length;B73v2_pos=5:89621608;1allele=G/T;version=Hapmap2;RS=rs805695374;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	91645159	91645258	.	+	.	Name=Tassel_length;B73v2_pos=5:89623295;1allele=T/C;version=Hapmap2;RS=rs850232046;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	91728297	91728396	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:89710521;1allele=T/C;version=Hapmap2;RS=rs130065593;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	91741568	91741667	.	+	.	Name=Leaf_width;B73v2_pos=5:89723792;1allele=C/T;version=Hapmap2;RS=rs725552927;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	91892403	91892502	.	+	.	Name=Plant_height;B73v2_pos=5:89875459;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	92124804	92124903	.	+	.	Name=Plant_height;B73v2_pos=5:90133275;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	92411933	92412032	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:90322691;1allele=G/A;version=Hapmap2;RS=rs810145231;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	92434566	92434665	.	+	.	Name=Ear_row_number;B73v2_pos=5:90345336;1allele=C/A;version=Hapmap1;RS=rs131542443;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	92844736	92844835	.	+	.	Name=Leaf_width;B73v2_pos=5:90749896;1allele=G/A;version=Hapmap2;RS=rs845604876;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	93160278	93160377	.	+	.	Name=Tassel_length;B73v2_pos=5:91069454;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	93300399	93300498	.	+	.	Name=Protein;B73v2_pos=5:91209240;1allele=G/A;version=Hapmap2;RS=rs1063867931;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	93462502	93462601	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:91367273;1allele=+/-;version=Hapmap2;RS=rs824968570;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	93804111	93804210	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:91697608;1allele=C/T;version=Hapmap2;RS=rs825603090;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	93867848	93867947	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:91731904;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	94582367	94582466	.	+	.	Name=Ear_row_number;B73v2_pos=5:92478707;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	95460206	95460305	.	+	.	Name=Ear_row_number;B73v2_pos=5:93321936;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	95729145	95729244	.	+	.	Name=Height_above_ear;B73v2_pos=5:93581471;1allele=C/T;version=Hapmap2;RS=rs130071036;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	95759130	95759229	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:93611564;1allele=A/G;version=Hapmap2;RS=rs277799467;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	95766695	95766794	.	+	.	Name=Height_above_ear;B73v2_pos=5:93619129;1allele=G/A;version=Hapmap2;RS=rs130071082;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	95767101	95767200	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:93619535;1allele=C/T;version=Hapmap2;RS=rs1063301583;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	95770135	95770234	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:93622569;1allele=A/G;version=Hapmap2;RS=rs1064678331;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	95935069	95935168	.	+	.	Name=Glucose;B73v2_pos=5:93787115;1allele=G/A;version=Hapmap2;RS=rs841216694;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	95962886	95962985	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:93814932;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	96013487	96013586	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:93864032;1allele=G/A;version=Hapmap2;RS=rs822514070;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	96021422	96021521	.	+	.	Name=Glucose;B73v2_pos=5:93871969;1allele=C/T;version=Hapmap2;RS=rs801937557;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	96098343	96098442	.	+	.	Name=Tassel_length;B73v2_pos=5:93904554;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	96153519	96153618	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:93958931;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	96200855	96200954	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:94016133;1allele=C/A;version=Hapmap2;RS=rs130071585;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	96270698	96270797	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:94085039;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	96337423	96337522	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:94146413;1allele=C/T;version=Hapmap2;RS=rs130071824;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	96752301	96752400	.	+	.	Name=Ear_row_number;B73v2_pos=5:94545922;1allele=G/A;version=Hapmap2;RS=rs1062789798;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	97430488	97430587	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:95247896;1allele=T/C;version=Hapmap2;RS=rs726222669;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	98588309	98588408	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:96394634;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	99113381	99113480	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:96887406;1allele=A/G;version=Hapmap2;RS=rs130074937;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	99649499	99649598	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:97413393;1allele=T/C;version=Hapmap1;RS=rs130075660;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	100028859	100028958	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:97782859;1allele=T/C;version=Hapmap2;RS=rs835836363;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	100085671	100085770	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:97873917;1allele=A/G;version=Hapmap1;RS=rs131545447;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	100085680	100085779	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:97873926;1allele=C/T;version=Hapmap1;RS=rs131545448;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	100104188	100104287	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:97892435;1allele=T/A;version=Hapmap2;RS=rs819635114;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	100401572	100401671	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:98187768;1allele=G/A;version=Hapmap2;RS=rs724236938;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	100502393	100502492	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:98290685;1allele=G/A;version=Hapmap2;RS=rs820363203;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	100578996	100579095	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:98367789;1allele=C/T;version=Hapmap2;RS=rs130076748;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	100594027	100594126	.	+	.	Name=Height_above_ear;B73v2_pos=5:98382824;1allele=G/A;version=Hapmap2;RS=rs130076790;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	100603309	100603408	.	+	.	Name=Height_above_ear;B73v2_pos=5:98392106;1allele=C/T;version=Hapmap2;RS=rs130076874;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	100652268	100652367	.	+	.	Name=Height_above_ear;B73v2_pos=5:98441175;1allele=C/T;version=Hapmap2;RS=rs130076962;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	100654608	100654707	.	+	.	Name=Height_above_ear;B73v2_pos=5:98443515;1allele=G/T;version=Hapmap2;RS=rs277807490;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	100661384	100661483	.	+	.	Name=Height_above_ear;B73v2_pos=5:98450293;1allele=G/A;version=Hapmap2;RS=rs1060517254;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	100817548	100817647	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:98617884;1allele=C/G;version=Hapmap2;RS=rs837064190;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	101791290	101791389	.	+	.	Name=Tassel_length;B73v2_pos=5:99575346;1allele=C/A;version=Hapmap2;RS=rs828672205;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	101848810	101848909	.	+	.	Name=Tassel_length;B73v2_pos=5:99632645;1allele=A/G;version=Hapmap2;RS=rs829998695;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	102336500	102336599	.	+	.	Name=Ear_row_number;B73v2_pos=5:100159299;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	102601702	102601801	.	+	.	Name=Ear_row_number;B73v2_pos=5:100390678;1allele=T/C;version=Hapmap2;RS=rs130078592;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	102722844	102722943	.	+	.	Name=Tassel_length;B73v2_pos=5:100508258;1allele=G/A;version=Hapmap1;RS=rs131546488;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	103531022	103531121	.	+	.	Name=Cob_diameter;B73v2_pos=5:101300524;1allele=C/T;version=Hapmap2;RS=rs277809866;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	103673942	103674041	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:101440862;1allele=G/A;version=Hapmap2;RS=rs277809963;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	103702330	103702429	.	+	.	Name=Starch;B73v2_pos=5:101469024;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	106058914	106059013	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:249891397;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	107635314	107635413	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:105343164;1allele=G/A;version=Hapmap2;RS=rs805118611;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	109533303	109533402	.	+	.	Name=Tassel_length;B73v2_pos=5:107198183;1allele=C/G;version=Hapmap1;RS=rs132217603;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	110920098	110920197	.	+	.	Name=Starch;B73v2_pos=5:108563943;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	111660336	111660435	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:109286868;1allele=G/A;version=Hapmap2;RS=rs827315224;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	112763446	112763545	.	+	.	Name=Tassel_length;B73v2_pos=5:110387645;1allele=G/A;version=Hapmap2;RS=rs837993347;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	113098999	113099098	.	+	.	Name=Stalk_strength;B73v2_pos=5:110728369;1allele=C/G;version=Hapmap2;RS=rs819351670;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	114029729	114029828	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:111650254;1allele=A/T;version=Hapmap2;RS=rs823513112;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	114383878	114383977	.	+	.	Name=Cob_diameter;B73v2_pos=5:111997158;1allele=G/A;version=Hapmap2;RS=rs132218932;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	114485805	114485904	.	+	.	Name=Stalk_strength;B73v2_pos=5:112100577;1allele=C/T;version=Hapmap2;RS=rs130087292;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	114721900	114721999	.	+	.	Name=Stalk_strength;B73v2_pos=5:112330983;1allele=A/C;version=Hapmap2;RS=rs725285459;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	114952053	114952152	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:112490000;1allele=C/T;version=Hapmap2;RS=rs812875136;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	114952053	114952152	.	+	.	Name=Starch;B73v2_pos=5:112490000;1allele=C/T;version=Hapmap2;RS=rs812875136;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	115793949	115794048	.	+	.	Name=Starch;B73v2_pos=5:113388490;1allele=G/T;version=Hapmap2;RS=rs824824256;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	116435562	116435661	.	+	.	Name=Days_to_silk;B73v2_pos=5:114022406;1allele=A/G;version=Hapmap2;RS=rs835149598;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	117266864	117266963	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:114830798;1allele=A/G;version=Hapmap2;RS=rs831147697;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	117266864	117266963	.	+	.	Name=Days_to_silk;B73v2_pos=5:114830798;1allele=A/G;version=Hapmap2;RS=rs831147697;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	126018594	126018693	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:123335393;1allele=G/A;version=Hapmap2;RS=rs727205190;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	126165033	126165132	.	+	.	Name=Plant_height;B73v2_pos=5:123404700;1allele=T/A;version=Hapmap2;RS=rs277821939;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	126248865	126248964	.	+	.	Name=Plant_height;B73v2_pos=5:123552140;1allele=A/G;version=Hapmap2;RS=rs823295196;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	126690078	126690177	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:123989457;1allele=A/C;version=Hapmap2;RS=rs724176332;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	127110303	127110402	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:124428981;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	127351925	127352024	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:124648471;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	127351925	127352024	.	+	.	Name=Starch;B73v2_pos=5:124648471;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	127974584	127974683	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:125260267;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	129543219	129543318	.	+	.	Name=Ear_height;B73v2_pos=5:126817741;1allele=C/A;version=Hapmap2;RS=rs812088357;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	129722597	129722696	.	+	.	Name=Ear_row_number;B73v2_pos=5:127023540;1allele=G/T;version=Hapmap1;RS=rs817959605;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	130444925	130445024	.	+	.	Name=Ear_row_number;B73v2_pos=5:127606008;1allele=T/C;version=Hapmap2;RS=rs277824050;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	130446999	130447098	.	+	.	Name=Ear_row_number;B73v2_pos=5:127608082;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	130452327	130452426	.	+	.	Name=Ear_row_number;B73v2_pos=5:127613411;1allele=G/A;version=Hapmap2;RS=rs277824234;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	130452343	130452442	.	+	.	Name=Ear_row_number;B73v2_pos=5:127613427;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	130463493	130463592	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:127624595;1allele=T/G;version=Hapmap2;RS=rs130096314;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	130463578	130463677	.	+	.	Name=Ear_row_number;B73v2_pos=5:127624680;1allele=G/A;version=Hapmap2;RS=rs130096315;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	130523765	130523864	.	+	.	Name=Ear_height;B73v2_pos=5:127684900;1allele=T/G;version=Hapmap2;RS=rs277824417;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	130569051	130569150	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:127726072;1allele=C/T;version=Hapmap2;RS=rs841907708;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	130620034	130620133	.	+	.	Name=Tassel_length;B73v2_pos=5:127777054;1allele=A/G;version=Hapmap2;RS=rs130096507;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	130708213	130708312	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:127918691;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	132310246	132310345	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:129401341;1allele=T/C;version=Hapmap2;RS=rs130097584;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	132655445	132655544	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:129734790;1allele=T/C;version=Hapmap2;RS=rs823866641;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	133841444	133841543	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:130888369;1allele=T/C;version=Hapmap2;RS=rs805173313;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	134131123	134131222	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:131175178;1allele=G/T;version=Hapmap2;RS=rs277830493;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	134355643	134355742	.	+	.	Name=Ear_height;B73v2_pos=5:131564689;1allele=A/T;version=Hapmap2;RS=rs840044261;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	134445025	134445124	.	+	.	Name=Ear_height;B73v2_pos=5:131653518;1allele=A/G;version=Hapmap2;RS=rs825993397;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	134634178	134634277	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:131843741;1allele=C/T;version=Hapmap2;RS=rs824960055;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	134777283	134777382	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:131989619;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	135110150	135110249	.	+	.	Name=Cob_diameter;B73v2_pos=5:132313527;1allele=C/G;version=Hapmap2;RS=rs725946767;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	135424204	135424303	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:132656871;1allele=/GTAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	135488755	135488854	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:132643204;1allele=T/C;version=Hapmap2;RS=rs811699567;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	135768828	135768927	.	+	.	Name=Tassel_length;B73v2_pos=5:132995088;1allele=A/G;version=Hapmap2;RS=rs808990061;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	135933119	135933218	.	+	.	Name=Tassel_length;B73v2_pos=5:133194591;1allele=T/A;version=Hapmap2;RS=rs1062141875;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	135933220	135933319	.	+	.	Name=Tassel_length;B73v2_pos=5:133194692;1allele=C/T;version=Hapmap2;RS=rs839221245;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	135942706	135942805	.	+	.	Name=Tassel_length;B73v2_pos=5:133204178;1allele=A/G;version=Hapmap2;RS=rs837229370;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	136040994	136041093	.	+	.	Name=Tassel_length;B73v2_pos=5:133302590;1allele=T/C;version=Hapmap2;RS=rs811721790;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	136073864	136073963	.	+	.	Name=Tassel_length;B73v2_pos=5:133332848;1allele=A/C;version=Hapmap2;RS=rs805378870;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	136175638	136175737	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:133451944;1allele=T/A;version=Hapmap2;RS=rs847467508;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	136405075	136405174	.	+	.	Name=Tassel_length;B73v2_pos=5:133670848;1allele=G/T;version=Hapmap1;RS=rs132224284;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	136436791	136436890	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:133702574;1allele=C/A;version=Hapmap2;RS=rs817893328;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	136948798	136948897	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:134209017;1allele=T/C;version=Hapmap2;RS=rs834995649;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	137390546	137390645	.	+	.	Name=Tassel_length;B73v2_pos=5:134649551;1allele=C/A;version=Hapmap2;RS=rs838523109;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	137469932	137470031	.	+	.	Name=Tassel_length;B73v2_pos=5:134714528;1allele=C/A;version=Hapmap2;RS=rs839788020;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	137528216	137528315	.	+	.	Name=Tassel_length;B73v2_pos=5:134772397;1allele=C/T;version=Hapmap2;RS=rs825103890;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	137935482	137935581	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:135222399;1allele=A/T;version=Hapmap2;RS=rs843484902;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	138056569	138056668	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:135354360;1allele=C/T;version=Hapmap2;RS=rs832722225;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	138616805	138616904	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:135882321;1allele=A/T;version=Hapmap2;RS=rs841082706;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	139227594	139227693	.	+	.	Name=Glucose;B73v2_pos=5:136511557;1allele=G/A;version=Hapmap2;RS=rs823158018;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	140617415	140617514	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:137874303;1allele=T/C;version=Hapmap2;RS=rs130107418;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	141010830	141010929	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:138251866;1allele=T/C;version=Hapmap2;RS=rs803274465;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	141016584	141016683	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:138257619;1allele=G/T;version=Hapmap2;RS=rs725039943;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	141418064	141418163	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:138661151;1allele=G/A;version=Hapmap2;RS=rs842319703;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	141669548	141669647	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:138919343;1allele=G/A;version=Hapmap2;RS=rs827735343;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	141982759	141982858	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:139234140;1allele=A/G;version=Hapmap2;RS=rs132226104;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	142502162	142502261	.	+	.	Name=Ear_row_number;B73v2_pos=5:139761001;1allele=T/C;version=Hapmap2;RS=rs802314405;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	142502184	142502283	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:139761023;1allele=G/A;version=Hapmap2;RS=rs840852705;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	142651168	142651267	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:139885218;1allele=C/G;version=Hapmap2;RS=rs839280323;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	142850274	142850373	.	+	.	Name=Ear_row_number;B73v2_pos=5:140080867;1allele=C/T;version=Hapmap2;RS=rs130111700;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	142854813	142854912	.	+	.	Name=Stalk_strength;B73v2_pos=5:140085406;1allele=G/A;version=Hapmap2;RS=rs825912952;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	142907310	142907409	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:140137903;1allele=T/A;version=Hapmap2;RS=rs814983122;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	143091539	143091638	.	+	.	Name=Ear_row_number;B73v2_pos=5:140317337;1allele=T/C;version=Hapmap2;RS=rs825810363;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	143191346	143191445	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:140417185;1allele=G/T;version=Hapmap2;RS=rs130112313;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	143268585	143268684	.	+	.	Name=Ear_row_number;B73v2_pos=5:140494422;1allele=C/T;version=Hapmap2;RS=rs130112660;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	143722346	143722445	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:140958153;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	143742827	143742926	.	+	.	Name=Ear_row_number;B73v2_pos=5:140937485;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	143842863	143842962	.	+	.	Name=Ear_row_number;B73v2_pos=5:141070523;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	144012509	144012608	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:141240069;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	144203238	144203337	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:141430397;1allele=A/G;version=Hapmap2;RS=rs836161730;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	144207108	144207207	.	+	.	Name=Height_above_ear;B73v2_pos=5:141434268;1allele=G/A;version=Hapmap2;RS=rs130113419;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	144398596	144398695	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:141658252;1allele=G/C;version=Hapmap2;RS=rs277847045;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	144625099	144625198	.	+	.	Name=Ear_row_number;B73v2_pos=5:141855547;1allele=A/T;version=Hapmap1;RS=rs725830309;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	144625101	144625200	.	+	.	Name=Ear_row_number;B73v2_pos=5:141855549;1allele=G/A;version=Hapmap1;RS=rs132227373;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	144637652	144637751	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:141868102;1allele=A/G;version=Hapmap2;RS=rs726198454;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	144670828	144670927	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:141941713;1allele=C/T;version=Hapmap2;RS=rs835465808;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	144686506	144686605	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:141957391;1allele=A/G;version=Hapmap2;RS=rs130114925;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	144687624	144687723	.	+	.	Name=Ear_row_number;B73v2_pos=5:141958509;1allele=T/C;version=Hapmap2;RS=rs130114936;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	144701854	144701953	.	+	.	Name=Ear_row_number;B73v2_pos=5:141972826;1allele=A/C;version=Hapmap2;RS=rs130114967;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	144703051	144703150	.	+	.	Name=Ear_row_number;B73v2_pos=5:141974023;1allele=T/C;version=Hapmap2;RS=rs725968890;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	144705988	144706087	.	+	.	Name=Ear_row_number;B73v2_pos=5:141976960;1allele=T/C;version=Hapmap2;RS=rs277847755;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	144876073	144876172	.	+	.	Name=Ear_row_number;B73v2_pos=5:142137325;1allele=A/C;version=Hapmap2;RS=rs132227445;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	144880227	144880326	.	+	.	Name=Ear_row_number;B73v2_pos=5:142141479;1allele=T/C;version=Hapmap2;RS=rs130115154;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	144920762	144920861	.	+	.	Name=Ear_row_number;B73v2_pos=5:142181226;1allele=A/G;version=Hapmap1;RS=rs130115183;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	145060205	145060304	.	+	.	Name=Total_amino_acids;B73v2_pos=5:142301357;1allele=C/T;version=Hapmap2;RS=rs806272002;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	145126237	145126336	.	+	.	Name=Height_above_ear;B73v2_pos=5:142399069;1allele=A/G;version=Hapmap2;RS=rs828959877;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	145138910	145139009	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:142410692;1allele=G/A;version=Hapmap2;RS=rs820316181;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	145152314	145152413	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:142420909;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	145152681	145152780	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:142421276;1allele=A/G;version=Hapmap2;RS=rs277848658;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	145152938	145153037	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:142421533;1allele=C/T;version=Hapmap2;RS=rs277848666;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	145154656	145154755	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:142423251;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	145319281	145319380	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:142588507;1allele=T/C;version=Hapmap2;RS=rs839160520;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	145443686	145443785	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:142712018;1allele=T/A;version=Hapmap2;RS=rs807004712;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	145562578	145562677	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:142829010;1allele=T/C;version=Hapmap2;RS=rs810404807;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	145564758	145564857	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:142831190;1allele=A/G;version=Hapmap2;RS=rs828672442;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	145798986	145799085	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:143069849;1allele=T/C;version=Hapmap2;RS=rs824754853;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	145806318	145806417	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:143077181;1allele=C/G;version=Hapmap2;RS=rs805186012;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	145892584	145892683	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:143162532;1allele=A/G;version=Hapmap2;RS=rs845865061;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	145895036	145895135	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:143164984;1allele=G/A;version=Hapmap2;RS=rs814185988;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	145895886	145895985	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:143165834;1allele=C/A;version=Hapmap2;RS=rs130116652;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	145897731	145897830	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:143167679;1allele=G/A;version=Hapmap2;RS=rs809513228;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	145922654	145922753	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:143191012;1allele=C/T;version=Hapmap2;RS=rs805830789;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	145933135	145933234	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:143201494;1allele=C/T;version=Hapmap2;RS=rs824046242;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	145965076	145965175	.	+	.	Name=Ear_row_number;B73v2_pos=5:143233810;1allele=A/G;version=Hapmap2;RS=rs834658407;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	146288844	146288943	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:143559818;1allele=C/T;version=Hapmap2;RS=rs847107234;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	146316799	146316898	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:143587770;1allele=T/C;version=Hapmap2;RS=rs277850777;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	146323239	146323338	.	+	.	Name=Plant_height;B73v2_pos=5:143594645;1allele=C/T;version=Hapmap2;RS=rs817807614;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	146657075	146657174	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:143905639;1allele=C/T;version=Hapmap1;RS=rs132228356;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	146714066	146714165	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:143954576;1allele=A/T;version=Hapmap2;RS=rs845922214;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	146753452	146753551	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:143994117;1allele=C/T;version=Hapmap2;RS=rs1062144902;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	146818011	146818110	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:144058504;1allele=C/A;version=Hapmap2;RS=rs277852064;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	146926449	146926548	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:144168819;1allele=C/T;version=Hapmap2;RS=rs277852562;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	147004687	147004786	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:144240576;1allele=C/T;version=Hapmap2;RS=rs277852803;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	147038064	147038163	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:144279548;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147043574	147043673	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:144285058;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147044031	147044130	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:144285515;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147044031	147044130	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:144285515;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147044049	147044148	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:144285533;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147061976	147062075	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:144303995;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147062087	147062186	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:144304106;1allele=G/T;version=Hapmap2;RS=rs130118647;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	147068619	147068718	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:144310638;1allele=G/A;version=Hapmap2;RS=rs277852924;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	147123257	147123356	.	+	.	Name=Ear_height;B73v2_pos=5:144337141;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147200792	147200891	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:144443065;1allele=G/T;version=Hapmap2;RS=rs838562255;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	147670817	147670916	.	+	.	Name=Height_above_ear;B73v2_pos=5:144905394;1allele=A/G;version=Hapmap2;RS=rs812765868;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	147680715	147680814	.	+	.	Name=Days_to_silk;B73v2_pos=5:144914731;1allele=G/A;version=Hapmap2;RS=rs809335196;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	147765864	147765963	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:144993363;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	147771855	147771954	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:145000640;1allele=T/C;version=Hapmap2;RS=rs804531680;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	147819602	147819701	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:145044364;1allele=G/A;version=Hapmap2;RS=rs1061158761;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	147819836	147819935	.	+	.	Name=Height_above_ear;B73v2_pos=5:145044598;1allele=C/T;version=Hapmap2;RS=rs277853888;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	147840284	147840383	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:145065049;1allele=A/G;version=Hapmap2;RS=rs842763100;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	147898409	147898508	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:145114723;1allele=A/C;version=Hapmap2;RS=rs805695898;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	148004953	148005052	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:145219913;1allele=T/C;version=Hapmap2;RS=rs822424504;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	148050927	148051026	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:145261016;1allele=G/A;version=Hapmap2;RS=rs821063353;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	148097820	148097919	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:145347060;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	148511158	148511257	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:145716047;1allele=T/C;version=Hapmap2;RS=rs837475135;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	149063559	149063658	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:146259227;1allele=C/A;version=Hapmap1;RS=rs132229617;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	149128386	149128485	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:146363770;1allele=A/G;version=Hapmap2;RS=rs830069821;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	149340173	149340272	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:146532212;1allele=C/A;version=Hapmap2;RS=rs815612513;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	149408310	149408409	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:146593617;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	149534880	149534979	.	+	.	Name=Total_amino_acids;B73v2_pos=5:146712550;1allele=G/A;version=Hapmap2;RS=rs821743504;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	149716878	149716977	.	+	.	Name=Leaf_length;B73v2_pos=5:146885157;1allele=G/A;version=Hapmap1;RS=rs850490401;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	149726061	149726160	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:146894340;1allele=A/C;version=Hapmap2;RS=rs727043974;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	149905080	149905179	.	+	.	Name=Glucose;B73v2_pos=5:147085942;1allele=A/T;version=Hapmap2;RS=rs1061624986;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	149935636	149935735	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:147117025;1allele=T/C;version=Hapmap2;RS=rs277857102;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	150315591	150315690	.	+	.	Name=Glucose;B73v2_pos=5:147478856;1allele=C/T;version=Hapmap2;RS=rs130123707;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	150621774	150621873	.	+	.	Name=Ear_row_number;B73v2_pos=5:147799254;1allele=C/T;version=Hapmap2;RS=rs1064590319;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	151138481	151138580	.	+	.	Name=Ear_row_number;B73v2_pos=5:148306940;1allele=T/C;version=Hapmap2;RS=rs277860073;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	151166219	151166318	.	+	.	Name=Starch;B73v2_pos=5:148338208;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	151308263	151308362	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:148475672;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	151380437	151380536	.	+	.	Name=Leaf_length;B73v2_pos=5:148555505;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	151568321	151568420	.	+	.	Name=Starch;B73v2_pos=5:148711463;1allele=T/C;version=Hapmap2;RS=rs848014118;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	151611368	151611467	.	+	.	Name=Protein;B73v2_pos=5:148753049;1allele=C/T;version=Hapmap2;RS=rs801790860;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	152340621	152340720	.	+	.	Name=Ear_row_number;B73v2_pos=5:149309542;1allele=A/G;version=Hapmap2;RS=rs827192971;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	152447636	152447735	.	+	.	Name=Ear_row_number;B73v2_pos=5:149418294;1allele=C/T;version=Hapmap2;RS=rs1062327133;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	152737467	152737566	.	+	.	Name=Ear_row_number;B73v2_pos=5:149703612;1allele=C/T;version=Hapmap2;RS=rs843830147;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	152779075	152779174	.	+	.	Name=Ear_row_number;B73v2_pos=5:149745225;1allele=A/T;version=Hapmap2;RS=rs806229318;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	152969128	152969227	.	+	.	Name=Ear_row_number;B73v2_pos=5:149938240;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153088143	153088242	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:150053834;1allele=G/T;version=Hapmap2;RS=rs1061688715;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	153229063	153229162	.	+	.	Name=Cob_diameter;B73v2_pos=5:150192359;1allele=C/T;version=Hapmap2;RS=rs810094068;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	153265339	153265438	.	+	.	Name=Ear_row_number;B73v2_pos=5:150230208;1allele=C/T;version=Hapmap1;RS=rs130126994;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	153288686	153288785	.	+	.	Name=Ear_row_number;B73v2_pos=5:150255013;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153288823	153288922	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:150255150;1allele=C/T;version=Hapmap2;RS=rs277862482;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	153289542	153289641	.	+	.	Name=Ear_row_number;B73v2_pos=5:150255869;1allele=T/C;version=Hapmap2;RS=rs846820240;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	153308455	153308554	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:150272926;1allele=A/G;version=Hapmap2;RS=rs843442747;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	153345386	153345485	.	+	.	Name=Ear_row_number;B73v2_pos=5:150331010;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153411313	153411412	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:150355239;1allele=G/A;version=Hapmap2;RS=rs835743562;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	153647087	153647186	.	+	.	Name=Starch;B73v2_pos=5:150583516;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153853073	153853172	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:150843797;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153862514	153862613	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:150834353;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153910951	153911050	.	+	.	Name=Cob_diameter;B73v2_pos=5:150785851;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153916959	153917058	.	+	.	Name=Cob_diameter;B73v2_pos=5:150779843;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153925613	153925712	.	+	.	Name=Cob_diameter;B73v2_pos=5:150771187;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	153988758	153988857	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:150899488;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	154109461	154109560	.	+	.	Name=Height_above_ear;B73v2_pos=5:151005336;1allele=C/T;version=Hapmap2;RS=rs841079236;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	154387065	154387164	.	+	.	Name=Tassel_length;B73v2_pos=5:151302740;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	154443547	154443646	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:151271220;1allele=A/G;version=Hapmap2;RS=rs848243215;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	154560550	154560649	.	+	.	Name=Total_amino_acids;B73v2_pos=5:151410155;1allele=T/G;version=Hapmap2;RS=rs130127822;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	154605191	154605290	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:151455131;1allele=G/C;version=Hapmap2;RS=rs848446226;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	154640615	154640714	.	+	.	Name=Starch;B73v2_pos=5:151490561;1allele=G/A;version=Hapmap2;RS=rs839035404;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	154709790	154709889	.	+	.	Name=Height_above_ear;B73v2_pos=5:151542203;1allele=C/T;version=Hapmap2;RS=rs277865190;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	154709790	154709889	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:151542203;1allele=C/T;version=Hapmap2;RS=rs277865190;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	154764611	154764710	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:151595924;1allele=C/T;version=Hapmap2;RS=rs831086272;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	154804897	154804996	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:151636227;1allele=T/C;version=Hapmap2;RS=rs843171568;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	154878289	154878388	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:151710237;1allele=G/T;version=Hapmap2;RS=rs814558130;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	155147360	155147459	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:151977678;1allele=G/T;version=Hapmap2;RS=rs809873645;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	155384336	155384435	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:152206413;1allele=C/T;version=Hapmap2;RS=rs1064090007;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	155384448	155384547	.	+	.	Name=Days_to_silk;B73v2_pos=5:152206525;1allele=C/T;version=Hapmap2;RS=rs849232549;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	155454417	155454516	.	+	.	Name=Ear_height;B73v2_pos=5:152274630;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	155755385	155755484	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:152582338;1allele=C/T;version=Hapmap2;RS=rs132232080;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	155777995	155778094	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:152604950;1allele=T/C;version=Hapmap2;RS=rs813721128;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	155926743	155926842	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:152743800;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	155928580	155928679	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:152741963;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	155930776	155930875	.	+	.	Name=Days_to_silk;B73v2_pos=5:152739767;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	155953848	155953947	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:152777582;1allele=T/A;version=Hapmap2;RS=rs1064687490;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	156053580	156053679	.	+	.	Name=Days_to_silk;B73v2_pos=5:152878309;1allele=C/T;version=Hapmap1;RS=rs132232390;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	156123496	156123595	.	+	.	Name=Starch;B73v2_pos=5:152958580;1allele=G/T;version=Hapmap2;RS=rs828988155;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	156187111	156187210	.	+	.	Name=Days_to_silk;B73v2_pos=5:153022194;1allele=G/A;version=Hapmap2;RS=rs1060960483;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	156193305	156193404	.	+	.	Name=Days_to_silk;B73v2_pos=5:153028386;1allele=T/A;version=Hapmap2;RS=rs1061867893;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	156193319	156193418	.	+	.	Name=Days_to_silk;B73v2_pos=5:153028400;1allele=A/G;version=Hapmap2;RS=rs825442126;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	156199710	156199809	.	+	.	Name=Ear_height;B73v2_pos=5:153034791;1allele=G/C;version=Hapmap2;RS=rs844861602;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	156222103	156222202	.	+	.	Name=Days_to_silk;B73v2_pos=5:153057186;1allele=A/G;version=Hapmap2;RS=rs726568286;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	156255493	156255592	.	+	.	Name=Ear_height;B73v2_pos=5:153081030;1allele=T/G;version=Hapmap2;RS=rs834886627;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	156421706	156421805	.	+	.	Name=Days_to_silk;B73v2_pos=5:153238967;1allele=G/A;version=Hapmap2;RS=rs277866966;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	156602975	156603074	.	+	.	Name=Ear_row_number;B73v2_pos=5:153438746;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	156674982	156675081	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:153398176;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	156761681	156761780	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:153525474;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	156803236	156803335	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:153588027;1allele=T/A;version=Hapmap2;RS=rs1060925798;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	156881663	156881762	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:153666101;1allele=C/T;version=Hapmap2;RS=rs726646178;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	156883111	156883210	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:153667549;1allele=A/G;version=Hapmap2;RS=rs1061641675;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	157196543	157196642	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:153978820;1allele=A/G;version=Hapmap2;RS=rs277867308;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	157199844	157199943	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:153982121;1allele=A/C;version=Hapmap2;RS=rs805206881;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	157245031	157245130	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154027313;1allele=A/C;version=Hapmap2;RS=rs805921942;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	157245053	157245152	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154027335;1allele=G/A;version=Hapmap2;RS=rs1064664911;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	157302893	157302992	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154134791;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	157337703	157337802	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154099104;1allele=T/C;version=Hapmap2;RS=rs1063311246;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	157338305	157338404	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154098502;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	157346728	157346827	.	+	.	Name=Days_to_silk;B73v2_pos=5:154090078;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	157347916	157348015	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154088890;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	157350140	157350239	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154086664;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	157403022	157403121	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154193345;1allele=T/C;version=Hapmap2;RS=rs814438736;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	157408921	157409020	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154199244;1allele=T/A;version=Hapmap2;RS=rs725023914;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	157461001	157461100	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:154251326;1allele=T/C;version=Hapmap2;RS=rs838249515;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	157492623	157492722	.	+	.	Name=Days_to_silk;B73v2_pos=5:154281626;1allele=G/A;version=Hapmap2;RS=rs844394801;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	157644640	157644739	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:154427236;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	157644885	157644984	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:154427481;1allele=C/T;version=Hapmap2;RS=rs727489239;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	157680837	157680936	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:154463443;1allele=T/C;version=Hapmap2;RS=rs820181967;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	157981739	157981838	.	+	.	Name=Ear_row_number;B73v2_pos=5:154691493;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	158054022	158054121	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:154828324;1allele=A/G;version=Hapmap2;RS=rs847643912;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	158258257	158258356	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:155022239;1allele=C/T;version=Hapmap2;RS=rs819020773;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	158258895	158258994	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:155022877;1allele=A/C;version=Hapmap2;RS=rs832399291;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	158332285	158332384	.	+	.	Name=Glucose;B73v2_pos=5:155096524;1allele=T/G;version=Hapmap2;RS=rs130130235;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	158332630	158332729	.	+	.	Name=Days_to_silk;B73v2_pos=5:155096869;1allele=T/A;version=Hapmap2;RS=rs132233196;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	158333010	158333109	.	+	.	Name=Days_to_silk;B73v2_pos=5:155097249;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	158337262	158337361	.	+	.	Name=Days_to_silk;B73v2_pos=5:155101499;1allele=T/G;version=Hapmap2;RS=rs818495774;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	158485533	158485632	.	+	.	Name=Glucose;B73v2_pos=5:155250956;1allele=G/A;version=Hapmap2;RS=rs811938643;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	158585315	158585414	.	+	.	Name=Days_to_silk;B73v2_pos=5:155346431;1allele=G/A;version=Hapmap2;RS=rs850505943;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	158655314	158655413	.	+	.	Name=Days_to_silk;B73v2_pos=5:155414442;1allele=C/A;version=Hapmap2;RS=rs814925526;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	158657997	158658096	.	+	.	Name=Days_to_silk;B73v2_pos=5:155417123;1allele=G/T;version=Hapmap2;RS=rs726567771;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	158659442	158659541	.	+	.	Name=Days_to_silk;B73v2_pos=5:155418566;1allele=T/A;version=Hapmap2;RS=rs725705177;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	158659486	158659585	.	+	.	Name=Days_to_silk;B73v2_pos=5:155418610;1allele=T/A;version=Hapmap2;RS=rs727072422;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	158675118	158675217	.	+	.	Name=Height_above_ear;B73v2_pos=5:155434242;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	158764729	158764828	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:155525169;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	158766000	158766099	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:155526440;1allele=C/G;version=Hapmap2;RS=rs132233440;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	158768418	158768517	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:155528858;1allele=A/C;version=Hapmap1;RS=rs132233470;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	159055410	159055509	.	+	.	Name=Malate;B73v2_pos=5:155811526;1allele=G/A;version=Hapmap2;RS=rs830558695;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	159068801	159068900	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:155824917;1allele=A/G;version=Hapmap1;RS=rs132233574;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	159166426	159166525	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:155961748;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	159174697	159174796	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:155953475;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	159343106	159343205	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:156088831;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	159398548	159398647	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:156136116;1allele=A/C;version=Hapmap2;RS=rs132233666;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	159473418	159473517	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:156220319;1allele=C/T;version=Hapmap2;RS=rs847082539;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	159475012	159475111	.	+	.	Name=Sucrose;B73v2_pos=5:156221913;1allele=A/G;version=Hapmap2;RS=rs822615200;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	159602119	159602218	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:156351142;1allele=+/-;version=Hapmap2;RS=rs833529270;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	160017790	160017889	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:197136911;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	160164280	160164379	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:156943243;1allele=C/T;version=Hapmap2;RS=rs130131482;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	160317847	160317946	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:157088218;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	160386922	160387021	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:157152353;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	160387865	160387964	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:157153296;1allele=T/G;version=Hapmap2;RS=rs801928044;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	160440122	160440221	.	+	.	Name=Height_above_ear;B73v2_pos=5:157193125;1allele=A/G;version=Hapmap2;RS=rs829936160;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	160517445	160517544	.	+	.	Name=Days_to_silk;B73v2_pos=5:157284154;1allele=A/G;version=Hapmap2;RS=rs838728599;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	160623503	160623602	.	+	.	Name=Tassel_length;B73v2_pos=5:157389278;1allele=C/T;version=Hapmap2;RS=rs813659733;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	160627990	160628089	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:157393765;1allele=T/A;version=Hapmap2;RS=rs844742895;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	160746934	160747033	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:157515800;1allele=G/C;version=Hapmap1;RS=rs132234346;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	161102680	161102779	.	+	.	Name=Days_to_silk;B73v2_pos=5:157862403;1allele=A/G;version=Hapmap2;RS=rs838246012;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	161196916	161197015	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:158024453;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	161201531	161201630	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:158029055;1allele=G/A;version=Hapmap2;RS=rs130132307;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	161215098	161215197	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:158042622;1allele=C/G;version=Hapmap2;RS=rs846872447;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	161417478	161417577	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:158238884;1allele=T/A;version=Hapmap2;RS=rs819123580;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	161545580	161545679	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:158363956;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	161563552	161563651	.	+	.	Name=Height_above_ear;B73v2_pos=5:158381959;1allele=A/G;version=Hapmap2;RS=rs277872998;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	161563908	161564007	.	+	.	Name=Height_above_ear;B73v2_pos=5:158382315;1allele=G/A;version=Hapmap2;RS=rs277873002;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	161811074	161811173	.	+	.	Name=Sucrose;B73v2_pos=5:158625222;1allele=C/T;version=Hapmap2;RS=rs806532770;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	161861083	161861182	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:158680245;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	161862395	161862494	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:158681557;1allele=C/T;version=Hapmap2;RS=rs724251752;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	161863590	161863689	.	+	.	Name=Height_above_ear;B73v2_pos=5:158682752;1allele=T/C;version=Hapmap2;RS=rs277873538;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	161863982	161864081	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:158683144;1allele=A/G;version=Hapmap2;RS=rs1060737855;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	161864334	161864433	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:158683496;1allele=A/G;version=Hapmap2;RS=rs724995684;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	161864504	161864603	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:158683666;1allele=T/C;version=Hapmap2;RS=rs727024440;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	161864881	161864980	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:158684043;1allele=T/C;version=Hapmap2;RS=rs820917311;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	161864925	161865024	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:158684087;1allele=C/T;version=Hapmap1;RS=rs132234656;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	161866303	161866402	.	+	.	Name=Days_to_silk;B73v2_pos=5:158685465;1allele=C/A;version=Hapmap2;RS=rs277873560;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	161866303	161866402	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:158685465;1allele=C/A;version=Hapmap2;RS=rs277873560;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	162543018	162543117	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:159348998;1allele=A/G;version=Hapmap2;RS=rs804198093;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	162735144	162735243	.	+	.	Name=Height_above_ear;B73v2_pos=5:159540604;1allele=T/G;version=Hapmap2;RS=rs277875032;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	162789151	162789250	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:159595166;1allele=C/T;version=Hapmap2;RS=rs835169847;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	162964304	162964403	.	+	.	Name=Height_above_ear;B73v2_pos=5:159709231;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	162965838	162965937	.	+	.	Name=Height_above_ear;B73v2_pos=5:159707697;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	163142134	163142233	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:159956396;1allele=A/G;version=Hapmap2;RS=rs840800839;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163142134	163142233	.	+	.	Name=Days_to_silk;B73v2_pos=5:159956396;1allele=A/G;version=Hapmap2;RS=rs840800839;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163142929	163143028	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:159957191;1allele=A/G;version=Hapmap2;RS=rs801716697;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163142929	163143028	.	+	.	Name=Days_to_silk;B73v2_pos=5:159957191;1allele=A/G;version=Hapmap2;RS=rs801716697;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163149098	163149197	.	+	.	Name=Ear_row_number;B73v2_pos=5:159963360;1allele=C/T;version=Hapmap2;RS=rs823694917;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	163217347	163217446	.	+	.	Name=Days_to_silk;B73v2_pos=5:160032014;1allele=T/C;version=Hapmap2;RS=rs813928574;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	163225448	163225547	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:160072358;1allele=C/T;version=Hapmap2;RS=rs132235570;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	163225448	163225547	.	+	.	Name=Days_to_silk;B73v2_pos=5:160072358;1allele=C/T;version=Hapmap2;RS=rs132235570;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	163235001	163235100	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:160081911;1allele=T/G;version=Hapmap2;RS=rs835124786;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	163245329	163245428	.	+	.	Name=Ear_height;B73v2_pos=5:160092173;1allele=C/A;version=Hapmap2;RS=rs845087530;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	163355800	163355899	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:160164804;1allele=-/+;version=Hapmap2;RS=rs846239545;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	163359459	163359558	.	+	.	Name=Malate;B73v2_pos=5:160168464;1allele=C/G;version=Hapmap2;RS=rs277875391;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	163361606	163361705	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:160171027;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	163363931	163364030	.	+	.	Name=Malate;B73v2_pos=5:160173352;1allele=C/A;version=Hapmap2;RS=rs132235706;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163419383	163419482	.	+	.	Name=Height_above_ear;B73v2_pos=5:160225633;1allele=T/G;version=Hapmap1;RS=rs132235731;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	163424031	163424130	.	+	.	Name=Starch;B73v2_pos=5:160230283;1allele=T/C;version=Hapmap2;RS=rs827078409;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	163527017	163527116	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:160332901;1allele=C/G;version=Hapmap2;RS=rs277875564;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	163548604	163548703	.	+	.	Name=Height_above_ear;B73v2_pos=5:160354489;1allele=A/T;version=Hapmap2;RS=rs813243831;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	163558287	163558386	.	+	.	Name=Height_above_ear;B73v2_pos=5:160364173;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	163762227	163762326	.	+	.	Name=Malate;B73v2_pos=5:160578281;1allele=G/A;version=Hapmap2;RS=rs277876020;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163764996	163765095	.	+	.	Name=Starch;B73v2_pos=5:160581050;1allele=-/+;version=Hapmap2;RS=rs817816813;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163796158	163796257	.	+	.	Name=Days_to_silk;B73v2_pos=5:160612214;1allele=G/A;version=Hapmap2;RS=rs725734229;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	163811724	163811823	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:160627781;1allele=C/T;version=Hapmap2;RS=rs277876239;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	163811792	163811891	.	+	.	Name=Height_above_ear;B73v2_pos=5:160627849;1allele=T/G;version=Hapmap2;RS=rs277876241;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	163813136	163813235	.	+	.	Name=Starch;B73v2_pos=5:160629193;1allele=C/T;version=Hapmap2;RS=rs130135238;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	163813136	163813235	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:160629193;1allele=C/T;version=Hapmap2;RS=rs130135238;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	163841240	163841339	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:160657848;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	163842699	163842798	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:160659307;1allele=C/T;version=Hapmap2;RS=rs130135308;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	163882423	163882522	.	+	.	Name=Malate;B73v2_pos=5:160699032;1allele=A/G;version=Hapmap2;RS=rs1064620152;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	163890088	163890187	.	+	.	Name=Nitrate;B73v2_pos=5:160719308;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	163902658	163902757	.	+	.	Name=Starch;B73v2_pos=5:160706738;1allele=G/A;version=Hapmap2;RS=rs816215676;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	163903450	163903549	.	+	.	Name=Nitrate;B73v2_pos=5:160705946;1allele=A/T;version=Hapmap2;RS=rs810926630;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	163922924	163923023	.	+	.	Name=Starch;B73v2_pos=5:160736667;1allele=C/A;version=Hapmap2;RS=rs812529634;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	163938465	163938564	.	+	.	Name=Starch;B73v2_pos=5:160752209;1allele=G/C;version=Hapmap2;RS=rs822996096;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	163947773	163947872	.	+	.	Name=Glucose;B73v2_pos=5:160761517;1allele=G/T;version=Hapmap2;RS=rs812821506;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	163980232	163980331	.	+	.	Name=Nitrate;B73v2_pos=5:160793978;1allele=G/A;version=Hapmap2;RS=rs830375602;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	163985396	163985495	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:160799142;1allele=G/A;version=Hapmap2;RS=rs829220756;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	164093147	164093246	.	+	.	Name=Ear_height;B73v2_pos=5:160911600;1allele=C/T;version=Hapmap2;RS=rs277876983;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	164093147	164093246	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:160911600;1allele=C/T;version=Hapmap2;RS=rs277876983;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	164342767	164342866	.	+	.	Name=Nitrate;B73v2_pos=5:161155135;1allele=G/A;version=Hapmap2;RS=rs825092493;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	164382867	164382966	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:161194840;1allele=T/C;version=Hapmap2;RS=rs132236117;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	164383008	164383107	.	+	.	Name=Ear_height;B73v2_pos=5:161194981;1allele=G/A;version=Hapmap1;RS=rs132236120;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	164383008	164383107	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:161194981;1allele=G/A;version=Hapmap2;RS=rs132236120;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	164383344	164383443	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:161195317;1allele=C/G;version=Hapmap2;RS=rs804312501;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	164383344	164383443	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:161195317;1allele=C/G;version=Hapmap2;RS=rs804312501;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	164383391	164383490	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:161195364;1allele=G/A;version=Hapmap2;RS=rs277877568;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	164384043	164384142	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:161196016;1allele=A/G;version=Hapmap2;RS=rs820621636;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	164384043	164384142	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:161196016;1allele=A/G;version=Hapmap2;RS=rs820621636;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	164384078	164384177	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:161196051;1allele=+/-;version=Hapmap2;RS=rs816230888;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	164420270	164420369	.	+	.	Name=Nitrate;B73v2_pos=5:161252306;1allele=C/T;version=Hapmap2;RS=rs832166510;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	164445372	164445471	.	+	.	Name=Nitrate;B73v2_pos=5:161202858;1allele=C/T;version=Hapmap1;RS=rs806045930;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	164795621	164795720	.	+	.	Name=Starch;B73v2_pos=5:161583354;1allele=C/T;version=Hapmap2;RS=rs724913267;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	165185473	165185572	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:161934805;1allele=G/A;version=Hapmap2;RS=rs805685519;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	165308839	165308938	.	+	.	Name=Ear_height;B73v2_pos=5:162023934;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	165332960	165333059	.	+	.	Name=Starch;B73v2_pos=5:162093295;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	165666336	165666435	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:162432923;1allele=C/T;version=Hapmap2;RS=rs277878089;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	165946027	165946126	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:162688044;1allele=T/A;version=Hapmap2;RS=rs801642847;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	165947805	165947904	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:162689822;1allele=G/A;version=Hapmap2;RS=rs130136655;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	165965288	165965387	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:162707305;1allele=G/A;version=Hapmap2;RS=rs828057287;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	166014402	166014501	.	+	.	Name=Fructose;B73v2_pos=5:162760350;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	166078340	166078439	.	+	.	Name=Height_above_ear;B73v2_pos=5:162818317;1allele=T/C;version=Hapmap2;RS=rs130136966;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	166093999	166094098	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:162833977;1allele=A/G;version=Hapmap1;RS=rs132236711;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	166093999	166094098	.	+	.	Name=Height_above_ear;B73v2_pos=5:162833977;1allele=A/G;version=Hapmap1;RS=rs132236711;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	166097775	166097874	.	+	.	Name=Malate;B73v2_pos=5:162837753;1allele=T/C;version=Hapmap2;RS=rs277878600;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	166273075	166273174	.	+	.	Name=Height_above_ear;B73v2_pos=5:163004006;1allele=A/G;version=Hapmap2;RS=rs130136992;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	166312683	166312782	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:163053052;1allele=G/A;version=Hapmap2;RS=rs819611472;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	166318355	166318454	.	+	.	Name=Nitrate;B73v2_pos=5:163058724;1allele=A/T;version=Hapmap2;RS=rs802102061;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	166390915	166391014	.	+	.	Name=Height_above_ear;B73v2_pos=5:163119699;1allele=G/A;version=Hapmap1;RS=rs130137053;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	166402783	166402882	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:163131567;1allele=A/G;version=Hapmap2;RS=rs840606386;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	166438142	166438241	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:163166927;1allele=G/A;version=Hapmap2;RS=rs818372305;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	166502437	166502536	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:163229123;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	166566935	166567034	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:163293302;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	166566935	166567034	.	+	.	Name=Height_above_ear;B73v2_pos=5:163293302;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	166675056	166675155	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:163409359;1allele=T/C;version=Hapmap1;RS=rs130137322;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	166675590	166675689	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:163409893;1allele=TGTGCC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	166696997	166697096	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:163438150;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	166710215	166710314	.	+	.	Name=Ear_height;B73v2_pos=5:163397194;1allele=C/T;version=Hapmap2;RS=rs813578680;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	166793710	166793809	.	+	.	Name=Ear_height;B73v2_pos=5:163507879;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	166877430	166877529	.	+	.	Name=Nitrate;B73v2_pos=5:163598072;1allele=G/T;version=Hapmap2;RS=rs812851665;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	166895020	166895119	.	+	.	Name=Ear_height;B73v2_pos=5:163610224;1allele=C/T;version=Hapmap2;RS=rs132237188;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	166895428	166895527	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:163610632;1allele=C/T;version=Hapmap2;RS=rs725282389;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	167003059	167003158	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:163717475;1allele=G/A;version=Hapmap2;RS=rs840392854;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167004459	167004558	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:163718875;1allele=C/G;version=Hapmap2;RS=rs830409287;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	167024335	167024434	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:163738752;1allele=A/G;version=Hapmap2;RS=rs277880219;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167130016	167130115	.	+	.	Name=Nitrate;B73v2_pos=5:163845043;1allele=C/G;version=Hapmap2;RS=rs809143731;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	167242731	167242830	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:163940943;1allele=A/T;version=Hapmap2;RS=rs835899780;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	167281068	167281167	.	+	.	Name=Height_above_ear;B73v2_pos=5:163980239;1allele=G/A;version=Hapmap2;RS=rs277880717;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167281197	167281296	.	+	.	Name=Height_above_ear;B73v2_pos=5:163980368;1allele=C/T;version=Hapmap2;RS=rs132237434;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	167433571	167433670	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164130050;1allele=G/A;version=Hapmap2;RS=rs130138539;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	167436016	167436115	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164132497;1allele=A/G;version=Hapmap2;RS=rs826488530;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167515504	167515603	.	+	.	Name=Ear_height;B73v2_pos=5:164223424;1allele=G/A;version=Hapmap2;RS=rs840651743;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167534735	167534834	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164315660;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	167563780	167563879	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:164255928;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	167569064	167569163	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:164272973;1allele=C/T;version=Hapmap2;RS=rs277881388;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	167670757	167670856	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164370654;1allele=A/G;version=Hapmap2;RS=rs814814924;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	167773714	167773813	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164480058;1allele=G/A;version=Hapmap2;RS=rs277881959;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167774038	167774137	.	+	.	Name=Height_above_ear;B73v2_pos=5:164480382;1allele=G/A;version=Hapmap2;RS=rs277881965;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167774038	167774137	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164480382;1allele=G/A;version=Hapmap2;RS=rs277881965;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	167774182	167774281	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164480526;1allele=T/C;version=Hapmap2;RS=rs828311838;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	167807345	167807444	.	+	.	Name=Height_above_ear;B73v2_pos=5:164513702;1allele=T/C;version=Hapmap2;RS=rs826154150;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	167822850	167822949	.	+	.	Name=Height_above_ear;B73v2_pos=5:164529210;1allele=T/G;version=Hapmap2;RS=rs821105021;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	167825302	167825401	.	+	.	Name=Height_above_ear;B73v2_pos=5:164531662;1allele=C/T;version=Hapmap2;RS=rs132237821;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	167825387	167825486	.	+	.	Name=Height_above_ear;B73v2_pos=5:164531747;1allele=C/T;version=Hapmap2;RS=rs130138817;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	167941003	167941102	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:164649245;1allele=C/T;version=Hapmap2;RS=rs807497254;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	167943153	167943252	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164651395;1allele=G/C;version=Hapmap2;RS=rs132237863;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	167966223	167966322	.	+	.	Name=Nitrate;B73v2_pos=4:157540019;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	168024038	168024137	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164730868;1allele=T/C;version=Hapmap2;RS=rs809564778;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	168025279	168025378	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:164732111;1allele=T/C;version=Hapmap2;RS=rs819718417;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	168087763	168087862	.	+	.	Name=Nitrate;B73v2_pos=5:164799453;1allele=C/T;version=Hapmap2;RS=rs845872954;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	168102146	168102245	.	+	.	Name=Height_above_ear;B73v2_pos=5:164813848;1allele=G/C;version=Hapmap2;RS=rs825580699;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	168102147	168102246	.	+	.	Name=Height_above_ear;B73v2_pos=5:164813849;1allele=T/C;version=Hapmap2;RS=rs813838010;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	168109514	168109613	.	+	.	Name=Nitrate;B73v2_pos=5:164818744;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	168139175	168139274	.	+	.	Name=Nitrate;B73v2_pos=5:164858409;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	168140258	168140357	.	+	.	Name=Total_amino_acids;B73v2_pos=5:164857326;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	168200663	168200762	.	+	.	Name=Nitrate;B73v2_pos=5:164910051;1allele=C/T;version=Hapmap2;RS=rs829849702;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	168222399	168222498	.	+	.	Name=Ear_row_number;B73v2_pos=5:164931093;1allele=A/G;version=Hapmap2;RS=rs726171518;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	169216686	169216785	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:165961934;1allele=G/C;version=Hapmap2;RS=rs1062363361;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	169229449	169229548	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:165974697;1allele=A/G;version=Hapmap2;RS=rs828294079;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	169229710	169229809	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:165974958;1allele=T/G;version=Hapmap2;RS=rs277883403;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	169230013	169230112	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:165975261;1allele=A/G;version=Hapmap2;RS=rs277883412;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	169230067	169230166	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:165975315;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	169232182	169232281	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:165977430;1allele=C/T;version=Hapmap2;RS=rs277883433;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	169235449	169235548	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:165980697;1allele=G/A;version=Hapmap2;RS=rs807617716;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	169638423	169638522	.	+	.	Name=Leaf_length;B73v2_pos=5:166350150;1allele=G/A;version=Hapmap1;RS=rs132239034;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	169760023	169760122	.	+	.	Name=Days_to_silk;B73v2_pos=5:166471424;1allele=C/T;version=Hapmap2;RS=rs832899181;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	169799480	169799579	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:166512898;1allele=C/T;version=Hapmap2;RS=rs832817338;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	169799480	169799579	.	+	.	Name=Fructose;B73v2_pos=5:166512898;1allele=C/T;version=Hapmap2;RS=rs832817338;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	169801166	169801265	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:166514584;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	169801819	169801918	.	+	.	Name=Ear_row_number;B73v2_pos=5:166515237;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	169824584	169824683	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:166537869;1allele=A/G;version=Hapmap2;RS=rs840936524;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	169863273	169863372	.	+	.	Name=Leaf_width;B73v2_pos=5:166575956;1allele=A/G;version=Hapmap2;RS=rs811272830;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	169867499	169867598	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:166580182;1allele=G/A;version=Hapmap2;RS=rs801992821;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	169924913	169925012	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:166634699;1allele=T/C;version=Hapmap2;RS=rs277884950;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	169933533	169933632	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:166643320;1allele=T/A;version=Hapmap2;RS=rs839688352;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	170063954	170064053	.	+	.	Name=Days_to_silk;B73v2_pos=5:166806768;1allele=T/C;version=Hapmap2;RS=rs817246119;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	170110707	170110806	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:166854304;1allele=C/T;version=Hapmap2;RS=rs815633678;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	170115887	170115986	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:166859482;1allele=G/C;version=Hapmap2;RS=rs1062435280;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	170120511	170120610	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:166864106;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	170149850	170149949	.	+	.	Name=Starch;B73v2_pos=5:166893450;1allele=T/G;version=Hapmap2;RS=rs849340281;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	170182471	170182570	.	+	.	Name=Days_to_silk;B73v2_pos=5:166925595;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	170208123	170208222	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:166951202;1allele=G/A;version=Hapmap2;RS=rs808557581;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	170210753	170210852	.	+	.	Name=Starch;B73v2_pos=5:166953832;1allele=A/G;version=Hapmap2;RS=rs1061780401;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	170310566	170310665	.	+	.	Name=Leaf_width;B73v2_pos=5:167041546;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	170335421	170335520	.	+	.	Name=Total_amino_acids;B73v2_pos=5:167071488;1allele=G/A;version=Hapmap2;RS=rs836647384;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	170389968	170390067	.	+	.	Name=Starch;B73v2_pos=5:167124761;1allele=T/C;version=Hapmap2;RS=rs808082390;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	170427406	170427505	.	+	.	Name=Starch;B73v2_pos=5:167163136;1allele=T/C;version=Hapmap2;RS=rs847624774;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	170442725	170442824	.	+	.	Name=Starch;B73v2_pos=5:167178482;1allele=G/T;version=Hapmap2;RS=rs831130116;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	170464417	170464516	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:167200169;1allele=T/C;version=Hapmap2;RS=rs1061251048;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	170514301	170514400	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:167245391;1allele=C/A;version=Hapmap2;RS=rs830940364;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	170514537	170514636	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:167245627;1allele=T/C;version=Hapmap2;RS=rs277886088;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	170514591	170514690	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:167245681;1allele=C/T;version=Hapmap2;RS=rs828834335;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	170514798	170514897	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:167245888;1allele=C/G;version=Hapmap2;RS=rs132239786;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	170539344	170539443	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:167276273;1allele=A/G;version=Hapmap2;RS=rs840676596;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	170565355	170565454	.	+	.	Name=Starch;B73v2_pos=5:167293338;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	170697665	170697764	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:167429961;1allele=C/T;version=Hapmap2;RS=rs277886489;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	170884051	170884150	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:167583858;1allele=T/C;version=Hapmap1;RS=rs132240223;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	170945576	170945675	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:167656741;1allele=G/A;version=Hapmap2;RS=rs277886952;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	170952014	170952113	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:167663179;1allele=A/T;version=Hapmap2;RS=rs277887047;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	170952831	170952930	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:167663996;1allele=C/G;version=Hapmap2;RS=rs825839867;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	170953983	170954082	.	+	.	Name=Leaf_length;B73v2_pos=5:167665148;1allele=C/A;version=Hapmap1;RS=rs726732044;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	171579303	171579402	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:168281804;1allele=G/A;version=Hapmap2;RS=rs832208793;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	171750707	171750806	.	+	.	Name=Leaf_length;B73v2_pos=5:168449587;1allele=A/T;version=Hapmap2;RS=rs130142747;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	171893422	171893521	.	+	.	Name=Glucose;B73v2_pos=3:11928811;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	172146051	172146150	.	+	.	Name=Leaf_length;B73v2_pos=5:168838843;1allele=A/C;version=Hapmap2;RS=rs836625078;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	172196516	172196615	.	+	.	Name=Starch;B73v2_pos=5:168887986;1allele=G/A;version=Hapmap2;RS=rs132241838;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	172201942	172202041	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:168893412;1allele=G/C;version=Hapmap1;RS=rs132241917;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	172515546	172515645	.	+	.	Name=Ear_row_number;B73v2_pos=5:169207584;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	172673729	172673828	.	+	.	Name=Ear_row_number;B73v2_pos=5:169363641;1allele=A/G;version=Hapmap2;RS=rs1062668666;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	172684560	172684659	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:169374472;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	172950776	172950875	.	+	.	Name=Days_to_silk;B73v2_pos=5:169643270;1allele=C/A;version=Hapmap2;RS=rs802606411;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	173696714	173696813	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:170355076;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	173757449	173757548	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:170415815;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	173887200	173887299	.	+	.	Name=Leaf_length;B73v2_pos=5:170502216;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	173962311	173962410	.	+	.	Name=Nitrate;B73v2_pos=5:170596474;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	173995582	173995681	.	+	.	Name=Total_amino_acids;B73v2_pos=5:170628864;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174009338	174009437	.	+	.	Name=Plant_height;B73v2_pos=5:170642610;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174057726	174057825	.	+	.	Name=Nitrate;B73v2_pos=5:170690772;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174091956	174092055	.	+	.	Name=Plant_height;B73v2_pos=5:170725006;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174101004	174101103	.	+	.	Name=Nitrate;B73v2_pos=5:170734054;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174101566	174101665	.	+	.	Name=Nitrate;B73v2_pos=5:170734616;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174121215	174121314	.	+	.	Name=Plant_height;B73v2_pos=5:170754266;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174126210	174126309	.	+	.	Name=Nitrate;B73v2_pos=5:170759261;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174141926	174142025	.	+	.	Name=Nitrate;B73v2_pos=5:170775136;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174182595	174182694	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:170815810;1allele=C/T;version=Hapmap2;RS=rs130145053;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	174198430	174198529	.	+	.	Name=Nitrate;B73v2_pos=5:170831645;1allele=T/A;version=Hapmap2;RS=rs850268119;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	174348971	174349070	.	+	.	Name=Leaf_length;B73v2_pos=5:170969044;1allele=C/T;version=Hapmap2;RS=rs848287771;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	174349152	174349251	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:170969225;1allele=T/A;version=Hapmap2;RS=rs277891716;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	174349483	174349582	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:170969556;1allele=C/A;version=Hapmap2;RS=rs831946376;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	174357942	174358041	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:170978013;1allele=A/C;version=Hapmap1;RS=rs132243609;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	174358647	174358746	.	+	.	Name=Height_above_ear;B73v2_pos=5:170978718;1allele=A/T;version=Hapmap2;RS=rs1064056523;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	174433635	174433734	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:171057670;1allele=A/C;version=Hapmap2;RS=rs1064493164;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	174499178	174499277	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:171118230;1allele=T/C;version=Hapmap2;RS=rs824096413;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	174500750	174500849	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:171119802;1allele=C/G;version=Hapmap2;RS=rs130145414;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	174569788	174569887	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:171188975;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174654196	174654295	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:171273182;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	174654412	174654511	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:171273398;1allele=G/A;version=Hapmap2;RS=rs132244054;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	175181111	175181210	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:171803981;1allele=C/T;version=Hapmap2;RS=rs823433407;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	175290924	175291023	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:171910909;1allele=C/T;version=Hapmap2;RS=rs846365411;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	175293539	175293638	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:171913524;1allele=G/A;version=Hapmap2;RS=rs819704952;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	175296024	175296123	.	+	.	Name=Tassel_length;B73v2_pos=5:171916009;1allele=C/G;version=Hapmap2;RS=rs814052423;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	175348426	175348525	.	+	.	Name=Sucrose;B73v2_pos=5:171960038;1allele=T/C;version=Hapmap2;RS=rs840688276;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	175355095	175355194	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:171966707;1allele=C/T;version=Hapmap2;RS=rs826505369;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	175511171	175511270	.	+	.	Name=Tassel_length;B73v2_pos=5:172171969;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	175557944	175558043	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:172117075;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	175680268	175680367	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:172272531;1allele=T/G;version=Hapmap2;RS=rs277893724;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	175804867	175804966	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:172396781;1allele=G/A;version=Hapmap2;RS=rs804591672;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	175976255	175976354	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:172563632;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	176042747	176042846	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:172629244;1allele=C/T;version=Hapmap2;RS=rs829252966;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	176149640	176149739	.	+	.	Name=Tassel_length;B73v2_pos=5:172699234;1allele=G/A;version=Hapmap2;RS=rs835159985;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	176150919	176151018	.	+	.	Name=Ear_height;B73v2_pos=5:172700513;1allele=A/C;version=Hapmap2;RS=rs132245114;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	176222604	176222703	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:172798344;1allele=T/C;version=Hapmap2;RS=rs277894498;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	176362512	176362611	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:172937761;1allele=T/C;version=Hapmap2;RS=rs834967594;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	176501683	176501782	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:173077681;1allele=A/G;version=Hapmap2;RS=rs810507493;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	176502746	176502843	.	+	.	Name=Tassel_length;B73v2_pos=5:173078744;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	176536898	176536997	.	+	.	Name=Tassel_length;B73v2_pos=5:173101291;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	176837443	176837542	.	+	.	Name=Plant_height;B73v2_pos=5:173383308;1allele=C/G;version=Hapmap2;RS=rs810215463;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	176893731	176893830	.	+	.	Name=Leaf_width;B73v2_pos=5:173441027;1allele=T/C;version=Hapmap2;RS=rs802848154;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	177077030	177077129	.	+	.	Name=Stalk_strength;B73v2_pos=5:173617892;1allele=T/A;version=Hapmap2;RS=rs848803204;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	177289698	177289797	.	+	.	Name=Tassel_length;B73v2_pos=5:173863490;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	177397796	177397895	.	+	.	Name=Tassel_length;B73v2_pos=5:174014767;1allele=A/G;version=Hapmap2;RS=rs277896008;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	177455388	177455487	.	+	.	Name=Tassel_length;B73v2_pos=5:174067947;1allele=T/C;version=Hapmap2;RS=rs817970792;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	177460152	177460251	.	+	.	Name=Ear_height;B73v2_pos=5:174072711;1allele=C/T;version=Hapmap2;RS=rs805090108;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	177462742	177462841	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:174075301;1allele=T/C;version=Hapmap2;RS=rs823806179;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	177499693	177499792	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:174112254;1allele=C/A;version=Hapmap2;RS=rs816023752;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	177516261	177516360	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:174128818;1allele=T/C;version=Hapmap1;RS=rs132246100;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	177517297	177517396	.	+	.	Name=Leaf_length;B73v2_pos=5:174129854;1allele=G/C;version=Hapmap2;RS=rs814890336;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	177538779	177538878	.	+	.	Name=Tassel_length;B73v2_pos=5:174137467;1allele=T/C;version=Hapmap2;RS=rs132246511;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	177555550	177555649	.	+	.	Name=Tassel_length;B73v2_pos=5:174154238;1allele=C/A;version=Hapmap2;RS=rs819343130;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	177560829	177560928	.	+	.	Name=Tassel_length;B73v2_pos=5:174159517;1allele=A/C;version=Hapmap2;RS=rs832623724;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	177565067	177565166	.	+	.	Name=Tassel_length;B73v2_pos=5:174163755;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	177570996	177571095	.	+	.	Name=Tassel_length;B73v2_pos=5:174169684;1allele=G/A;version=Hapmap2;RS=rs837302667;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	177611836	177611935	.	+	.	Name=Tassel_length;B73v2_pos=5:174215636;1allele=T/C;version=Hapmap2;RS=rs828723794;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	177762589	177762688	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:174360893;1allele=G/T;version=Hapmap2;RS=rs826414732;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	178273875	178273974	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:174938861;1allele=T/G;version=Hapmap2;RS=rs845357481;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	178277651	178277750	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:174942637;1allele=G/T;version=Hapmap2;RS=rs846963623;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	178873236	178873335	.	+	.	Name=Tassel_length;B73v2_pos=5:175564407;1allele=G/A;version=Hapmap2;RS=rs831440934;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	178885968	178886067	.	+	.	Name=Sucrose;B73v2_pos=5:175585204;1allele=A/G;version=Hapmap1;RS=rs132247686;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	178897800	178897899	.	+	.	Name=Starch;B73v2_pos=5:175594423;1allele=G/A;version=Hapmap2;RS=rs277897910;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	178898469	178898568	.	+	.	Name=Stalk_strength;B73v2_pos=5:175595092;1allele=C/A;version=Hapmap2;RS=rs727273572;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	178904903	178905002	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:175601526;1allele=/GCGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	178905047	178905146	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:175601670;1allele=C/G;version=Hapmap1;RS=rs130149390;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	178965034	178965133	.	+	.	Name=Nitrate;B73v2_pos=5:175661657;1allele=G/T;version=Hapmap2;RS=rs813984788;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	178995889	178995988	.	+	.	Name=Stalk_strength;B73v2_pos=5:175691475;1allele=C/T;version=Hapmap2;RS=rs820909948;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	179008281	179008380	.	+	.	Name=Total_amino_acids;B73v2_pos=5:175703868;1allele=C/G;version=Hapmap2;RS=rs832022653;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	179011928	179012027	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:175707516;1allele=A/C;version=Hapmap2;RS=rs130149630;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	179171447	179171546	.	+	.	Name=Sucrose;B73v2_pos=5:175868570;1allele=T/C;version=Hapmap2;RS=rs130149991;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	179260790	179260889	.	+	.	Name=Stalk_strength;B73v2_pos=5:175958944;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	179383414	179383513	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:176080517;1allele=G/T;version=Hapmap2;RS=rs806299594;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	179383414	179383513	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:176080517;1allele=G/T;version=Hapmap2;RS=rs806299594;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	179480129	179480228	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:176154665;1allele=A/G;version=Hapmap2;RS=rs838040130;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	179481036	179481135	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:176155572;1allele=C/T;version=Hapmap2;RS=rs812577723;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	179623721	179623820	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:176311644;1allele=T/C;version=Hapmap2;RS=rs838338124;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	179624543	179624642	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:176312466;1allele=T/C;version=Hapmap2;RS=rs834765817;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	179624769	179624868	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:176312692;1allele=G/C;version=Hapmap2;RS=rs821464933;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	179635991	179636090	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:176323012;1allele=G/A;version=Hapmap2;RS=rs130150430;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	179640356	179640455	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:176327377;1allele=T/C;version=Hapmap1;RS=rs132248733;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	179640446	179640545	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:176327467;1allele=C/A;version=Hapmap2;RS=rs814638464;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	179640625	179640724	.	+	.	Name=Ear_height;B73v2_pos=5:176327646;1allele=C/T;version=Hapmap2;RS=rs130150455;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	179754203	179754302	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:176491582;1allele=C/A;version=Hapmap2;RS=rs820945474;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	179755236	179755335	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:176492615;1allele=C/A;version=Hapmap2;RS=rs823194417;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	179755936	179756035	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:176493315;1allele=C/T;version=Hapmap2;RS=rs820877275;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	179771827	179771926	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:176509210;1allele=A/T;version=Hapmap2;RS=rs833746758;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	179853508	179853607	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:176550501;1allele=A/T;version=Hapmap2;RS=rs130150688;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	179899511	179899610	.	+	.	Name=Tassel_length;B73v2_pos=5:176587295;1allele=T/G;version=Hapmap2;RS=rs839994519;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	179903438	179903537	.	+	.	Name=Tassel_length;B73v2_pos=5:176591222;1allele=T/A;version=Hapmap2;RS=rs810017031;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	179904948	179905047	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:176592732;1allele=A/G;version=Hapmap2;RS=rs130150848;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	179908015	179908114	.	+	.	Name=Stalk_strength;B73v2_pos=5:176595800;1allele=C/T;version=Hapmap2;RS=rs811412373;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	179996451	179996550	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:176684039;1allele=T/C;version=Hapmap2;RS=rs843966314;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	180052176	180052275	.	+	.	Name=Ear_row_number;B73v2_pos=5:176803618;1allele=T/C;version=Hapmap2;RS=rs277899575;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	180214096	180214195	.	+	.	Name=Tassel_length;B73v2_pos=5:176896031;1allele=C/T;version=Hapmap2;RS=rs277899839;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	180455715	180455788	.	+	.	Name=Stalk_strength;B73v2_pos=5:177125543;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	180649066	180649165	.	+	.	Name=Height_above_ear;B73v2_pos=5:177331106;1allele=C/G;version=Hapmap2;RS=rs840218408;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	180706446	180706545	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:177385131;1allele=A/G;version=Hapmap1;RS=rs132249686;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	181161643	181161742	.	+	.	Name=Ear_height;B73v2_pos=5:177844813;1allele=T/C;version=Hapmap2;RS=rs827506797;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	181172219	181172318	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:177855653;1allele=C/G;version=Hapmap2;RS=rs277901416;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	181366104	181366203	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:178031980;1allele=G/A;version=Hapmap2;RS=rs812495621;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	181494894	181494993	.	+	.	Name=Height_above_ear;B73v2_pos=5:178161463;1allele=G/T;version=Hapmap2;RS=rs810084343;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	181494920	181495019	.	+	.	Name=Height_above_ear;B73v2_pos=5:178161489;1allele=C/T;version=Hapmap2;RS=rs818448014;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	181546948	181547047	.	+	.	Name=Height_above_ear;B73v2_pos=5:178206529;1allele=C/G;version=Hapmap2;RS=rs814928997;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	181581220	181581319	.	+	.	Name=Height_above_ear;B73v2_pos=5:178240808;1allele=G/C;version=Hapmap2;RS=rs132250283;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	181583926	181584025	.	+	.	Name=Stalk_strength;B73v2_pos=5:178243514;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	181628959	181629058	.	+	.	Name=Height_above_ear;B73v2_pos=5:178296149;1allele=G/A;version=Hapmap2;RS=rs815065253;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	181707415	181707514	.	+	.	Name=Height_above_ear;B73v2_pos=5:178366225;1allele=T/C;version=Hapmap2;RS=rs810143774;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	181855734	181855833	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:178471467;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	181922333	181922432	.	+	.	Name=Plant_height;B73v2_pos=5:178581023;1allele=T/A;version=Hapmap2;RS=rs812634499;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	182020797	182020896	.	+	.	Name=Stalk_strength;B73v2_pos=5:178677602;1allele=G/A;version=Hapmap2;RS=rs832238683;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	182067741	182067840	.	+	.	Name=Height_above_ear;B73v2_pos=5:178740041;1allele=T/A;version=Hapmap2;RS=rs848445416;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	182349643	182349742	.	+	.	Name=Stalk_strength;B73v2_pos=5:178898761;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	182446017	182446116	.	+	.	Name=Height_above_ear;B73v2_pos=5:178923232;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	182885936	182886035	.	+	.	Name=Nitrate;B73v2_pos=5:179349885;1allele=C/T;version=Hapmap2;RS=rs809317115;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	183235293	183235392	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:179664415;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	183312499	183312598	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:179758650;1allele=A/C;version=Hapmap1;RS=rs132250700;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	183755483	183755582	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:180089917;1allele=G/A;version=Hapmap2;RS=rs805227872;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	183788982	183789081	.	+	.	Name=Total_amino_acids;B73v2_pos=5:180123421;1allele=A/G;version=Hapmap2;RS=rs815248716;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	183811458	183811557	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:180145897;1allele=G/A;version=Hapmap2;RS=rs130154967;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	184046909	184047008	.	+	.	Name=Starch;B73v2_pos=5:180369693;1allele=A/T;version=Hapmap1;RS=rs808818374;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	184072033	184072132	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:180396018;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	184095513	184095612	.	+	.	Name=Stalk_strength;B73v2_pos=5:180420890;1allele=G/A;version=Hapmap2;RS=rs830624709;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	184191060	184191159	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:180519824;1allele=T/C;version=Hapmap2;RS=rs277905214;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	184196635	184196734	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:180568424;1allele=T/C;version=Hapmap2;RS=rs828438267;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	184802917	184803016	.	+	.	Name=Height_above_ear;B73v2_pos=5:181089800;1allele=T/C;version=Hapmap2;RS=rs811492364;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	184906651	184906750	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:181192698;1allele=T/C;version=Hapmap2;RS=rs132252819;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	185109626	185109725	.	+	.	Name=Total_amino_acids;B73v2_pos=5:181379721;1allele=G/A;version=Hapmap2;RS=rs277906025;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	185129485	185129584	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:181399581;1allele=T/G;version=Hapmap2;RS=rs806364622;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	185312774	185312873	.	+	.	Name=Leaf_length;B73v2_pos=5:181585988;1allele=T/G;version=Hapmap1;RS=rs132253079;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	185316752	185316851	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:181589966;1allele=T/C;version=Hapmap2;RS=rs844207195;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	185691493	185691592	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:181972571;1allele=C/T;version=Hapmap2;RS=rs277906847;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	185750807	185750906	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:182037646;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	185797491	185797590	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:182088860;1allele=A/T;version=Hapmap2;RS=rs277907113;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	185901712	185901811	.	+	.	Name=Ear_row_number;B73v2_pos=5:182186288;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	185902016	185902115	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:182186592;1allele=G/T;version=Hapmap2;RS=rs277907404;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	185963198	185963297	.	+	.	Name=Ear_row_number;B73v2_pos=5:182247160;1allele=G/A;version=Hapmap2;RS=rs803797662;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	185965470	185965569	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:182249432;1allele=A/G;version=Hapmap2;RS=rs817464529;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	185965541	185965640	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:182249503;1allele=A/T;version=Hapmap2;RS=rs806897962;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	185968949	185969048	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:182252911;1allele=A/G;version=Hapmap2;RS=rs801831796;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	186020847	186020946	.	+	.	Name=Tassel_length;B73v2_pos=5:182295173;1allele=G/T;version=Hapmap2;RS=rs833851040;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	186235421	186235520	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:182515819;1allele=C/T;version=Hapmap2;RS=rs130157514;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	186422139	186422238	.	+	.	Name=Total_amino_acids;B73v2_pos=5:182698332;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	186496591	186496690	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:182773759;1allele=T/C;version=Hapmap2;RS=rs807572723;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	186899463	186899562	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:183142989;1allele=G/A;version=Hapmap2;RS=rs1062808600;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	186909093	186909192	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:183152619;1allele=C/T;version=Hapmap2;RS=rs130158719;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	187647985	187648084	.	+	.	Name=Nitrate;B73v2_pos=5:183833925;1allele=C/A;version=Hapmap2;RS=rs808396801;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	187672578	187672677	.	+	.	Name=Tassel_length;B73v2_pos=5:183858299;1allele=C/G;version=Hapmap2;RS=rs820206939;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	187770226	187770325	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:184054905;1allele=A/G;version=Hapmap2;RS=rs828932239;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	187859727	187859826	.	+	.	Name=Ear_height;B73v2_pos=5:184154628;1allele=G/A;version=Hapmap2;RS=rs808167425;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	187867942	187868041	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:184162618;1allele=G/A;version=Hapmap1;RS=rs132255023;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	187882551	187882650	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:184150595;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	187882959	187883058	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:184150187;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	187985496	187985595	.	+	.	Name=Sucrose;B73v2_pos=5:184263020;1allele=T/C;version=Hapmap2;RS=rs845421592;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	188160742	188160841	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:184432417;1allele=G/A;version=Hapmap1;RS=rs132255671;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	188214991	188215090	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:184477975;1allele=T/C;version=Hapmap2;RS=rs821148864;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	188428568	188428667	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:184727097;1allele=A/G;version=Hapmap2;RS=rs839170810;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	188474608	188474707	.	+	.	Name=Tassel_length;B73v2_pos=5:184773693;1allele=A/G;version=Hapmap2;RS=rs842544306;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	188908628	188908727	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:185226776;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	189092282	189092381	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:185407793;1allele=G/C;version=Hapmap2;RS=rs802946016;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	189163108	189163207	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:185479205;1allele=G/T;version=Hapmap2;RS=rs822756061;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	189178611	189178710	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:185494283;1allele=G/A;version=Hapmap2;RS=rs812749446;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	189179384	189179483	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:185495056;1allele=C/T;version=Hapmap2;RS=rs818368648;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	189181740	189181839	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:185497412;1allele=A/G;version=Hapmap2;RS=rs824665293;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	189182029	189182128	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:185497701;1allele=A/G;version=Hapmap2;RS=rs836079507;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	189229501	189229600	.	+	.	Name=Leaf_length;B73v2_pos=5:185536788;1allele=T/A;version=Hapmap2;RS=rs132256341;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	189229951	189230050	.	+	.	Name=Tassel_length;B73v2_pos=5:185537238;1allele=A/T;version=Hapmap2;RS=rs277911627;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	189386253	189386352	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:185689031;1allele=G/A;version=Hapmap2;RS=rs840795501;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	189836353	189836452	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:186117295;1allele=T/G;version=Hapmap2;RS=rs277912307;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	189859851	189859950	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:186140396;1allele=A/G;version=Hapmap2;RS=rs814887884;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	189983937	189984036	.	+	.	Name=Protein;B73v2_pos=5:186225359;1allele=C/T;version=Hapmap2;RS=rs846613885;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190003304	190003403	.	+	.	Name=Total_amino_acids;B73v2_pos=5:186244637;1allele=A/T;version=Hapmap2;RS=rs809113021;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	190029749	190029848	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:174158744;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190130950	190131049	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:186371485;1allele=T/C;version=Hapmap2;RS=rs802935699;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	190228927	190229026	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:186469169;1allele=/CA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190246156	190246255	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:186486354;1allele=G/A;version=Hapmap2;RS=rs829656760;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190253110	190253209	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:186493308;1allele=A/T;version=Hapmap2;RS=rs277912697;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	190254341	190254440	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:186494539;1allele=C/T;version=Hapmap2;RS=rs804748679;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190255004	190255103	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:186495202;1allele=G/A;version=Hapmap2;RS=rs803525632;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190256750	190256849	.	+	.	Name=Total_amino_acids;B73v2_pos=5:186496948;1allele=C/T;version=Hapmap1;RS=rs132257225;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190262257	190262356	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:186502455;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190267715	190267814	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:186507913;1allele=C/A;version=Hapmap2;RS=rs132257320;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	190443212	190443311	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:186679941;1allele=G/A;version=Hapmap2;RS=rs130162392;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190486198	190486297	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:186723108;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190490494	190490593	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:186727404;1allele=G/C;version=Hapmap2;RS=rs277912872;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	190538478	190538577	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:186771038;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190624223	190624322	.	+	.	Name=Protein;B73v2_pos=5:186848242;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190634227	190634326	.	+	.	Name=Protein;B73v2_pos=5:186838235;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190648314	190648413	.	+	.	Name=Cob_diameter;B73v2_pos=5:186824148;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	190756519	190756618	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195113008;1allele=C/G;version=Hapmap2;RS=rs130163003;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	190760556	190760655	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195117045;1allele=G/A;version=Hapmap2;RS=rs130163008;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190760556	190760655	.	+	.	Name=Plant_height;B73v2_pos=5:195117045;1allele=G/A;version=Hapmap2;RS=rs130163008;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190760556	190760655	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195117045;1allele=G/A;version=Hapmap2;RS=rs130163008;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190768597	190768696	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195125086;1allele=A/G;version=Hapmap2;RS=rs130163018;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190773734	190773833	.	+	.	Name=Plant_height;B73v2_pos=5:195130223;1allele=T/C;version=Hapmap2;RS=rs727029133;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	190773734	190773833	.	+	.	Name=Ear_height;B73v2_pos=5:195130223;1allele=T/C;version=Hapmap2;RS=rs727029133;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	190776968	190777067	.	+	.	Name=Ear_height;B73v2_pos=5:195133458;1allele=A/G;version=Hapmap2;RS=rs837282733;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190776969	190777068	.	+	.	Name=Plant_height;B73v2_pos=5:195133459;1allele=G/A;version=Hapmap2;RS=rs726117370;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190776969	190777068	.	+	.	Name=Ear_height;B73v2_pos=5:195133459;1allele=G/A;version=Hapmap2;RS=rs726117370;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190776969	190777068	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195133459;1allele=G/A;version=Hapmap2;RS=rs726117370;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190776981	190777080	.	+	.	Name=Ear_height;B73v2_pos=5:195133471;1allele=T/C;version=Hapmap2;RS=rs724712203;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	190776985	190777084	.	+	.	Name=Plant_height;B73v2_pos=5:195133475;1allele=C/T;version=Hapmap2;RS=rs822407724;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190776985	190777084	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:195133475;1allele=C/T;version=Hapmap2;RS=rs822407724;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190781323	190781422	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195138369;1allele=A/C;version=Hapmap2;RS=rs130163055;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	190823740	190823839	.	+	.	Name=Starch;B73v2_pos=5:195184644;1allele=A/T;version=Hapmap2;RS=rs277927301;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	190824031	190824130	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195184935;1allele=T/A;version=Hapmap2;RS=rs1063794481;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	190824187	190824286	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:195185091;1allele=G/A;version=Hapmap2;RS=rs804360967;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	190824680	190824779	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:195185584;1allele=T/C;version=Hapmap2;RS=rs277927318;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190824680	190824779	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195185584;1allele=T/C;version=Hapmap2;RS=rs277927318;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190826567	190826666	.	+	.	Name=Plant_height;B73v2_pos=5:195187471;1allele=G/A;version=Hapmap2;RS=rs725571927;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190826567	190826666	.	+	.	Name=Starch;B73v2_pos=5:195187471;1allele=G/A;version=Hapmap2;RS=rs725571927;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190826567	190826666	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195187471;1allele=G/A;version=Hapmap2;RS=rs725571927;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190826746	190826845	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195187650;1allele=G/T;version=Hapmap2;RS=rs277927334;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	190828258	190828357	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195189162;1allele=C/G;version=Hapmap2;RS=rs277927343;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	190844679	190844778	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:195205583;1allele=A/G;version=Hapmap2;RS=rs839069548;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190847319	190847418	.	+	.	Name=Plant_height;B73v2_pos=5:195208223;1allele=A/T;version=Hapmap2;RS=rs839512289;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	190847319	190847418	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195208223;1allele=A/T;version=Hapmap2;RS=rs839512289;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	190848257	190848356	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:195209161;1allele=C/T;version=Hapmap2;RS=rs831080241;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190884184	190884283	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:195245736;1allele=A/G;version=Hapmap2;RS=rs825982090;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190910136	190910235	.	+	.	Name=Days_to_silk;B73v2_pos=5:195271691;1allele=C/T;version=Hapmap2;RS=rs801665642;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190911811	190911910	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195273366;1allele=A/G;version=Hapmap1;RS=rs132258094;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	190914175	190914274	.	+	.	Name=Plant_height;B73v2_pos=5:195275730;1allele=C/T;version=Hapmap2;RS=rs835211846;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	190988156	190988255	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:186939981;1allele=C/A;version=Hapmap2;RS=rs130163372;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	190990600	190990699	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:186942425;1allele=C/T;version=Hapmap2;RS=rs130163398;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	191010274	191010373	.	+	.	Name=Sucrose;B73v2_pos=5:186961466;1allele=A/G;version=Hapmap2;RS=rs132258204;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191015589	191015688	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:186966781;1allele=G/A;version=Hapmap2;RS=rs130163501;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	191015589	191015688	.	+	.	Name=Ear_height;B73v2_pos=5:186966781;1allele=G/A;version=Hapmap2;RS=rs130163501;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	191015660	191015759	.	+	.	Name=Plant_height;B73v2_pos=5:186966852;1allele=C/A;version=Hapmap2;RS=rs132258245;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	191015660	191015759	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:186966852;1allele=C/A;version=Hapmap2;RS=rs132258245;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	191017073	191017172	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:186968266;1allele=T/C;version=Hapmap1;RS=rs130163513;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	191019252	191019351	.	+	.	Name=Ear_height;B73v2_pos=5:186970445;1allele=T/A;version=Hapmap2;RS=rs811397591;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	191070620	191070719	.	+	.	Name=Plant_height;B73v2_pos=5:187021814;1allele=T/C;version=Hapmap2;RS=rs817483588;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	191070620	191070719	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:187021814;1allele=T/C;version=Hapmap2;RS=rs817483588;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	191078477	191078576	.	+	.	Name=Ear_height;B73v2_pos=5:187029671;1allele=A/C;version=Hapmap2;RS=rs815535454;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	191093734	191093833	.	+	.	Name=Plant_height;B73v2_pos=5:187044698;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	191093734	191093833	.	+	.	Name=Ear_height;B73v2_pos=5:187044698;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	191190684	191190783	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:187107407;1allele=A/G;version=Hapmap2;RS=rs130163784;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	191376401	191376500	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:187304764;1allele=G/A;version=Hapmap2;RS=rs806956997;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191418160	191418259	.	+	.	Name=Days_to_silk;B73v2_pos=5:187360499;1allele=G/A;version=Hapmap2;RS=rs801476876;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191711767	191711866	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:187661445;1allele=G/A;version=Hapmap2;RS=rs130164483;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	191717263	191717362	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:187666943;1allele=A/G;version=Hapmap2;RS=rs130164511;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191729672	191729771	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:187679452;1allele=G/A;version=Hapmap2;RS=rs821872367;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191731172	191731271	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:187680952;1allele=A/G;version=Hapmap2;RS=rs130164578;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191745694	191745793	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:187694836;1allele=G/A;version=Hapmap2;RS=rs809629486;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191786188	191786287	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:187736129;1allele=G/A;version=Hapmap2;RS=rs1060935374;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	191884395	191884494	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:187834399;1allele=C/T;version=Hapmap2;RS=rs130164852;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	191885748	191885846	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:187835752;1allele=G/T;version=Hapmap1;RS=rs132258713;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191891328	191891427	.	+	.	Name=Days_to_silk;B73v2_pos=5:187841333;1allele=A/G;version=Hapmap2;RS=rs1061829565;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	191900792	191900891	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:187850798;1allele=G/A;version=Hapmap2;RS=rs820279100;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	191905901	191906000	.	+	.	Name=Plant_height;B73v2_pos=5:187855907;1allele=C/T;version=Hapmap2;RS=rs130164912;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	191908589	191908688	.	+	.	Name=Total_amino_acids;B73v2_pos=5:187858595;1allele=A/G;version=Hapmap2;RS=rs829612300;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	192513161	192513260	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:188453843;1allele=C/T;version=Hapmap2;RS=rs277914271;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	192513161	192513260	.	+	.	Name=Ear_height;B73v2_pos=5:188453843;1allele=C/T;version=Hapmap2;RS=rs277914271;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	192515947	192516046	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:188456629;1allele=G/T;version=Hapmap2;RS=rs132258968;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	192521869	192521968	.	+	.	Name=Plant_height;B73v2_pos=5:188462550;1allele=A/G;version=Hapmap2;RS=rs277914306;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	192537027	192537126	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:188477708;1allele=T/C;version=Hapmap2;RS=rs726442425;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	192538365	192538464	.	+	.	Name=Plant_height;B73v2_pos=5:188479046;1allele=T/G;version=Hapmap2;RS=rs130165552;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	192547778	192547877	.	+	.	Name=Tassel_length;B73v2_pos=5:188488459;1allele=T/A;version=Hapmap2;RS=rs831672953;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	192552801	192552900	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:188493482;1allele=G/A;version=Hapmap2;RS=rs835751046;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	192693481	192693580	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:188653829;1allele=A/G;version=Hapmap2;RS=rs836237505;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	192693481	192693580	.	+	.	Name=Plant_height;B73v2_pos=5:188653829;1allele=A/G;version=Hapmap2;RS=rs836237505;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	192693481	192693580	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:188653829;1allele=A/G;version=Hapmap2;RS=rs836237505;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	192693481	192693580	.	+	.	Name=Ear_height;B73v2_pos=5:188653829;1allele=A/G;version=Hapmap2;RS=rs836237505;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	192697658	192697757	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:188658006;1allele=T/A;version=Hapmap2;RS=rs819645727;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	192712493	192712592	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:188672841;1allele=T/C;version=Hapmap1;RS=rs132259424;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	192748104	192748203	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:188708181;1allele=/GTC;version=Hapmap1;RS=rs843378061;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	192874059	192874158	.	+	.	Name=Plant_height;B73v2_pos=5:188831303;1allele=C/T;version=Hapmap2;RS=rs132259963;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	192874951	192875050	.	+	.	Name=Ear_height;B73v2_pos=5:188832195;1allele=T/G;version=Hapmap2;RS=rs849749986;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	192874951	192875050	.	+	.	Name=Plant_height;B73v2_pos=5:188832195;1allele=T/G;version=Hapmap2;RS=rs849749986;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	192875570	192875669	.	+	.	Name=Ear_height;B73v2_pos=5:188832814;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	192876222	192876321	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:188833466;1allele=C/T;version=Hapmap1;RS=rs132260032;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	192876707	192876806	.	+	.	Name=Plant_height;B73v2_pos=5:188833951;1allele=G/T;version=Hapmap2;RS=rs817669627;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	192876716	192876815	.	+	.	Name=Plant_height;B73v2_pos=5:188833960;1allele=C/T;version=Hapmap2;RS=rs277915188;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	192877134	192877233	.	+	.	Name=Plant_height;B73v2_pos=5:188834378;1allele=C/A;version=Hapmap2;RS=rs277915199;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	192891961	192892060	.	+	.	Name=Plant_height;B73v2_pos=5:188849205;1allele=C/A;version=Hapmap2;RS=rs822593911;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	192900491	192900590	.	+	.	Name=Plant_height;B73v2_pos=5:188857735;1allele=T/G;version=Hapmap1;RS=rs132260169;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	192958376	192958475	.	+	.	Name=Protein;B73v2_pos=5:188915626;1allele=T/C;version=Hapmap2;RS=rs277915477;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	192959009	192959108	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:188916259;1allele=C/G;version=Hapmap2;RS=rs277915481;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	192962132	192962231	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:188919371;1allele=G/C;version=Hapmap2;RS=rs132260273;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	192963171	192963270	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:188920410;1allele=/ATGCAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193036478	193036577	.	+	.	Name=Stalk_strength;B73v2_pos=5:188994119;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193066401	193066500	.	+	.	Name=Total_amino_acids;B73v2_pos=5:189024052;1allele=C/T;version=Hapmap2;RS=rs817999017;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	193090985	193091084	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:189049951;1allele=C/T;version=Hapmap2;RS=rs277915663;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	193090987	193091086	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:189049953;1allele=C/T;version=Hapmap2;RS=rs277915664;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	193091168	193091267	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189050134;1allele=T/G;version=Hapmap2;RS=rs277915666;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	193131490	193131589	.	+	.	Name=Tassel_length;B73v2_pos=5:189104107;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193238634	193238733	.	+	.	Name=Ear_height;B73v2_pos=5:189179246;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193296424	193296523	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:189219594;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193313887	193313986	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:189202131;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193313933	193314032	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:189202085;1allele=T/A;version=Hapmap2;RS=rs841289708;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	193350039	193350138	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189290448;1allele=C/G;version=Hapmap2;RS=rs277916023;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	193350209	193350308	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189290618;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193356226	193356325	.	+	.	Name=Days_to_silk;B73v2_pos=5:189297077;1allele=A/G;version=Hapmap2;RS=rs277916034;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	193380217	193380316	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:189321000;1allele=A/C;version=Hapmap2;RS=rs130166308;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	193384750	193384849	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:189325533;1allele=A/T;version=Hapmap2;RS=rs130166326;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	193426199	193426298	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:189368195;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193439165	193439264	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:189381162;1allele=T/C;version=Hapmap2;RS=rs815197960;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	193440510	193440609	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:189382507;1allele=C/T;version=Hapmap2;RS=rs833456226;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	193448562	193448661	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:189390556;1allele=G/A;version=Hapmap2;RS=rs1062399299;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	193450211	193450310	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:189392205;1allele=A/C;version=Hapmap2;RS=rs725664463;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	193451726	193451825	.	+	.	Name=Protein;B73v2_pos=5:189393721;1allele=C/T;version=Hapmap1;RS=rs130166440;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	193452831	193452930	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:189394830;1allele=G/A;version=Hapmap2;RS=rs725702747;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	193455276	193455375	.	+	.	Name=Protein;B73v2_pos=5:189397276;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193456100	193456199	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:189398100;1allele=C/A;version=Hapmap2;RS=rs833700314;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	193514887	193514986	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:189456889;1allele=T/G;version=Hapmap2;RS=rs132260757;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	193515869	193515968	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:189457871;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193515914	193516013	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:189457916;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193540354	193540453	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189482372;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193593341	193593440	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:189534940;1allele=G/A;version=Hapmap2;RS=rs825424249;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	193685461	193685560	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189622804;1allele=/GACG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193685505	193685604	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189622760;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193685513	193685612	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:189622752;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193685745	193685844	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:189622520;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193685983	193686082	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189622282;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	193896712	193896811	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:189806069;1allele=G/A;version=Hapmap2;RS=rs132260991;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	193897594	193897693	.	+	.	Name=Plant_height;B73v2_pos=5:189806951;1allele=A/G;version=Hapmap2;RS=rs726827465;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	193906942	193907041	.	+	.	Name=Plant_height;B73v2_pos=5:189816299;1allele=A/G;version=Hapmap2;RS=rs807551132;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	193909068	193909167	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:189818425;1allele=C/T;version=Hapmap2;RS=rs825033454;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	193985315	193985414	.	+	.	Name=Protein;B73v2_pos=5:189889558;1allele=G/A;version=Hapmap2;RS=rs130166961;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	194008258	194008357	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:189912502;1allele=T/C;version=Hapmap2;RS=rs130167000;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	194080283	194080382	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:189975202;1allele=G/A;version=Hapmap2;RS=rs814858888;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	194082149	194082248	.	+	.	Name=Total_amino_acids;B73v2_pos=5:189977068;1allele=G/A;version=Hapmap2;RS=rs837240702;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	194149679	194149778	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:190031444;1allele=C/A;version=Hapmap2;RS=rs130167071;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	194158968	194159067	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:190040733;1allele=G/T;version=Hapmap1;RS=rs820296246;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	194169548	194169647	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:190051313;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	194203066	194203165	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:190084834;1allele=G/A;version=Hapmap2;RS=rs847345105;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	194263741	194263840	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:190145420;1allele=G/A;version=Hapmap2;RS=rs727093905;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	194287413	194287512	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:190159366;1allele=G/A;version=Hapmap2;RS=rs848822151;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	194364843	194364942	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:190233222;1allele=G/A;version=Hapmap1;RS=rs132261518;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	194365777	194365876	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:190234157;1allele=C/A;version=Hapmap2;RS=rs833817315;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	194368080	194368179	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:190236460;1allele=C/G;version=Hapmap1;RS=rs132261548;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	194368136	194368235	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:190236516;1allele=C/T;version=Hapmap1;RS=rs836694283;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	194372187	194372286	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:190240567;1allele=C/G;version=Hapmap2;RS=rs277918312;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	194372187	194372286	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:190240567;1allele=C/G;version=Hapmap2;RS=rs277918312;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	194814584	194814683	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:190675983;1allele=C/G;version=Hapmap1;RS=rs132262040;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	194818876	194818975	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:190680272;1allele=A/C;version=Hapmap2;RS=rs815306635;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	194826743	194826842	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:190688139;1allele=C/T;version=Hapmap1;RS=rs726307305;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	194826982	194827081	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:190688378;1allele=-/+;version=Hapmap2;RS=rs814417508;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	194860908	194861007	.	+	.	Name=Plant_height;B73v2_pos=5:195418551;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	194885180	194885279	.	+	.	Name=Starch;B73v2_pos=5:195406367;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	194919176	194919275	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:195371575;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	194960068	194960167	.	+	.	Name=Nitrate;B73v2_pos=5:195334602;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	194993363	194993462	.	+	.	Name=Starch;B73v2_pos=5:195303996;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195000720	195000819	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:195291683;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195040313	195040412	.	+	.	Name=Nitrate;B73v2_pos=5:190708255;1allele=C/T;version=Hapmap2;RS=rs837907442;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	195066513	195066612	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:190734197;1allele=G/T;version=Hapmap2;RS=rs277918740;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	195074334	195074433	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:190742570;1allele=C/T;version=Hapmap2;RS=rs132262372;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	195090269	195090368	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:190852056;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195272174	195272273	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:190935760;1allele=C/T;version=Hapmap2;RS=rs818556941;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	195296250	195296349	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:190959836;1allele=C/G;version=Hapmap2;RS=rs132262634;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	195309381	195309480	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:190972969;1allele=C/T;version=Hapmap1;RS=rs132262646;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	195355703	195355802	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:191019294;1allele=A/G;version=Hapmap2;RS=rs818722614;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	195393336	195393435	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:191056937;1allele=T/C;version=Hapmap2;RS=rs837070532;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	195450418	195450517	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:191111878;1allele=A/C;version=Hapmap2;RS=rs846785993;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	195465991	195466090	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:191127451;1allele=T/C;version=Hapmap2;RS=rs277919275;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	195467205	195467304	.	+	.	Name=Glutamate;B73v2_pos=5:191128665;1allele=C/T;version=Hapmap2;RS=rs132262849;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	195476468	195476567	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:191137929;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195550687	195550786	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:191217785;1allele=A/G;version=Hapmap2;RS=rs130168551;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	195551203	195551302	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:191218301;1allele=G/C;version=Hapmap2;RS=rs130168555;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	195627071	195627170	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:191284772;1allele=A/G;version=Hapmap2;RS=rs826378771;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	195668032	195668131	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:191334916;1allele=G/A;version=Hapmap2;RS=rs834486552;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	195709500	195709599	.	+	.	Name=Malate;B73v2_pos=5:191372719;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195716587	195716686	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:191365632;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195722192	195722291	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:191360027;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195802949	195803048	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:191469281;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195803286	195803383	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:191469617;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	195804302	195804401	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:191470635;1allele=C/T;version=Hapmap2;RS=rs806041594;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	196192297	196192396	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:191859897;1allele=T/C;version=Hapmap2;RS=rs277920397;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	196192416	196192515	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:191860016;1allele=A/G;version=Hapmap2;RS=rs277920401;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	196215242	196215341	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:191882921;1allele=T/C;version=Hapmap1;RS=rs132263953;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	196215242	196215341	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:191882921;1allele=T/C;version=Hapmap1;RS=rs132263953;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	196218595	196218694	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:191886275;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196230851	196230950	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:191898532;1allele=/ACACAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196237138	196237237	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:191904819;1allele=G/A;version=Hapmap2;RS=rs811034705;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	196249907	196250006	.	+	.	Name=Nitrate;B73v2_pos=5:191917590;1allele=G/A;version=Hapmap2;RS=rs834338254;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	196294956	196295055	.	+	.	Name=Nitrate;B73v2_pos=5:191962241;1allele=C/T;version=Hapmap2;RS=rs824657154;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	196318175	196318274	.	+	.	Name=Days_to_silk;B73v2_pos=5:191985461;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196420894	196420993	.	+	.	Name=Nitrate;B73v2_pos=5:192088191;1allele=T/A;version=Hapmap2;RS=rs807169137;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	196448820	196448919	.	+	.	Name=Nitrate;B73v2_pos=5:192116117;1allele=G/A;version=Hapmap2;RS=rs811119914;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	196484443	196484542	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:192152039;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196493507	196493606	.	+	.	Name=Ear_height;B73v2_pos=5:192161103;1allele=T/G;version=Hapmap1;RS=rs130169397;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	196493680	196493779	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:192161276;1allele=T/C;version=Hapmap2;RS=rs822926873;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	196501195	196501294	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:192167120;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196552829	196552928	.	+	.	Name=Starch;B73v2_pos=5:192211718;1allele=T/C;version=Hapmap2;RS=rs130169453;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	196552890	196552989	.	+	.	Name=Starch;B73v2_pos=5:192211779;1allele=G/C;version=Hapmap2;RS=rs810591688;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	196552897	196552996	.	+	.	Name=Starch;B73v2_pos=5:192211786;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196552994	196553093	.	+	.	Name=Starch;B73v2_pos=5:192211883;1allele=A/G;version=Hapmap1;RS=rs132264583;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	196602220	196602319	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:192252759;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196602788	196602887	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:192253327;1allele=T/C;version=Hapmap2;RS=rs832240247;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	196607147	196607246	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:192257686;1allele=T/A;version=Hapmap2;RS=rs834704294;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	196607217	196607316	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:192257756;1allele=G/A;version=Hapmap2;RS=rs820097626;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	196609171	196609270	.	+	.	Name=Days_to_silk;B73v2_pos=5:192259710;1allele=C/T;version=Hapmap2;RS=rs819414350;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	196687040	196687139	.	+	.	Name=Days_to_silk;B73v2_pos=5:192306529;1allele=C/T;version=Hapmap2;RS=rs814131374;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	196779297	196779396	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:192434086;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	196904461	196904560	.	+	.	Name=Nitrate;B73v2_pos=5:192560514;1allele=G/A;version=Hapmap2;RS=rs277921851;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	197004350	197004449	.	+	.	Name=Starch;B73v2_pos=5:192632376;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197043744	197043843	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:192699385;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197065906	197066005	.	+	.	Name=Plant_height;B73v2_pos=5:192721409;1allele=T/A;version=Hapmap2;RS=rs802446184;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	197065906	197066005	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:192721409;1allele=T/A;version=Hapmap2;RS=rs802446184;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	197100414	197100513	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:192761929;1allele=C/T;version=Hapmap2;RS=rs814405680;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	197302758	197302857	.	+	.	Name=Nitrate;B73v2_pos=5:193016085;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197311344	197311443	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:193015697;1allele=A/G;version=Hapmap1;RS=rs843102749;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	197323315	197323414	.	+	.	Name=Nitrate;B73v2_pos=5:193003865;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197398004	197398103	.	+	.	Name=Nitrate;B73v2_pos=5:192928525;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197448431	197448530	.	+	.	Name=Nitrate;B73v2_pos=5:193081336;1allele=C/A;version=Hapmap2;RS=rs831236285;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	197815502	197815601	.	+	.	Name=Nitrate;B73v2_pos=5:193426962;1allele=G/A;version=Hapmap2;RS=rs277924507;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	197837175	197837274	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:193447308;1allele=G/T;version=Hapmap2;RS=rs277924738;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	197837733	197837832	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:193447866;1allele=G/A;version=Hapmap2;RS=rs830393194;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	197843158	197843257	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193453291;1allele=G/C;version=Hapmap2;RS=rs132265470;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	197843329	197843428	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:193453462;1allele=G/A;version=Hapmap2;RS=rs130170258;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	197881483	197881582	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:193518089;1allele=A/G;version=Hapmap2;RS=rs130170526;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	197881943	197882040	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193518549;1allele=C/T;version=Hapmap2;RS=rs1062611736;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	197887827	197887926	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:193524100;1allele=C/T;version=Hapmap2;RS=rs808379447;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	197893345	197893444	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193529619;1allele=A/G;version=Hapmap2;RS=rs130170658;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	197896007	197896106	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:193532281;1allele=T/C;version=Hapmap2;RS=rs817269918;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	197899020	197899119	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:193535294;1allele=C/T;version=Hapmap2;RS=rs845050988;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	197900396	197900495	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:193536669;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197902042	197902141	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:193538315;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197902672	197902771	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193538945;1allele=C/A;version=Hapmap2;RS=rs132265819;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	197911175	197911274	.	+	.	Name=Nitrate;B73v2_pos=5:193547448;1allele=T/A;version=Hapmap2;RS=rs841685043;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	197919530	197919629	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193555802;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197919530	197919629	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:193555802;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197972333	197972432	.	+	.	Name=Nitrate;B73v2_pos=5:193620906;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	197974521	197974620	.	+	.	Name=Nitrate;B73v2_pos=5:193598160;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198004924	198005023	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:193616766;1allele=T/C;version=Hapmap2;RS=rs803247352;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	198013966	198014065	.	+	.	Name=Nitrate;B73v2_pos=5:193646636;1allele=T/A;version=Hapmap2;RS=rs803613532;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	198017112	198017211	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:193649782;1allele=T/C;version=Hapmap2;RS=rs132265961;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	198017233	198017332	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:193649903;1allele=A/G;version=Hapmap2;RS=rs801629479;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	198018061	198018160	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:193650731;1allele=C/A;version=Hapmap1;RS=rs130170757;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	198098950	198099049	.	+	.	Name=Nitrate;B73v2_pos=5:193724101;1allele=C/A;version=Hapmap2;RS=rs1064414336;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	198100621	198100720	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193725772;1allele=T/C;version=Hapmap2;RS=rs833252410;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	198106752	198106851	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:193731903;1allele=C/T;version=Hapmap2;RS=rs132266095;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	198112737	198112836	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193737888;1allele=C/T;version=Hapmap2;RS=rs277925529;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	198123365	198123464	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193771057;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198206293	198206392	.	+	.	Name=Nitrate;B73v2_pos=5:193822538;1allele=C/G;version=Hapmap2;RS=rs814745543;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	198208881	198208980	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193825126;1allele=A/G;version=Hapmap2;RS=rs130170922;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	198232723	198232822	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:193849087;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198317765	198317864	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:193931326;1allele=A/T;version=Hapmap2;RS=rs803702445;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	198326914	198327013	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:193940475;1allele=A/G;version=Hapmap2;RS=rs849218316;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	198341540	198341639	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:193954791;1allele=C/T;version=Hapmap1;RS=rs132266418;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	198353691	198353790	.	+	.	Name=Starch;B73v2_pos=5:193966943;1allele=GG/;version=Hapmap1;RS=rs842251598;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	198353918	198354017	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:193967170;1allele=C/G;version=Hapmap1;RS=rs132266460;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	198436193	198436292	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:194047489;1allele=A/T;version=Hapmap2;RS=rs803551090;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	198436199	198436298	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:194047495;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198446396	198446495	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:194057692;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198479300	198479399	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:194090892;1allele=C/G;version=Hapmap1;RS=rs132266577;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	198482098	198482197	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:194093690;1allele=T/C;version=Hapmap2;RS=rs130171247;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	198502561	198502660	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:194114154;1allele=T/G;version=Hapmap1;RS=rs132266687;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	198502583	198502682	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:194114176;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198507098	198507197	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:194118691;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198509075	198509174	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:194120668;1allele=G/T;version=Hapmap2;RS=rs806211740;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	198510067	198510166	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:194121660;1allele=C/G;version=Hapmap1;RS=rs132266777;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	198510549	198510648	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:194122142;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198562595	198562694	.	+	.	Name=Plant_height;B73v2_pos=5:194240373;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198576340	198576439	.	+	.	Name=Days_to_silk;B73v2_pos=5:194163508;1allele=A/G;version=Hapmap1;RS=rs132266815;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	198577386	198577485	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:194164554;1allele=T/C;version=Hapmap2;RS=rs802358347;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	198581330	198581429	.	+	.	Name=Days_to_silk;B73v2_pos=5:194168494;1allele=A/G;version=Hapmap2;RS=rs840768161;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	198590317	198590416	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:194177486;1allele=A/T;version=Hapmap2;RS=rs130171400;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	198610508	198610607	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:194197675;1allele=A/T;version=Hapmap2;RS=rs1063239776;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	198610752	198610851	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:194197919;1allele=A/T;version=Hapmap2;RS=rs840798789;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	198612294	198612393	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:194199462;1allele=G/T;version=Hapmap2;RS=rs804418817;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	198620742	198620841	.	+	.	Name=Cob_diameter;B73v2_pos=5:194207916;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	198621538	198621637	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:194208712;1allele=T/G;version=Hapmap2;RS=rs835997630;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	198648622	198648721	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:194253752;1allele=G/C;version=Hapmap2;RS=rs130171725;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	198648622	198648721	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:194253752;1allele=G/C;version=Hapmap2;RS=rs130171725;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	198695825	198695924	.	+	.	Name=Nitrate;B73v2_pos=5:194311442;1allele=A/C;version=Hapmap2;RS=rs827319089;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	198726792	198726891	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:194342413;1allele=T/A;version=Hapmap2;RS=rs807337456;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	198840583	198840682	.	+	.	Name=Height_above_ear;B73v2_pos=5:194557144;1allele=C/G;version=Hapmap2;RS=rs277926337;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	198843858	198843957	.	+	.	Name=Protein;B73v2_pos=5:194560419;1allele=T/G;version=Hapmap1;RS=rs130171955;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	198847359	198847458	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:194563920;1allele=T/C;version=Hapmap2;RS=rs826407882;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	198866350	198866449	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:194582911;1allele=G/C;version=Hapmap2;RS=rs832790294;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	198935646	198935745	.	+	.	Name=Protein;B73v2_pos=5:194647570;1allele=C/G;version=Hapmap1;RS=rs132267260;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	198942734	198942833	.	+	.	Name=Protein;B73v2_pos=5:194654655;1allele=A/G;version=Hapmap2;RS=rs277926577;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	198942896	198942995	.	+	.	Name=Nitrate;B73v2_pos=5:194654817;1allele=G/A;version=Hapmap2;RS=rs132267277;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	198995862	198995961	.	+	.	Name=Cob_diameter;B73v2_pos=5:194689917;1allele=C/A;version=Hapmap2;RS=rs818615112;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	199034000	199034099	.	+	.	Name=Nitrate;B73v2_pos=5:194732145;1allele=G/A;version=Hapmap2;RS=rs827640358;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	199142926	199143025	.	+	.	Name=Plant_height;B73v2_pos=5:194870057;1allele=A/C;version=Hapmap2;RS=rs820207862;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	199245055	199245154	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:194972572;1allele=A/G;version=Hapmap2;RS=rs130172563;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	199270218	199270317	.	+	.	Name=Plant_height;B73v2_pos=5:194997732;1allele=C/T;version=Hapmap2;RS=rs813244095;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	199281365	199281464	.	+	.	Name=Nitrate;B73v2_pos=5:195008879;1allele=A/G;version=Hapmap2;RS=rs818567177;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	203353744	203353843	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195518505;1allele=A/C;version=Hapmap2;RS=rs836567716;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	203374660	203374759	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:195485006;1allele=A/C;version=Hapmap2;RS=rs130172691;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	203414877	203414976	.	+	.	Name=Plant_height;B73v2_pos=5:195454750;1allele=A/G;version=Hapmap2;RS=rs1063852510;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	203425432	203425531	.	+	.	Name=Plant_height;B73v2_pos=5:195444195;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	203425432	203425531	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195444195;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	203509428	203509527	.	+	.	Name=Plant_height;B73v2_pos=5:195599572;1allele=C/A;version=Hapmap2;RS=rs835460360;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	203569244	203569343	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:195659359;1allele=G/A;version=Hapmap2;RS=rs846120914;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	203571934	203572033	.	+	.	Name=Height_above_ear;B73v2_pos=5:195662049;1allele=G/C;version=Hapmap1;RS=rs132267953;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	203587709	203587808	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:195677819;1allele=GCC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	203590135	203590234	.	+	.	Name=Days_to_silk;B73v2_pos=5:195680245;1allele=A/G;version=Hapmap2;RS=rs803483946;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	203619413	203619512	.	+	.	Name=Plant_height;B73v2_pos=5:195717064;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	203738401	203738500	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195834659;1allele=C/G;version=Hapmap1;RS=rs132268151;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	203739200	203739299	.	+	.	Name=Plant_height;B73v2_pos=5:195835458;1allele=A/T;version=Hapmap2;RS=rs846851396;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	203740074	203740173	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195836333;1allele=A/G;version=Hapmap2;RS=rs132268161;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	203748805	203748904	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:195845065;1allele=G/A;version=Hapmap2;RS=rs840016112;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	203749263	203749362	.	+	.	Name=Plant_height;B73v2_pos=5:195856540;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	203766831	203766930	.	+	.	Name=Height_above_ear;B73v2_pos=5:195863484;1allele=T/C;version=Hapmap2;RS=rs807215882;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	203768577	203768676	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195865230;1allele=G/A;version=Hapmap2;RS=rs816290999;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	203781883	203781982	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:195878536;1allele=T/C;version=Hapmap2;RS=rs849863169;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	203790696	203790795	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195887349;1allele=C/T;version=Hapmap2;RS=rs1060570029;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	203822551	203822650	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:195920500;1allele=A/G;version=Hapmap2;RS=rs804409753;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	203840577	203840676	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:195935398;1allele=T/C;version=Hapmap2;RS=rs130173166;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	203842355	203842454	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195937176;1allele=C/T;version=Hapmap2;RS=rs277928155;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	203842355	203842454	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195937176;1allele=C/T;version=Hapmap2;RS=rs277928155;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	203871925	203872024	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:195966748;1allele=G/A;version=Hapmap2;RS=rs277928183;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	203873019	203873118	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:195967842;1allele=C/T;version=Hapmap2;RS=rs130173195;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	203922982	203923081	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:196017056;1allele=G/C;version=Hapmap2;RS=rs130173248;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	203934328	203934427	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:196028401;1allele=T/G;version=Hapmap2;RS=rs277928308;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	203934620	203934719	.	+	.	Name=Leaf_length;B73v2_pos=5:196028693;1allele=T/A;version=Hapmap2;RS=rs841354949;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	204029972	204030071	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:196110296;1allele=C/A;version=Hapmap2;RS=rs814844045;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	204040139	204040238	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:196141083;1allele=C/T;version=Hapmap2;RS=rs810227966;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	204040241	204040340	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:196141185;1allele=T/C;version=Hapmap2;RS=rs804327434;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	204077177	204077276	.	+	.	Name=Days_to_silk;B73v2_pos=5:196178041;1allele=T/A;version=Hapmap2;RS=rs726286467;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	204078283	204078382	.	+	.	Name=Sucrose;B73v2_pos=5:196179147;1allele=G/A;version=Hapmap2;RS=rs277928487;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	204078851	204078950	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196179715;1allele=G/T;version=Hapmap2;RS=rs825722575;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	204079408	204079507	.	+	.	Name=Sucrose;B73v2_pos=5:196180272;1allele=A/G;version=Hapmap2;RS=rs821688799;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	204148549	204148648	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:196252645;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	204152323	204152422	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:196256419;1allele=T/C;version=Hapmap2;RS=rs837156011;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	204155297	204155396	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:196259393;1allele=G/A;version=Hapmap2;RS=rs829723037;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	204211890	204211988	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:196319818;1allele=C/T;version=Hapmap2;RS=rs823541562;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	204249900	204249999	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:196357835;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	204249900	204249999	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:196357835;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	204274649	204274748	.	+	.	Name=Height_above_ear;B73v2_pos=5:196382745;1allele=A/G;version=Hapmap2;RS=rs130173814;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	204305728	204305827	.	+	.	Name=Days_to_silk;B73v2_pos=5:196413824;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	204378610	204378709	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:196477877;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	204412596	204412695	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196511864;1allele=C/T;version=Hapmap2;RS=rs277928918;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	204412966	204413065	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196512234;1allele=T/C;version=Hapmap2;RS=rs1064787069;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	204444854	204444953	.	+	.	Name=Days_to_silk;B73v2_pos=5:196544187;1allele=C/T;version=Hapmap2;RS=rs823610614;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	204446922	204447021	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196546255;1allele=G/A;version=Hapmap1;RS=rs132268935;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	204448423	204448522	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:196547756;1allele=C/A;version=Hapmap2;RS=rs806273189;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	204519989	204520088	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196622117;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	204577604	204577703	.	+	.	Name=Cob_diameter;B73v2_pos=5:196670728;1allele=G/C;version=Hapmap2;RS=rs844967827;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	204579156	204579255	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196672280;1allele=G/T;version=Hapmap2;RS=rs132269158;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	204581265	204581364	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196674389;1allele=+/-;version=Hapmap2;RS=rs818340598;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	204581823	204581922	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196674947;1allele=G/A;version=Hapmap2;RS=rs130174081;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	204585023	204585122	.	+	.	Name=Tassel_length;B73v2_pos=5:196678147;1allele=G/T;version=Hapmap2;RS=rs823615603;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	204625044	204625143	.	+	.	Name=Tassel_length;B73v2_pos=5:196718170;1allele=T/C;version=Hapmap2;RS=rs277929185;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	204633294	204633393	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:196726489;1allele=CTG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	204636892	204636991	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:196730087;1allele=G/C;version=Hapmap2;RS=rs130174166;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	204637595	204637694	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:196730791;1allele=T/C;version=Hapmap2;RS=rs277929238;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	204665692	204665791	.	+	.	Name=Leaf_width;B73v2_pos=5:196759940;1allele=T/A;version=Hapmap2;RS=rs811512970;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	204703171	204703270	.	+	.	Name=Leaf_width;B73v2_pos=5:196797431;1allele=G/A;version=Hapmap2;RS=rs277929443;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	204998327	204998426	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:197024043;1allele=T/G;version=Hapmap2;RS=rs845072032;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	205000549	205000648	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:197026265;1allele=C/T;version=Hapmap2;RS=rs130174790;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	205002133	205002232	.	+	.	Name=Tassel_length;B73v2_pos=5:197027848;1allele=G/A;version=Hapmap2;RS=rs835240274;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	205060962	205061061	.	+	.	Name=Days_to_silk;B73v2_pos=5:197275972;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205269266	205269365	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:197341623;1allele=G/A;version=Hapmap2;RS=rs850380783;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	205379883	205379982	.	+	.	Name=Days_to_silk;B73v2_pos=5:197450064;1allele=C/T;version=Hapmap2;RS=rs804448086;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	205540225	205540324	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:197609796;1allele=G/T;version=Hapmap2;RS=rs839057827;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	205600330	205600429	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:197675211;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205615117	205615216	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:197689998;1allele=G/A;version=Hapmap2;RS=rs838864132;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	205637670	205637769	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:197712552;1allele=A/C;version=Hapmap2;RS=rs850288049;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	205715524	205715623	.	+	.	Name=Tassel_length;B73v2_pos=5:197790550;1allele=C/G;version=Hapmap2;RS=rs277930798;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	205720686	205720785	.	+	.	Name=Plant_height;B73v2_pos=5:197795714;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205816612	205816711	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:197891506;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205873490	205873589	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:197948387;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205874666	205874765	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:197949563;1allele=A/G;version=Hapmap2;RS=rs849751051;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	205909943	205910042	.	+	.	Name=Ear_height;B73v2_pos=5:197984770;1allele=G/A;version=Hapmap2;RS=rs808264075;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	205909943	205910042	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:197984770;1allele=G/A;version=Hapmap2;RS=rs808264075;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	205949705	205949804	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:198023753;1allele=+/-;version=Hapmap2;RS=rs836096238;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	205957305	205957404	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:198031353;1allele=T/C;version=Hapmap2;RS=rs130175904;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	205959377	205959476	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:198033425;1allele=C/A;version=Hapmap2;RS=rs829242435;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	205962284	205962383	.	+	.	Name=Ear_height;B73v2_pos=5:198036332;1allele=T/G;version=Hapmap1;RS=rs132270781;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	205962831	205962930	.	+	.	Name=Ear_height;B73v2_pos=5:198036879;1allele=A/G;version=Hapmap2;RS=rs277931295;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	205964366	205964465	.	+	.	Name=Plant_height;B73v2_pos=5:198038414;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205964366	205964465	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:198038414;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205964366	205964465	.	+	.	Name=Ear_height;B73v2_pos=5:198038414;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	205964593	205964692	.	+	.	Name=Ear_height;B73v2_pos=5:198038641;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	206002919	206003018	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198076957;1allele=T/C;version=Hapmap2;RS=rs130176017;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	206052456	206052555	.	+	.	Name=Ear_height;B73v2_pos=5:198126501;1allele=G/A;version=Hapmap2;RS=rs826124183;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	206081633	206081732	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198157870;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	206112209	206112308	.	+	.	Name=Plant_height;B73v2_pos=5:198188450;1allele=G/A;version=Hapmap2;RS=rs848633777;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	206113721	206113820	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198189962;1allele=A/G;version=Hapmap2;RS=rs825366864;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	206127193	206127292	.	+	.	Name=Plant_height;B73v2_pos=5:198201382;1allele=C/A;version=Hapmap2;RS=rs132270968;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	206129462	206129561	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198203651;1allele=C/A;version=Hapmap2;RS=rs130176198;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	206129838	206129937	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:198204027;1allele=A/G;version=Hapmap2;RS=rs130176204;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	206132166	206132265	.	+	.	Name=Plant_height;B73v2_pos=5:198206355;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	206134239	206134338	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198208428;1allele=A/G;version=Hapmap2;RS=rs132271073;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	206198405	206198504	.	+	.	Name=Height_above_ear;B73v2_pos=5:198268901;1allele=A/G;version=Hapmap2;RS=rs812157481;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	206244555	206244654	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198315477;1allele=T/C;version=Hapmap2;RS=rs277931646;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	206244619	206244718	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198315541;1allele=T/C;version=Hapmap2;RS=rs1064345565;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	206299103	206299202	.	+	.	Name=Leaf_length;B73v2_pos=5:198367986;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	206649268	206649367	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198716544;1allele=A/G;version=Hapmap1;RS=rs132271312;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	206649996	206650095	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198717272;1allele=C/-;version=Hapmap1;RS=rs132271318;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	206656853	206656952	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:198774868;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	206722321	206722420	.	+	.	Name=Plant_height;B73v2_pos=5:198789741;1allele=CCGACG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	206724138	206724237	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:198791558;1allele=G/T;version=Hapmap2;RS=rs277932127;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	206724324	206724423	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:198791744;1allele=A/T;version=Hapmap2;RS=rs130177265;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	206727151	206727250	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198794567;1allele=G/A;version=Hapmap2;RS=rs130177297;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	206727258	206727357	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198794674;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	206727587	206727686	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198795003;1allele=A/G;version=Hapmap2;RS=rs130177301;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	206734810	206734909	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198802222;1allele=T/C;version=Hapmap2;RS=rs831771757;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	206747859	206747958	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198815272;1allele=C/A;version=Hapmap2;RS=rs130177334;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	206747937	206748036	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198815350;1allele=G/C;version=Hapmap1;RS=rs130177336;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	206748184	206748283	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:198815597;1allele=A/G;version=Hapmap2;RS=rs132271592;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	206749211	206749310	.	+	.	Name=Plant_height;B73v2_pos=5:198816624;1allele=C/A;version=Hapmap2;RS=rs844651449;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	206749248	206749347	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:198816661;1allele=G/A;version=Hapmap2;RS=rs828425075;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	206752267	206752366	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:198819680;1allele=C/T;version=Hapmap1;RS=rs132271631;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	206811570	206811669	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:198878652;1allele=T/C;version=Hapmap2;RS=rs132271723;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	206817130	206817229	.	+	.	Name=Tassel_length;B73v2_pos=5:198884212;1allele=C/T;version=Hapmap2;RS=rs810050511;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	207118233	207118332	.	+	.	Name=Tassel_length;B73v2_pos=5:199168469;1allele=A/G;version=Hapmap1;RS=rs130177962;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	207119708	207119806	.	+	.	Name=Ear_height;B73v2_pos=5:199169945;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	207154752	207154851	.	+	.	Name=Ear_height;B73v2_pos=5:199191560;1allele=G/A;version=Hapmap2;RS=rs1062080722;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	207166891	207166990	.	+	.	Name=Tassel_length;B73v2_pos=5:199203699;1allele=T/C;version=Hapmap2;RS=rs130177996;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	207167184	207167283	.	+	.	Name=Starch;B73v2_pos=5:199203992;1allele=A/G;version=Hapmap2;RS=rs277932519;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	207172812	207172911	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:199209620;1allele=C/T;version=Hapmap1;RS=rs132272083;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	207185059	207185158	.	+	.	Name=Nitrate;B73v2_pos=5:199221862;1allele=G/T;version=Hapmap1;RS=rs831980375;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	207191744	207191843	.	+	.	Name=Nitrate;B73v2_pos=5:199228547;1allele=+/-;version=Hapmap2;RS=rs839120904;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	207193891	207193990	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:199230694;1allele=G/C;version=Hapmap2;RS=rs840956222;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	207194893	207194992	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:199231696;1allele=A/G;version=Hapmap2;RS=rs132272162;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	207195197	207195296	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:199232000;1allele=A/G;version=Hapmap2;RS=rs132272168;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	207260868	207260967	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:199294123;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	207278782	207278881	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:199335233;1allele=A/G;version=Hapmap2;RS=rs820173398;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	207333166	207333265	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:199390603;1allele=C/G;version=Hapmap1;RS=rs130178454;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	207333305	207333404	.	+	.	Name=Tassel_length;B73v2_pos=5:199390742;1allele=A/G;version=Hapmap2;RS=rs132272576;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	207338412	207338511	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:199395849;1allele=A/C;version=Hapmap2;RS=rs277932738;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	207338424	207338523	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:199395861;1allele=C/T;version=Hapmap2;RS=rs825241671;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	207349136	207349235	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:199406573;1allele=C/T;version=Hapmap2;RS=rs834408738;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	207368389	207368488	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:199426851;1allele=C/T;version=Hapmap2;RS=rs838498625;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	207383547	207383646	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:199442011;1allele=A/G;version=Hapmap2;RS=rs277932885;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	207530484	207530583	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:199594980;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	207581708	207581807	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:199644449;1allele=A/G;version=Hapmap2;RS=rs130179117;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	207645722	207645821	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:199706624;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	207650997	207651096	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:199711899;1allele=G/A;version=Hapmap2;RS=rs130179351;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	207660894	207660993	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:199721796;1allele=G/A;version=Hapmap2;RS=rs277933303;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	207674193	207674292	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:199735095;1allele=T/C;version=Hapmap2;RS=rs132273088;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	207674314	207674413	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:199735216;1allele=G/A;version=Hapmap1;RS=rs132273094;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	207914001	207914100	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:199973943;1allele=A/T;version=Hapmap2;RS=rs277933787;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	207918487	207918586	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:199978429;1allele=G/C;version=Hapmap1;RS=rs132273295;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	207919612	207919711	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:199979554;1allele=G/T;version=Hapmap2;RS=rs814715079;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	207935447	207935546	.	+	.	Name=Plant_height;B73v2_pos=5:199995389;1allele=A/T;version=Hapmap2;RS=rs812693056;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	208092099	208092198	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:200115919;1allele=G/A;version=Hapmap2;RS=rs277933979;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	208092099	208092198	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:200115919;1allele=G/A;version=Hapmap2;RS=rs277933979;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	208093560	208093659	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:200117380;1allele=G/C;version=Hapmap2;RS=rs130180100;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	208354062	208354161	.	+	.	Name=Nitrate;B73v2_pos=5:200293519;1allele=T/C;version=Hapmap1;RS=rs132273741;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	208354844	208354943	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:200294301;1allele=T/G;version=Hapmap2;RS=rs844607214;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	208429197	208429296	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:200368669;1allele=A/G;version=Hapmap2;RS=rs132273878;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	208430286	208430385	.	+	.	Name=Ear_height;B73v2_pos=5:200369758;1allele=A/T;version=Hapmap1;RS=rs132273901;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	208431203	208431302	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:200370675;1allele=C/G;version=Hapmap2;RS=rs727378029;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	208451377	208451476	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:200384686;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	208497272	208497371	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:200439891;1allele=C/T;version=Hapmap1;RS=rs725264182;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	208497272	208497371	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:200439891;1allele=C/T;version=Hapmap2;RS=rs725264182;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	208610512	208610611	.	+	.	Name=Ear_height;B73v2_pos=5:200529881;1allele=C/T;version=Hapmap2;RS=rs277934612;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	208715003	208715102	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:200675174;1allele=G/A;version=Hapmap2;RS=rs824520041;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	208739042	208739141	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:200653210;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	208741170	208741269	.	+	.	Name=Tassel_length;B73v2_pos=5:200651082;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	208742800	208742899	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:200649453;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	208806506	208806605	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:200687085;1allele=A/G;version=Hapmap2;RS=rs130180865;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	208810633	208810732	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:200691212;1allele=A/G;version=Hapmap2;RS=rs838097699;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	208852274	208852373	.	+	.	Name=Ear_height;B73v2_pos=5:200770498;1allele=C/A;version=Hapmap2;RS=rs132274712;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	208955372	208955471	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:200873596;1allele=A/C;version=Hapmap2;RS=rs812805084;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	208990317	208990416	.	+	.	Name=Tassel_length;B73v2_pos=5:200908541;1allele=G/A;version=Hapmap1;RS=rs808962794;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	208991341	208991440	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:200909565;1allele=A/G;version=Hapmap1;RS=rs132275019;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209110214	209110313	.	+	.	Name=Nitrate;B73v2_pos=5:201035973;1allele=G/A;version=Hapmap1;RS=rs132275205;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209159499	209159598	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:201074426;1allele=T/G;version=Hapmap1;RS=rs130181564;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	209160389	209160488	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:201075316;1allele=G/C;version=Hapmap2;RS=rs805317346;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	209201585	209201684	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201115301;1allele=C/T;version=Hapmap2;RS=rs277935571;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	209271930	209272029	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:201173651;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209288613	209288712	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:201188997;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209311844	209311943	.	+	.	Name=Starch;B73v2_pos=5:201229685;1allele=G/A;version=Hapmap2;RS=rs132275467;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209311920	209312019	.	+	.	Name=Ear_height;B73v2_pos=5:201229761;1allele=G/C;version=Hapmap1;RS=rs132275470;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209312810	209312909	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201230651;1allele=A/C;version=Hapmap2;RS=rs821291135;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	209312831	209312930	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201230672;1allele=T/G;version=Hapmap2;RS=rs819555345;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	209315747	209315846	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201233588;1allele=T/C;version=Hapmap2;RS=rs808092361;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209337232	209337331	.	+	.	Name=Stalk_strength;B73v2_pos=5:201242054;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209352119	209352218	.	+	.	Name=Plant_height;B73v2_pos=5:201256941;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209358018	209358117	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201262840;1allele=A/G;version=Hapmap2;RS=rs130181721;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209359528	209359627	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:201264350;1allele=C/G;version=Hapmap2;RS=rs132275541;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	209363250	209363349	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201268072;1allele=G/A;version=Hapmap2;RS=rs130181783;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209411554	209411653	.	+	.	Name=Glucose;B73v2_pos=5:201316794;1allele=G/A;version=Hapmap2;RS=rs819874654;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209416209	209416308	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:201321449;1allele=G/A;version=Hapmap2;RS=rs819426738;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209419046	209419145	.	+	.	Name=Plant_height;B73v2_pos=5:201324286;1allele=G/A;version=Hapmap2;RS=rs1063703389;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209468151	209468250	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201364996;1allele=C/T;version=Hapmap2;RS=rs130181947;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	209470341	209470440	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201367186;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209479907	209480006	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:201377245;1allele=G/A;version=Hapmap2;RS=rs816702930;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209480395	209480494	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:201377733;1allele=C/T;version=Hapmap2;RS=rs821775790;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209482099	209482198	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:201379437;1allele=G/A;version=Hapmap2;RS=rs834450016;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209493676	209493775	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:201391013;1allele=G/C;version=Hapmap2;RS=rs132275678;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	209495175	209495274	.	+	.	Name=Ear_height;B73v2_pos=5:201392512;1allele=A/C;version=Hapmap1;RS=rs725611369;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	209495415	209495514	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:201392752;1allele=/GGATC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209507293	209507392	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201404631;1allele=G/A;version=Hapmap2;RS=rs825710221;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209508528	209508627	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201405866;1allele=T/C;version=Hapmap2;RS=rs1061789603;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209558368	209558467	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:201452664;1allele=C/G;version=Hapmap2;RS=rs132275780;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	209560610	209560709	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:201454906;1allele=G/T;version=Hapmap2;RS=rs277935901;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	209560610	209560709	.	+	.	Name=Plant_height;B73v2_pos=5:201454906;1allele=G/T;version=Hapmap2;RS=rs277935901;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	209560610	209560709	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201454906;1allele=G/T;version=Hapmap2;RS=rs277935901;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	209560610	209560709	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:201454906;1allele=G/T;version=Hapmap2;RS=rs277935901;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	209563386	209563485	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:201457683;1allele=C/T;version=Hapmap2;RS=rs130182125;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209564173	209564272	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:201458470;1allele=C/T;version=Hapmap2;RS=rs130182133;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209565525	209565624	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201459822;1allele=A/G;version=Hapmap2;RS=rs277935958;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209571966	209572065	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201466263;1allele=A/G;version=Hapmap2;RS=rs1061215468;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209710122	209710221	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:201612428;1allele=G/A;version=Hapmap2;RS=rs816708892;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209712774	209712873	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:201615080;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209723864	209723963	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201633027;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209724789	209724888	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201632102;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209724789	209724888	.	+	.	Name=Plant_height;B73v2_pos=5:201632102;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209751783	209751882	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201666626;1allele=C/T;version=Hapmap2;RS=rs130182576;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209752139	209752238	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201666982;1allele=C/G;version=Hapmap2;RS=rs277936313;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	209752150	209752249	.	+	.	Name=Plant_height;B73v2_pos=5:201666993;1allele=G/C;version=Hapmap2;RS=rs277936314;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	209752150	209752249	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201666993;1allele=G/C;version=Hapmap2;RS=rs277936314;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	209752157	209752256	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201667000;1allele=T/C;version=Hapmap2;RS=rs277936315;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209756215	209756314	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201671058;1allele=C/G;version=Hapmap2;RS=rs816742783;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	209756642	209756741	.	+	.	Name=Plant_height;B73v2_pos=5:201671485;1allele=T/A;version=Hapmap2;RS=rs846295020;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	209774411	209774510	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201689596;1allele=T/G;version=Hapmap2;RS=rs819720225;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	209776592	209776691	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201691778;1allele=T/C;version=Hapmap2;RS=rs277936339;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	209776592	209776691	.	+	.	Name=Plant_height;B73v2_pos=5:201691778;1allele=T/C;version=Hapmap2;RS=rs277936339;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	209777490	209777589	.	+	.	Name=Plant_height;B73v2_pos=5:201692676;1allele=T/G;version=Hapmap2;RS=rs130182613;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	209778186	209778285	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201693372;1allele=C/A;version=Hapmap2;RS=rs277936347;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	209779125	209779224	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:201694311;1allele=A/G;version=Hapmap2;RS=rs843127018;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209806926	209807025	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201714885;1allele=C/T;version=Hapmap2;RS=rs132276101;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	209807367	209807466	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:201715326;1allele=C/A;version=Hapmap2;RS=rs1064371474;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	209807592	209807691	.	+	.	Name=Leaf_length;B73v2_pos=5:201715551;1allele=C/T;version=Hapmap2;RS=rs277936373;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	209840566	209840665	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:201759707;1allele=G/A;version=Hapmap2;RS=rs836187519;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	209854428	209854527	.	+	.	Name=Ear_height;B73v2_pos=5:201773569;1allele=T/A;version=Hapmap2;RS=rs841082362;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	209904159	209904258	.	+	.	Name=Leaf_length;B73v2_pos=5:201863433;1allele=T/C;version=Hapmap2;RS=rs130182675;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209906061	209906160	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:201865335;1allele=G/T;version=Hapmap2;RS=rs806983248;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	209910111	209910210	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:201869386;1allele=C/T;version=Hapmap2;RS=rs725690019;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209917294	209917393	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:201876569;1allele=A/G;version=Hapmap2;RS=rs806848330;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	209917932	209918031	.	+	.	Name=Leaf_length;B73v2_pos=5:201877207;1allele=A/C;version=Hapmap2;RS=rs1062730382;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	209973497	209973596	.	+	.	Name=Plant_height;B73v2_pos=5:201933037;1allele=T/C;version=Hapmap2;RS=rs277936535;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209973497	209973596	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:201933037;1allele=T/C;version=Hapmap2;RS=rs277936535;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	209976185	209976284	.	+	.	Name=Leaf_length;B73v2_pos=5:201935723;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	209977227	209977326	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201936765;1allele=A/C;version=Hapmap2;RS=rs130182766;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	210034290	210034389	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:201994656;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210034307	210034406	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:201994673;1allele=C/T;version=Hapmap1;RS=rs132276375;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	210172241	210172340	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:202132170;1allele=A/G;version=Hapmap2;RS=rs130183259;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	210181247	210181346	.	+	.	Name=Tassel_length;B73v2_pos=5:202141360;1allele=G/A;version=Hapmap2;RS=rs821665309;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	210231571	210231670	.	+	.	Name=Leaf_length;B73v2_pos=5:202205769;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210248469	210248568	.	+	.	Name=Starch;B73v2_pos=5:202195983;1allele=G/A;version=Hapmap2;RS=rs130183307;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	210307539	210307638	.	+	.	Name=Leaf_length;B73v2_pos=5:202251788;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210338432	210338531	.	+	.	Name=Plant_height;B73v2_pos=5:202282850;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210345495	210345594	.	+	.	Name=Ear_height;B73v2_pos=5:202289913;1allele=G/T;version=Hapmap2;RS=rs1062562655;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	210353661	210353760	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:202298079;1allele=C/G;version=Hapmap2;RS=rs832131301;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	210354194	210354293	.	+	.	Name=Starch;B73v2_pos=5:202298612;1allele=C/T;version=Hapmap2;RS=rs132276749;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	210357639	210357738	.	+	.	Name=Leaf_length;B73v2_pos=5:202302057;1allele=A/G;version=Hapmap2;RS=rs803953004;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	210358314	210358413	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:202302732;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210362480	210362579	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:202306898;1allele=G/C;version=Hapmap2;RS=rs277937501;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	210363483	210363582	.	+	.	Name=Leaf_length;B73v2_pos=5:202307901;1allele=G/T;version=Hapmap2;RS=rs831428866;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	210363530	210363629	.	+	.	Name=Ear_height;B73v2_pos=5:202307948;1allele=A/G;version=Hapmap2;RS=rs815256381;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	210365132	210365231	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:202309550;1allele=A/G;version=Hapmap2;RS=rs132276909;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	210387369	210387468	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:202334155;1allele=A/G;version=Hapmap2;RS=rs277937558;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	210411724	210411823	.	+	.	Name=Stalk_strength;B73v2_pos=5:202358512;1allele=G/A;version=Hapmap2;RS=rs828839867;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	210448704	210448803	.	+	.	Name=Leaf_length;B73v2_pos=5:202396099;1allele=T/C;version=Hapmap1;RS=rs132276959;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	210469049	210469148	.	+	.	Name=Tassel_length;B73v2_pos=5:202416081;1allele=C/T;version=Hapmap2;RS=rs727268237;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	210475002	210475101	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:202422034;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210543408	210543507	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:202497834;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210543408	210543507	.	+	.	Name=Plant_height;B73v2_pos=5:202497834;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210543408	210543507	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:202497834;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210543419	210543518	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:202497845;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210545172	210545271	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:202499598;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210545172	210545271	.	+	.	Name=Plant_height;B73v2_pos=5:202499598;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210545172	210545271	.	+	.	Name=Ear_height;B73v2_pos=5:202499598;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210545824	210545923	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:202500250;1allele=T/C;version=Hapmap2;RS=rs1063554615;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	210545824	210545923	.	+	.	Name=Plant_height;B73v2_pos=5:202500250;1allele=T/C;version=Hapmap2;RS=rs1063554615;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	210720245	210720344	.	+	.	Name=Total_amino_acids;B73v2_pos=5:202667354;1allele=C/G;version=Hapmap2;RS=rs806241751;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	210766270	210766369	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:202713391;1allele=C/T;version=Hapmap2;RS=rs838858686;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	210795839	210795938	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:166279078;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210867577	210867676	.	+	.	Name=Plant_height;B73v2_pos=5:202819231;1allele=G/A;version=Hapmap1;RS=rs277938269;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	210873151	210873250	.	+	.	Name=Leaf_length;B73v2_pos=5:202824778;1allele=A/T;version=Hapmap2;RS=rs1064482625;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	210875295	210875394	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:202826922;1allele=T/A;version=Hapmap2;RS=rs277938316;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	210875329	210875428	.	+	.	Name=Ear_height;B73v2_pos=5:202826956;1allele=C/A;version=Hapmap2;RS=rs277938318;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	210875963	210876062	.	+	.	Name=Tassel_length;B73v2_pos=5:202827590;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	210953367	210953466	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:202924845;1allele=A/G;version=Hapmap2;RS=rs277938355;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	210957836	210957935	.	+	.	Name=Tassel_length;B73v2_pos=5:202929314;1allele=T/G;version=Hapmap2;RS=rs1063925064;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	210958586	210958685	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:202930064;1allele=T/G;version=Hapmap2;RS=rs277938467;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	211013949	211014048	.	+	.	Name=Plant_height;B73v2_pos=5:202989912;1allele=A/C;version=Hapmap2;RS=rs130184555;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	211139611	211139710	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:203108087;1allele=C/T;version=Hapmap2;RS=rs835941388;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211182290	211182389	.	+	.	Name=Stalk_strength;B73v2_pos=5:203150780;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211207937	211208036	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:203176427;1allele=C/T;version=Hapmap2;RS=rs847322328;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211237760	211237859	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:203205848;1allele=A/G;version=Hapmap2;RS=rs830145278;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211253673	211253772	.	+	.	Name=Stalk_strength;B73v2_pos=5:203234135;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211332418	211332517	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:203302436;1allele=T/C;version=Hapmap2;RS=rs277938944;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	211337893	211337992	.	+	.	Name=Tassel_length;B73v2_pos=5:203307913;1allele=A/G;version=Hapmap2;RS=rs277938995;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211345330	211345429	.	+	.	Name=Ear_height;B73v2_pos=5:203315350;1allele=A/G;version=Hapmap2;RS=rs834824469;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211358352	211358451	.	+	.	Name=Height_above_ear;B73v2_pos=5:203321451;1allele=C/T;version=Hapmap2;RS=rs1064300796;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211358675	211358774	.	+	.	Name=Tassel_length;B73v2_pos=5:203321774;1allele=A/G;version=Hapmap2;RS=rs1063366777;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211368501	211368600	.	+	.	Name=Plant_height;B73v2_pos=5:203331602;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211405170	211405269	.	+	.	Name=Ear_height;B73v2_pos=5:203367592;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211405170	211405269	.	+	.	Name=Plant_height;B73v2_pos=5:203367592;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211439271	211439370	.	+	.	Name=Ear_height;B73v2_pos=5:203399433;1allele=C/T;version=Hapmap2;RS=rs132277965;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211439379	211439478	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:203399541;1allele=C/G;version=Hapmap2;RS=rs130185381;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	211441941	211442040	.	+	.	Name=Height_above_ear;B73v2_pos=5:203402103;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211477852	211477951	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:203438016;1allele=G/A;version=Hapmap2;RS=rs831193278;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	211495773	211495872	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:203455939;1allele=C/A;version=Hapmap2;RS=rs813383989;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	211590258	211590357	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:203545505;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211615686	211615785	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:203569800;1allele=A/G;version=Hapmap2;RS=rs814164142;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211634208	211634307	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:203588322;1allele=A/G;version=Hapmap2;RS=rs1064633387;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211634208	211634307	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:203588322;1allele=A/G;version=Hapmap2;RS=rs1064633387;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211650567	211650666	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:203604681;1allele=A/G;version=Hapmap2;RS=rs819310663;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211659726	211659825	.	+	.	Name=Ear_height;B73v2_pos=5:203613840;1allele=A/G;version=Hapmap1;RS=rs132278033;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	211660582	211660681	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:203614696;1allele=G/C;version=Hapmap2;RS=rs833717675;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	211660672	211660771	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:203614786;1allele=T/C;version=Hapmap1;RS=rs132278059;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	211663439	211663538	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:203617493;1allele=G/C;version=Hapmap1;RS=rs132278092;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	211665824	211665923	.	+	.	Name=Total_amino_acids;B73v2_pos=5:203619878;1allele=/GAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211666274	211666373	.	+	.	Name=Tassel_length;B73v2_pos=5:203620328;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211667600	211667699	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:203621654;1allele=G/A;version=Hapmap1;RS=rs132278178;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	211667652	211667751	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:203621706;1allele=A/G;version=Hapmap1;RS=rs132278179;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211668850	211668949	.	+	.	Name=Tassel_length;B73v2_pos=5:203622904;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211669093	211669192	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:203623147;1allele=G/C;version=Hapmap2;RS=rs277939273;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	211672539	211672638	.	+	.	Name=Tassel_length;B73v2_pos=5:203626593;1allele=T/G;version=Hapmap2;RS=rs833052244;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	211672554	211672653	.	+	.	Name=Tassel_length;B73v2_pos=5:203626608;1allele=T/C;version=Hapmap2;RS=rs130185581;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211672609	211672708	.	+	.	Name=Tassel_length;B73v2_pos=5:203626663;1allele=C/T;version=Hapmap2;RS=rs277939314;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	211675870	211675969	.	+	.	Name=Plant_height;B73v2_pos=5:203629920;1allele=T/G;version=Hapmap1;RS=rs132278243;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	211676843	211676942	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:203630893;1allele=C/A;version=Hapmap2;RS=rs131182907;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	211678463	211678562	.	+	.	Name=Tassel_length;B73v2_pos=5:203632513;1allele=T/C;version=Hapmap2;RS=rs810783400;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	211678826	211678925	.	+	.	Name=Tassel_length;B73v2_pos=5:203632876;1allele=G/A;version=Hapmap2;RS=rs822989163;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	211678832	211678931	.	+	.	Name=Tassel_length;B73v2_pos=5:203632882;1allele=C/G;version=Hapmap2;RS=rs829572020;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	211694413	211694512	.	+	.	Name=Plant_height;B73v2_pos=5:203648463;1allele=T/C;version=Hapmap2;RS=rs130185644;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211698343	211698442	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:203652393;1allele=T/C;version=Hapmap1;RS=rs132278289;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	211698427	211698526	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:203652477;1allele=T/C;version=Hapmap2;RS=rs277939401;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	211744149	211744248	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:203698192;1allele=C/T;version=Hapmap2;RS=rs130185674;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211842621	211842720	.	+	.	Name=Protein;B73v2_pos=5:203795935;1allele=A/G;version=Hapmap2;RS=rs837083405;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	211868065	211868164	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:203831138;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211876318	211876417	.	+	.	Name=Protein;B73v2_pos=5:203817731;1allele=T/C;version=Hapmap2;RS=rs130185899;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	211903954	211904053	.	+	.	Name=Protein;B73v2_pos=5:203867947;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211974215	211974315	.	+	.	Name=Protein;B73v2_pos=5:203946091;1allele=G/T;version=Hapmap2;RS=rs843144495;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	211975851	211975950	.	+	.	Name=Protein;B73v2_pos=5:203891023;1allele=C/A;version=Hapmap2;RS=rs277939808;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	211976244	211976343	.	+	.	Name=Protein;B73v2_pos=5:203891416;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	211976518	211976617	.	+	.	Name=Protein;B73v2_pos=5:203891689;1allele=G/A;version=Hapmap2;RS=rs1062492853;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211979143	211979242	.	+	.	Name=Protein;B73v2_pos=5:203894317;1allele=C/T;version=Hapmap2;RS=rs277939828;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	211979908	211980007	.	+	.	Name=Protein;B73v2_pos=5:203895082;1allele=G/A;version=Hapmap2;RS=rs277939838;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	211988332	211988431	.	+	.	Name=Protein;B73v2_pos=5:203903509;1allele=C/T;version=Hapmap2;RS=rs1062478465;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212033548	212033647	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=5:203985656;1allele=C/T;version=Hapmap2;RS=rs815287338;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212070999	212071098	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:204020784;1allele=G/T;version=Hapmap2;RS=rs726240803;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	212073633	212073732	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204023418;1allele=C/T;version=Hapmap2;RS=rs812373471;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212076657	212076756	.	+	.	Name=Protein;B73v2_pos=5:204026444;1allele=C/A;version=Hapmap1;RS=rs132278618;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212095753	212095852	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:204058144;1allele=A/G;version=Hapmap2;RS=rs277940293;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	212095753	212095852	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:204058144;1allele=A/G;version=Hapmap2;RS=rs277940293;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	212096917	212097016	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:204059308;1allele=G/A;version=Hapmap2;RS=rs277940316;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	212122935	212123034	.	+	.	Name=Ear_height;B73v2_pos=5:204077116;1allele=G/A;version=Hapmap1;RS=rs132278712;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	212134655	212134754	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204088249;1allele=T/C;version=Hapmap2;RS=rs823037937;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212135872	212135971	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:204089466;1allele=A/T;version=Hapmap2;RS=rs845405241;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	212140762	212140861	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:204094356;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212145204	212145303	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:204098795;1allele=C/T;version=Hapmap2;RS=rs130186288;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212156923	212157022	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204110514;1allele=G/C;version=Hapmap2;RS=rs810916242;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	212169399	212169498	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204122835;1allele=G/A;version=Hapmap2;RS=rs849480943;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	212169859	212169958	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204123295;1allele=T/C;version=Hapmap2;RS=rs819521014;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212169900	212169999	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204123336;1allele=C/G;version=Hapmap2;RS=rs840274342;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	212170074	212170173	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204123510;1allele=C/A;version=Hapmap2;RS=rs815003332;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	212171006	212171105	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204124442;1allele=A/G;version=Hapmap2;RS=rs832993642;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	212171056	212171155	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204124492;1allele=T/C;version=Hapmap2;RS=rs1063222331;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212213809	212213908	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204167244;1allele=T/C;version=Hapmap2;RS=rs808632390;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212214037	212214136	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204167472;1allele=A/G;version=Hapmap2;RS=rs869530792;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	212215676	212215775	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204169111;1allele=T/C;version=Hapmap2;RS=rs132278992;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212216693	212216792	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:204170128;1allele=G/A;version=Hapmap1;RS=rs132278962;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	212221135	212221234	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:204174570;1allele=G/T;version=Hapmap2;RS=rs132278935;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	212240763	212240862	.	+	.	Name=Leaf_length;B73v2_pos=5:204194198;1allele=A/G;version=Hapmap2;RS=rs812761608;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	212241619	212241718	.	+	.	Name=Leaf_length;B73v2_pos=5:204195054;1allele=C/T;version=Hapmap2;RS=rs132278832;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212242649	212242748	.	+	.	Name=Tassel_length;B73v2_pos=5:204196084;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212284825	212284924	.	+	.	Name=Leaf_length;B73v2_pos=5:204299715;1allele=C/T;version=Hapmap2;RS=rs130186693;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212308835	212308934	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:204315699;1allele=A/G;version=Hapmap2;RS=rs130186636;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	212328632	212328731	.	+	.	Name=Tassel_length;B73v2_pos=5:204335494;1allele=C/T;version=Hapmap2;RS=rs838250084;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212344850	212344949	.	+	.	Name=Leaf_length;B73v2_pos=5:204222580;1allele=A/C;version=Hapmap1;RS=rs130186533;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	212482718	212482817	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:204430185;1allele=A/G;version=Hapmap2;RS=rs824674945;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	212583677	212583776	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:204526460;1allele=C/T;version=Hapmap2;RS=rs277941515;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212596266	212596365	.	+	.	Name=Nitrate;B73v2_pos=5:204539051;1allele=A/C;version=Hapmap1;RS=rs132279707;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	212597023	212597122	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:204539808;1allele=C/A;version=Hapmap2;RS=rs847831735;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	212597221	212597320	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:204540006;1allele=C/T;version=Hapmap2;RS=rs804424577;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212606116	212606215	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204548901;1allele=T/C;version=Hapmap2;RS=rs132279597;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212636667	212636766	.	+	.	Name=Leaf_width;B73v2_pos=5:204579689;1allele=C/T;version=Hapmap2;RS=rs812699024;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	212640009	212640108	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:204583032;1allele=G/A;version=Hapmap2;RS=rs844109449;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	212649975	212650074	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204592998;1allele=T/C;version=Hapmap2;RS=rs727316087;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212651190	212651289	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204594213;1allele=T/C;version=Hapmap1;RS=rs132279996;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	212775174	212775273	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204843424;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212792680	212792779	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:204825918;1allele=C/T;version=Hapmap2;RS=rs805865785;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	212792974	212793073	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:204825624;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212794772	212794871	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204823826;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212872318	212872417	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:204746286;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212872535	212872634	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:204746069;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212890692	212890791	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:204727913;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	212989091	212989190	.	+	.	Name=Height_above_ear;B73v2_pos=5:204626749;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213008268	213008367	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204607572;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213010532	213010631	.	+	.	Name=Ear_height;B73v2_pos=5:204605306;1allele=G/A;version=Hapmap1;RS=rs869533138;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213010532	213010631	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:204605306;1allele=G/A;version=Hapmap1;RS=rs869533138;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213100596	213100695	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:204865984;1allele=G/A;version=Hapmap2;RS=rs819276186;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213100619	213100718	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:204866007;1allele=C/G;version=Hapmap1;RS=rs132280019;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213101899	213101998	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204867287;1allele=T/A;version=Hapmap2;RS=rs132280046;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	213102274	213102373	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:204867662;1allele=/CGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213102274	213102373	.	+	.	Name=Plant_height;B73v2_pos=5:204867662;1allele=/CGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213119404	213119503	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204885625;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213128811	213128910	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204895034;1allele=G/A;version=Hapmap2;RS=rs130187229;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213128991	213129090	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204895214;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213129169	213129268	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204895392;1allele=C/T;version=Hapmap2;RS=rs847088595;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	213137333	213137432	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:204903556;1allele=G/C;version=Hapmap2;RS=rs130187278;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	213137491	213137590	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:204903714;1allele=C/T;version=Hapmap2;RS=rs130187280;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213137535	213137634	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:204903758;1allele=A/T;version=Hapmap1;RS=rs132280153;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	213139466	213139565	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204905689;1allele=A/G;version=Hapmap1;RS=rs132280183;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213140322	213140421	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204906545;1allele=G/A;version=Hapmap2;RS=rs277942604;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213141118	213141217	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204907341;1allele=C/A;version=Hapmap2;RS=rs277942616;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	213142221	213142320	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:204908444;1allele=C/T;version=Hapmap2;RS=rs130187313;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213144030	213144129	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204910253;1allele=A/C;version=Hapmap2;RS=rs277942661;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	213144226	213144325	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:204910449;1allele=A/G;version=Hapmap2;RS=rs834045041;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213145696	213145795	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204911919;1allele=G/A;version=Hapmap2;RS=rs277942670;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213145739	213145838	.	+	.	Name=Sucrose;B73v2_pos=5:204911962;1allele=C/T;version=Hapmap2;RS=rs277942671;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	213148244	213148343	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:204914467;1allele=G/A;version=Hapmap2;RS=rs277942708;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213250120	213250219	.	+	.	Name=Starch;B73v2_pos=5:205014869;1allele=T/A;version=Hapmap2;RS=rs848768340;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	213266512	213266611	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:205031261;1allele=T/C;version=Hapmap2;RS=rs277942949;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213272800	213272899	.	+	.	Name=Sucrose;B73v2_pos=5:205037548;1allele=T/G;version=Hapmap2;RS=rs132280347;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	213273080	213273179	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205037828;1allele=G/A;version=Hapmap1;RS=rs869346497;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213274379	213274478	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205039127;1allele=C/T;version=Hapmap2;RS=rs130187537;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213299209	213299308	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205063489;1allele=G/A;version=Hapmap2;RS=rs818860060;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213305518	213305617	.	+	.	Name=Leaf_width;B73v2_pos=5:205069798;1allele=G/C;version=Hapmap2;RS=rs817363463;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	213305695	213305794	.	+	.	Name=Leaf_width;B73v2_pos=5:205069975;1allele=C/T;version=Hapmap2;RS=rs804273579;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213305804	213305903	.	+	.	Name=Leaf_width;B73v2_pos=5:205070084;1allele=A/C;version=Hapmap2;RS=rs805387417;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	213305938	213306037	.	+	.	Name=Cob_diameter;B73v2_pos=5:205070218;1allele=T/A;version=Hapmap2;RS=rs277943116;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	213314330	213314429	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:205078610;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213365299	213365398	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:205132687;1allele=T/C;version=Hapmap2;RS=rs808543731;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	213375999	213376098	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:205143455;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213376865	213376964	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:205144321;1allele=C/A;version=Hapmap2;RS=rs849126275;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	213377673	213377772	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:205145129;1allele=/CG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213378108	213378207	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:205145564;1allele=A/G;version=Hapmap2;RS=rs807404178;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213379159	213379258	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205146615;1allele=C/T;version=Hapmap1;RS=rs132280623;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213385554	213385653	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:205153010;1allele=C/G;version=Hapmap2;RS=rs819792290;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	213464214	213464313	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205231682;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213464476	213464575	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205231944;1allele=A/C;version=Hapmap2;RS=rs848012138;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	213468672	213468771	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205236140;1allele=A/T;version=Hapmap2;RS=rs130187796;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	213469752	213469851	.	+	.	Name=Nitrate;B73v2_pos=5:205237220;1allele=G/A;version=Hapmap1;RS=rs130187797;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213482977	213483076	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:205250442;1allele=A/G;version=Hapmap2;RS=rs277943488;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213513089	213513188	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:205280553;1allele=T/C;version=Hapmap2;RS=rs132281174;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213533958	213534057	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:205301422;1allele=T/C;version=Hapmap2;RS=rs809574916;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	213541620	213541719	.	+	.	Name=Protein;B73v2_pos=5:205309084;1allele=T/C;version=Hapmap2;RS=rs277943595;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213604808	213604907	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205372267;1allele=A/G;version=Hapmap2;RS=rs819586274;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213609968	213610067	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205377427;1allele=G/A;version=Hapmap2;RS=rs825788749;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	213622405	213622504	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:205388836;1allele=/CCG;version=Hapmap1;RS=rs132281488;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	213695046	213695145	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:205475293;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213696827	213696926	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205477074;1allele=A/C;version=Hapmap1;RS=rs848872247;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	213698792	213698891	.	+	.	Name=Cob_diameter;B73v2_pos=5:205479039;1allele=C/T;version=Hapmap2;RS=rs842024143;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213716828	213716927	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:205497075;1allele=C/T;version=Hapmap2;RS=rs132281651;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213723346	213723445	.	+	.	Name=Sucrose;B73v2_pos=5:205503543;1allele=G/A;version=Hapmap2;RS=rs132281683;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213723346	213723445	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:205503543;1allele=G/A;version=Hapmap2;RS=rs132281683;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213724214	213724313	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:205504411;1allele=C/T;version=Hapmap2;RS=rs277944243;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213729113	213729212	.	+	.	Name=Height_above_ear;B73v2_pos=5:205509310;1allele=T/C;version=Hapmap2;RS=rs847260194;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	213745125	213745224	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:205525322;1allele=A/G;version=Hapmap2;RS=rs843574107;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213750103	213750202	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:205530300;1allele=/TCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213753379	213753478	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:205533576;1allele=/GGCGCT;version=Hapmap1;RS=rs1061654538;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213754224	213754323	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205534421;1allele=G/A;version=Hapmap2;RS=rs277944386;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	213763745	213763844	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205543942;1allele=T/G;version=Hapmap2;RS=rs132281896;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	213782548	213782647	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205562745;1allele=A/C;version=Hapmap1;RS=rs814051223;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	213881654	213881753	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205661764;1allele=C/G;version=Hapmap2;RS=rs830364951;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	213929730	213929829	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205709715;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213929730	213929829	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205709715;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	213933244	213933343	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205713229;1allele=C/T;version=Hapmap2;RS=rs130188444;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213961758	213961857	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205741743;1allele=T/C;version=Hapmap2;RS=rs277944802;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	213966826	213966925	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205746811;1allele=T/C;version=Hapmap2;RS=rs277944828;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	213966890	213966989	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:205746875;1allele=G/C;version=Hapmap2;RS=rs277944830;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	213968052	213968151	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205748037;1allele=C/G;version=Hapmap2;RS=rs132282238;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	213968052	213968151	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205748037;1allele=C/G;version=Hapmap2;RS=rs132282238;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	213971776	213971875	.	+	.	Name=Glutamate;B73v2_pos=5:205751759;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214002273	214002372	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205782194;1allele=C/A;version=Hapmap2;RS=rs277944913;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	214003092	214003191	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205783013;1allele=T/C;version=Hapmap2;RS=rs130188763;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214003975	214004074	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205783896;1allele=C/T;version=Hapmap2;RS=rs130188768;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214004923	214005022	.	+	.	Name=Plant_height;B73v2_pos=5:205784844;1allele=T/A;version=Hapmap2;RS=rs829443838;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	214004923	214005022	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:205784844;1allele=T/A;version=Hapmap2;RS=rs829443838;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	214005258	214005357	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205785179;1allele=G/C;version=Hapmap2;RS=rs130188783;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	214006228	214006327	.	+	.	Name=Leaf_width;B73v2_pos=5:205786149;1allele=G/A;version=Hapmap2;RS=rs130188795;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	214007975	214008074	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205787896;1allele=G/T;version=Hapmap2;RS=rs841546154;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	214007975	214008074	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205787896;1allele=G/T;version=Hapmap2;RS=rs841546154;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	214010739	214010838	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:205790660;1allele=T/C;version=Hapmap1;RS=rs130188844;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214011453	214011552	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205791374;1allele=G/A;version=Hapmap2;RS=rs132282517;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	214012689	214012788	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205792610;1allele=C/T;version=Hapmap2;RS=rs845858067;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214016172	214016271	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:205796093;1allele=C/A;version=Hapmap2;RS=rs845415449;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	214017445	214017544	.	+	.	Name=Nitrate;B73v2_pos=5:205797366;1allele=C/T;version=Hapmap2;RS=rs817723234;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214032375	214032474	.	+	.	Name=Ear_height;B73v2_pos=5:205812296;1allele=A/T;version=Hapmap2;RS=rs132282545;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	214044357	214044456	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205824267;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214044487	214044586	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205824397;1allele=C/G;version=Hapmap2;RS=rs277945038;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	214047236	214047335	.	+	.	Name=Tassel_length;B73v2_pos=5:205827130;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214048824	214048923	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205828718;1allele=G/A;version=Hapmap1;RS=rs831694591;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	214052706	214052805	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:205832599;1allele=T/C;version=Hapmap2;RS=rs845038411;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214078941	214079040	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205858833;1allele=C/G;version=Hapmap1;RS=rs132282737;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214096603	214096702	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205876495;1allele=G/A;version=Hapmap2;RS=rs823386947;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	214097125	214097224	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:205877017;1allele=A/G;version=Hapmap2;RS=rs277945173;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	214098001	214098100	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205877893;1allele=T/C;version=Hapmap2;RS=rs847547978;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214098001	214098100	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205877893;1allele=T/C;version=Hapmap2;RS=rs847547978;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214102350	214102449	.	+	.	Name=Ear_height;B73v2_pos=5:205882242;1allele=A/G;version=Hapmap2;RS=rs821164267;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	214146415	214146514	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:205926307;1allele=C/G;version=Hapmap2;RS=rs132282772;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	214146638	214146737	.	+	.	Name=Tassel_length;B73v2_pos=5:205926530;1allele=G/A;version=Hapmap2;RS=rs277945223;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	214147476	214147575	.	+	.	Name=Ear_height;B73v2_pos=5:205927368;1allele=T/A;version=Hapmap2;RS=rs132282779;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214147476	214147575	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:205927368;1allele=T/A;version=Hapmap2;RS=rs132282779;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214147476	214147575	.	+	.	Name=Plant_height;B73v2_pos=5:205927368;1allele=T/A;version=Hapmap2;RS=rs132282779;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214148252	214148351	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205928144;1allele=C/T;version=Hapmap2;RS=rs833610308;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214156561	214156660	.	+	.	Name=Nitrate;B73v2_pos=5:205936453;1allele=G/C;version=Hapmap2;RS=rs130189169;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	214163094	214163193	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:205942986;1allele=T/G;version=Hapmap1;RS=rs132282965;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	214166557	214166656	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:205946449;1allele=C/T;version=Hapmap2;RS=rs277945307;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214166557	214166656	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:205946449;1allele=C/T;version=Hapmap2;RS=rs277945307;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214167120	214167219	.	+	.	Name=Height_above_ear;B73v2_pos=5:205947012;1allele=G/A;version=Hapmap2;RS=rs130189239;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	214167142	214167241	.	+	.	Name=Height_above_ear;B73v2_pos=5:205947034;1allele=C/T;version=Hapmap2;RS=rs810587780;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214229508	214229607	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:206009286;1allele=G/T;version=Hapmap2;RS=rs130189276;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	214229913	214230012	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:206009691;1allele=G/C;version=Hapmap2;RS=rs277945343;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	214241148	214241247	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:206020920;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214251791	214251890	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:206031563;1allele=T/A;version=Hapmap2;RS=rs801551951;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	214257003	214257102	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:206036775;1allele=T/C;version=Hapmap2;RS=rs132283125;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214257370	214257469	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:206037142;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214266267	214266366	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:206046039;1allele=C/-;version=Hapmap1;RS=rs132283155;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	214266641	214266740	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:206046413;1allele=T/C;version=Hapmap1;RS=rs132283164;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	214291238	214291337	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:206071012;1allele=C/G;version=Hapmap2;RS=rs802055751;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	214291271	214291370	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:206071045;1allele=T/C;version=Hapmap2;RS=rs132283213;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214298272	214298371	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:206078046;1allele=G/A;version=Hapmap2;RS=rs277945506;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	214381178	214381277	.	+	.	Name=Leaf_width;B73v2_pos=5:206160951;1allele=C/T;version=Hapmap2;RS=rs835367117;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214415194	214415293	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:206194967;1allele=/ATGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214424109	214424208	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:206203882;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214630068	214630167	.	+	.	Name=Days_to_silk;B73v2_pos=1:36777594;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214664855	214664954	.	+	.	Name=Protein;B73v2_pos=5:206433717;1allele=C/T;version=Hapmap2;RS=rs1062755613;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	214720863	214720962	.	+	.	Name=Height_above_ear;B73v2_pos=5:206525846;1allele=C/G;version=Hapmap2;RS=rs828062399;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	214774733	214774832	.	+	.	Name=Protein;B73v2_pos=5:206549377;1allele=G/C;version=Hapmap2;RS=rs277945856;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	214778662	214778761	.	+	.	Name=Protein;B73v2_pos=5:206553306;1allele=G/A;version=Hapmap2;RS=rs277945858;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	214779703	214779802	.	+	.	Name=Leaf_length;B73v2_pos=5:206554347;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214779748	214779847	.	+	.	Name=Leaf_width;B73v2_pos=5:206554392;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214780096	214780195	.	+	.	Name=Protein;B73v2_pos=5:206554740;1allele=C/T;version=Hapmap1;RS=rs132283706;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	214780124	214780223	.	+	.	Name=Protein;B73v2_pos=5:206554768;1allele=G/T;version=Hapmap2;RS=rs130190272;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	214784282	214784381	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:206558926;1allele=C/A;version=Hapmap2;RS=rs130190317;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	214787371	214787470	.	+	.	Name=Protein;B73v2_pos=5:206562015;1allele=G/A;version=Hapmap2;RS=rs277945901;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	214795815	214795914	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:206570461;1allele=G/A;version=Hapmap2;RS=rs829027071;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	214824383	214824482	.	+	.	Name=Protein;B73v2_pos=5:206601771;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214824831	214824930	.	+	.	Name=Nitrate;B73v2_pos=5:206601323;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214824831	214824930	.	+	.	Name=Protein;B73v2_pos=5:206601323;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214840096	214840195	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:206727456;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214840096	214840195	.	+	.	Name=Protein;B73v2_pos=5:206727456;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214843759	214843858	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:206723793;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214887582	214887681	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:206679831;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	214977798	214977897	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:206746853;1allele=C/G;version=Hapmap2;RS=rs845754891;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	214978685	214978784	.	+	.	Name=Leaf_width;B73v2_pos=5:206747740;1allele=T/G;version=Hapmap2;RS=rs803680501;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	215024098	215024197	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:206795815;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215024126	215024225	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:206795843;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215024130	215024229	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:206795847;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215024360	215024459	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:206796077;1allele=/TCGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215065319	215065418	.	+	.	Name=Protein;B73v2_pos=5:206837039;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215065387	215065486	.	+	.	Name=Protein;B73v2_pos=5:206837107;1allele=C/T;version=Hapmap2;RS=rs827402883;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	215113180	215113279	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:206884906;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215116843	215116942	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:206888571;1allele=C/T;version=Hapmap2;RS=rs816610489;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215116936	215117035	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:206888664;1allele=T/C;version=Hapmap2;RS=rs822025050;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215117591	215117690	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:206889319;1allele=A/T;version=Hapmap2;RS=rs819660662;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	215120870	215120969	.	+	.	Name=Leaf_width;B73v2_pos=5:206892598;1allele=A/G;version=Hapmap1;RS=rs132284697;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	215121036	215121135	.	+	.	Name=Days_to_silk;B73v2_pos=5:206892764;1allele=G/T;version=Hapmap1;RS=rs130190994;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	215122868	215122967	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:206894597;1allele=G/A;version=Hapmap2;RS=rs277946571;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215150422	215150521	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:206917314;1allele=C/G;version=Hapmap2;RS=rs277946592;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	215153349	215153448	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:206920241;1allele=C/T;version=Hapmap2;RS=rs130191075;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215156103	215156202	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:206923594;1allele=T/-;version=Hapmap1;RS=rs810758495;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	215159466	215159565	.	+	.	Name=Total_amino_acids;B73v2_pos=5:206926957;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215161095	215161194	.	+	.	Name=Glutamate;B73v2_pos=5:206928586;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215205473	215205572	.	+	.	Name=Leaf_width;B73v2_pos=5:206973324;1allele=G/C;version=Hapmap2;RS=rs132285023;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	215205706	215205805	.	+	.	Name=Glutamate;B73v2_pos=5:206973557;1allele=A/C;version=Hapmap1;RS=rs130191199;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	215218095	215218194	.	+	.	Name=Nitrate;B73v2_pos=5:206986374;1allele=C/T;version=Hapmap2;RS=rs803676045;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215218095	215218194	.	+	.	Name=Total_amino_acids;B73v2_pos=5:206986374;1allele=C/T;version=Hapmap2;RS=rs803676045;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215230783	215230882	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:206999518;1allele=C/T;version=Hapmap2;RS=rs836812308;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215230783	215230882	.	+	.	Name=Days_to_silk;B73v2_pos=5:206999518;1allele=C/T;version=Hapmap2;RS=rs836812308;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215252501	215252600	.	+	.	Name=Glutamate;B73v2_pos=5:207021236;1allele=G/A;version=Hapmap2;RS=rs816323301;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215291387	215291486	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207060124;1allele=T/C;version=Hapmap2;RS=rs130191396;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215291387	215291486	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207060124;1allele=T/C;version=Hapmap2;RS=rs130191396;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215301451	215301550	.	+	.	Name=Tassel_length;B73v2_pos=5:207070188;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215307077	215307176	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:207075814;1allele=G/A;version=Hapmap2;RS=rs1062781777;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215351667	215351766	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:207120404;1allele=T/C;version=Hapmap2;RS=rs130191562;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215355141	215355240	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:207123873;1allele=A/G;version=Hapmap2;RS=rs277947033;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215356061	215356160	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207124793;1allele=A/G;version=Hapmap2;RS=rs132285146;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215356626	215356725	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207125358;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215360210	215360309	.	+	.	Name=Leaf_length;B73v2_pos=5:207128942;1allele=C/T;version=Hapmap2;RS=rs1063645370;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215363324	215363423	.	+	.	Name=Glutamate;B73v2_pos=5:207132056;1allele=G/A;version=Hapmap2;RS=rs803293083;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215371984	215372083	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:207140716;1allele=C/G;version=Hapmap2;RS=rs724538558;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	215371985	215372084	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:207140717;1allele=T/C;version=Hapmap2;RS=rs725512293;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215372520	215372619	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:207141252;1allele=C/G;version=Hapmap2;RS=rs822270503;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	215782289	215782388	.	+	.	Name=Nitrate;B73v2_pos=5:207433393;1allele=G/A;version=Hapmap2;RS=rs820795208;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215800554	215800653	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:207451658;1allele=C/T;version=Hapmap2;RS=rs847171883;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	215847401	215847500	.	+	.	Name=Height_above_ear;B73v2_pos=5:207498503;1allele=T/C;version=Hapmap2;RS=rs816931734;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215850264	215850363	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207501366;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215850793	215850892	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207501895;1allele=/CCCGCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215850867	215850966	.	+	.	Name=Protein;B73v2_pos=5:207501969;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215850867	215850966	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207501969;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215856760	215856859	.	+	.	Name=Total_amino_acids;B73v2_pos=5:207507860;1allele=T/C;version=Hapmap2;RS=rs277947164;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215858250	215858349	.	+	.	Name=Protein;B73v2_pos=5:207509350;1allele=G/-;version=Hapmap1;RS=rs132285486;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215862457	215862556	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207513557;1allele=TGAC/;version=Hapmap1;RS=rs815517724;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	215862500	215862599	.	+	.	Name=Glutamate;B73v2_pos=5:207513600;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215862860	215862959	.	+	.	Name=Glutamate;B73v2_pos=5:207513960;1allele=G/T;version=Hapmap1;RS=rs130191846;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	215862940	215863039	.	+	.	Name=Glutamate;B73v2_pos=5:207514040;1allele=C/T;version=Hapmap2;RS=rs130191847;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215862959	215863058	.	+	.	Name=Glutamate;B73v2_pos=5:207514059;1allele=C/T;version=Hapmap2;RS=rs130191849;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215863099	215863198	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207514199;1allele=C/T;version=Hapmap2;RS=rs277947184;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215863099	215863198	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207514199;1allele=C/T;version=Hapmap2;RS=rs277947184;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215863352	215863451	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207514452;1allele=C/T;version=Hapmap2;RS=rs132285571;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	215863444	215863543	.	+	.	Name=Glutamate;B73v2_pos=5:207514544;1allele=A/C;version=Hapmap2;RS=rs277947188;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	215870139	215870238	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207521239;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	215912350	215912449	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207563449;1allele=A/G;version=Hapmap2;RS=rs839480930;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	215913424	215913523	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:207564523;1allele=G/A;version=Hapmap2;RS=rs813326237;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	215913900	215913999	.	+	.	Name=Total_amino_acids;B73v2_pos=5:207564999;1allele=T/A;version=Hapmap2;RS=rs277947245;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	215962803	215962902	.	+	.	Name=Nitrate;B73v2_pos=5:207613902;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216004728	216004827	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:207655827;1allele=G/A;version=Hapmap2;RS=rs132285669;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216008698	216008797	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:207659797;1allele=A/T;version=Hapmap2;RS=rs130191929;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216008698	216008797	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207659797;1allele=A/T;version=Hapmap2;RS=rs130191929;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216008742	216008841	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:207659841;1allele=T/A;version=Hapmap2;RS=rs832163515;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	216008744	216008843	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:207659843;1allele=C/T;version=Hapmap2;RS=rs812481876;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216008748	216008847	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:207659847;1allele=G/A;version=Hapmap2;RS=rs814965288;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216009428	216009527	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:207660527;1allele=G/A;version=Hapmap2;RS=rs132285810;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216013414	216013513	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:207664513;1allele=G/A;version=Hapmap1;RS=rs725022695;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216014909	216015008	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:207666008;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216020479	216020578	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:207671578;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216023141	216023240	.	+	.	Name=Nitrate;B73v2_pos=5:207674240;1allele=C/T;version=Hapmap2;RS=rs848861547;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216026185	216026284	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:207677284;1allele=C/G;version=Hapmap2;RS=rs1063132439;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	216033015	216033114	.	+	.	Name=Nitrate;B73v2_pos=5:207684114;1allele=C/A;version=Hapmap2;RS=rs810643854;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	216059528	216059627	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:207710927;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216075101	216075200	.	+	.	Name=Height_above_ear;B73v2_pos=5:207726500;1allele=G/A;version=Hapmap2;RS=rs828244739;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216103416	216103515	.	+	.	Name=Fructose;B73v2_pos=5:207753604;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216103991	216104090	.	+	.	Name=Nitrate;B73v2_pos=5:207754179;1allele=T/A;version=Hapmap2;RS=rs847751508;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	216104538	216104637	.	+	.	Name=Leaf_width;B73v2_pos=5:207754726;1allele=A/G;version=Hapmap2;RS=rs130192236;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216108271	216108370	.	+	.	Name=Nitrate;B73v2_pos=5:207758459;1allele=G/T;version=Hapmap2;RS=rs820572357;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216189914	216190013	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:207831846;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216242618	216242717	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:207887430;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216243867	216243966	.	+	.	Name=Leaf_width;B73v2_pos=5:207888679;1allele=G/T;version=Hapmap2;RS=rs725176640;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216248128	216248227	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:207892856;1allele=A/G;version=Hapmap2;RS=rs724600761;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216248474	216248573	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:207893202;1allele=C/T;version=Hapmap1;RS=rs132285945;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216248604	216248703	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:207893332;1allele=G/C;version=Hapmap1;RS=rs132285956;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	216249127	216249226	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:207893855;1allele=A/C;version=Hapmap2;RS=rs727197813;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	216250915	216251014	.	+	.	Name=Height_above_ear;B73v2_pos=5:207895643;1allele=G/A;version=Hapmap2;RS=rs130192379;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216251509	216251608	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:207896237;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216252344	216252443	.	+	.	Name=Nitrate;B73v2_pos=5:207897072;1allele=T/A;version=Hapmap1;RS=rs132285991;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	216253533	216253632	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:207898261;1allele=G/A;version=Hapmap2;RS=rs130192400;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216253668	216253767	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:207898396;1allele=A/T;version=Hapmap2;RS=rs130192401;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216254361	216254460	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:207899089;1allele=C/T;version=Hapmap2;RS=rs821145836;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216254574	216254673	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:207899302;1allele=A/G;version=Hapmap1;RS=rs132286020;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216254574	216254673	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:207899302;1allele=A/G;version=Hapmap1;RS=rs132286020;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216258677	216258776	.	+	.	Name=Height_above_ear;B73v2_pos=5:207903406;1allele=C/T;version=Hapmap2;RS=rs829339183;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216325934	216326033	.	+	.	Name=Nitrate;B73v2_pos=5:207993105;1allele=A/G;version=Hapmap2;RS=rs812636619;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216326145	216326244	.	+	.	Name=Ear_height;B73v2_pos=5:207993316;1allele=G/A;version=Hapmap2;RS=rs132286072;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216366263	216366362	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:208059180;1allele=T/C;version=Hapmap2;RS=rs843609474;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216366318	216366417	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208059235;1allele=C/T;version=Hapmap2;RS=rs825897547;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216370845	216370944	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208063762;1allele=G/A;version=Hapmap2;RS=rs277947747;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216370944	216371043	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208063861;1allele=A/T;version=Hapmap2;RS=rs277947749;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216371004	216371103	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208063921;1allele=G/A;version=Hapmap2;RS=rs277947751;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216371058	216371157	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208063975;1allele=A/G;version=Hapmap2;RS=rs130192676;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216371712	216371811	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208064629;1allele=T/C;version=Hapmap2;RS=rs277947757;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216372759	216372858	.	+	.	Name=Nitrate;B73v2_pos=5:208065676;1allele=A/G;version=Hapmap2;RS=rs727446698;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216377289	216377388	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208070206;1allele=T/C;version=Hapmap2;RS=rs130192695;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216381601	216381700	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208074516;1allele=-/+;version=Hapmap2;RS=rs821713351;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216386408	216386507	.	+	.	Name=Fructose;B73v2_pos=5:208079323;1allele=G/T;version=Hapmap2;RS=rs805401872;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216386408	216386507	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208079323;1allele=G/T;version=Hapmap2;RS=rs805401872;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216391452	216391551	.	+	.	Name=Chlorophyll_B;B73v2_pos=5:208084367;1allele=C/T;version=Hapmap2;RS=rs810917993;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216399247	216399346	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208092162;1allele=C/T;version=Hapmap2;RS=rs130192796;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216399685	216399784	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208092600;1allele=A/T;version=Hapmap1;RS=rs277947869;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216400953	216401052	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208093868;1allele=C/T;version=Hapmap2;RS=rs130192799;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216401700	216401799	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:208094615;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216402823	216402922	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208095738;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216402920	216403019	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208095835;1allele=G/A;version=Hapmap2;RS=rs132286632;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216410768	216410867	.	+	.	Name=Leaf_width;B73v2_pos=5:208103683;1allele=G/T;version=Hapmap2;RS=rs801881269;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216412049	216412148	.	+	.	Name=Nitrate;B73v2_pos=5:208104964;1allele=G/T;version=Hapmap2;RS=rs818277258;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	216437803	216437902	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:208130718;1allele=C/T;version=Hapmap2;RS=rs834592401;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216451143	216451242	.	+	.	Name=Cob_diameter;B73v2_pos=5:208144058;1allele=C/T;version=Hapmap2;RS=rs839183441;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216466085	216466184	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:208159000;1allele=C/T;version=Hapmap1;RS=rs132286808;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216467177	216467276	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:208160092;1allele=A/G;version=Hapmap2;RS=rs820100106;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216468031	216468130	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:208160946;1allele=A/G;version=Hapmap2;RS=rs840840187;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216472171	216472270	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:208165086;1allele=/TC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216473299	216473398	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:208166214;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216474597	216474696	.	+	.	Name=Height_above_ear;B73v2_pos=5:208167512;1allele=T/C;version=Hapmap1;RS=rs132286979;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216474835	216474934	.	+	.	Name=Nitrate;B73v2_pos=5:208167750;1allele=G/T;version=Hapmap2;RS=rs803336268;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216474929	216475028	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208167844;1allele=A/C;version=Hapmap2;RS=rs816508114;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	216479037	216479136	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208171952;1allele=G/C;version=Hapmap1;RS=rs132287061;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216482534	216482633	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208175449;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216482557	216482656	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:208175472;1allele=G/A;version=Hapmap2;RS=rs814831184;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	216484024	216484123	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208176939;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216484623	216484722	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:208177538;1allele=/GATC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216484824	216484923	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208177739;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216485152	216485251	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208178067;1allele=C/T;version=Hapmap2;RS=rs815049826;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216513922	216514021	.	+	.	Name=Days_to_silk;B73v2_pos=5:208181258;1allele=T/C;version=Hapmap2;RS=rs850489873;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216514752	216514851	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:208182088;1allele=G/A;version=Hapmap2;RS=rs130193364;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216515264	216515363	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208182600;1allele=A/G;version=Hapmap2;RS=rs130193380;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216515300	216515399	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208182636;1allele=A/T;version=Hapmap2;RS=rs130193381;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216526303	216526402	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208279111;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216526886	216526985	.	+	.	Name=Days_to_silk;B73v2_pos=5:208278528;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216526886	216526985	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:208278528;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216527816	216527915	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:208277598;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216528032	216528131	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208277382;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216528392	216528491	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208277022;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216531324	216531423	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:208274090;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216533564	216533663	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:208271850;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216534356	216534455	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208271058;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216538172	216538271	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208267233;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216538860	216538959	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:208266545;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216539326	216539425	.	+	.	Name=Height_above_ear;B73v2_pos=5:208266079;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216541008	216541107	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208264397;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216546033	216546132	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:208259372;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216548129	216548228	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208257276;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216550440	216550539	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:208254965;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216602576	216602675	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:208196148;1allele=+/-;version=Hapmap2;RS=rs815621990;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	216602632	216602731	.	+	.	Name=Nitrate;B73v2_pos=5:208196092;1allele=G/A;version=Hapmap2;RS=rs849435362;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	216603168	216603267	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208195556;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216638136	216638235	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208303951;1allele=C/A;version=Hapmap2;RS=rs840000504;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	216641556	216641655	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208307371;1allele=C/T;version=Hapmap2;RS=rs821858016;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216680472	216680571	.	+	.	Name=Height_above_ear;B73v2_pos=5:208344302;1allele=C/T;version=Hapmap2;RS=rs849123563;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216687102	216687201	.	+	.	Name=Height_above_ear;B73v2_pos=5:208350939;1allele=/ATTG;version=Hapmap1;RS=rs132288331;2ref_allele=C;3alt_allele=CCG
chr5	Wallace_2014	SNP	216689866	216689965	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:208353703;1allele=G/T;version=Hapmap2;RS=rs130194059;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	216692707	216692806	.	+	.	Name=Nitrate;B73v2_pos=5:208356544;1allele=T/A;version=Hapmap2;RS=rs277948358;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216693442	216693541	.	+	.	Name=Nitrate;B73v2_pos=5:208357279;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216693771	216693870	.	+	.	Name=Plant_height;B73v2_pos=5:208357608;1allele=C/T;version=Hapmap2;RS=rs833075715;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216694154	216694253	.	+	.	Name=Height_above_ear;B73v2_pos=5:208357991;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216694164	216694263	.	+	.	Name=Days_to_silk;B73v2_pos=5:208358001;1allele=C/T;version=Hapmap2;RS=rs835860204;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216694211	216694310	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:208358048;1allele=C/G;version=Hapmap2;RS=rs839649247;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	216694211	216694310	.	+	.	Name=Days_to_silk;B73v2_pos=5:208358048;1allele=C/G;version=Hapmap2;RS=rs839649247;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	216698030	216698129	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208361867;1allele=T/C;version=Hapmap2;RS=rs824442631;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216702303	216702402	.	+	.	Name=Glutamate;B73v2_pos=5:208366140;1allele=C/T;version=Hapmap2;RS=rs277948403;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216703539	216703638	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208367376;1allele=A/G;version=Hapmap2;RS=rs130193995;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216704222	216704321	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:208368059;1allele=T/C;version=Hapmap2;RS=rs803284984;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216711326	216711425	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:208375163;1allele=C/T;version=Hapmap2;RS=rs130193919;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216723727	216723826	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208388314;1allele=T/C;version=Hapmap2;RS=rs809576125;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216723897	216723996	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208388484;1allele=A/T;version=Hapmap2;RS=rs848807029;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	216724001	216724100	.	+	.	Name=Glutamate;B73v2_pos=5:208388588;1allele=T/A;version=Hapmap2;RS=rs843388175;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	216724154	216724253	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208388741;1allele=C/T;version=Hapmap2;RS=rs812752564;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216724747	216724846	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208389334;1allele=T/C;version=Hapmap2;RS=rs836029549;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216724904	216725003	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208389491;1allele=A/T;version=Hapmap2;RS=rs830413586;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216725762	216725861	.	+	.	Name=Glutamate;B73v2_pos=5:208390349;1allele=C/T;version=Hapmap2;RS=rs813126506;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216726780	216726879	.	+	.	Name=Tassel_length;B73v2_pos=5:208391367;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216754666	216754765	.	+	.	Name=Plant_height;B73v2_pos=5:208419694;1allele=C/G;version=Hapmap2;RS=rs807351950;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	216755018	216755117	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:208420046;1allele=A/G;version=Hapmap2;RS=rs832219484;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216755031	216755130	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:208420059;1allele=C/T;version=Hapmap2;RS=rs844449495;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216764462	216764561	.	+	.	Name=Tassel_length;B73v2_pos=5:208434167;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216765546	216765645	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208433083;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216766300	216766399	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208432329;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216767965	216768064	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208430664;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216768366	216768465	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208430263;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216768918	216769017	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208429711;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216770900	216770999	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208427729;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216831364	216831463	.	+	.	Name=Days_to_silk;B73v2_pos=5:208468485;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216834766	216834865	.	+	.	Name=Nitrate;B73v2_pos=5:208465082;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216887798	216887897	.	+	.	Name=Glutamate;B73v2_pos=5:208549934;1allele=A/T;version=Hapmap2;RS=rs132288370;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	216888079	216888178	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208550215;1allele=T/C;version=Hapmap2;RS=rs848939643;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216889879	216889978	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208552016;1allele=+/-;version=Hapmap2;RS=rs132288374;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216890694	216890793	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208552831;1allele=C/T;version=Hapmap2;RS=rs809560948;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	216891040	216891139	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:208553177;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216893457	216893556	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208555594;1allele=C/A;version=Hapmap1;RS=rs132288422;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	216893457	216893556	.	+	.	Name=Starch;B73v2_pos=5:208555594;1allele=C/A;version=Hapmap1;RS=rs132288422;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	216893673	216893772	.	+	.	Name=Fructose;B73v2_pos=5:208555810;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216893732	216893831	.	+	.	Name=Fructose;B73v2_pos=5:208555869;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216894677	216894776	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208556814;1allele=A/C;version=Hapmap2;RS=rs818788966;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	216894677	216894776	.	+	.	Name=Fructose;B73v2_pos=5:208556814;1allele=A/C;version=Hapmap2;RS=rs818788966;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	216894757	216894856	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208556894;1allele=G/C;version=Hapmap1;RS=rs132288439;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	216899058	216899157	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208561195;1allele=C/A;version=Hapmap2;RS=rs130194187;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	216899208	216899307	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208561345;1allele=T/C;version=Hapmap2;RS=rs813044457;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216901527	216901626	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:208563664;1allele=G/A;version=Hapmap2;RS=rs277948716;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216902983	216903082	.	+	.	Name=Height_above_ear;B73v2_pos=5:208565120;1allele=G/C;version=Hapmap2;RS=rs130194229;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	216904259	216904358	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208566396;1allele=T/G;version=Hapmap2;RS=rs277948736;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	216982857	216982956	.	+	.	Name=Glutamate;B73v2_pos=5:208636394;1allele=G/A;version=Hapmap1;RS=rs725221265;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	216984193	216984292	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:208637730;1allele=A/G;version=Hapmap1;RS=rs132288639;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216984628	216984727	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208638165;1allele=/CTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	216988486	216988585	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208642023;1allele=A/G;version=Hapmap2;RS=rs132288740;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216990431	216990530	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208643968;1allele=A/G;version=Hapmap2;RS=rs801505599;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	216990678	216990777	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208644215;1allele=T/C;version=Hapmap1;RS=rs132288751;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	216992126	216992225	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:208645663;1allele=C/A;version=Hapmap2;RS=rs132288785;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	217018354	217018453	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:208672801;1allele=A/C;version=Hapmap2;RS=rs814766926;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	217018693	217018792	.	+	.	Name=Leaf_width;B73v2_pos=5:208673140;1allele=C/T;version=Hapmap1;RS=rs837962569;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	217021351	217021450	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:208675798;1allele=C/G;version=Hapmap2;RS=rs826025368;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	217026850	217026949	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:208681297;1allele=A/T;version=Hapmap2;RS=rs806363715;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	217027051	217027150	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208681498;1allele=G/T;version=Hapmap2;RS=rs130194286;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	217027051	217027150	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208681498;1allele=G/T;version=Hapmap2;RS=rs130194286;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	217027845	217027944	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:208682292;1allele=/GATGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	217028738	217028837	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:208683185;1allele=G/T;version=Hapmap1;RS=rs132288912;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	217084453	217084552	.	+	.	Name=Nitrate;B73v2_pos=5:208840154;1allele=G/A;version=Hapmap2;RS=rs801710028;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	217105711	217105810	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208740952;1allele=T/-;version=Hapmap1;RS=rs132288922;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217121302	217121401	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208756541;1allele=T/C;version=Hapmap2;RS=rs801511836;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217135822	217135921	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208771061;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	217146802	217146901	.	+	.	Name=Nitrate;B73v2_pos=5:208783292;1allele=C/T;version=Hapmap2;RS=rs820236657;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	217164426	217164525	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:208792983;1allele=A/G;version=Hapmap2;RS=rs277948828;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	217165301	217165400	.	+	.	Name=Nitrate;B73v2_pos=5:208793858;1allele=G/T;version=Hapmap2;RS=rs824975012;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	217230862	217230961	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208889580;1allele=T/C;version=Hapmap2;RS=rs812074321;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217234365	217234464	.	+	.	Name=Height_above_ear;B73v2_pos=5:208893083;1allele=G/T;version=Hapmap2;RS=rs823258159;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	217234648	217234747	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208893366;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	217237709	217237808	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208896427;1allele=T/C;version=Hapmap2;RS=rs277948875;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	217239767	217239866	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208898471;1allele=T/C;version=Hapmap1;RS=rs132289195;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217240381	217240480	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208899085;1allele=T/A;version=Hapmap1;RS=rs132289209;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	217240770	217240869	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:208899474;1allele=G/C;version=Hapmap2;RS=rs130194385;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	217242246	217242345	.	+	.	Name=Total_amino_acids;B73v2_pos=5:208900950;1allele=T/A;version=Hapmap1;RS=rs132289272;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	217272705	217272804	.	+	.	Name=Height_above_ear;B73v2_pos=5:208931099;1allele=G/A;version=Hapmap2;RS=rs849584162;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	217298529	217298628	.	+	.	Name=Days_to_silk;B73v2_pos=5:208956933;1allele=A/T;version=Hapmap2;RS=rs834410560;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	217302101	217302200	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:208960505;1allele=G/T;version=Hapmap2;RS=rs277948955;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	217302101	217302200	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208960505;1allele=G/T;version=Hapmap2;RS=rs277948955;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	217304936	217305035	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:208963340;1allele=C/T;version=Hapmap2;RS=rs130194520;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	217323254	217323353	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:208981966;1allele=G/C;version=Hapmap2;RS=rs824172726;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	217325263	217325362	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:208983975;1allele=C/T;version=Hapmap2;RS=rs844639775;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	217327896	217327995	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:208986608;1allele=G/A;version=Hapmap2;RS=rs277949032;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	217328562	217328661	.	+	.	Name=Glutamate;B73v2_pos=5:208987274;1allele=T/C;version=Hapmap2;RS=rs132289539;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217337034	217337133	.	+	.	Name=Nitrate;B73v2_pos=5:208995746;1allele=A/G;version=Hapmap2;RS=rs816085999;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	217337035	217337134	.	+	.	Name=Nitrate;B73v2_pos=5:208995747;1allele=G/C;version=Hapmap2;RS=rs845749687;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	217341484	217341583	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:209000196;1allele=G/A;version=Hapmap1;RS=rs869655639;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	217342008	217342107	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:209000720;1allele=C/A;version=Hapmap2;RS=rs833618159;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	217342770	217342869	.	+	.	Name=Leaf_width;B73v2_pos=5:209001482;1allele=C/G;version=Hapmap2;RS=rs843676418;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	217342771	217342870	.	+	.	Name=Leaf_width;B73v2_pos=5:209001483;1allele=T/C;version=Hapmap2;RS=rs130194676;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217342894	217342993	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:209001606;1allele=T/C;version=Hapmap2;RS=rs809169804;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217437996	217438095	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:209091217;1allele=C/T;version=Hapmap2;RS=rs130194726;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217494692	217494791	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:209150910;1allele=C/T;version=Hapmap2;RS=rs277949144;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217570866	217570965	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:209237007;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	217580796	217580895	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:209246937;1allele=T/A;version=Hapmap2;RS=rs844870267;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	217627827	217627926	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:209184671;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	217639836	217639935	.	+	.	Name=Nitrate;B73v2_pos=5:209299233;1allele=G/A;version=Hapmap2;RS=rs806137469;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	217645253	217645352	.	+	.	Name=Days_to_silk;B73v2_pos=5:209303353;1allele=G/A;version=Hapmap2;RS=rs829233712;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	217649996	217650095	.	+	.	Name=Nitrate;B73v2_pos=5:209308098;1allele=T/G;version=Hapmap2;RS=rs828339244;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	217752200	217752299	.	+	.	Name=Days_to_silk;B73v2_pos=5:209425527;1allele=G/A;version=Hapmap2;RS=rs819183479;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	217825675	217825774	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:209466816;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	217886028	217886127	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:209523164;1allele=A/T;version=Hapmap2;RS=rs132290017;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	217886273	217886372	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:209523410;1allele=T/C;version=Hapmap2;RS=rs1062645074;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	217887308	217887407	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:209524445;1allele=C/G;version=Hapmap2;RS=rs810747730;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	217892747	217892846	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:209529891;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	217937281	217937380	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:209566847;1allele=A/T;version=Hapmap2;RS=rs835545310;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	218014214	218014313	.	+	.	Name=Height_above_ear;B73v2_pos=5:209777434;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218042064	218042163	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:209669675;1allele=G/A;version=Hapmap2;RS=rs814414695;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	218052373	218052472	.	+	.	Name=Total_amino_acids;B73v2_pos=5:209685215;1allele=G/A;version=Hapmap2;RS=rs277949515;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	218055630	218055729	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:209688472;1allele=C/T;version=Hapmap2;RS=rs727022717;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	218060398	218060497	.	+	.	Name=Fructose;B73v2_pos=5:209693240;1allele=AGG/;version=Hapmap1;RS=rs840910841;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	218083698	218083797	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:209716539;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218083704	218083803	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:209716545;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218083805	218083904	.	+	.	Name=Fructose;B73v2_pos=5:209716646;1allele=G/T;version=Hapmap1;RS=rs277949612;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	218083868	218083967	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:209716709;1allele=/AGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218085193	218085292	.	+	.	Name=Nitrate;B73v2_pos=5:209718034;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218085571	218085670	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:209718412;1allele=G/A;version=Hapmap2;RS=rs840259373;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	218093291	218093390	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:209726132;1allele=AGCT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218104999	218105098	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:209731144;1allele=G/T;version=Hapmap2;RS=rs1062419004;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	218105525	218105624	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:209731670;1allele=C/T;version=Hapmap2;RS=rs130195252;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218111970	218112069	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:209738113;1allele=G/A;version=Hapmap2;RS=rs834697071;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	218115547	218115646	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:209741541;1allele=C/A;version=Hapmap2;RS=rs1062180628;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	218124276	218124375	.	+	.	Name=Glucose;B73v2_pos=5:209749336;1allele=G/A;version=Hapmap2;RS=rs277949740;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	218126776	218126875	.	+	.	Name=Height_above_ear;B73v2_pos=5:209751836;1allele=T/C;version=Hapmap2;RS=rs724353826;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218126811	218126910	.	+	.	Name=Height_above_ear;B73v2_pos=5:209751871;1allele=T/C;version=Hapmap2;RS=rs724505318;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218134572	218134671	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:209759633;1allele=A/G;version=Hapmap2;RS=rs813518372;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	218204249	218204348	.	+	.	Name=Days_to_silk;B73v2_pos=5:209837213;1allele=T/G;version=Hapmap2;RS=rs819098062;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	218204927	218205026	.	+	.	Name=Height_above_ear;B73v2_pos=5:209837891;1allele=G/A;version=Hapmap2;RS=rs829149763;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	218232990	218233089	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:209866856;1allele=T/C;version=Hapmap2;RS=rs840627346;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218236951	218237050	.	+	.	Name=Nitrate;B73v2_pos=5:209870817;1allele=G/A;version=Hapmap2;RS=rs277949857;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	218236970	218237069	.	+	.	Name=Nitrate;B73v2_pos=5:209870836;1allele=C/T;version=Hapmap2;RS=rs130195853;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218239859	218239958	.	+	.	Name=Nitrate;B73v2_pos=5:209873725;1allele=A/C;version=Hapmap2;RS=rs277949882;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	218241130	218241229	.	+	.	Name=Nitrate;B73v2_pos=5:209874996;1allele=A/G;version=Hapmap2;RS=rs828600611;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	218262460	218262559	.	+	.	Name=Starch;B73v2_pos=5:209896349;1allele=C/T;version=Hapmap2;RS=rs812116402;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	218264217	218264316	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:209898106;1allele=G/A;version=Hapmap2;RS=rs277949941;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	218276838	218276937	.	+	.	Name=Starch;B73v2_pos=5:209910186;1allele=A/G;version=Hapmap2;RS=rs132290719;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	218276892	218276991	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:209910240;1allele=T/C;version=Hapmap2;RS=rs130195896;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218301083	218301182	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:209933913;1allele=T/C;version=Hapmap1;RS=rs132290736;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218304832	218304931	.	+	.	Name=Fructose;B73v2_pos=5:209937662;1allele=C/T;version=Hapmap2;RS=rs834737062;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	218431116	218431215	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:210060530;1allele=T/C;version=Hapmap2;RS=rs841575516;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	218465662	218465761	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:210095046;1allele=A/G;version=Hapmap2;RS=rs829455536;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	218600612	218600711	.	+	.	Name=Height_above_ear;B73v2_pos=5:210203276;1allele=T/A;version=Hapmap2;RS=rs842355860;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	218675671	218675770	.	+	.	Name=Fructose;B73v2_pos=5:210286636;1allele=G/T;version=Hapmap2;RS=rs806858271;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	218695907	218696006	.	+	.	Name=Height_above_ear;B73v2_pos=5:210306493;1allele=A/T;version=Hapmap2;RS=rs130196267;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	218724824	218724923	.	+	.	Name=Height_above_ear;B73v2_pos=5:210335413;1allele=T/C;version=Hapmap2;RS=rs130196282;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	218838218	218838317	.	+	.	Name=Fructose;B73v2_pos=5:210448391;1allele=T/C;version=Hapmap2;RS=rs277950438;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	218862533	218862632	.	+	.	Name=Height_above_ear;B73v2_pos=5:210597784;1allele=C/A;version=Hapmap2;RS=rs834739033;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	218863211	218863310	.	+	.	Name=Nitrate;B73v2_pos=5:210597106;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218868126	218868225	.	+	.	Name=Fructose;B73v2_pos=5:210592495;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218871856	218871955	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:210588765;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218947380	218947479	.	+	.	Name=Fructose;B73v2_pos=5:210513414;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218959237	218959336	.	+	.	Name=Starch;B73v2_pos=5:210501550;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218965318	218965417	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:210495809;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218981803	218981902	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:210479324;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218984487	218984586	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:210476343;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218988071	218988170	.	+	.	Name=Height_above_ear;B73v2_pos=5:210472759;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	218989441	218989540	.	+	.	Name=Ear_row_number;B73v2_pos=5:210471389;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	219032692	219032791	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:210643650;1allele=C/T;version=Hapmap2;RS=rs814065950;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	219034118	219034217	.	+	.	Name=Ear_row_number;B73v2_pos=5:210645076;1allele=G/A;version=Hapmap2;RS=rs816131526;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	219119759	219119858	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:210725214;1allele=A/T;version=Hapmap2;RS=rs828853579;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	219132987	219133086	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:210738181;1allele=/CGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	219135101	219135200	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:210740295;1allele=A/G;version=Hapmap2;RS=rs277951294;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	219135328	219135427	.	+	.	Name=Ear_row_number;B73v2_pos=5:210740522;1allele=T/A;version=Hapmap2;RS=rs277951299;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	219142289	219142388	.	+	.	Name=Ear_row_number;B73v2_pos=5:210747494;1allele=A/T;version=Hapmap1;RS=rs132292247;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	219171726	219171825	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:210777068;1allele=A/C;version=Hapmap2;RS=rs132292569;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	219186143	219186242	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:210791484;1allele=T/C;version=Hapmap2;RS=rs802162673;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	219278360	219278459	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:210856571;1allele=C/T;version=Hapmap2;RS=rs801553413;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	219283638	219283737	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:210861850;1allele=C/T;version=Hapmap2;RS=rs807042908;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	219287191	219287290	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:210865403;1allele=G/C;version=Hapmap2;RS=rs848460122;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	219316337	219316436	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:210894547;1allele=A/T;version=Hapmap2;RS=rs838453589;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	219466456	219466555	.	+	.	Name=Height_above_ear;B73v2_pos=5:211116812;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	219502836	219502935	.	+	.	Name=Leaf_width;B73v2_pos=5:211071101;1allele=C/G;version=Hapmap2;RS=rs277951739;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	219601006	219601105	.	+	.	Name=Leaf_width;B73v2_pos=5:211205287;1allele=G/T;version=Hapmap2;RS=rs277952123;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	219721835	219721934	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:211322255;1allele=T/C;version=Hapmap2;RS=rs803379164;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	219829749	219829848	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:211449116;1allele=G/C;version=Hapmap2;RS=rs726175931;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	219834310	219834409	.	+	.	Name=Leaf_width;B73v2_pos=5:211453677;1allele=T/C;version=Hapmap2;RS=rs809342746;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	219890189	219890288	.	+	.	Name=Leaf_width;B73v2_pos=5:211512151;1allele=G/C;version=Hapmap2;RS=rs808518515;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	219890831	219890930	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:211512793;1allele=G/A;version=Hapmap2;RS=rs277952843;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	219895901	219896000	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:211517863;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	219912397	219912496	.	+	.	Name=Leaf_width;B73v2_pos=5:211534344;1allele=G/C;version=Hapmap2;RS=rs277952946;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	219917109	219917208	.	+	.	Name=Total_amino_acids;B73v2_pos=5:211539056;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	219931241	219931340	.	+	.	Name=Leaf_width;B73v2_pos=5:211553193;1allele=T/A;version=Hapmap2;RS=rs829779051;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	219936144	219936243	.	+	.	Name=Leaf_width;B73v2_pos=5:211558096;1allele=C/T;version=Hapmap2;RS=rs277953029;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	219979467	219979566	.	+	.	Name=Leaf_width;B73v2_pos=5:211604809;1allele=C/T;version=Hapmap1;RS=rs132294224;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	219986073	219986172	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:211611415;1allele=C/G;version=Hapmap2;RS=rs817266856;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	220080144	220080243	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:211721252;1allele=T/A;version=Hapmap2;RS=rs843955147;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	220083160	220083259	.	+	.	Name=Cob_diameter;B73v2_pos=5:211724268;1allele=G/A;version=Hapmap1;RS=rs132294491;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	220172969	220173068	.	+	.	Name=Tassel_length;B73v2_pos=5:211795553;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	220351404	220351503	.	+	.	Name=Total_amino_acids;B73v2_pos=5:211978161;1allele=A/C;version=Hapmap2;RS=rs277953947;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	220351724	220351823	.	+	.	Name=Total_amino_acids;B73v2_pos=5:211978481;1allele=C/T;version=Hapmap2;RS=rs846821142;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	220352060	220352159	.	+	.	Name=Total_amino_acids;B73v2_pos=5:211978817;1allele=G/A;version=Hapmap2;RS=rs130199101;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	220352799	220352898	.	+	.	Name=Total_amino_acids;B73v2_pos=5:211979556;1allele=C/A;version=Hapmap2;RS=rs844852712;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	220376522	220376621	.	+	.	Name=Total_amino_acids;B73v2_pos=5:212003362;1allele=G/T;version=Hapmap2;RS=rs132295082;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	220406132	220406231	.	+	.	Name=Tassel_length;B73v2_pos=5:212026162;1allele=C/T;version=Hapmap2;RS=rs810663102;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	220407774	220407873	.	+	.	Name=Tassel_length;B73v2_pos=5:212027804;1allele=G/A;version=Hapmap1;RS=rs130199162;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	220409097	220409196	.	+	.	Name=Tassel_length;B73v2_pos=5:212029127;1allele=G/A;version=Hapmap2;RS=rs130199167;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	220409685	220409784	.	+	.	Name=Tassel_length;B73v2_pos=5:212029715;1allele=C/A;version=Hapmap1;RS=rs809497091;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	220572764	220572863	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:212188781;1allele=A/T;version=Hapmap2;RS=rs804737109;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	220588416	220588515	.	+	.	Name=Height_above_ear;B73v2_pos=5:212204434;1allele=C/G;version=Hapmap1;RS=rs132295612;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	220591585	220591684	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:212207603;1allele=T/A;version=Hapmap2;RS=rs727336513;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	220604928	220605027	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:212220954;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	220614391	220614490	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=5:212230417;1allele=C/G;version=Hapmap2;RS=rs130199901;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	220623616	220623715	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:212239537;1allele=G/A;version=Hapmap2;RS=rs823310939;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	220628207	220628306	.	+	.	Name=Glutamate;B73v2_pos=5:212244128;1allele=C/T;version=Hapmap2;RS=rs277954791;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	220689175	220689274	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:212291289;1allele=G/A;version=Hapmap2;RS=rs814140893;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	220751117	220751216	.	+	.	Name=Ear_row_number;B73v2_pos=5:212351722;1allele=G/C;version=Hapmap2;RS=rs277954944;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	220751304	220751403	.	+	.	Name=Ear_row_number;B73v2_pos=5:212351909;1allele=-/+;version=Hapmap2;RS=rs823789109;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	220751473	220751572	.	+	.	Name=Ear_row_number;B73v2_pos=5:212352078;1allele=C/T;version=Hapmap2;RS=rs835121831;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	220872583	220872682	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:212498315;1allele=G/A;version=Hapmap2;RS=rs828415811;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	220875488	220875587	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:212501220;1allele=G/A;version=Hapmap2;RS=rs132296014;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	220880501	220880600	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:212506233;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	220893478	220893577	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:212519214;1allele=A/G;version=Hapmap2;RS=rs819494778;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	220895376	220895475	.	+	.	Name=Ear_row_number;B73v2_pos=5:212521113;1allele=A/G;version=Hapmap2;RS=rs806259216;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	220900773	220900872	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:212526510;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	220916764	220916863	.	+	.	Name=Height_above_ear;B73v2_pos=5:212542507;1allele=G/A;version=Hapmap1;RS=rs825112598;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	221022502	221022601	.	+	.	Name=Height_above_ear;B73v2_pos=5:212648175;1allele=T/A;version=Hapmap2;RS=rs130200876;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	221026384	221026483	.	+	.	Name=Leaf_width;B73v2_pos=5:212652057;1allele=G/A;version=Hapmap2;RS=rs277955540;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	221031901	221032000	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:212657191;1allele=T/C;version=Hapmap2;RS=rs843478668;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221051654	221051753	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:212680333;1allele=C/T;version=Hapmap2;RS=rs132296531;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221055489	221055588	.	+	.	Name=Leaf_width;B73v2_pos=5:212684168;1allele=T/C;version=Hapmap2;RS=rs130200961;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221093958	221094057	.	+	.	Name=Tassel_length;B73v2_pos=5:212720188;1allele=T/C;version=Hapmap2;RS=rs837497494;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221117325	221117424	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:212743558;1allele=C/T;version=Hapmap2;RS=rs130201053;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221117771	221117870	.	+	.	Name=Plant_height;B73v2_pos=5:212744004;1allele=C/A;version=Hapmap2;RS=rs832471973;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	221123632	221123731	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=5:212749865;1allele=A/G;version=Hapmap2;RS=rs1062136671;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	221244971	221245070	.	+	.	Name=Ear_height;B73v2_pos=5:212864276;1allele=G/C;version=Hapmap2;RS=rs132297061;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	221245007	221245106	.	+	.	Name=Ear_height;B73v2_pos=5:212864312;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221245043	221245142	.	+	.	Name=Leaf_width;B73v2_pos=5:212864348;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221247722	221247821	.	+	.	Name=Ear_row_number;B73v2_pos=5:212867026;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221247859	221247958	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:212867163;1allele=G/T;version=Hapmap2;RS=rs130201295;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	221250455	221250554	.	+	.	Name=Ear_row_number;B73v2_pos=5:212869759;1allele=T/C;version=Hapmap2;RS=rs811168140;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221252434	221252533	.	+	.	Name=Height_above_ear;B73v2_pos=5:212871738;1allele=C/G;version=Hapmap2;RS=rs130201336;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	221253814	221253913	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:212873118;1allele=C/G;version=Hapmap1;RS=rs132297162;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	221254582	221254681	.	+	.	Name=Malate;B73v2_pos=5:212873886;1allele=T/G;version=Hapmap1;RS=rs132297175;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	221261927	221262026	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:212881564;1allele=C/T;version=Hapmap2;RS=rs818295311;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221313206	221313305	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:212935594;1allele=C/T;version=Hapmap2;RS=rs843833352;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221314955	221315054	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:212937343;1allele=C/T;version=Hapmap2;RS=rs831011139;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221400844	221400943	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:213031280;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221407731	221407830	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:213038167;1allele=C/T;version=Hapmap2;RS=rs804209234;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221408019	221408118	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:213038455;1allele=A/G;version=Hapmap1;RS=rs805292584;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	221409306	221409405	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:213039742;1allele=A/C;version=Hapmap2;RS=rs802598659;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	221418946	221419045	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:213049382;1allele=A/T;version=Hapmap2;RS=rs813480620;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	221419117	221419216	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:213049553;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221421998	221422097	.	+	.	Name=Leaf_length;B73v2_pos=5:213052434;1allele=G/C;version=Hapmap1;RS=rs130201616;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	221426031	221426130	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:213056467;1allele=G/T;version=Hapmap1;RS=rs132297594;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	221428567	221428666	.	+	.	Name=Ear_row_number;B73v2_pos=5:213059003;1allele=C/T;version=Hapmap2;RS=rs132297634;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221430059	221430158	.	+	.	Name=Ear_row_number;B73v2_pos=5:213060495;1allele=T/C;version=Hapmap2;RS=rs833510964;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221431314	221431413	.	+	.	Name=Tassel_length;B73v2_pos=5:213061750;1allele=G/T;version=Hapmap2;RS=rs849283871;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	221444336	221444435	.	+	.	Name=Tassel_length;B73v2_pos=5:213074772;1allele=G/A;version=Hapmap2;RS=rs825473852;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	221444336	221444435	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:213074772;1allele=G/A;version=Hapmap2;RS=rs825473852;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	221447819	221447918	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:213078255;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221449831	221449930	.	+	.	Name=Glutamate;B73v2_pos=5:213080267;1allele=T/C;version=Hapmap2;RS=rs1061637783;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221450297	221450396	.	+	.	Name=Ear_row_number;B73v2_pos=5:213080733;1allele=C/A;version=Hapmap2;RS=rs132297794;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	221450530	221450629	.	+	.	Name=Plant_height;B73v2_pos=5:213080966;1allele=GCTCT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221451174	221451273	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:213081610;1allele=C/A;version=Hapmap2;RS=rs821796603;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	221451175	221451274	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:213081611;1allele=A/T;version=Hapmap2;RS=rs277956433;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	221474183	221474282	.	+	.	Name=Malate;B73v2_pos=5:213103921;1allele=C/T;version=Hapmap2;RS=rs842048615;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221474933	221475032	.	+	.	Name=Leaf_width;B73v2_pos=5:213104671;1allele=T/C;version=Hapmap2;RS=rs846579808;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	221476115	221476214	.	+	.	Name=Plant_height;B73v2_pos=5:213105853;1allele=G/T;version=Hapmap1;RS=rs132297834;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	221476115	221476214	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:213105853;1allele=G/T;version=Hapmap2;RS=rs132297834;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	221477238	221477337	.	+	.	Name=Leaf_length;B73v2_pos=5:213106976;1allele=T/G;version=Hapmap1;RS=rs132297853;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	221477537	221477636	.	+	.	Name=Leaf_length;B73v2_pos=5:213107275;1allele=C/A;version=Hapmap2;RS=rs277956464;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	221544691	221544790	.	+	.	Name=Malate;B73v2_pos=5:213174429;1allele=T/C;version=Hapmap2;RS=rs277956530;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221547850	221547949	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:213177588;1allele=T/A;version=Hapmap2;RS=rs828710738;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	221548454	221548553	.	+	.	Name=Glutamate;B73v2_pos=5:213178192;1allele=/AGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221552146	221552245	.	+	.	Name=Leaf_length;B73v2_pos=5:213181884;1allele=C/T;version=Hapmap2;RS=rs277956588;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221555325	221555424	.	+	.	Name=Leaf_length;B73v2_pos=5:213185063;1allele=C/T;version=Hapmap1;RS=rs132297989;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221673296	221673395	.	+	.	Name=Ear_row_number;B73v2_pos=5:213260166;1allele=T/C;version=Hapmap2;RS=rs132298019;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221678984	221679083	.	+	.	Name=Ear_height;B73v2_pos=5:213265853;1allele=G/C;version=Hapmap2;RS=rs277956672;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	221679027	221679126	.	+	.	Name=Malate;B73v2_pos=5:213265896;1allele=T/C;version=Hapmap2;RS=rs846319525;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221693267	221693366	.	+	.	Name=Leaf_width;B73v2_pos=5:213280136;1allele=G/C;version=Hapmap1;RS=rs132298231;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	221694646	221694745	.	+	.	Name=Tassel_length;B73v2_pos=5:213281515;1allele=A/G;version=Hapmap2;RS=rs132298274;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	221706100	221706199	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:213292969;1allele=T/C;version=Hapmap2;RS=rs806953631;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221718933	221719032	.	+	.	Name=Glutamate;B73v2_pos=5:213305802;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221757169	221757268	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213345758;1allele=A/C;version=Hapmap2;RS=rs835808837;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	221771705	221771804	.	+	.	Name=Ear_row_number;B73v2_pos=5:213360293;1allele=T/G;version=Hapmap2;RS=rs831439139;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	221771992	221772091	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:213360580;1allele=T/A;version=Hapmap2;RS=rs808275773;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	221777230	221777329	.	+	.	Name=Leaf_length;B73v2_pos=5:213365818;1allele=T/G;version=Hapmap1;RS=rs132298569;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	221779047	221779146	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213367635;1allele=C/T;version=Hapmap2;RS=rs817577474;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221837064	221837163	.	+	.	Name=Ear_height;B73v2_pos=5:213424500;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	221931989	221932088	.	+	.	Name=Ear_height;B73v2_pos=5:213516697;1allele=G/C;version=Hapmap2;RS=rs130202437;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	221942083	221942182	.	+	.	Name=Tassel_length;B73v2_pos=5:213526686;1allele=C/T;version=Hapmap1;RS=rs132298695;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221942083	221942182	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:213526686;1allele=C/T;version=Hapmap1;RS=rs132298695;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221949494	221949593	.	+	.	Name=Malate;B73v2_pos=5:213534094;1allele=C/T;version=Hapmap1;RS=rs132298724;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221955666	221955765	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:213540266;1allele=T/C;version=Hapmap2;RS=rs807710886;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221976341	221976440	.	+	.	Name=Leaf_width;B73v2_pos=5:213560942;1allele=T/C;version=Hapmap2;RS=rs841778055;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	221977447	221977546	.	+	.	Name=Cob_diameter;B73v2_pos=5:213562048;1allele=C/T;version=Hapmap1;RS=rs132299031;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	221977459	221977558	.	+	.	Name=Cob_diameter;B73v2_pos=5:213562060;1allele=G/A;version=Hapmap1;RS=rs132299032;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	221979833	221979932	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213564434;1allele=G/A;version=Hapmap2;RS=rs843717252;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	221999362	221999461	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:213583963;1allele=G/T;version=Hapmap1;RS=rs132299087;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	222000982	222001081	.	+	.	Name=Glutamate;B73v2_pos=5:213585583;1allele=G/A;version=Hapmap2;RS=rs277957526;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	222001254	222001353	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:213585855;1allele=T/A;version=Hapmap2;RS=rs827212562;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	222001598	222001697	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213586199;1allele=G/A;version=Hapmap2;RS=rs829291313;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222005733	222005832	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213590334;1allele=T/G;version=Hapmap2;RS=rs815078283;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	222015675	222015774	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213600276;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222017179	222017278	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213601780;1allele=G/A;version=Hapmap2;RS=rs815949874;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222027373	222027472	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213611974;1allele=G/A;version=Hapmap2;RS=rs844638732;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222028902	222029001	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213613503;1allele=G/A;version=Hapmap2;RS=rs847425082;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222106951	222107050	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213718975;1allele=C/T;version=Hapmap2;RS=rs832740072;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	222112097	222112196	.	+	.	Name=Plant_height;B73v2_pos=5:213724121;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222112948	222113047	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:213724972;1allele=A/G;version=Hapmap2;RS=rs832647741;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	222121549	222121648	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213733573;1allele=T/C;version=Hapmap2;RS=rs277957769;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	222125258	222125357	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213737282;1allele=A/G;version=Hapmap2;RS=rs848793159;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222129235	222129334	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213741259;1allele=C/G;version=Hapmap2;RS=rs1064482987;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	222130095	222130194	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213742119;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222130348	222130447	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213742372;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222138616	222138715	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213750640;1allele=C/G;version=Hapmap2;RS=rs130203027;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	222145035	222145134	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213757059;1allele=C/A;version=Hapmap2;RS=rs277957909;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	222145037	222145136	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213757061;1allele=T/A;version=Hapmap2;RS=rs277957910;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	222145315	222145414	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213757339;1allele=T/C;version=Hapmap1;RS=rs132299349;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	222154298	222154397	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:213766322;1allele=G/T;version=Hapmap2;RS=rs801855548;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	222156534	222156633	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213768558;1allele=C/T;version=Hapmap2;RS=rs820551522;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	222225955	222226054	.	+	.	Name=Glutamate;B73v2_pos=5:213820466;1allele=T/A;version=Hapmap2;RS=rs827735026;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	222251809	222251908	.	+	.	Name=Glutamate;B73v2_pos=5:213846320;1allele=C/T;version=Hapmap2;RS=rs130203220;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	222252056	222252155	.	+	.	Name=Glutamate;B73v2_pos=5:213846567;1allele=G/A;version=Hapmap2;RS=rs814373265;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	222252073	222252172	.	+	.	Name=Glutamate;B73v2_pos=5:213846584;1allele=G/A;version=Hapmap2;RS=rs130203222;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	222255682	222255781	.	+	.	Name=Glutamate;B73v2_pos=5:213850189;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222312496	222312595	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:213907003;1allele=C/A;version=Hapmap2;RS=rs130203378;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	222391786	222391885	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:213986293;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222468304	222468403	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214061123;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222468316	222468415	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214061135;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222468468	222468567	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:214061287;1allele=T/C;version=Hapmap2;RS=rs828113340;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	222468468	222468567	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:214061287;1allele=T/C;version=Hapmap2;RS=rs828113340;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	222468469	222468568	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:214061288;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222483674	222483773	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:214076493;1allele=C/G;version=Hapmap2;RS=rs132299769;2ref_allele=C;3alt_allele=G
chr5	Wallace_2014	SNP	222489266	222489365	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:214082085;1allele=C/T;version=Hapmap2;RS=rs277958496;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	222489612	222489711	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:214082431;1allele=G/T;version=Hapmap2;RS=rs277958502;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	222489851	222489950	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:214082670;1allele=T/C;version=Hapmap2;RS=rs277958505;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	222489867	222489966	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:214082686;1allele=G/T;version=Hapmap2;RS=rs277958506;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	222489869	222489968	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:214082688;1allele=T/C;version=Hapmap2;RS=rs848398381;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	222489878	222489977	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=5:214082697;1allele=A/G;version=Hapmap2;RS=rs277958507;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222492014	222492113	.	+	.	Name=Malate;B73v2_pos=5:214084833;1allele=A/G;version=Hapmap1;RS=rs132299849;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	222499254	222499353	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:214092073;1allele=C/T;version=Hapmap1;RS=rs132299925;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	222499758	222499857	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:214092577;1allele=A/G;version=Hapmap2;RS=rs844627594;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	222518220	222518319	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:214111039;1allele=G/A;version=Hapmap2;RS=rs835223478;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222522092	222522191	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214114908;1allele=G/A;version=Hapmap2;RS=rs724992377;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222552622	222552721	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214145439;1allele=C/A;version=Hapmap2;RS=rs833944980;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	222557019	222557118	.	+	.	Name=Malate;B73v2_pos=5:214149836;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222557667	222557766	.	+	.	Name=Leaf_width;B73v2_pos=5:214150484;1allele=C/T;version=Hapmap2;RS=rs277958816;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	222575050	222575149	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:214167887;1allele=C/T;version=Hapmap1;RS=rs130203963;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	222587486	222587585	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:214180238;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	222590660	222590759	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:214183412;1allele=T/A;version=Hapmap2;RS=rs824396616;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	222590660	222590759	.	+	.	Name=Height_above_ear;B73v2_pos=5:214183412;1allele=T/A;version=Hapmap2;RS=rs824396616;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	222694362	222694461	.	+	.	Name=Leaf_width;B73v2_pos=5:214283189;1allele=G/A;version=Hapmap2;RS=rs277958931;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	222700437	222700536	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214289264;1allele=A/C;version=Hapmap2;RS=rs829018287;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	222750753	222750852	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214344008;1allele=G/A;version=Hapmap2;RS=rs810752345;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222819010	222819109	.	+	.	Name=Height_above_ear;B73v2_pos=5:214411227;1allele=A/T;version=Hapmap2;RS=rs804569164;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	222819234	222819333	.	+	.	Name=Leaf_width;B73v2_pos=5:214411451;1allele=A/C;version=Hapmap2;RS=rs132300803;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	222820380	222820479	.	+	.	Name=Leaf_width;B73v2_pos=5:214412597;1allele=C/A;version=Hapmap2;RS=rs132300825;2ref_allele=A;3alt_allele=C
chr5	Wallace_2014	SNP	222836592	222836691	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214428809;1allele=G/A;version=Hapmap2;RS=rs844244246;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222907886	222907985	.	+	.	Name=Tassel_length;B73v2_pos=5:214500105;1allele=T/A;version=Hapmap2;RS=rs841384916;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	222933753	222933852	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214525971;1allele=G/A;version=Hapmap2;RS=rs130204521;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	222937560	222937659	.	+	.	Name=Leaf_width;B73v2_pos=5:214529778;1allele=T/C;version=Hapmap1;RS=rs277959667;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	223016804	223016903	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:214608919;1allele=C/T;version=Hapmap2;RS=rs277959730;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	223114629	223114728	.	+	.	Name=Plant_height;B73v2_pos=5:214706962;1allele=G/A;version=Hapmap2;RS=rs816390662;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223121274	223121373	.	+	.	Name=Leaf_width;B73v2_pos=5:214713601;1allele=T/G;version=Hapmap1;RS=rs132301534;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	223126280	223126379	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214718607;1allele=TT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	223126482	223126581	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:214718809;1allele=A/G;version=Hapmap2;RS=rs841707534;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223126900	223126999	.	+	.	Name=Leaf_width;B73v2_pos=5:214719227;1allele=A/G;version=Hapmap1;RS=rs132301661;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223129948	223130047	.	+	.	Name=Malate;B73v2_pos=5:214722275;1allele=G/C;version=Hapmap2;RS=rs807014724;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	223129991	223130090	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:214722318;1allele=T/C;version=Hapmap2;RS=rs824832135;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	223129996	223130095	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:214722323;1allele=C/T;version=Hapmap2;RS=rs835180322;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	223148374	223148473	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:214740703;1allele=C/T;version=Hapmap2;RS=rs840175644;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	223222911	223223010	.	+	.	Name=Height_above_ear;B73v2_pos=5:214807658;1allele=G/A;version=Hapmap2;RS=rs1061324541;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223362258	223362357	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:214947498;1allele=A/T;version=Hapmap2;RS=rs827273584;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	223362258	223362357	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:214947498;1allele=A/T;version=Hapmap2;RS=rs827273584;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	223368594	223368693	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:214953834;1allele=A/G;version=Hapmap1;RS=rs132302028;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223370943	223371042	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:214956183;1allele=G/C;version=Hapmap2;RS=rs826894345;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	223427518	223427617	.	+	.	Name=Glutamate;B73v2_pos=5:215012758;1allele=A/G;version=Hapmap2;RS=rs130205345;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223427821	223427920	.	+	.	Name=Glutamate;B73v2_pos=5:215013061;1allele=T/C;version=Hapmap2;RS=rs130205350;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	223475290	223475389	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:215060528;1allele=A/G;version=Hapmap2;RS=rs277960983;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223484289	223484388	.	+	.	Name=Leaf_width;B73v2_pos=5:215069213;1allele=T/C;version=Hapmap2;RS=rs130205565;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	223492069	223492168	.	+	.	Name=Leaf_width;B73v2_pos=5:215076993;1allele=T/A;version=Hapmap2;RS=rs277961099;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	223534083	223534182	.	+	.	Name=Leaf_width;B73v2_pos=5:215155355;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	223537970	223538069	.	+	.	Name=Leaf_width;B73v2_pos=5:215151468;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	223594079	223594178	.	+	.	Name=Leaf_width;B73v2_pos=5:215202254;1allele=C/T;version=Hapmap2;RS=rs277961147;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	223599322	223599421	.	+	.	Name=Leaf_width;B73v2_pos=5:215207497;1allele=G/A;version=Hapmap2;RS=rs277961156;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223605813	223605912	.	+	.	Name=Leaf_width;B73v2_pos=5:215213990;1allele=C/T;version=Hapmap2;RS=rs277961166;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	223606884	223606983	.	+	.	Name=Leaf_width;B73v2_pos=5:215215061;1allele=C/T;version=Hapmap2;RS=rs1064651384;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	223620069	223620168	.	+	.	Name=Leaf_width;B73v2_pos=5:215228259;1allele=A/G;version=Hapmap2;RS=rs277961175;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223625514	223625613	.	+	.	Name=Leaf_width;B73v2_pos=5:215233706;1allele=T/A;version=Hapmap2;RS=rs132302614;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	223731238	223731337	.	+	.	Name=Leaf_width;B73v2_pos=5:215339430;1allele=C/G;version=Hapmap2;RS=rs277961932;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	223735217	223735316	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:215343409;1allele=G/A;version=Hapmap2;RS=rs277961970;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223735380	223735479	.	+	.	Name=Leaf_width;B73v2_pos=5:215343572;1allele=G/T;version=Hapmap2;RS=rs277961973;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	223737376	223737475	.	+	.	Name=Leaf_width;B73v2_pos=5:215345568;1allele=G/A;version=Hapmap2;RS=rs277962002;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223737987	223738086	.	+	.	Name=Leaf_width;B73v2_pos=5:215346179;1allele=A/C;version=Hapmap2;RS=rs802289236;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	223742624	223742723	.	+	.	Name=Leaf_width;B73v2_pos=5:215350816;1allele=T/G;version=Hapmap2;RS=rs803086490;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	223745555	223745654	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:215353747;1allele=G/C;version=Hapmap1;RS=rs132302728;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	223751583	223751682	.	+	.	Name=Leaf_width;B73v2_pos=5:215359775;1allele=T/G;version=Hapmap2;RS=rs277962128;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	223753247	223753346	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:215361439;1allele=G/A;version=Hapmap2;RS=rs724790012;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223864154	223864253	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:215472346;1allele=G/A;version=Hapmap1;RS=rs132302822;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	223865533	223865632	.	+	.	Name=Leaf_width;B73v2_pos=5:215473725;1allele=A/G;version=Hapmap2;RS=rs277962313;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223867551	223867650	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:215475743;1allele=G/A;version=Hapmap2;RS=rs841673301;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	223871017	223871116	.	+	.	Name=Leaf_width;B73v2_pos=5:215479209;1allele=G/A;version=Hapmap2;RS=rs277962418;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223875054	223875153	.	+	.	Name=Leaf_width;B73v2_pos=5:215483246;1allele=G/A;version=Hapmap2;RS=rs277962446;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	223877460	223877559	.	+	.	Name=Leaf_width;B73v2_pos=5:215485652;1allele=C/T;version=Hapmap2;RS=rs277962482;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	223878280	223878379	.	+	.	Name=Leaf_width;B73v2_pos=5:215486472;1allele=G/T;version=Hapmap2;RS=rs846378982;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	223881808	223881907	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:215490000;1allele=C/A;version=Hapmap2;RS=rs822670580;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	223910747	223910846	.	+	.	Name=Leaf_width;B73v2_pos=5:215518939;1allele=/TATTGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	223910880	223910979	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:215519072;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	223951585	223951684	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:215559777;1allele=C/T;version=Hapmap2;RS=rs132303167;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	224031236	224031335	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:215616477;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	224035187	224035286	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:215620428;1allele=T/C;version=Hapmap2;RS=rs130206378;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	224038930	224039029	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:215624171;1allele=G/A;version=Hapmap2;RS=rs132303332;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	224044313	224044367	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:215645944;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	224163683	224163782	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:215780084;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	224171001	224171100	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:215787402;1allele=C/A;version=Hapmap2;RS=rs724735674;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	224201436	224201535	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:215810553;1allele=C/A;version=Hapmap2;RS=rs724597156;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	224234713	224234812	.	+	.	Name=Leaf_width;B73v2_pos=5:215843390;1allele=C/T;version=Hapmap2;RS=rs130206947;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	224247289	224247388	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:215855898;1allele=G/A;version=Hapmap2;RS=rs821029023;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	224495152	224495251	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216084458;1allele=C/T;version=Hapmap2;RS=rs130207463;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	224501987	224502087	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:216091293;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	224507030	224507129	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:216096335;1allele=G/A;version=Hapmap2;RS=rs847723526;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	224509888	224509986	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:216099196;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	224592235	224592334	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216180378;1allele=T/A;version=Hapmap2;RS=rs1064530517;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	224592879	224592978	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216181022;1allele=T/G;version=Hapmap2;RS=rs847309310;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	224594003	224594102	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216182146;1allele=G/T;version=Hapmap2;RS=rs277964415;2ref_allele=T;3alt_allele=G
chr5	Wallace_2014	SNP	224617324	224617423	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216203670;1allele=A/T;version=Hapmap2;RS=rs812734329;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	224618038	224618137	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216204384;1allele=G/A;version=Hapmap2;RS=rs130207728;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	224620411	224620510	.	+	.	Name=Cob_diameter;B73v2_pos=5:216206757;1allele=A/G;version=Hapmap2;RS=rs850065520;2ref_allele=A;3alt_allele=G
chr5	Wallace_2014	SNP	224641867	224641966	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:216228215;1allele=C/A;version=Hapmap2;RS=rs130207915;2ref_allele=C;3alt_allele=A
chr5	Wallace_2014	SNP	224672569	224672668	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216256860;1allele=G/C;version=Hapmap2;RS=rs130207998;2ref_allele=G;3alt_allele=C
chr5	Wallace_2014	SNP	224719760	224719859	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216300164;1allele=T/C;version=Hapmap2;RS=rs277964683;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	224787408	224787507	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:140324669;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	224809163	224809262	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=5:216386736;1allele=G/A;version=Hapmap2;RS=rs831985658;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	224837933	224838032	.	+	.	Name=Days_to_silk;B73v2_pos=5:216417020;1allele=C/T;version=Hapmap2;RS=rs821548911;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	224848922	224849021	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:216428011;1allele=T/C;version=Hapmap2;RS=rs840520265;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	224919341	224919440	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216485606;1allele=G/A;version=Hapmap2;RS=rs277965025;2ref_allele=G;3alt_allele=A
chr5	Wallace_2014	SNP	224919352	224919451	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216485617;1allele=G/T;version=Hapmap2;RS=rs277965026;2ref_allele=G;3alt_allele=T
chr5	Wallace_2014	SNP	224966894	224966993	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:216533163;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	224992975	224993074	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:216558970;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr5	Wallace_2014	SNP	225021942	225022041	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:216587942;1allele=T/C;version=Hapmap2;RS=rs277965245;2ref_allele=T;3alt_allele=C
chr5	Wallace_2014	SNP	225046100	225046199	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216612100;1allele=C/T;version=Hapmap2;RS=rs277965348;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	225077926	225078025	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216643928;1allele=T/A;version=Hapmap2;RS=rs130208921;2ref_allele=T;3alt_allele=A
chr5	Wallace_2014	SNP	225078169	225078268	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:216644171;1allele=C/T;version=Hapmap2;RS=rs130208924;2ref_allele=C;3alt_allele=T
chr5	Wallace_2014	SNP	225886651	225886750	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:217476651;1allele=A/T;version=Hapmap2;RS=rs840939430;2ref_allele=A;3alt_allele=T
chr5	Wallace_2014	SNP	225890968	225891067	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:217480968;1allele=A/G;version=Hapmap1;RS=rs132305043;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	5405175	5405274	.	+	.	Name=Leaf_width;B73v2_pos=6:114348;1allele=T/C;version=Hapmap2;RS=rs130211358;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	5426684	5426783	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:135759;1allele=C/T;version=Hapmap2;RS=rs277968048;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	5444825	5444924	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:95276112;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	5658047	5658146	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:411733;1allele=C/T;version=Hapmap2;RS=rs802732331;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	5878389	5878488	.	+	.	Name=Ear_row_number;B73v2_pos=6:629489;1allele=C/T;version=Hapmap2;RS=rs130212000;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	6032678	6032777	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:774199;1allele=T/C;version=Hapmap2;RS=rs803153379;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	6437684	6437783	.	+	.	Name=Leaf_width;B73v2_pos=6:1143720;1allele=C/A;version=Hapmap2;RS=rs810885000;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	6438327	6438426	.	+	.	Name=Leaf_width;B73v2_pos=6:1144363;1allele=C/A;version=Hapmap2;RS=rs833322860;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	6543583	6543682	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:1249027;1allele=C/T;version=Hapmap2;RS=rs842832995;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	6582012	6582111	.	+	.	Name=Leaf_width;B73v2_pos=6:1262332;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	6584008	6584107	.	+	.	Name=Leaf_width;B73v2_pos=6:1260336;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	6639320	6639419	.	+	.	Name=Leaf_width;B73v2_pos=6:1336327;1allele=G/A;version=Hapmap2;RS=rs842489208;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	6644929	6645028	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:1341936;1allele=C/T;version=Hapmap2;RS=rs130212920;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	6703455	6703554	.	+	.	Name=Leaf_width;B73v2_pos=6:1393315;1allele=G/C;version=Hapmap2;RS=rs846815627;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	6820648	6820747	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:1517159;1allele=C/T;version=Hapmap2;RS=rs130213022;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	6840475	6840574	.	+	.	Name=Leaf_width;B73v2_pos=6:1536992;1allele=C/A;version=Hapmap2;RS=rs724970499;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	6841109	6841208	.	+	.	Name=Leaf_width;B73v2_pos=6:1537626;1allele=T/C;version=Hapmap1;RS=rs727348395;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	6844691	6844790	.	+	.	Name=Leaf_width;B73v2_pos=6:1541208;1allele=G/A;version=Hapmap2;RS=rs834551949;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	6854523	6854622	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:1551041;1allele=T/C;version=Hapmap2;RS=rs824060628;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	6947623	6947722	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:1508462;1allele=T/C;version=Hapmap2;RS=rs836877031;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	7001314	7001413	.	+	.	Name=Stalk_strength;B73v2_pos=6:1714958;1allele=G/A;version=Hapmap2;RS=rs803759776;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	7005774	7005873	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:1719417;1allele=A/G;version=Hapmap2;RS=rs805128327;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	7265291	7265390	.	+	.	Name=Days_to_silk;B73v2_pos=6:2039545;1allele=G/A;version=Hapmap1;RS=rs131547530;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	7265643	7265742	.	+	.	Name=Days_to_silk;B73v2_pos=6:2039887;1allele=T/C;version=Hapmap2;RS=rs1061228290;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	7271809	7271908	.	+	.	Name=Ear_row_number;B73v2_pos=6:2046053;1allele=C/G;version=Hapmap2;RS=rs726765220;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	7481318	7481417	.	+	.	Name=Stalk_strength;B73v2_pos=6:2224329;1allele=C/T;version=Hapmap2;RS=rs828603648;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	7635470	7635569	.	+	.	Name=Ear_row_number;B73v2_pos=6:2381471;1allele=G/C;version=Hapmap1;RS=rs130213832;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	7641935	7642034	.	+	.	Name=Ear_row_number;B73v2_pos=6:2387936;1allele=G/A;version=Hapmap2;RS=rs845174562;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	7649376	7649475	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:2395377;1allele=G/T;version=Hapmap2;RS=rs277969794;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	7690317	7690416	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:2428103;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	7692822	7692921	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:2425598;1allele=/AGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	8023434	8023533	.	+	.	Name=Stalk_strength;B73v2_pos=6:2744878;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	8157970	8158069	.	+	.	Name=Stalk_strength;B73v2_pos=6:2881368;1allele=C/T;version=Hapmap2;RS=rs841502844;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	8241540	8241639	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:2966215;1allele=A/G;version=Hapmap2;RS=rs828121679;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	8255104	8255203	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:45414965;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	8513340	8513439	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:3235186;1allele=C/A;version=Hapmap2;RS=rs801471925;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	8565562	8565661	.	+	.	Name=Ear_row_number;B73v2_pos=6:3283257;1allele=G/A;version=Hapmap2;RS=rs812867336;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	8584381	8584480	.	+	.	Name=Nitrate;B73v2_pos=4:157476903;1allele=C/T;version=Hapmap2;RS=rs804811949;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	8894348	8894447	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:3596032;1allele=C/T;version=Hapmap2;RS=rs803390740;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	8939168	8939267	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:3643162;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9168794	9168893	.	+	.	Name=Glutamate;B73v2_pos=6:3868828;1allele=A/G;version=Hapmap2;RS=rs833344629;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	9169194	9169293	.	+	.	Name=Glutamate;B73v2_pos=6:3869228;1allele=G/A;version=Hapmap1;RS=rs130215428;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	9259644	9259743	.	+	.	Name=Stalk_strength;B73v2_pos=6:3968607;1allele=A/G;version=Hapmap2;RS=rs839448125;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	9379321	9379420	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4100836;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9422524	9422623	.	+	.	Name=Ear_height;B73v2_pos=5:201821306;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9422524	9422623	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:201821306;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9422558	9422657	.	+	.	Name=Ear_height;B73v2_pos=5:201821272;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9431857	9431956	.	+	.	Name=Leaf_width;B73v2_pos=6:4143809;1allele=C/T;version=Hapmap2;RS=rs1063860478;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	9434485	9434584	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:4146437;1allele=G/C;version=Hapmap2;RS=rs131549362;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	9435246	9435345	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4147198;1allele=C/A;version=Hapmap2;RS=rs814945252;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	9439050	9439149	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4151002;1allele=/AG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9477022	9477121	.	+	.	Name=Leaf_width;B73v2_pos=6:4258183;1allele=C/A;version=Hapmap2;RS=rs842284376;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	9544119	9544218	.	+	.	Name=Stalk_strength;B73v2_pos=6:4233500;1allele=C/T;version=Hapmap2;RS=rs816893548;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	9571207	9571306	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:4171459;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9588958	9589057	.	+	.	Name=Glutamate;B73v2_pos=6:4308839;1allele=TA/;version=Hapmap1;RS=rs830732277;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	9591026	9591125	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4310907;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	9638800	9638899	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:4351344;1allele=C/A;version=Hapmap2;RS=rs277971039;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	9640406	9640505	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4357956;1allele=C/A;version=Hapmap1;RS=rs130216001;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	9640406	9640505	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:4357956;1allele=C/A;version=Hapmap1;RS=rs130216001;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	9641821	9641920	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4359371;1allele=C/G;version=Hapmap2;RS=rs130216010;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	9642378	9642477	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4359928;1allele=T/C;version=Hapmap2;RS=rs817942468;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	9642495	9642594	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4360045;1allele=T/C;version=Hapmap2;RS=rs807382326;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	9643011	9643110	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4360561;1allele=G/A;version=Hapmap2;RS=rs130216027;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	9643124	9643223	.	+	.	Name=Glutamate;B73v2_pos=6:4360674;1allele=T/A;version=Hapmap2;RS=rs277971062;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	9643124	9643223	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4360674;1allele=T/A;version=Hapmap2;RS=rs277971062;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	9645465	9645564	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:4363015;1allele=G/A;version=Hapmap2;RS=rs1062827551;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	9651626	9651725	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:4369178;1allele=G/T;version=Hapmap2;RS=rs1063377726;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	9730481	9730580	.	+	.	Name=Glutamate;B73v2_pos=6:4438690;1allele=A/G;version=Hapmap1;RS=rs130216202;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	9730954	9731053	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4439163;1allele=G/C;version=Hapmap2;RS=rs835615013;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	9804637	9804736	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4515472;1allele=A/G;version=Hapmap2;RS=rs846940405;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	9881821	9881920	.	+	.	Name=Stalk_strength;B73v2_pos=6:4594824;1allele=G/A;version=Hapmap2;RS=rs277971192;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	9982754	9982853	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:4691548;1allele=A/G;version=Hapmap2;RS=rs130216384;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	10126369	10126468	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4835062;1allele=G/T;version=Hapmap2;RS=rs1063502071;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	10129462	10129561	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:4838155;1allele=A/G;version=Hapmap2;RS=rs1062689791;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	10422448	10422547	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:5160738;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	10428597	10428696	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:5154589;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	10472106	10472205	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:5145685;1allele=A/G;version=Hapmap1;RS=rs130216760;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	10555234	10555333	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:5248878;1allele=A/T;version=Hapmap1;RS=rs131550182;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	10867486	10867585	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:6137030;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11039481	11039580	.	+	.	Name=Sucrose;B73v2_pos=4:175788232;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11071986	11072085	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:5944277;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11073345	11073444	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:5942918;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11073857	11073956	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:5942406;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11211277	11211376	.	+	.	Name=Stalk_strength;B73v2_pos=6:5804987;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11370179	11370278	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:5644062;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11373691	11373790	.	+	.	Name=Glutamate;B73v2_pos=6:5640550;1allele=/GCCAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11562160	11562259	.	+	.	Name=Glucose;B73v2_pos=6:5449439;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11774534	11774626	.	+	.	Name=Leaf_length;B73v2_pos=2:212938744;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11974543	11974642	.	+	.	Name=Protein;B73v2_pos=5:23113418;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	11974556	11974655	.	+	.	Name=Protein;B73v2_pos=5:23113431;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12122372	12122471	.	+	.	Name=Leaf_length;B73v2_pos=6:6544778;1allele=C/T;version=Hapmap2;RS=rs832442042;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	12251988	12252087	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:6617226;1allele=/CGGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12331743	12331842	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:6812120;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12333918	12334017	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:6814295;1allele=-/+;version=Hapmap2;RS=rs823806274;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	12434318	12434417	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:6907537;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12442840	12442939	.	+	.	Name=Cob_diameter;B73v2_pos=6:6899015;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12445100	12445199	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:6896755;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12445217	12445316	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:6896638;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12450608	12450707	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:6891232;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12538087	12538186	.	+	.	Name=Plant_height;B73v2_pos=6:6977663;1allele=C/T;version=Hapmap2;RS=rs809159027;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	12538135	12538234	.	+	.	Name=Height_above_ear;B73v2_pos=6:6977711;1allele=+/-;version=Hapmap2;RS=rs833250899;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	12538843	12538942	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:6978419;1allele=A/T;version=Hapmap2;RS=rs130219564;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	12538967	12539066	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:6978543;1allele=T/C;version=Hapmap2;RS=rs130219566;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	12561948	12562047	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:7001531;1allele=A/C;version=Hapmap2;RS=rs823243713;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	12593825	12593924	.	+	.	Name=Malate;B73v2_pos=6:7035753;1allele=TCTCT/;version=Hapmap1;RS=rs829211207;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	12599452	12599551	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:7041380;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	12736569	12736668	.	+	.	Name=Malate;B73v2_pos=6:7173125;1allele=A/G;version=Hapmap2;RS=rs818835989;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	12819389	12819488	.	+	.	Name=Cob_diameter;B73v2_pos=6:7238356;1allele=T/C;version=Hapmap2;RS=rs821820361;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	13035973	13036072	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:7389368;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	13130199	13130298	.	+	.	Name=Cob_diameter;B73v2_pos=6:7547937;1allele=C/T;version=Hapmap2;RS=rs806558271;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	13198121	13198220	.	+	.	Name=Plant_height;B73v2_pos=2:217060612;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	13390195	13390294	.	+	.	Name=Leaf_length;B73v2_pos=6:7782336;1allele=C/T;version=Hapmap2;RS=rs813854646;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	13659920	13660019	.	+	.	Name=Cob_diameter;B73v2_pos=6:7949374;1allele=T/C;version=Hapmap2;RS=rs821979532;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	13766042	13766141	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:8138190;1allele=A/G;version=Hapmap2;RS=rs813183929;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	13935270	13935369	.	+	.	Name=Malate;B73v2_pos=6:8301161;1allele=T/C;version=Hapmap2;RS=rs130221312;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	13936620	13936719	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:8302512;1allele=G/A;version=Hapmap2;RS=rs1064661775;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	13937424	13937523	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:8303316;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	14015656	14015755	.	+	.	Name=Malate;B73v2_pos=6:8383121;1allele=G/T;version=Hapmap2;RS=rs832470660;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	14218385	14218484	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:8586222;1allele=C/T;version=Hapmap2;RS=rs844520605;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	14253307	14253406	.	+	.	Name=Leaf_length;B73v2_pos=6:8628620;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	14273254	14273353	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:8648568;1allele=G/A;version=Hapmap2;RS=rs832219012;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	14292408	14292507	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:8667729;1allele=A/C;version=Hapmap2;RS=rs1063268036;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	14337376	14337475	.	+	.	Name=Plant_height;B73v2_pos=6:8711706;1allele=C/T;version=Hapmap2;RS=rs849010111;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	14429909	14430008	.	+	.	Name=Cob_diameter;B73v2_pos=6:8813864;1allele=G/A;version=Hapmap2;RS=rs827179915;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	14491799	14491898	.	+	.	Name=Cob_diameter;B73v2_pos=6:8886707;1allele=G/A;version=Hapmap2;RS=rs809747725;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	14604652	14604751	.	+	.	Name=Leaf_length;B73v2_pos=6:8970349;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	14761078	14761177	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:9161918;1allele=G/A;version=Hapmap2;RS=rs847159079;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	15306234	15306333	.	+	.	Name=Days_to_silk;B73v2_pos=6:9692170;1allele=C/T;version=Hapmap2;RS=rs130222559;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	15567187	15567286	.	+	.	Name=Leaf_length;B73v2_pos=6:9954349;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	15649134	15649233	.	+	.	Name=Height_above_ear;B73v2_pos=6:10040013;1allele=T/C;version=Hapmap2;RS=rs1063488516;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	19728781	19728880	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:14313764;1allele=G/A;version=Hapmap2;RS=rs804953271;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	23784095	23784194	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:20396734;1allele=G/A;version=Hapmap2;RS=rs812870515;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	24368247	24368346	.	+	.	Name=Ear_row_number;B73v2_pos=6:19839370;1allele=A/T;version=Hapmap2;RS=rs843520920;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	25431340	25431439	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:18694161;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25610429	25610528	.	+	.	Name=Cob_diameter;B73v2_pos=6:18527467;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25614579	25614678	.	+	.	Name=Leaf_width;B73v2_pos=6:18523317;1allele=A/G;version=Hapmap2;RS=rs827453822;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	25892922	25893021	.	+	.	Name=Ear_row_number;B73v2_pos=6:18250776;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25893726	25893825	.	+	.	Name=Ear_row_number;B73v2_pos=6:18249972;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25898263	25898362	.	+	.	Name=Cob_diameter;B73v2_pos=6:18245435;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25907199	25907298	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:18236595;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25908097	25908196	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:18235697;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25908217	25908316	.	+	.	Name=Cob_diameter;B73v2_pos=6:18235577;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25920163	25920262	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:18223625;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25925681	25925780	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:18218107;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25925796	25925895	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:18217992;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	25929414	25929513	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:18214374;1allele=C/G;version=Hapmap2;RS=rs824974886;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	25930251	25930350	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:18213537;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26054436	26054535	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:18092410;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26163857	26163956	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:17956575;1allele=T/C;version=Hapmap2;RS=rs817125005;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	26215864	26215963	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:17931249;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26281596	26281695	.	+	.	Name=Cob_diameter;B73v2_pos=6:17865443;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26445467	26445566	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:17723992;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26446265	26446364	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:17723194;1allele=C/T;version=Hapmap2;RS=rs806231357;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	26575121	26575220	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:17596750;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26634654	26634753	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:17537351;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26664633	26664732	.	+	.	Name=Cob_diameter;B73v2_pos=6:17507116;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26829973	26830072	.	+	.	Name=Leaf_width;B73v2_pos=6:17344241;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	26869420	26869519	.	+	.	Name=Leaf_width;B73v2_pos=6:17309822;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27113059	27113158	.	+	.	Name=Plant_height;B73v2_pos=6:17129530;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27113851	27113950	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:17128738;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27113980	27114079	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:17128609;1allele=C/T;version=Hapmap2;RS=rs842467004;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	27116251	27116350	.	+	.	Name=Plant_height;B73v2_pos=6:17126338;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27124424	27124523	.	+	.	Name=Plant_height;B73v2_pos=6:17118165;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27124440	27124539	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:17118149;1allele=G/T;version=Hapmap2;RS=rs1062438791;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	27130834	27130933	.	+	.	Name=Plant_height;B73v2_pos=6:17113019;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27130835	27130934	.	+	.	Name=Plant_height;B73v2_pos=6:17113018;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27145623	27145722	.	+	.	Name=Days_to_silk;B73v2_pos=6:17098226;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27249295	27249394	.	+	.	Name=Height_above_ear;B73v2_pos=6:16956237;1allele=T/C;version=Hapmap2;RS=rs803658779;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	27874534	27874633	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:16417255;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27924197	27924296	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:16349374;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	27981701	27981800	.	+	.	Name=Ear_row_number;B73v2_pos=6:16291869;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	28897626	28897725	.	+	.	Name=Ear_row_number;B73v2_pos=6:21413813;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	28904016	28904115	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:21378883;1allele=C/T;version=Hapmap2;RS=rs836581062;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	28907648	28907747	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:21375312;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	29600819	29600918	.	+	.	Name=Plant_height;B73v2_pos=6:21983988;1allele=G/A;version=Hapmap2;RS=rs830772938;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	29955456	29955555	.	+	.	Name=Ear_row_number;B73v2_pos=6:22314938;1allele=T/C;version=Hapmap2;RS=rs1064208784;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	30247034	30247133	.	+	.	Name=Ear_row_number;B73v2_pos=6:22600436;1allele=A/G;version=Hapmap2;RS=rs813589945;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	30250340	30250439	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:22603742;1allele=C/T;version=Hapmap2;RS=rs828547696;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	30484258	30484357	.	+	.	Name=Malate;B73v2_pos=6:22840112;1allele=A/G;version=Hapmap2;RS=rs130226638;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	30820124	30820223	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:23147347;1allele=C/A;version=Hapmap2;RS=rs846839782;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	30961431	30961530	.	+	.	Name=Protein;B73v2_pos=6:23336636;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	30987386	30987485	.	+	.	Name=Tassel_length;B73v2_pos=6:23315260;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	31426571	31426670	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:23732375;1allele=A/G;version=Hapmap2;RS=rs130228260;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	31429084	31429183	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:23734888;1allele=C/T;version=Hapmap2;RS=rs830070112;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	31450983	31451082	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:23756788;1allele=T/C;version=Hapmap2;RS=rs805338185;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	31464595	31464694	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:23771882;1allele=G/C;version=Hapmap2;RS=rs814671737;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	31524175	31524274	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:23831463;1allele=G/A;version=Hapmap2;RS=rs130228495;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	31739664	31739763	.	+	.	Name=Tassel_length;B73v2_pos=6:24003041;1allele=C/T;version=Hapmap2;RS=rs130228931;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	32025928	32026027	.	+	.	Name=Plant_height;B73v2_pos=6:24282210;1allele=C/T;version=Hapmap2;RS=rs803032660;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	32026336	32026435	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:24282618;1allele=/ACA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	32312768	32312867	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:24564564;1allele=T/C;version=Hapmap2;RS=rs833946739;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	32338996	32339095	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:24592550;1allele=C/T;version=Hapmap2;RS=rs812861585;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	32354205	32354304	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:24607790;1allele=A/C;version=Hapmap2;RS=rs130230122;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	32511539	32511638	.	+	.	Name=Height_above_ear;B73v2_pos=6:24847791;1allele=T/A;version=Hapmap2;RS=rs130230754;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	32535937	32536036	.	+	.	Name=Height_above_ear;B73v2_pos=6:24723277;1allele=T/C;version=Hapmap2;RS=rs807647111;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	33049911	33050010	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:25306694;1allele=C/G;version=Hapmap2;RS=rs802301441;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	33061722	33061821	.	+	.	Name=Glutamate;B73v2_pos=6:25318507;1allele=A/T;version=Hapmap2;RS=rs130231893;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	33076985	33077084	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:25333779;1allele=C/A;version=Hapmap2;RS=rs844965392;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	33611822	33611905	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:25843442;1allele=C/T;version=Hapmap2;RS=rs809407161;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	34176121	34176220	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:26403516;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	34271508	34271607	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:26526041;1allele=G/A;version=Hapmap1;RS=rs819877373;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	34589238	34589337	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:26817815;1allele=C/T;version=Hapmap2;RS=rs808926850;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	34801334	34801433	.	+	.	Name=Tassel_length;B73v2_pos=6:27053709;1allele=G/A;version=Hapmap2;RS=rs1064191469;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	34809728	34809827	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27062103;1allele=C/T;version=Hapmap2;RS=rs811681137;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	34809728	34809827	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:27062103;1allele=C/T;version=Hapmap2;RS=rs811681137;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	34893442	34893541	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27143354;1allele=G/T;version=Hapmap2;RS=rs820101740;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	34968471	34968570	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:27196865;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35009271	35009370	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:27236975;1allele=G/A;version=Hapmap2;RS=rs835126363;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	35029502	35029601	.	+	.	Name=Tassel_length;B73v2_pos=6:27250552;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35129421	35129520	.	+	.	Name=Tassel_length;B73v2_pos=6:27350358;1allele=C/T;version=Hapmap2;RS=rs1061291805;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	35131664	35131763	.	+	.	Name=Tassel_length;B73v2_pos=6:27352601;1allele=A/C;version=Hapmap2;RS=rs813023011;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	35206443	35206542	.	+	.	Name=Tassel_length;B73v2_pos=6:27424207;1allele=T/C;version=Hapmap2;RS=rs832030678;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	35280243	35280342	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:27500836;1allele=T/C;version=Hapmap1;RS=rs131555129;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	35371846	35371945	.	+	.	Name=Tassel_length;B73v2_pos=6:27709717;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35449854	35449953	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27646170;1allele=A/C;version=Hapmap2;RS=rs724797030;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	35458474	35458573	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27654793;1allele=A/G;version=Hapmap2;RS=rs806088602;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	35494825	35494924	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27691154;1allele=C/T;version=Hapmap2;RS=rs725072961;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	35550670	35550769	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27802872;1allele=T/C;version=Hapmap2;RS=rs809204507;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	35671302	35671401	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:27880350;1allele=G/A;version=Hapmap1;RS=rs131555265;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	35760091	35760190	.	+	.	Name=Cob_diameter;B73v2_pos=6:27967657;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35760597	35760696	.	+	.	Name=Height_above_ear;B73v2_pos=6:27967151;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35760597	35760696	.	+	.	Name=Plant_height;B73v2_pos=6:27967151;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35760714	35760813	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27967034;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35762047	35762146	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:27965701;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35765759	35765857	.	+	.	Name=Height_above_ear;B73v2_pos=6:27961988;1allele=A/T;version=Hapmap2;RS=rs130234533;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	35773403	35773502	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:27954341;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35800434	35800533	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:27998660;1allele=G/C;version=Hapmap2;RS=rs841272199;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	35830126	35830225	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:28019529;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35830126	35830225	.	+	.	Name=Height_above_ear;B73v2_pos=6:28019529;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35851557	35851656	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:28039437;1allele=C/T;version=Hapmap1;RS=rs131555326;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	35860230	35860329	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:28048117;1allele=G/A;version=Hapmap2;RS=rs130234642;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	35860230	35860329	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:28048117;1allele=G/A;version=Hapmap2;RS=rs130234642;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	35864958	35865057	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:28052845;1allele=G/A;version=Hapmap2;RS=rs130234612;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	35868631	35868730	.	+	.	Name=Tassel_length;B73v2_pos=6:28056518;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35881895	35881994	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:28069048;1allele=T/C;version=Hapmap2;RS=rs130234799;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	35894934	35895033	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:28082087;1allele=G/A;version=Hapmap2;RS=rs823744279;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	35903283	35903382	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:28090435;1allele=C/T;version=Hapmap2;RS=rs849569928;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	35904446	35904545	.	+	.	Name=Height_above_ear;B73v2_pos=6:28091598;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	35905427	35905526	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:28092579;1allele=C/T;version=Hapmap2;RS=rs824547608;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	35910183	35910282	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:28097337;1allele=G/C;version=Hapmap1;RS=rs131555386;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	35928260	35928359	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:28115413;1allele=G/A;version=Hapmap1;RS=rs131555399;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	36005201	36005300	.	+	.	Name=Height_above_ear;B73v2_pos=6:28233417;1allele=G/C;version=Hapmap2;RS=rs827591869;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	36047324	36047423	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:28146904;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	36049181	36049280	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:28145047;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	36273932	36274031	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:28469331;1allele=A/C;version=Hapmap2;RS=rs130235419;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	36480738	36480836	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:28656526;1allele=G/A;version=Hapmap2;RS=rs848069641;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	36554975	36555074	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:28749233;1allele=T/C;version=Hapmap2;RS=rs846356339;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	36575762	36575861	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:28770022;1allele=G/T;version=Hapmap1;RS=rs130235989;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	36575762	36575861	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:28770022;1allele=G/T;version=Hapmap1;RS=rs130235989;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	36674086	36674185	.	+	.	Name=Cob_diameter;B73v2_pos=6:28867019;1allele=A/C;version=Hapmap2;RS=rs130236257;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	36675346	36675445	.	+	.	Name=Cob_diameter;B73v2_pos=6:28868279;1allele=A/G;version=Hapmap2;RS=rs130236275;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	36677365	36677464	.	+	.	Name=Protein;B73v2_pos=6:28870228;1allele=C/T;version=Hapmap1;RS=rs806228207;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	36713059	36713158	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:28902026;1allele=G/A;version=Hapmap2;RS=rs816498295;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	36769097	36769196	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:28958840;1allele=A/G;version=Hapmap2;RS=rs130236460;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	36796997	36797096	.	+	.	Name=Cob_diameter;B73v2_pos=6:28987035;1allele=T/C;version=Hapmap2;RS=rs277988505;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	36814796	36814895	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:29004620;1allele=G/A;version=Hapmap2;RS=rs130236718;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	37325614	37325713	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:29495527;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	37412230	37412329	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:29593784;1allele=G/A;version=Hapmap2;RS=rs839168412;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	37456630	37456729	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:29638157;1allele=T/A;version=Hapmap2;RS=rs813787972;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	37598159	37598258	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:29781701;1allele=G/A;version=Hapmap2;RS=rs277989140;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	37600924	37601023	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:29784466;1allele=C/T;version=Hapmap2;RS=rs130237617;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	37740816	37740915	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:29917014;1allele=C/T;version=Hapmap2;RS=rs1060738111;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	37926757	37926856	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:30107832;1allele=A/G;version=Hapmap2;RS=rs828223518;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	37967033	37967132	.	+	.	Name=Cob_diameter;B73v2_pos=6:30148111;1allele=C/A;version=Hapmap2;RS=rs839892787;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	37983100	37983199	.	+	.	Name=Cob_diameter;B73v2_pos=6:30164180;1allele=C/T;version=Hapmap2;RS=rs803816727;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	38007524	38007623	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:30189467;1allele=G/A;version=Hapmap2;RS=rs830398502;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	38019490	38019589	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:30202187;1allele=C/T;version=Hapmap2;RS=rs277989710;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	38019895	38019994	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:30202592;1allele=A/C;version=Hapmap2;RS=rs820492662;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	38071537	38071636	.	+	.	Name=Tassel_length;B73v2_pos=6:30254049;1allele=G/A;version=Hapmap2;RS=rs277989759;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	38102529	38102628	.	+	.	Name=Plant_height;B73v2_pos=6:30284454;1allele=G/A;version=Hapmap2;RS=rs830969499;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	38106450	38106549	.	+	.	Name=Plant_height;B73v2_pos=6:30288375;1allele=A/G;version=Hapmap2;RS=rs808863511;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	38157372	38157471	.	+	.	Name=Height_above_ear;B73v2_pos=6:30329106;1allele=C/A;version=Hapmap2;RS=rs840350742;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	38158048	38158147	.	+	.	Name=Plant_height;B73v2_pos=6:30329782;1allele=A/C;version=Hapmap2;RS=rs842761631;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	38242894	38242995	.	+	.	Name=Height_above_ear;B73v2_pos=6:30437873;1allele=T/C;version=Hapmap2;RS=rs816356566;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	38364781	38364880	.	+	.	Name=Plant_height;B73v2_pos=6:30557587;1allele=G/A;version=Hapmap2;RS=rs829294161;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	39010423	39010522	.	+	.	Name=Height_above_ear;B73v2_pos=6:31190830;1allele=A/G;version=Hapmap2;RS=rs842664375;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	39032008	39032107	.	+	.	Name=Height_above_ear;B73v2_pos=6:31211266;1allele=T/A;version=Hapmap2;RS=rs813153438;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	39035967	39036066	.	+	.	Name=Height_above_ear;B73v2_pos=6:31215225;1allele=C/G;version=Hapmap2;RS=rs130240548;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	39055417	39055516	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:31234675;1allele=G/T;version=Hapmap2;RS=rs277990953;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	39150178	39150277	.	+	.	Name=Days_to_silk;B73v2_pos=6:31329823;1allele=G/A;version=Hapmap2;RS=rs277991148;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	39401766	39401865	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:31568593;1allele=C/T;version=Hapmap2;RS=rs131557214;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	39401766	39401865	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:31568593;1allele=C/T;version=Hapmap2;RS=rs131557214;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	39435690	39435789	.	+	.	Name=Tassel_length;B73v2_pos=6:31603189;1allele=G/A;version=Hapmap2;RS=rs1064152745;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	39437538	39437637	.	+	.	Name=Tassel_length;B73v2_pos=6:31605036;1allele=T/A;version=Hapmap2;RS=rs277991404;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	39459357	39459456	.	+	.	Name=Tassel_length;B73v2_pos=6:31626860;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	39473904	39474003	.	+	.	Name=Tassel_length;B73v2_pos=6:31641447;1allele=T/C;version=Hapmap2;RS=rs841043898;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	39477543	39477642	.	+	.	Name=Tassel_length;B73v2_pos=6:31645086;1allele=G/A;version=Hapmap2;RS=rs849338927;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	39480779	39480878	.	+	.	Name=Tassel_length;B73v2_pos=6:31648323;1allele=C/A;version=Hapmap2;RS=rs277991445;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	39517877	39517976	.	+	.	Name=Tassel_length;B73v2_pos=6:31682020;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	39532094	39532193	.	+	.	Name=Tassel_length;B73v2_pos=6:31707880;1allele=G/T;version=Hapmap2;RS=rs130241625;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	39541645	39541744	.	+	.	Name=Tassel_length;B73v2_pos=6:31717433;1allele=C/T;version=Hapmap2;RS=rs130241670;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	39808118	39808217	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:32004761;1allele=T/C;version=Hapmap2;RS=rs725918861;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	39983190	39983289	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:32196900;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	40319971	40320070	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:32458357;1allele=G/A;version=Hapmap2;RS=rs277992001;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	40393759	40393858	.	+	.	Name=Tassel_length;B73v2_pos=6:32533112;1allele=G/A;version=Hapmap2;RS=rs130242561;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	40577907	40578006	.	+	.	Name=Tassel_length;B73v2_pos=6:32703959;1allele=G/A;version=Hapmap2;RS=rs819440488;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	40689525	40689624	.	+	.	Name=Plant_height;B73v2_pos=6:32815315;1allele=T/G;version=Hapmap2;RS=rs130243052;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	40816722	40816821	.	+	.	Name=Plant_height;B73v2_pos=6:32942316;1allele=C/G;version=Hapmap2;RS=rs130243365;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	40905708	40905807	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:19675486;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	41055697	41055796	.	+	.	Name=Plant_height;B73v2_pos=6:33224674;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	41331367	41331466	.	+	.	Name=Tassel_length;B73v2_pos=6:33417251;1allele=G/C;version=Hapmap2;RS=rs838893949;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	41361063	41361162	.	+	.	Name=Tassel_length;B73v2_pos=6:33485250;1allele=G/T;version=Hapmap2;RS=rs837975033;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	41410199	41410298	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:33544823;1allele=C/T;version=Hapmap2;RS=rs130244422;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	41449259	41449358	.	+	.	Name=Tassel_length;B73v2_pos=6:33583168;1allele=G/A;version=Hapmap2;RS=rs277992969;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	41471596	41471695	.	+	.	Name=Leaf_length;B73v2_pos=6:33605505;1allele=A/T;version=Hapmap2;RS=rs277992984;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	41618583	41618682	.	+	.	Name=Plant_height;B73v2_pos=1:10860132;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	41679051	41679150	.	+	.	Name=Tassel_length;B73v2_pos=6:33796070;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	41702040	41702139	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:33831673;1allele=C/T;version=Hapmap2;RS=rs820701009;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	42078583	42078682	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:34223443;1allele=T/C;version=Hapmap2;RS=rs818263423;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	42320476	42320575	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:34444222;1allele=G/A;version=Hapmap2;RS=rs847583993;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	42444953	42445052	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:34581851;1allele=C/A;version=Hapmap1;RS=rs130246100;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	42454210	42454309	.	+	.	Name=Plant_height;B73v2_pos=6:34602541;1allele=T/C;version=Hapmap2;RS=rs724815520;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	42455269	42455368	.	+	.	Name=Leaf_length;B73v2_pos=6:34603600;1allele=A/G;version=Hapmap2;RS=rs130246111;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	42740556	42740655	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:34873920;1allele=T/C;version=Hapmap2;RS=rs834838434;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	42763632	42763731	.	+	.	Name=Plant_height;B73v2_pos=6:34894528;1allele=-/+;version=Hapmap2;RS=rs808257876;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	43198835	43198934	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:35393833;1allele=C/G;version=Hapmap2;RS=rs130247484;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	43573725	43573823	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:35711593;1allele=A/G;version=Hapmap2;RS=rs277994938;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	43647292	43647391	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:35734172;1allele=A/T;version=Hapmap2;RS=rs806585524;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	43887964	43888063	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:36001582;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	44127499	44127598	.	+	.	Name=Days_to_silk;B73v2_pos=6:36089154;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	44155757	44155856	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:36182640;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	44317638	44317737	.	+	.	Name=Plant_height;B73v2_pos=6:36334765;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	44362931	44363030	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:36361798;1allele=T/C;version=Hapmap1;RS=rs131559705;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	44363175	44363274	.	+	.	Name=Plant_height;B73v2_pos=6:36362042;1allele=A/G;version=Hapmap2;RS=rs844952878;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	44363186	44363285	.	+	.	Name=Days_to_silk;B73v2_pos=6:36362053;1allele=T/C;version=Hapmap2;RS=rs838741055;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	44381615	44381714	.	+	.	Name=Plant_height;B73v2_pos=6:36380487;1allele=C/A;version=Hapmap2;RS=rs724434921;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	44410718	44410817	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:36400151;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	44429106	44429205	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:36474455;1allele=A/G;version=Hapmap2;RS=rs1064089860;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	44435175	44435274	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:36480525;1allele=G/T;version=Hapmap1;RS=rs131559771;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	44459622	44459721	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:36504973;1allele=A/G;version=Hapmap2;RS=rs827165627;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	44597682	44597781	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:36596884;1allele=T/C;version=Hapmap1;RS=rs131559855;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	44741131	44741230	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:36737260;1allele=G/A;version=Hapmap2;RS=rs819884384;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	44759789	44759888	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:36756093;1allele=A/T;version=Hapmap2;RS=rs847067020;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	44759789	44759888	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:36756093;1allele=A/T;version=Hapmap2;RS=rs847067020;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	44760538	44760637	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:36756842;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	44813306	44813405	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:36807800;1allele=T/C;version=Hapmap2;RS=rs805625670;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	44813736	44813835	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:36808230;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	44909246	44909345	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:36903013;1allele=C/T;version=Hapmap2;RS=rs803159045;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	45768157	45768256	.	+	.	Name=Ear_row_number;B73v2_pos=6:37756088;1allele=C/T;version=Hapmap2;RS=rs1063339091;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	45805368	45805467	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:37793202;1allele=G/A;version=Hapmap2;RS=rs724444855;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	46049449	46049548	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:38018953;1allele=C/T;version=Hapmap2;RS=rs815065104;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	46103307	46103406	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:38075129;1allele=A/T;version=Hapmap2;RS=rs277997132;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	46120287	46120386	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:38092111;1allele=G/T;version=Hapmap2;RS=rs277997211;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	46143358	46143457	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:38115485;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	46278607	46278706	.	+	.	Name=Starch;B73v2_pos=6:38250309;1allele=C/T;version=Hapmap2;RS=rs821326901;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	46310681	46310779	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:38282386;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	46444239	46444338	.	+	.	Name=Plant_height;B73v2_pos=6:38415385;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	46484892	46484991	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:38616439;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	46589369	46589468	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:38554962;1allele=C/T;version=Hapmap2;RS=rs841196779;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	46591735	46591834	.	+	.	Name=Plant_height;B73v2_pos=6:38557328;1allele=A/G;version=Hapmap2;RS=rs826204273;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	46744394	46744493	.	+	.	Name=Height_above_ear;B73v2_pos=6:38713025;1allele=C/G;version=Hapmap2;RS=rs823309357;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	46751746	46751845	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:38720377;1allele=T/C;version=Hapmap2;RS=rs817332796;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	46756102	46756201	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:38724733;1allele=C/T;version=Hapmap2;RS=rs836157684;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	47245111	47245210	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:39198599;1allele=A/G;version=Hapmap2;RS=rs131561103;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	47398395	47398494	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:39370202;1allele=C/T;version=Hapmap1;RS=rs131561186;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	47399104	47399203	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:39370911;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	47401296	47401395	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:39373103;1allele=G/C;version=Hapmap2;RS=rs845724762;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	47401399	47401498	.	+	.	Name=Ear_row_number;B73v2_pos=6:39373206;1allele=A/G;version=Hapmap2;RS=rs130254496;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	47401634	47401733	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:39373441;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	47553565	47553664	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:39515417;1allele=G/T;version=Hapmap2;RS=rs838596875;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	47581514	47581613	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:39543371;1allele=A/G;version=Hapmap2;RS=rs1062940642;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	47690734	47690833	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:39644105;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	47729933	47730032	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:39662883;1allele=A/C;version=Hapmap1;RS=rs819269295;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	47752755	47752854	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:39686539;1allele=G/A;version=Hapmap2;RS=rs848289343;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	47755344	47755443	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:39699713;1allele=C/A;version=Hapmap2;RS=rs277998603;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	47757221	47757320	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:39701592;1allele=G/A;version=Hapmap2;RS=rs820830733;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	47932332	47932431	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:39869409;1allele=G/A;version=Hapmap2;RS=rs804943617;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	48684072	48684171	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:40707188;1allele=C/T;version=Hapmap2;RS=rs724524631;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	48955001	48955100	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:40956438;1allele=G/A;version=Hapmap2;RS=rs813504006;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	49122269	49122368	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:41139592;1allele=C/T;version=Hapmap2;RS=rs834555067;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	49122269	49122368	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:41139592;1allele=C/T;version=Hapmap2;RS=rs834555067;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	49167872	49167971	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:41181417;1allele=C/T;version=Hapmap2;RS=rs817805296;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	49182175	49182274	.	+	.	Name=Days_to_silk;B73v2_pos=6:41195720;1allele=C/T;version=Hapmap2;RS=rs819588414;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	49897344	49897443	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:41908201;1allele=A/G;version=Hapmap2;RS=rs278000147;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	49960689	49960788	.	+	.	Name=Height_above_ear;B73v2_pos=6:41971256;1allele=C/T;version=Hapmap2;RS=rs130257534;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	50178159	50178258	.	+	.	Name=Plant_height;B73v2_pos=6:42183669;1allele=A/G;version=Hapmap2;RS=rs1062620856;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	50264968	50265067	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:42282238;1allele=A/G;version=Hapmap1;RS=rs131562197;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	50498665	50498764	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:42515718;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	50701291	50701390	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:42706485;1allele=G/A;version=Hapmap2;RS=rs847702564;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	50823250	50823349	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:42825017;1allele=T/C;version=Hapmap2;RS=rs846102281;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	50823258	50823357	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:42825025;1allele=T/C;version=Hapmap2;RS=rs824460017;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	51249072	51249171	.	+	.	Name=Protein;B73v2_pos=6:43245184;1allele=C/T;version=Hapmap2;RS=rs130260413;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	51991811	51991910	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:43996726;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	52105298	52105397	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:44099195;1allele=C/T;version=Hapmap2;RS=rs849893966;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	52216840	52216938	.	+	.	Name=Protein;B73v2_pos=6:44211541;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	52288615	52288714	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:298948320;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	52360628	52360727	.	+	.	Name=Ear_row_number;B73v2_pos=6:44355629;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	52718475	52718574	.	+	.	Name=Height_above_ear;B73v2_pos=6:44703676;1allele=T/C;version=Hapmap2;RS=rs815061001;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	55986929	55987028	.	+	.	Name=Cob_diameter;B73v2_pos=6:48045837;1allele=G/A;version=Hapmap1;RS=rs815318108;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	56625658	56625757	.	+	.	Name=Chlorophyll_A;B73v2_pos=5:91637069;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	57454092	57454191	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:49476980;1allele=C/T;version=Hapmap2;RS=rs811939171;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	61252587	61252686	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:149823748;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	62965790	62965889	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:53719028;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	63411793	63411892	.	+	.	Name=Plant_height;B73v2_pos=6:54136200;1allele=C/T;version=Hapmap1;RS=rs131566218;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	65295957	65296056	.	+	.	Name=Malate;B73v2_pos=6:55997865;1allele=C/T;version=Hapmap2;RS=rs130281970;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	65687736	65687835	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:56378965;1allele=A/G;version=Hapmap2;RS=rs849585869;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	65846881	65846980	.	+	.	Name=Ear_height;B73v2_pos=6:56544601;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	65883882	65883981	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:56581614;1allele=T/G;version=Hapmap2;RS=rs844110598;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	65943276	65943375	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:56634578;1allele=G/A;version=Hapmap2;RS=rs808917001;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	65956992	65957091	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:56648296;1allele=C/T;version=Hapmap2;RS=rs1063621488;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	66685556	66685655	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:57402641;1allele=C/T;version=Hapmap2;RS=rs131567156;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	66776075	66776174	.	+	.	Name=Days_to_silk;B73v2_pos=6:57492998;1allele=G/A;version=Hapmap2;RS=rs845441914;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	66879699	66879798	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:57596274;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	66901568	66901667	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:57618031;1allele=A/C;version=Hapmap2;RS=rs849434860;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	66974500	66974599	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:57691604;1allele=C/T;version=Hapmap2;RS=rs826407912;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	66981858	66981957	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:57698963;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	66982640	66982739	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:57699745;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	66983570	66983669	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:57700675;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	67061281	67061380	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:57761396;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	67588967	67589066	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:58273825;1allele=T/C;version=Hapmap2;RS=rs824660102;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	67633326	67633425	.	+	.	Name=Cob_diameter;B73v2_pos=6:58318917;1allele=C/T;version=Hapmap2;RS=rs130286841;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	67646793	67646892	.	+	.	Name=Cob_diameter;B73v2_pos=6:58332387;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	67651700	67651799	.	+	.	Name=Cob_diameter;B73v2_pos=6:58337294;1allele=C/T;version=Hapmap2;RS=rs804444356;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	67657213	67657312	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:58342807;1allele=G/A;version=Hapmap2;RS=rs828421089;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	67851795	67851894	.	+	.	Name=Leaf_length;B73v2_pos=6:58556852;1allele=G/T;version=Hapmap2;RS=rs803973362;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	68583220	68583319	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:59333882;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	69596538	69596637	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:60292590;1allele=A/G;version=Hapmap1;RS=rs131568514;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	70158199	70158298	.	+	.	Name=Ear_row_number;B73v2_pos=6:60872738;1allele=C/T;version=Hapmap2;RS=rs826296895;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	70188805	70188904	.	+	.	Name=Ear_row_number;B73v2_pos=6:60903355;1allele=C/T;version=Hapmap2;RS=rs803754948;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	70651400	70651499	.	+	.	Name=Leaf_length;B73v2_pos=6:61386687;1allele=C/T;version=Hapmap2;RS=rs820402689;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	70658059	70658158	.	+	.	Name=Starch;B73v2_pos=6:61393347;1allele=G/T;version=Hapmap2;RS=rs819120805;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	70730632	70730731	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=1:130845915;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	70842653	70842752	.	+	.	Name=Leaf_length;B73v2_pos=6:61570373;1allele=C/T;version=Hapmap2;RS=rs830819506;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	70922769	70922868	.	+	.	Name=Ear_row_number;B73v2_pos=6:61650261;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	70974363	70974462	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:61700466;1allele=C/T;version=Hapmap2;RS=rs725890444;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	70978049	70978148	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:61704152;1allele=G/A;version=Hapmap2;RS=rs824413538;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	71002093	71002192	.	+	.	Name=Ear_row_number;B73v2_pos=6:61728196;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	71013143	71013242	.	+	.	Name=Ear_row_number;B73v2_pos=6:61739245;1allele=C/T;version=Hapmap2;RS=rs819381417;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	71154227	71154326	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:61873427;1allele=G/T;version=Hapmap2;RS=rs818091478;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	71154238	71154337	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:61873438;1allele=C/G;version=Hapmap2;RS=rs849128991;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	71166723	71166822	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:61885923;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	71251030	71251129	.	+	.	Name=Ear_row_number;B73v2_pos=6:61966638;1allele=T/G;version=Hapmap2;RS=rs130298148;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	71339717	71339816	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:62056723;1allele=C/A;version=Hapmap2;RS=rs130298511;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	71341342	71341441	.	+	.	Name=Total_amino_acids;B73v2_pos=6:62058348;1allele=T/G;version=Hapmap2;RS=rs835407634;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	71424673	71424772	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:62141685;1allele=G/A;version=Hapmap2;RS=rs843266720;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	71531691	71531790	.	+	.	Name=Ear_row_number;B73v2_pos=6:62209984;1allele=G/A;version=Hapmap2;RS=rs834904664;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	71602768	71602867	.	+	.	Name=Ear_row_number;B73v2_pos=6:62318740;1allele=C/T;version=Hapmap2;RS=rs807387566;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	71855661	71855760	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:62553998;1allele=G/A;version=Hapmap2;RS=rs822522754;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	71857920	71858019	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:62556257;1allele=C/T;version=Hapmap2;RS=rs845833811;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	71880612	71880711	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:62573557;1allele=A/G;version=Hapmap2;RS=rs1063923927;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	71881901	71882000	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:62574846;1allele=T/C;version=Hapmap2;RS=rs1060728432;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	72032216	72032315	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:62720740;1allele=G/A;version=Hapmap1;RS=rs131569533;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	72126434	72126533	.	+	.	Name=Total_amino_acids;B73v2_pos=6:62813648;1allele=C/T;version=Hapmap2;RS=rs1062444760;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	72351013	72351112	.	+	.	Name=Leaf_length;B73v2_pos=6:63031643;1allele=G/C;version=Hapmap2;RS=rs816054462;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	72732520	72732619	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:63356261;1allele=T/C;version=Hapmap2;RS=rs131569790;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	73146767	73146866	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:63780831;1allele=G/T;version=Hapmap2;RS=rs1063657338;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	73203340	73203439	.	+	.	Name=Plant_height;B73v2_pos=6:63837414;1allele=A/G;version=Hapmap2;RS=rs130342005;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	73216830	73216929	.	+	.	Name=Total_amino_acids;B73v2_pos=6:63850074;1allele=T/C;version=Hapmap2;RS=rs805489762;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	73218328	73218427	.	+	.	Name=Total_amino_acids;B73v2_pos=6:63851572;1allele=G/T;version=Hapmap2;RS=rs725063026;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	73271383	73271482	.	+	.	Name=Plant_height;B73v2_pos=6:63904983;1allele=C/T;version=Hapmap2;RS=rs801859085;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	74546850	74546949	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65097060;1allele=C/T;version=Hapmap2;RS=rs820150325;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	74723328	74723427	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:65271252;1allele=T/A;version=Hapmap2;RS=rs807529823;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	74883417	74883516	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65427897;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	75053600	75053699	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65599745;1allele=G/A;version=Hapmap2;RS=rs814786590;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	75075404	75075503	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65621548;1allele=A/G;version=Hapmap2;RS=rs823207502;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	75108983	75109082	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65655132;1allele=G/A;version=Hapmap2;RS=rs828958490;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	75113517	75113616	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65659667;1allele=C/T;version=Hapmap2;RS=rs810247810;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75113517	75113616	.	+	.	Name=Plant_height;B73v2_pos=6:65659667;1allele=C/T;version=Hapmap2;RS=rs810247810;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75117855	75117954	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65664005;1allele=T/G;version=Hapmap2;RS=rs824512374;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	75136589	75136688	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65682646;1allele=T/C;version=Hapmap2;RS=rs826573958;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75175914	75176013	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65721976;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	75179323	75179422	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65725385;1allele=G/A;version=Hapmap2;RS=rs826108218;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	75195233	75195332	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65741296;1allele=C/T;version=Hapmap2;RS=rs130302727;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75209700	75209799	.	+	.	Name=Plant_height;B73v2_pos=6:65755763;1allele=C/T;version=Hapmap2;RS=rs847190814;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75214235	75214334	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:65760298;1allele=C/T;version=Hapmap2;RS=rs726034078;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75241861	75241960	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65797441;1allele=G/A;version=Hapmap2;RS=rs278024961;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	75242775	75242874	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65798355;1allele=C/T;version=Hapmap2;RS=rs808181893;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75243735	75243834	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65799315;1allele=G/A;version=Hapmap2;RS=rs838603437;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	75247834	75247933	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65792621;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	75273349	75273448	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65820366;1allele=C/A;version=Hapmap2;RS=rs823159212;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	75291507	75291606	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65838525;1allele=A/G;version=Hapmap2;RS=rs805396233;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	75300652	75300751	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65847505;1allele=T/C;version=Hapmap2;RS=rs831455931;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	75368750	75368849	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:65914381;1allele=A/G;version=Hapmap2;RS=rs813771746;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	75385300	75385399	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65930928;1allele=G/A;version=Hapmap2;RS=rs812873285;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	75429571	75429670	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:65974454;1allele=G/A;version=Hapmap2;RS=rs836248912;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	75570022	75570121	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:66086255;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	75606623	75606722	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:66119801;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	75816495	75816594	.	+	.	Name=Total_amino_acids;B73v2_pos=6:66364998;1allele=A/G;version=Hapmap2;RS=rs131570566;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	75871693	75871792	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:66420007;1allele=C/T;version=Hapmap2;RS=rs1063546256;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	76535725	76535825	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:106182597;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	76728555	76728654	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:67257869;1allele=C/T;version=Hapmap2;RS=rs842637796;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	77079125	77079224	.	+	.	Name=Plant_height;B73v2_pos=6:67589042;1allele=C/T;version=Hapmap2;RS=rs803717194;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	77079125	77079224	.	+	.	Name=Ear_height;B73v2_pos=6:67589042;1allele=C/T;version=Hapmap2;RS=rs803717194;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	77449766	77449865	.	+	.	Name=Ear_height;B73v2_pos=6:68001975;1allele=A/G;version=Hapmap2;RS=rs826759702;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	77662866	77662965	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:68231753;1allele=C/G;version=Hapmap2;RS=rs820639437;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	77735459	77735558	.	+	.	Name=Height_above_ear;B73v2_pos=6:68304927;1allele=A/T;version=Hapmap1;RS=rs131571258;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	78064828	78064927	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:68620291;1allele=G/A;version=Hapmap2;RS=rs278026977;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	78317513	78317612	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:68875215;1allele=A/G;version=Hapmap2;RS=rs130306228;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	78463188	78463287	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:69012381;1allele=T/A;version=Hapmap1;RS=rs131571578;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	78533566	78533665	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:69078279;1allele=T/C;version=Hapmap2;RS=rs850087001;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	78741410	78741509	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:69285828;1allele=A/G;version=Hapmap2;RS=rs130306698;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	78824072	78824171	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:69397007;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	79003300	79003399	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:69565052;1allele=C/T;version=Hapmap2;RS=rs821975614;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	79306658	79306757	.	+	.	Name=Protein;B73v2_pos=6:69883280;1allele=A/T;version=Hapmap2;RS=rs1060953587;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	79309044	79309143	.	+	.	Name=Protein;B73v2_pos=6:69885667;1allele=T/C;version=Hapmap2;RS=rs827199261;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	79311828	79311927	.	+	.	Name=Protein;B73v2_pos=6:69888452;1allele=T/C;version=Hapmap2;RS=rs834668215;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	79347134	79347233	.	+	.	Name=Protein;B73v2_pos=6:69926199;1allele=T/C;version=Hapmap2;RS=rs726559368;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	79348986	79349085	.	+	.	Name=Protein;B73v2_pos=6:69928051;1allele=T/C;version=Hapmap2;RS=rs278028335;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	79411505	79411604	.	+	.	Name=Total_amino_acids;B73v2_pos=6:69982455;1allele=/AGCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	79436044	79436143	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:70013004;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	79575737	79575836	.	+	.	Name=Fructose;B73v2_pos=6:70135741;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	79709374	79709473	.	+	.	Name=Total_amino_acids;B73v2_pos=6:70274213;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	79709377	79709476	.	+	.	Name=Total_amino_acids;B73v2_pos=6:70274216;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	79814901	79815000	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:70376146;1allele=C/G;version=Hapmap2;RS=rs849451361;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	79877053	79877152	.	+	.	Name=Total_amino_acids;B73v2_pos=6:70438303;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	79961643	79961742	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:70575684;1allele=G/A;version=Hapmap2;RS=rs818337707;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	80213220	80213319	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:70847383;1allele=C/T;version=Hapmap2;RS=rs725914194;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	80226372	80226471	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:70860535;1allele=C/T;version=Hapmap2;RS=rs130308731;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	80277422	80277521	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:70886923;1allele=C/T;version=Hapmap2;RS=rs820403619;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	80282384	80282483	.	+	.	Name=Days_to_silk;B73v2_pos=6:70891885;1allele=T/C;version=Hapmap2;RS=rs828350511;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	80337264	80337363	.	+	.	Name=Leaf_length;B73v2_pos=6:70945827;1allele=A/T;version=Hapmap2;RS=rs833217923;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	80364332	80364431	.	+	.	Name=Days_to_silk;B73v2_pos=6:70972849;1allele=G/C;version=Hapmap2;RS=rs840774205;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	80935108	80935207	.	+	.	Name=Leaf_length;B73v2_pos=6:71529130;1allele=G/A;version=Hapmap2;RS=rs839073264;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	81049511	81049610	.	+	.	Name=Protein;B73v2_pos=6:71648048;1allele=A/G;version=Hapmap2;RS=rs130310153;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	81213727	81213826	.	+	.	Name=Protein;B73v2_pos=6:71792219;1allele=G/A;version=Hapmap2;RS=rs1062733718;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	81330895	81330994	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:71868796;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	81333898	81333997	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:71865793;1allele=A/G;version=Hapmap2;RS=rs825230527;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	81334231	81334330	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:71865460;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	81335171	81335270	.	+	.	Name=Protein;B73v2_pos=6:71864520;1allele=C/T;version=Hapmap2;RS=rs835061802;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	81345942	81346041	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:71921205;1allele=C/T;version=Hapmap1;RS=rs130310787;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	81802421	81802520	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:72371795;1allele=C/T;version=Hapmap1;RS=rs131573315;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	81913363	81913462	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:72476698;1allele=C/T;version=Hapmap1;RS=rs131573362;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	81913544	81913643	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:72476879;1allele=A/C;version=Hapmap2;RS=rs130311329;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	82057265	82057364	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:72621243;1allele=T/C;version=Hapmap2;RS=rs807800321;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	82354599	82354698	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:73018331;1allele=G/A;version=Hapmap2;RS=rs726776911;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	82460694	82460793	.	+	.	Name=Total_amino_acids;B73v2_pos=6:73123303;1allele=A/G;version=Hapmap2;RS=rs278031440;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	82461562	82461661	.	+	.	Name=Leaf_length;B73v2_pos=6:73124171;1allele=G/A;version=Hapmap2;RS=rs829384771;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	82497291	82497390	.	+	.	Name=Total_amino_acids;B73v2_pos=6:73159898;1allele=T/G;version=Hapmap2;RS=rs130312479;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	82498287	82498386	.	+	.	Name=Total_amino_acids;B73v2_pos=6:73160894;1allele=C/T;version=Hapmap2;RS=rs130312483;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	82684053	82684152	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:73375179;1allele=C/T;version=Hapmap2;RS=rs811117739;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	82766473	82766572	.	+	.	Name=Total_amino_acids;B73v2_pos=6:73329758;1allele=A/G;version=Hapmap1;RS=rs821901691;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	82855519	82855618	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:73540697;1allele=C/G;version=Hapmap2;RS=rs278032123;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	82976939	82977038	.	+	.	Name=Total_amino_acids;B73v2_pos=6:73657885;1allele=A/G;version=Hapmap2;RS=rs844210881;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	83057946	83058045	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:73752933;1allele=A/G;version=Hapmap2;RS=rs1062492759;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	83059354	83059453	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:73754341;1allele=G/A;version=Hapmap2;RS=rs823492028;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	83082349	83082448	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:73780869;1allele=A/G;version=Hapmap2;RS=rs1061938367;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	83113824	83113923	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:73811708;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83113824	83113923	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:73811708;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83128800	83128899	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:73826687;1allele=T/C;version=Hapmap2;RS=rs803408159;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83173371	83173470	.	+	.	Name=Leaf_length;B73v2_pos=6:73891034;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83232229	83232328	.	+	.	Name=Ear_row_number;B73v2_pos=6:73921789;1allele=C/T;version=Hapmap2;RS=rs130313836;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83285274	83285373	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:73994245;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83285501	83285600	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:73994018;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83289652	83289751	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:73989867;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83352928	83353027	.	+	.	Name=Protein;B73v2_pos=6:74033842;1allele=A/G;version=Hapmap2;RS=rs131574005;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	83355699	83355798	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:74036613;1allele=G/A;version=Hapmap2;RS=rs278032658;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	83355715	83355814	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:74036629;1allele=C/T;version=Hapmap2;RS=rs278032659;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83402635	83402734	.	+	.	Name=Protein;B73v2_pos=6:74073742;1allele=G/T;version=Hapmap2;RS=rs130314147;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	83403358	83403457	.	+	.	Name=Protein;B73v2_pos=6:74074465;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83404161	83404260	.	+	.	Name=Protein;B73v2_pos=6:74075268;1allele=C/G;version=Hapmap2;RS=rs130314155;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	83404258	83404357	.	+	.	Name=Protein;B73v2_pos=6:74075365;1allele=T/C;version=Hapmap2;RS=rs130314157;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83427428	83427527	.	+	.	Name=Protein;B73v2_pos=6:74099711;1allele=C/T;version=Hapmap2;RS=rs130314164;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83429141	83429240	.	+	.	Name=Total_amino_acids;B73v2_pos=6:74101424;1allele=A/C;version=Hapmap2;RS=rs840283272;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	83429386	83429485	.	+	.	Name=Protein;B73v2_pos=6:74101669;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83429438	83429537	.	+	.	Name=Protein;B73v2_pos=6:74101721;1allele=T/A;version=Hapmap2;RS=rs1061982623;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	83429964	83430063	.	+	.	Name=Protein;B73v2_pos=6:74102247;1allele=/TACCGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83430197	83430296	.	+	.	Name=Protein;B73v2_pos=6:74102480;1allele=T/C;version=Hapmap2;RS=rs278032722;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83430870	83430969	.	+	.	Name=Protein;B73v2_pos=6:74103153;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83480664	83480763	.	+	.	Name=Protein;B73v2_pos=6:74136391;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83482836	83482935	.	+	.	Name=Protein;B73v2_pos=6:74138563;1allele=C/T;version=Hapmap2;RS=rs832030813;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83482871	83482970	.	+	.	Name=Protein;B73v2_pos=6:74138598;1allele=G/A;version=Hapmap2;RS=rs809836413;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	83542396	83542495	.	+	.	Name=Protein;B73v2_pos=6:74212917;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83566730	83566829	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:74185892;1allele=T/C;version=Hapmap2;RS=rs804533821;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	83696881	83696980	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74356564;1allele=T/A;version=Hapmap2;RS=rs843828072;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	83697572	83697671	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74357255;1allele=C/T;version=Hapmap2;RS=rs130314636;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83699081	83699180	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74358764;1allele=C/T;version=Hapmap2;RS=rs130314660;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83729555	83729654	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74389241;1allele=C/T;version=Hapmap2;RS=rs819897406;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83730280	83730379	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74389966;1allele=C/T;version=Hapmap2;RS=rs130314708;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83730349	83730448	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74390035;1allele=T/C;version=Hapmap2;RS=rs278032965;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83744905	83745004	.	+	.	Name=Cob_diameter;B73v2_pos=6:74404592;1allele=G/C;version=Hapmap2;RS=rs725997184;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	83745122	83745221	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74404809;1allele=A/G;version=Hapmap2;RS=rs278032972;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	83746036	83746135	.	+	.	Name=Cob_diameter;B73v2_pos=6:74405723;1allele=T/C;version=Hapmap2;RS=rs130314727;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83794139	83794238	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74450439;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83806704	83806803	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:74459191;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83820521	83820620	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:74476469;1allele=T/C;version=Hapmap2;RS=rs804943631;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83820521	83820620	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:74476469;1allele=T/C;version=Hapmap2;RS=rs804943631;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83821280	83821379	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74477228;1allele=T/C;version=Hapmap2;RS=rs837163172;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83825713	83825812	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:74481661;1allele=A/G;version=Hapmap2;RS=rs826151391;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	83826111	83826210	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74482059;1allele=C/A;version=Hapmap2;RS=rs848848027;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	83829070	83829169	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74485018;1allele=A/G;version=Hapmap2;RS=rs844995068;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	83829746	83829845	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:74485694;1allele=A/C;version=Hapmap2;RS=rs727194287;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	83872367	83872466	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74526699;1allele=T/C;version=Hapmap2;RS=rs724171331;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	83873955	83874054	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74528287;1allele=A/G;version=Hapmap2;RS=rs278033152;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	83893779	83893878	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74548114;1allele=C/T;version=Hapmap2;RS=rs803150820;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	83968329	83968428	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74626981;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	83987323	83987422	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:74607980;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	84799207	84799306	.	+	.	Name=Leaf_length;B73v2_pos=6:75469451;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	84945888	84945987	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:75634447;1allele=T/C;version=Hapmap2;RS=rs278034290;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	84945989	84946088	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:75634548;1allele=T/C;version=Hapmap2;RS=rs130316851;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	85100711	85100810	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:75743463;1allele=G/C;version=Hapmap1;RS=rs131574872;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	85102223	85102322	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:75744975;1allele=G/A;version=Hapmap2;RS=rs130317049;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	85135590	85135689	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:75777728;1allele=G/C;version=Hapmap2;RS=rs278034384;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	85135590	85135689	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:75777728;1allele=G/C;version=Hapmap2;RS=rs278034384;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	85138306	85138405	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:75780444;1allele=A/G;version=Hapmap2;RS=rs831310132;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	85138321	85138420	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:75780459;1allele=C/A;version=Hapmap2;RS=rs812629585;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	85153424	85153523	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:75795564;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	85174044	85174143	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:75818560;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	85174044	85174143	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:75818560;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	85174627	85174726	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:75819143;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	86048607	86048706	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:76580521;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	86255645	86255744	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:76777802;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	86452216	86452315	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:76994583;1allele=A/C;version=Hapmap2;RS=rs842827228;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	86696973	86697072	.	+	.	Name=Tassel_length;B73v2_pos=6:77227754;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	86761579	86761678	.	+	.	Name=Leaf_length;B73v2_pos=6:77283721;1allele=T/C;version=Hapmap2;RS=rs828438340;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	87236728	87236827	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:77770036;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	87273505	87273604	.	+	.	Name=Tassel_length;B73v2_pos=6:77803148;1allele=G/A;version=Hapmap2;RS=rs832043654;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	87623577	87623676	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:78156885;1allele=T/G;version=Hapmap2;RS=rs1061350726;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	87626177	87626276	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:78159485;1allele=T/C;version=Hapmap2;RS=rs835458949;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	88121271	88121370	.	+	.	Name=Stalk_strength;B73v2_pos=3:19905657;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	88281159	88281258	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:78735152;1allele=G/T;version=Hapmap2;RS=rs131575733;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	88281188	88281287	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:78735181;1allele=C/A;version=Hapmap2;RS=rs131575736;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	88281641	88281740	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:78735634;1allele=G/A;version=Hapmap1;RS=rs130321120;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	88428720	88428819	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:76119040;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	88632647	88632746	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:79139204;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	89074345	89074444	.	+	.	Name=Tassel_length;B73v2_pos=6:79505145;1allele=T/A;version=Hapmap2;RS=rs809301362;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	89125166	89125265	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:79561770;1allele=G/T;version=Hapmap2;RS=rs843069500;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	89170134	89170233	.	+	.	Name=Tassel_length;B73v2_pos=6:79629300;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	89569159	89569258	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:80010186;1allele=C/T;version=Hapmap2;RS=rs812470982;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	89605257	89605356	.	+	.	Name=Tassel_length;B73v2_pos=6:80037528;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	89632993	89633092	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:80065281;1allele=A/G;version=Hapmap2;RS=rs829110263;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	89985604	89985703	.	+	.	Name=Leaf_length;B73v2_pos=6:80365809;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	90035037	90035136	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:80415247;1allele=G/A;version=Hapmap1;RS=rs130324803;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	90273958	90274057	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:80651122;1allele=A/G;version=Hapmap2;RS=rs822412058;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	90340169	90340268	.	+	.	Name=Total_amino_acids;B73v2_pos=6:80725128;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	90398635	90398734	.	+	.	Name=Total_amino_acids;B73v2_pos=6:80783111;1allele=C/T;version=Hapmap2;RS=rs844440759;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	90446240	90446339	.	+	.	Name=Total_amino_acids;B73v2_pos=6:80828497;1allele=A/T;version=Hapmap2;RS=rs829741320;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	90447527	90447626	.	+	.	Name=Total_amino_acids;B73v2_pos=6:80829784;1allele=G/A;version=Hapmap2;RS=rs828631588;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	90469589	90469688	.	+	.	Name=Total_amino_acids;B73v2_pos=6:80851847;1allele=T/A;version=Hapmap2;RS=rs802029567;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	90494783	90494882	.	+	.	Name=Total_amino_acids;B73v2_pos=6:80877041;1allele=A/T;version=Hapmap2;RS=rs808578503;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	90541823	90541922	.	+	.	Name=Total_amino_acids;B73v2_pos=6:80933319;1allele=C/A;version=Hapmap1;RS=rs131576445;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	90646404	90646503	.	+	.	Name=Total_amino_acids;B73v2_pos=6:81038220;1allele=G/A;version=Hapmap2;RS=rs806422195;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	90654107	90654206	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:81045923;1allele=G/A;version=Hapmap2;RS=rs830707236;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	90721415	90721514	.	+	.	Name=Tassel_length;B73v2_pos=6:81112383;1allele=G/A;version=Hapmap2;RS=rs848521972;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	91113215	91113314	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:81484523;1allele=A/T;version=Hapmap2;RS=rs826880005;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	91645327	91645426	.	+	.	Name=Tassel_length;B73v2_pos=6:82019431;1allele=A/G;version=Hapmap2;RS=rs278040553;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	91645935	91646034	.	+	.	Name=Tassel_length;B73v2_pos=6:82020039;1allele=C/T;version=Hapmap2;RS=rs725811314;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	91689783	91689882	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:82064109;1allele=C/T;version=Hapmap2;RS=rs727134441;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	92285654	92285753	.	+	.	Name=Protein;B73v2_pos=6:82619469;1allele=G/A;version=Hapmap2;RS=rs820307109;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	92311463	92311562	.	+	.	Name=Fructose;B73v2_pos=6:82699472;1allele=G/A;version=Hapmap2;RS=rs845823383;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	92342460	92342559	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:82725192;1allele=G/A;version=Hapmap2;RS=rs130329046;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	92371740	92371839	.	+	.	Name=Days_to_silk;B73v2_pos=6:82758172;1allele=A/G;version=Hapmap2;RS=rs131577190;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	92382560	92382659	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:82768821;1allele=G/T;version=Hapmap2;RS=rs130329146;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	92426248	92426347	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:82813955;1allele=T/C;version=Hapmap1;RS=rs131577285;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	92580045	92580144	.	+	.	Name=Total_amino_acids;B73v2_pos=6:82966925;1allele=C/A;version=Hapmap2;RS=rs130329514;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	92875302	92875401	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:83175889;1allele=G/T;version=Hapmap2;RS=rs130329680;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	92921127	92921226	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:83221528;1allele=A/G;version=Hapmap2;RS=rs278041089;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	92923598	92923697	.	+	.	Name=Leaf_length;B73v2_pos=6:83224030;1allele=C/A;version=Hapmap2;RS=rs826458550;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	92930224	92930323	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:83230658;1allele=C/G;version=Hapmap2;RS=rs278041117;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	93130055	93130154	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:83442859;1allele=G/A;version=Hapmap2;RS=rs820512851;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	93470848	93470947	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:83772021;1allele=C/T;version=Hapmap2;RS=rs1061315401;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	93528390	93528489	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:83829568;1allele=T/C;version=Hapmap1;RS=rs131577860;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	93959831	93959930	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:84281196;1allele=C/G;version=Hapmap2;RS=rs839781928;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	94060155	94060254	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:84382261;1allele=G/C;version=Hapmap2;RS=rs850235547;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	94201232	94201331	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:84522470;1allele=G/T;version=Hapmap2;RS=rs805008921;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	94205162	94205261	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:84526400;1allele=A/G;version=Hapmap2;RS=rs807108734;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	94205479	94205578	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:84526717;1allele=G/T;version=Hapmap2;RS=rs823635355;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	94253984	94254083	.	+	.	Name=Fructose;B73v2_pos=6:84575225;1allele=G/A;version=Hapmap1;RS=rs131578417;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	94316774	94316873	.	+	.	Name=Fructose;B73v2_pos=6:84635270;1allele=G/A;version=Hapmap2;RS=rs725664203;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	94347282	94347381	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:84665778;1allele=C/A;version=Hapmap2;RS=rs727142924;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	94367482	94367581	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:84685979;1allele=A/G;version=Hapmap2;RS=rs825830340;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	94490852	94490951	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:85185143;1allele=A/G;version=Hapmap2;RS=rs834456656;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	94516173	94516272	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:85206824;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	94516173	94516272	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:85206824;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	94720880	94720979	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:85417050;1allele=C/T;version=Hapmap2;RS=rs813331091;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	94745461	94745560	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:85441634;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	94834581	94834680	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:85524321;1allele=C/A;version=Hapmap2;RS=rs806651593;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	95067025	95067124	.	+	.	Name=Height_above_ear;B73v2_pos=6:163466543;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	95212251	95212350	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:85890285;1allele=T/G;version=Hapmap2;RS=rs822807599;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	95470217	95470316	.	+	.	Name=Total_amino_acids;B73v2_pos=6:86139981;1allele=C/A;version=Hapmap2;RS=rs130332829;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	95470817	95470916	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:86140581;1allele=A/T;version=Hapmap2;RS=rs130332844;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	95536134	95536233	.	+	.	Name=Fructose;B73v2_pos=6:86210757;1allele=C/T;version=Hapmap2;RS=rs832818555;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	95578703	95578802	.	+	.	Name=Leaf_length;B73v2_pos=6:86252966;1allele=G/A;version=Hapmap2;RS=rs838677627;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	95640751	95640850	.	+	.	Name=Total_amino_acids;B73v2_pos=6:86342409;1allele=A/C;version=Hapmap1;RS=rs131579590;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	95889731	95889830	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:86586549;1allele=A/G;version=Hapmap2;RS=rs816214457;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	96213023	96213122	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:86897645;1allele=A/G;version=Hapmap2;RS=rs822198002;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	96586623	96586722	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:87278060;1allele=A/C;version=Hapmap1;RS=rs131580242;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	96942525	96942624	.	+	.	Name=Plant_height;B73v2_pos=6:87622517;1allele=T/G;version=Hapmap2;RS=rs804599406;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	97400135	97400234	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:88062617;1allele=T/C;version=Hapmap2;RS=rs725325154;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	98366608	98366707	.	+	.	Name=Total_amino_acids;B73v2_pos=6:88652455;1allele=A/G;version=Hapmap2;RS=rs822713327;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	98394273	98394372	.	+	.	Name=Leaf_length;B73v2_pos=6:88671748;1allele=A/G;version=Hapmap1;RS=rs131581162;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	98429809	98429908	.	+	.	Name=Leaf_length;B73v2_pos=6:88714578;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	98445639	98445738	.	+	.	Name=Plant_height;B73v2_pos=6:88731588;1allele=G/A;version=Hapmap2;RS=rs835238594;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	98458913	98459012	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:88744862;1allele=G/T;version=Hapmap2;RS=rs836011645;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	98459102	98459201	.	+	.	Name=Total_amino_acids;B73v2_pos=6:88745051;1allele=T/A;version=Hapmap2;RS=rs1063286124;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	98612256	98612355	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:88888967;1allele=C/T;version=Hapmap2;RS=rs815774171;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	98819175	98819274	.	+	.	Name=Tassel_length;B73v2_pos=6:89109035;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	98833825	98833924	.	+	.	Name=Total_amino_acids;B73v2_pos=6:89123464;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	98957196	98957295	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:89246095;1allele=A/G;version=Hapmap2;RS=rs818900054;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	99063984	99064083	.	+	.	Name=Tassel_length;B73v2_pos=6:89352501;1allele=G/T;version=Hapmap2;RS=rs825904934;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	99111402	99111501	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:89399942;1allele=T/A;version=Hapmap2;RS=rs803278269;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	99174034	99174133	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:89462582;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	99392974	99393073	.	+	.	Name=Height_above_ear;B73v2_pos=6:89681972;1allele=C/T;version=Hapmap2;RS=rs840362302;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	99392986	99393085	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:89681984;1allele=G/A;version=Hapmap2;RS=rs842304878;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	99400279	99400378	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:89689277;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	99426987	99427086	.	+	.	Name=Ear_row_number;B73v2_pos=6:89715985;1allele=T/C;version=Hapmap2;RS=rs823162023;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	99759500	99759599	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:90040773;1allele=C/T;version=Hapmap2;RS=rs1063034156;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	100049080	100049179	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:90359736;1allele=A/G;version=Hapmap2;RS=rs827385462;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	100056141	100056240	.	+	.	Name=Fructose;B73v2_pos=6:90416778;1allele=A/G;version=Hapmap2;RS=rs810193709;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	100093555	100093654	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:90454194;1allele=C/T;version=Hapmap2;RS=rs821986394;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	100113344	100113443	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:90473984;1allele=A/G;version=Hapmap2;RS=rs278044702;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	100113759	100113858	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:90474399;1allele=A/G;version=Hapmap2;RS=rs130337950;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	100162691	100162790	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:90524883;1allele=C/T;version=Hapmap2;RS=rs840761774;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	100335594	100335693	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:90689398;1allele=T/C;version=Hapmap2;RS=rs822526583;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	100442646	100442745	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:90798771;1allele=T/C;version=Hapmap2;RS=rs803641519;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	100590510	100590609	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:90942886;1allele=G/A;version=Hapmap2;RS=rs130339128;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	100591490	100591589	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:90943866;1allele=G/A;version=Hapmap2;RS=rs816763677;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	100592540	100592639	.	+	.	Name=Nitrate;B73v2_pos=6:90944916;1allele=C/T;version=Hapmap2;RS=rs813405430;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	100604566	100604665	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:90956947;1allele=T/C;version=Hapmap2;RS=rs820924464;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	100615671	100615770	.	+	.	Name=Ear_row_number;B73v2_pos=6:90968053;1allele=G/A;version=Hapmap2;RS=rs1064332443;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	100632704	100632803	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:90985166;1allele=G/A;version=Hapmap2;RS=rs726833280;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	100710976	100711075	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:91063456;1allele=A/G;version=Hapmap2;RS=rs724517654;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	100801972	100802071	.	+	.	Name=Ear_row_number;B73v2_pos=6:91155735;1allele=A/C;version=Hapmap2;RS=rs130339591;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	100890333	100890432	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:91238668;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	100892564	100892663	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:91236437;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	101019114	101019213	.	+	.	Name=Plant_height;B73v2_pos=6:91353896;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	101019114	101019213	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:91353896;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	101019118	101019217	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:91353900;1allele=A/T;version=Hapmap1;RS=rs131582968;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	101277623	101277722	.	+	.	Name=Plant_height;B73v2_pos=6:91566137;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	101304390	101304489	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:91620359;1allele=C/T;version=Hapmap2;RS=rs278045634;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	101331196	101331295	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:91646020;1allele=C/T;version=Hapmap2;RS=rs131583258;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	101403512	101403611	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:91725639;1allele=G/A;version=Hapmap2;RS=rs809403928;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	101426241	101426340	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:91737047;1allele=G/A;version=Hapmap2;RS=rs830804849;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	101478036	101478135	.	+	.	Name=Plant_height;B73v2_pos=6:91778526;1allele=A/G;version=Hapmap2;RS=rs816671827;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	101620426	101620525	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:91921545;1allele=C/T;version=Hapmap2;RS=rs835181834;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	101624591	101624690	.	+	.	Name=Total_amino_acids;B73v2_pos=6:91925713;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	101625282	101625381	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:91926404;1allele=A/G;version=Hapmap2;RS=rs834612644;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	101830942	101831041	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92129650;1allele=G/A;version=Hapmap2;RS=rs828753204;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	101830942	101831041	.	+	.	Name=Plant_height;B73v2_pos=6:92129650;1allele=G/A;version=Hapmap2;RS=rs828753204;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	101836507	101836606	.	+	.	Name=Plant_height;B73v2_pos=6:92135216;1allele=C/T;version=Hapmap2;RS=rs278045925;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	101939607	101939706	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:92227943;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102037550	102037649	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:92360518;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102038122	102038221	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:92359946;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102038735	102038834	.	+	.	Name=Plant_height;B73v2_pos=6:92359333;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102115777	102115876	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92304191;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102190596	102190695	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:92488411;1allele=C/A;version=Hapmap2;RS=rs819752974;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	102196172	102196271	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:92493987;1allele=A/C;version=Hapmap2;RS=rs827895801;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	102217402	102217501	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92528001;1allele=C/T;version=Hapmap2;RS=rs845381696;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	102220968	102221067	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:92531567;1allele=G/A;version=Hapmap2;RS=rs834938388;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	102246317	102246416	.	+	.	Name=Tassel_length;B73v2_pos=6:92510852;1allele=A/G;version=Hapmap2;RS=rs824738237;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	102269805	102269904	.	+	.	Name=Plant_height;B73v2_pos=6:92584814;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102269805	102269904	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92584814;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102271733	102271832	.	+	.	Name=Plant_height;B73v2_pos=6:92582886;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102323328	102323427	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:92617024;1allele=G/A;version=Hapmap2;RS=rs278046164;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	102380414	102380513	.	+	.	Name=Plant_height;B73v2_pos=6:92681594;1allele=G/A;version=Hapmap2;RS=rs812997601;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	102395357	102395456	.	+	.	Name=Plant_height;B73v2_pos=6:92696539;1allele=A/G;version=Hapmap2;RS=rs817679574;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	102395357	102395456	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92696539;1allele=A/G;version=Hapmap2;RS=rs817679574;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	102402339	102402438	.	+	.	Name=Plant_height;B73v2_pos=6:92703521;1allele=A/G;version=Hapmap2;RS=rs815182268;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	102402353	102402452	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92703535;1allele=T/C;version=Hapmap2;RS=rs848364389;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	102402357	102402456	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92703539;1allele=A/C;version=Hapmap2;RS=rs816900094;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	102402357	102402456	.	+	.	Name=Plant_height;B73v2_pos=6:92703539;1allele=A/C;version=Hapmap2;RS=rs816900094;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	102463623	102463722	.	+	.	Name=Plant_height;B73v2_pos=6:92773146;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102525409	102525508	.	+	.	Name=Tassel_length;B73v2_pos=6:92825547;1allele=T/C;version=Hapmap2;RS=rs278046262;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	102525412	102525511	.	+	.	Name=Tassel_length;B73v2_pos=6:92825550;1allele=T/C;version=Hapmap2;RS=rs820070073;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	102569469	102569568	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:92908200;1allele=C/T;version=Hapmap2;RS=rs131584049;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	102701852	102701951	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:93000087;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	102779702	102779801	.	+	.	Name=Tassel_length;B73v2_pos=6:93071794;1allele=C/T;version=Hapmap2;RS=rs817431887;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	102849586	102849685	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:93133371;1allele=A/T;version=Hapmap2;RS=rs845554987;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	102934047	102934146	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:93228352;1allele=G/A;version=Hapmap1;RS=rs847048609;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	102936418	102936517	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:93230723;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103036451	103036550	.	+	.	Name=Total_amino_acids;B73v2_pos=6:93324332;1allele=T/C;version=Hapmap2;RS=rs841074735;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103036805	103036904	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:93324686;1allele=G/T;version=Hapmap2;RS=rs845167762;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	103037400	103037499	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:93325281;1allele=C/T;version=Hapmap2;RS=rs802577681;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	103053629	103053728	.	+	.	Name=Ear_row_number;B73v2_pos=6:93341504;1allele=T/C;version=Hapmap2;RS=rs816002555;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103064397	103064496	.	+	.	Name=Plant_height;B73v2_pos=6:93394895;1allele=T/C;version=Hapmap2;RS=rs807182411;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103085092	103085191	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:93412088;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103088066	103088165	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:93409114;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103127311	103127410	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:93363953;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103137732	103137831	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:93353523;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103141076	103141175	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:93423847;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103153219	103153318	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:93436257;1allele=C/T;version=Hapmap2;RS=rs278046733;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103267203	103267302	.	+	.	Name=Plant_height;B73v2_pos=6:93501247;1allele=T/C;version=Hapmap2;RS=rs840175275;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103270049	103270148	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:93504093;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103358709	103358808	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:93591325;1allele=A/G;version=Hapmap2;RS=rs827508581;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	103358709	103358808	.	+	.	Name=Height_above_ear;B73v2_pos=6:93591325;1allele=A/G;version=Hapmap2;RS=rs827508581;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	103442195	103442294	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:93674809;1allele=G/A;version=Hapmap2;RS=rs835531584;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	103483608	103483707	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:93717140;1allele=A/T;version=Hapmap2;RS=rs822215890;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	103501387	103501486	.	+	.	Name=Tassel_length;B73v2_pos=6:93730351;1allele=T/C;version=Hapmap2;RS=rs278046926;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103501829	103501928	.	+	.	Name=Tassel_length;B73v2_pos=6:93730793;1allele=A/T;version=Hapmap2;RS=rs725260849;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	103502393	103502492	.	+	.	Name=Height_above_ear;B73v2_pos=6:93731357;1allele=/GGAA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103502399	103502498	.	+	.	Name=Height_above_ear;B73v2_pos=6:93731363;1allele=T/C;version=Hapmap1;RS=rs131585374;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103502399	103502498	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:93731363;1allele=T/C;version=Hapmap1;RS=rs131585374;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103532955	103533054	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:93757900;1allele=C/T;version=Hapmap2;RS=rs822240815;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	103561877	103561976	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:93785798;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103562190	103562289	.	+	.	Name=Plant_height;B73v2_pos=6:93786111;1allele=A/C;version=Hapmap2;RS=rs130344399;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	103562874	103562973	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:93786795;1allele=A/G;version=Hapmap2;RS=rs1062809610;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	103563321	103563420	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:93787242;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103616447	103616546	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:93839330;1allele=C/T;version=Hapmap1;RS=rs131585484;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	103685036	103685135	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:93922477;1allele=A/G;version=Hapmap2;RS=rs725414732;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	103697115	103697214	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:93934558;1allele=A/G;version=Hapmap2;RS=rs815135428;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	103747196	103747295	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:93960762;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	103794693	103794792	.	+	.	Name=Plant_height;B73v2_pos=6:94024981;1allele=T/C;version=Hapmap2;RS=rs130344851;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	103796349	103796447	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:94026637;1allele=A/G;version=Hapmap2;RS=rs278047255;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	103802805	103802904	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:94033094;1allele=C/T;version=Hapmap2;RS=rs724277644;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	103820804	103820903	.	+	.	Name=Plant_height;B73v2_pos=6:94046210;1allele=C/T;version=Hapmap2;RS=rs1061951189;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	103921986	103922085	.	+	.	Name=Plant_height;B73v2_pos=6:94147003;1allele=C/T;version=Hapmap2;RS=rs130345112;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	103966595	103966694	.	+	.	Name=Ear_row_number;B73v2_pos=6:94193874;1allele=C/T;version=Hapmap2;RS=rs830241337;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104032824	104032923	.	+	.	Name=Nitrate;B73v2_pos=6:94260126;1allele=G/A;version=Hapmap2;RS=rs823014455;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	104201504	104201603	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:94426562;1allele=C/T;version=Hapmap2;RS=rs813988314;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	104201504	104201603	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94426562;1allele=C/T;version=Hapmap2;RS=rs813988314;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	104201504	104201603	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:94426562;1allele=C/T;version=Hapmap2;RS=rs813988314;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	104260517	104260616	.	+	.	Name=Tassel_length;B73v2_pos=6:94483716;1allele=C/T;version=Hapmap2;RS=rs813944443;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104260717	104260816	.	+	.	Name=Ear_height;B73v2_pos=6:94483916;1allele=G/A;version=Hapmap2;RS=rs803702383;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	104260717	104260816	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94483916;1allele=G/A;version=Hapmap2;RS=rs803702383;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	104260717	104260816	.	+	.	Name=Plant_height;B73v2_pos=6:94483916;1allele=G/A;version=Hapmap2;RS=rs803702383;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	104269427	104269526	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:94492626;1allele=C/G;version=Hapmap2;RS=rs846844835;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	104273407	104273506	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:94496606;1allele=A/G;version=Hapmap2;RS=rs848628800;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	104273407	104273506	.	+	.	Name=Plant_height;B73v2_pos=6:94496606;1allele=A/G;version=Hapmap2;RS=rs848628800;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	104273407	104273506	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94496606;1allele=A/G;version=Hapmap2;RS=rs848628800;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	104275667	104275766	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94498866;1allele=A/G;version=Hapmap2;RS=rs130345497;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	104275740	104275839	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:94498939;1allele=C/A;version=Hapmap1;RS=rs131585759;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	104278041	104278140	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94501239;1allele=T/C;version=Hapmap2;RS=rs130345507;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104296389	104296488	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:94519587;1allele=G/T;version=Hapmap2;RS=rs131585804;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	104383572	104383671	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:94609972;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104387284	104387383	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:94606260;1allele=C/T;version=Hapmap2;RS=rs831316022;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104408520	104408619	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:94624012;1allele=C/T;version=Hapmap2;RS=rs278047743;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104413321	104413420	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:94628813;1allele=G/A;version=Hapmap2;RS=rs849731518;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	104428893	104428992	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:94644361;1allele=C/T;version=Hapmap2;RS=rs840469562;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104431185	104431284	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94646653;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104431485	104431584	.	+	.	Name=Plant_height;B73v2_pos=6:94646953;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104431485	104431584	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94646953;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104434555	104434654	.	+	.	Name=Stalk_strength;B73v2_pos=6:94650023;1allele=C/A;version=Hapmap2;RS=rs818826281;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	104497827	104497926	.	+	.	Name=Protein;B73v2_pos=6:94713201;1allele=A/G;version=Hapmap2;RS=rs834522389;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	104553180	104553279	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:94756483;1allele=G/C;version=Hapmap2;RS=rs849620599;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	104553551	104553650	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:94756854;1allele=A/G;version=Hapmap2;RS=rs809702097;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	104554684	104554783	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:94757987;1allele=T/G;version=Hapmap2;RS=rs847580711;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	104556180	104556279	.	+	.	Name=Plant_height;B73v2_pos=6:94759483;1allele=C/A;version=Hapmap2;RS=rs131586136;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	104558192	104558291	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:94761495;1allele=CGA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104586281	104586380	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:94789229;1allele=C/T;version=Hapmap2;RS=rs811981087;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104589461	104589560	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:94792411;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104623174	104623273	.	+	.	Name=Height_above_ear;B73v2_pos=6:94823602;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104656750	104656849	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94855346;1allele=C/T;version=Hapmap1;RS=rs131586310;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104674190	104674289	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:94872635;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104694627	104694726	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:94901607;1allele=G/T;version=Hapmap2;RS=rs1063076071;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	104718876	104718975	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:94949370;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104743111	104743210	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:94954092;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104743111	104743210	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:94954092;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104743247	104743346	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:94954228;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104755247	104755346	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:94967019;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	104779267	104779366	.	+	.	Name=Stalk_strength;B73v2_pos=6:94992547;1allele=C/T;version=Hapmap2;RS=rs817551643;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104810243	104810342	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95016418;1allele=C/T;version=Hapmap2;RS=rs810753736;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104826647	104826746	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:95032373;1allele=C/T;version=Hapmap2;RS=rs130346145;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104826789	104826888	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95032515;1allele=C/T;version=Hapmap2;RS=rs846780983;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104826794	104826893	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95032520;1allele=A/T;version=Hapmap2;RS=rs805646224;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	104856007	104856106	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95061823;1allele=T/G;version=Hapmap2;RS=rs806758363;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	104856081	104856180	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95061897;1allele=C/G;version=Hapmap2;RS=rs821912289;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	104856085	104856184	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:95061901;1allele=T/C;version=Hapmap2;RS=rs831950353;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104857221	104857320	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95063037;1allele=C/T;version=Hapmap2;RS=rs1061574481;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104857221	104857320	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95063037;1allele=C/T;version=Hapmap2;RS=rs1061574481;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104857221	104857320	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:95063037;1allele=C/T;version=Hapmap2;RS=rs1061574481;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	104861508	104861607	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95067324;1allele=A/G;version=Hapmap1;RS=rs131586388;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105105455	105105554	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95307190;1allele=G/A;version=Hapmap2;RS=rs808842310;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105106095	105106194	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95307831;1allele=C/T;version=Hapmap2;RS=rs827175772;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105119469	105119568	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95321205;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105120476	105120575	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95322212;1allele=C/T;version=Hapmap2;RS=rs849934342;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105121364	105121463	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95323100;1allele=C/A;version=Hapmap1;RS=rs131586579;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	105121800	105121899	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95323536;1allele=G/A;version=Hapmap2;RS=rs278048124;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105122339	105122438	.	+	.	Name=Plant_height;B73v2_pos=6:95324075;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105125770	105125869	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95327506;1allele=C/G;version=Hapmap1;RS=rs805059666;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	105125907	105126006	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95327643;1allele=G/A;version=Hapmap2;RS=rs839821252;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105126107	105126206	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95327843;1allele=T/C;version=Hapmap2;RS=rs131586636;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	105203981	105204080	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95350593;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105225425	105225524	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95403188;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105225624	105225723	.	+	.	Name=Height_above_ear;B73v2_pos=6:95402989;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105225624	105225723	.	+	.	Name=Plant_height;B73v2_pos=6:95402989;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105225624	105225723	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95402989;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105226176	105226275	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95402437;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105230835	105230934	.	+	.	Name=Leaf_length;B73v2_pos=6:95397778;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105255224	105255323	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95373387;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105274718	105274817	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95424617;1allele=T/A;version=Hapmap2;RS=rs847643606;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	105300888	105300987	.	+	.	Name=Height_above_ear;B73v2_pos=6:95439986;1allele=C/T;version=Hapmap2;RS=rs834598457;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	105300888	105300987	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95439986;1allele=C/T;version=Hapmap2;RS=rs834598457;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	105319172	105319271	.	+	.	Name=Stalk_strength;B73v2_pos=6:95458271;1allele=C/G;version=Hapmap2;RS=rs130346719;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	105319318	105319417	.	+	.	Name=Leaf_length;B73v2_pos=6:95458417;1allele=T/C;version=Hapmap2;RS=rs826643519;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	105320589	105320688	.	+	.	Name=Stalk_strength;B73v2_pos=6:95459688;1allele=G/A;version=Hapmap2;RS=rs130346728;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105330065	105330164	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95469164;1allele=G/A;version=Hapmap2;RS=rs1064423010;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105498463	105498562	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95602775;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105499170	105499269	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95602068;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105499183	105499282	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:95602055;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105534281	105534380	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95674698;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105534289	105534388	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95674706;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105534299	105534398	.	+	.	Name=Height_above_ear;B73v2_pos=6:95674716;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105534507	105534606	.	+	.	Name=Height_above_ear;B73v2_pos=6:95674924;1allele=T/A;version=Hapmap2;RS=rs278048518;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	105534693	105534792	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95675110;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105534693	105534792	.	+	.	Name=Height_above_ear;B73v2_pos=6:95675110;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105534742	105534841	.	+	.	Name=Height_above_ear;B73v2_pos=6:95675159;1allele=G/C;version=Hapmap1;RS=rs130347286;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	105534742	105534841	.	+	.	Name=Plant_height;B73v2_pos=6:95675159;1allele=G/C;version=Hapmap1;RS=rs130347286;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	105535089	105535188	.	+	.	Name=Plant_height;B73v2_pos=6:95675506;1allele=TTT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105535090	105535189	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95675507;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105535090	105535189	.	+	.	Name=Plant_height;B73v2_pos=6:95675507;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105535444	105535543	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95675861;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105550245	105550344	.	+	.	Name=Height_above_ear;B73v2_pos=6:95684163;1allele=T/C;version=Hapmap2;RS=rs811648513;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105550245	105550344	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95684163;1allele=T/C;version=Hapmap2;RS=rs811648513;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105564400	105564499	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:95698318;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105574153	105574252	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95707253;1allele=C/T;version=Hapmap2;RS=rs823734944;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105582740	105582839	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:95715840;1allele=C/A;version=Hapmap2;RS=rs835542143;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	105582749	105582848	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:95715849;1allele=C/T;version=Hapmap2;RS=rs837688689;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105587053	105587152	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:95720047;1allele=G/A;version=Hapmap2;RS=rs843325649;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105587081	105587180	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95720075;1allele=C/T;version=Hapmap2;RS=rs834091794;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105587081	105587180	.	+	.	Name=Plant_height;B73v2_pos=6:95720075;1allele=C/T;version=Hapmap2;RS=rs834091794;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105588958	105589057	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95722334;1allele=T/C;version=Hapmap2;RS=rs840365347;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105588958	105589057	.	+	.	Name=Plant_height;B73v2_pos=6:95722334;1allele=T/C;version=Hapmap2;RS=rs840365347;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105589788	105589885	.	+	.	Name=Total_amino_acids;B73v2_pos=6:95723164;1allele=A/G;version=Hapmap2;RS=rs278048634;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105591680	105591779	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95725061;1allele=G/A;version=Hapmap2;RS=rs130347560;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105591680	105591779	.	+	.	Name=Plant_height;B73v2_pos=6:95725061;1allele=G/A;version=Hapmap2;RS=rs130347560;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105592576	105592675	.	+	.	Name=Total_amino_acids;B73v2_pos=6:95725957;1allele=A/G;version=Hapmap2;RS=rs278048652;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105592962	105593061	.	+	.	Name=Total_amino_acids;B73v2_pos=6:95726343;1allele=A/G;version=Hapmap2;RS=rs1062754071;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105596151	105596250	.	+	.	Name=Plant_height;B73v2_pos=6:95729532;1allele=G/A;version=Hapmap2;RS=rs130347583;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105598356	105598455	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95731737;1allele=A/G;version=Hapmap2;RS=rs808909987;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105598356	105598455	.	+	.	Name=Plant_height;B73v2_pos=6:95731737;1allele=A/G;version=Hapmap2;RS=rs808909987;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105598590	105598689	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95731971;1allele=G/A;version=Hapmap2;RS=rs809517863;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105598590	105598689	.	+	.	Name=Plant_height;B73v2_pos=6:95731971;1allele=G/A;version=Hapmap2;RS=rs809517863;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105598777	105598876	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95732158;1allele=A/G;version=Hapmap2;RS=rs130347612;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105598777	105598876	.	+	.	Name=Plant_height;B73v2_pos=6:95732158;1allele=A/G;version=Hapmap2;RS=rs130347612;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	105607549	105607648	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95740931;1allele=C/T;version=Hapmap2;RS=rs844498847;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105636439	105636538	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95768900;1allele=G/T;version=Hapmap2;RS=rs727113347;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	105638465	105638564	.	+	.	Name=Plant_height;B73v2_pos=6:95770926;1allele=G/A;version=Hapmap2;RS=rs819779325;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105679826	105679925	.	+	.	Name=Total_amino_acids;B73v2_pos=6:95809524;1allele=T/C;version=Hapmap2;RS=rs278048788;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105724877	105724976	.	+	.	Name=Plant_height;B73v2_pos=6:95887206;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105778222	105778321	.	+	.	Name=Ear_height;B73v2_pos=6:95840951;1allele=C/T;version=Hapmap2;RS=rs846342038;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105778760	105778859	.	+	.	Name=Plant_height;B73v2_pos=6:95841489;1allele=C/T;version=Hapmap2;RS=rs805326855;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105778760	105778859	.	+	.	Name=Ear_height;B73v2_pos=6:95841489;1allele=C/T;version=Hapmap2;RS=rs805326855;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105802174	105802273	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:95912564;1allele=G/A;version=Hapmap2;RS=rs726083396;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105808003	105808102	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95918393;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105813184	105813283	.	+	.	Name=Plant_height;B73v2_pos=6:95923574;1allele=C/T;version=Hapmap2;RS=rs812281668;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105813220	105813319	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:95923610;1allele=C/T;version=Hapmap2;RS=rs829462109;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105815332	105815431	.	+	.	Name=Cob_diameter;B73v2_pos=6:95925722;1allele=C/T;version=Hapmap2;RS=rs130347994;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	105817045	105817144	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:95927435;1allele=G/A;version=Hapmap2;RS=rs802793625;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	105817128	105817227	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:95927518;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	105818150	105818249	.	+	.	Name=Plant_height;B73v2_pos=6:95928540;1allele=T/C;version=Hapmap2;RS=rs726627668;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	105818150	105818249	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95928540;1allele=T/C;version=Hapmap2;RS=rs726627668;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	105818158	105818257	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:95928548;1allele=G/A;version=Hapmap2;RS=rs725186660;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105818158	105818257	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95928548;1allele=G/A;version=Hapmap2;RS=rs725186660;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105820906	105821005	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:95931296;1allele=A/G;version=Hapmap2;RS=rs130348049;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105820906	105821005	.	+	.	Name=Plant_height;B73v2_pos=6:95931296;1allele=A/G;version=Hapmap2;RS=rs130348049;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	105920905	105921004	.	+	.	Name=Stalk_strength;B73v2_pos=6:96036458;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106062497	106062596	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96173105;1allele=G/C;version=Hapmap2;RS=rs278049104;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106208694	106208793	.	+	.	Name=Leaf_width;B73v2_pos=6:96314505;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106224850	106224949	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:96330661;1allele=G/C;version=Hapmap1;RS=rs841058361;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106224967	106225066	.	+	.	Name=Plant_height;B73v2_pos=6:96330778;1allele=G/C;version=Hapmap2;RS=rs814863111;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106226464	106226563	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:96332275;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106226480	106226579	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:96332291;1allele=T/G;version=Hapmap2;RS=rs807582711;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	106227101	106227200	.	+	.	Name=Leaf_length;B73v2_pos=6:96332912;1allele=C/A;version=Hapmap2;RS=rs130348520;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	106232236	106232335	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:96338047;1allele=A/G;version=Hapmap2;RS=rs130348530;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	106242356	106242455	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:96348169;1allele=G/A;version=Hapmap2;RS=rs802570339;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	106439960	106440059	.	+	.	Name=Plant_height;B73v2_pos=6:96538026;1allele=T/C;version=Hapmap1;RS=rs131587718;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	106439960	106440059	.	+	.	Name=Ear_height;B73v2_pos=6:96538026;1allele=T/C;version=Hapmap1;RS=rs131587718;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	106440421	106440512	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96538474;1allele=C/G;version=Hapmap2;RS=rs278049250;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106440421	106440512	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:96538474;1allele=C/G;version=Hapmap2;RS=rs278049250;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106440421	106440512	.	+	.	Name=Plant_height;B73v2_pos=6:96538474;1allele=C/G;version=Hapmap2;RS=rs278049250;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106442798	106442897	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96540859;1allele=G/C;version=Hapmap1;RS=rs848023395;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106443169	106443268	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96541230;1allele=/CAGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106450583	106450682	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:96548480;1allele=T/C;version=Hapmap2;RS=rs802360846;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	106450949	106451048	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96548846;1allele=G/T;version=Hapmap2;RS=rs130348592;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	106453422	106453521	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:96551319;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106468239	106468338	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96566136;1allele=G/C;version=Hapmap2;RS=rs130348633;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	106548567	106548666	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:96657403;1allele=C/G;version=Hapmap2;RS=rs832127751;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	106559039	106559138	.	+	.	Name=Plant_height;B73v2_pos=6:96667863;1allele=C/T;version=Hapmap1;RS=rs131587854;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	106559199	106559298	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96668023;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106563615	106563714	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96672498;1allele=G/A;version=Hapmap2;RS=rs847571761;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	106565658	106565757	.	+	.	Name=Total_amino_acids;B73v2_pos=6:96674541;1allele=C/G;version=Hapmap1;RS=rs131587940;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	106711215	106711314	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:96812831;1allele=/GCAA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106795135	106795234	.	+	.	Name=Height_above_ear;B73v2_pos=6:96902593;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	106810001	106810100	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:96917459;1allele=A/G;version=Hapmap2;RS=rs843594591;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	106994400	106994499	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97098368;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107015905	107016004	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:97119873;1allele=T/C;version=Hapmap2;RS=rs849261829;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	107016844	107016943	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:97120812;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107119744	107119843	.	+	.	Name=Height_above_ear;B73v2_pos=6:97226720;1allele=G/A;version=Hapmap1;RS=rs131588472;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	107125295	107125394	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:97232271;1allele=C/A;version=Hapmap2;RS=rs727356306;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	107208249	107208348	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97319895;1allele=TGA/;version=Hapmap1;RS=rs819362865;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	107243753	107243852	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:97341675;1allele=-/+;version=Hapmap2;RS=rs1062257863;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	107244357	107244456	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97342279;1allele=G/A;version=Hapmap1;RS=rs130349467;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	107248395	107248494	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97346317;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107341702	107341801	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97409679;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107358429	107358528	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97457839;1allele=T/C;version=Hapmap2;RS=rs828270806;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	107460423	107460522	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97560373;1allele=G/A;version=Hapmap2;RS=rs829356835;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	107591085	107591184	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:97667616;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107625816	107625915	.	+	.	Name=Stalk_strength;B73v2_pos=6:97731021;1allele=A/C;version=Hapmap2;RS=rs814668783;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	107668688	107668787	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:97773895;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107698362	107698461	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:97803574;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107763264	107763363	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:97862005;1allele=C/T;version=Hapmap2;RS=rs130350480;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	107776932	107777031	.	+	.	Name=Fructose;B73v2_pos=6:97875044;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	107866563	107866662	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:97965974;1allele=G/T;version=Hapmap2;RS=rs839254857;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	107914268	107914367	.	+	.	Name=Plant_height;B73v2_pos=6:98013680;1allele=G/A;version=Hapmap2;RS=rs278050472;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	107928126	107928225	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:98027539;1allele=T/C;version=Hapmap2;RS=rs836379990;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	107985201	107985300	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:98090366;1allele=G/C;version=Hapmap2;RS=rs806231052;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	107986077	107986176	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:98091242;1allele=C/G;version=Hapmap1;RS=rs131589455;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	108149121	108149220	.	+	.	Name=Plant_height;B73v2_pos=6:98249079;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	108232816	108232915	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:98329628;1allele=C/T;version=Hapmap2;RS=rs811422950;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	108625364	108625463	.	+	.	Name=Leaf_length;B73v2_pos=6:98691075;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	108760595	108760694	.	+	.	Name=Leaf_length;B73v2_pos=6:98837429;1allele=T/C;version=Hapmap2;RS=rs815992533;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	109914933	109915032	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:99801032;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	109987659	109987758	.	+	.	Name=Plant_height;B73v2_pos=6:99775442;1allele=A/G;version=Hapmap2;RS=rs278051739;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	110262730	110262829	.	+	.	Name=Leaf_length;B73v2_pos=6:100054719;1allele=T/C;version=Hapmap2;RS=rs849303895;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	110293752	110293851	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:100085759;1allele=C/T;version=Hapmap2;RS=rs278052277;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	110296744	110296843	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:100088751;1allele=A/G;version=Hapmap2;RS=rs838129026;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	110404785	110404884	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:100146948;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	110476268	110476367	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:100270065;1allele=G/A;version=Hapmap2;RS=rs1063170466;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	110477165	110477264	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:100270962;1allele=A/G;version=Hapmap2;RS=rs278052771;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	110506576	110506675	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:100298843;1allele=C/A;version=Hapmap2;RS=rs278052855;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	110506723	110506822	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:100298990;1allele=G/A;version=Hapmap2;RS=rs278052859;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	110513014	110513113	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:100305286;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	110567211	110567310	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:100350441;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	110569513	110569612	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:100348139;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	111507573	111507672	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:101142853;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	111642009	111642108	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:101312349;1allele=T/G;version=Hapmap2;RS=rs841768834;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	112268459	112268558	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:101964891;1allele=C/T;version=Hapmap2;RS=rs805793563;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	112369798	112369897	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:102066228;1allele=C/T;version=Hapmap2;RS=rs838141827;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	112446354	112446453	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:102157300;1allele=G/A;version=Hapmap2;RS=rs132306368;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	112598537	112598636	.	+	.	Name=Total_amino_acids;B73v2_pos=6:102346745;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	112990097	112990196	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=6:102744815;1allele=C/A;version=Hapmap1;RS=rs132307032;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	113004592	113004691	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:102759310;1allele=C/A;version=Hapmap2;RS=rs130357141;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	113010068	113010167	.	+	.	Name=Total_amino_acids;B73v2_pos=6:102764786;1allele=C/T;version=Hapmap2;RS=rs130357199;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	113070957	113071056	.	+	.	Name=Total_amino_acids;B73v2_pos=6:102825101;1allele=T/C;version=Hapmap2;RS=rs1064076494;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	113097863	113097962	.	+	.	Name=Total_amino_acids;B73v2_pos=6:102856305;1allele=T/C;version=Hapmap2;RS=rs130357383;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	113203001	113203100	.	+	.	Name=Stalk_strength;B73v2_pos=6:102952910;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113376531	113376630	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:103139443;1allele=C/T;version=Hapmap2;RS=rs820695152;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	113458284	113458383	.	+	.	Name=Leaf_length;B73v2_pos=6:103221415;1allele=A/G;version=Hapmap2;RS=rs830166040;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	113458657	113458756	.	+	.	Name=Total_amino_acids;B73v2_pos=6:103221788;1allele=A/T;version=Hapmap2;RS=rs278057839;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	113476670	113476769	.	+	.	Name=Total_amino_acids;B73v2_pos=6:103292208;1allele=C/T;version=Hapmap2;RS=rs814167009;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	113476744	113476843	.	+	.	Name=Total_amino_acids;B73v2_pos=6:103292134;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113523796	113523895	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:103244394;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113556355	113556454	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:103315056;1allele=T/C;version=Hapmap2;RS=rs808072702;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	113559050	113559149	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:103317751;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113561572	113561671	.	+	.	Name=Leaf_width;B73v2_pos=6:103320273;1allele=T/C;version=Hapmap2;RS=rs845305730;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	113603854	113603953	.	+	.	Name=Leaf_length;B73v2_pos=6:103360496;1allele=AGC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113651425	113651524	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:103406145;1allele=C/T;version=Hapmap2;RS=rs132307787;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	113653825	113653924	.	+	.	Name=Total_amino_acids;B73v2_pos=6:103408545;1allele=G/A;version=Hapmap2;RS=rs130357958;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	113657587	113657686	.	+	.	Name=Total_amino_acids;B73v2_pos=6:103412307;1allele=G/A;version=Hapmap2;RS=rs1063697557;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	113737513	113737612	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:103456315;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113758595	113758694	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:103492508;1allele=G/A;version=Hapmap2;RS=rs811913992;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	113775917	113776016	.	+	.	Name=Ear_height;B73v2_pos=6:103509837;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113787619	113787718	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:103521539;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113892037	113892136	.	+	.	Name=Stalk_strength;B73v2_pos=6:103606953;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	113895714	113895813	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:103610630;1allele=C/T;version=Hapmap2;RS=rs846501179;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	113896026	113896125	.	+	.	Name=Plant_height;B73v2_pos=6:103610942;1allele=G/T;version=Hapmap2;RS=rs806948546;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	113896026	113896125	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:103610942;1allele=G/T;version=Hapmap2;RS=rs806948546;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	113907062	113907161	.	+	.	Name=Plant_height;B73v2_pos=6:103636347;1allele=G/T;version=Hapmap2;RS=rs822418632;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	113907759	113907858	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:103637044;1allele=A/G;version=Hapmap2;RS=rs278058305;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	113933108	113933207	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:103680784;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	114201960	114202059	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:103922736;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	114254653	114254752	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:103948322;1allele=A/G;version=Hapmap2;RS=rs840483555;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	114280075	114280174	.	+	.	Name=Leaf_length;B73v2_pos=6:103973752;1allele=G/A;version=Hapmap2;RS=rs840739097;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	114326498	114326597	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:104019786;1allele=G/C;version=Hapmap2;RS=rs814711399;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	114537415	114537514	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:104207628;1allele=T/C;version=Hapmap2;RS=rs813361602;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	114548569	114548668	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:104219706;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	114663978	114664077	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:104343624;1allele=C/G;version=Hapmap2;RS=rs849010424;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	114762278	114762377	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:104439428;1allele=G/A;version=Hapmap2;RS=rs827984238;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	114773976	114774075	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:104451126;1allele=G/A;version=Hapmap2;RS=rs130359555;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	114778385	114778484	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:104455535;1allele=C/T;version=Hapmap2;RS=rs130359589;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	114778548	114778647	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:104455698;1allele=C/A;version=Hapmap2;RS=rs802691246;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	115162772	115162871	.	+	.	Name=Leaf_length;B73v2_pos=6:104838261;1allele=A/G;version=Hapmap2;RS=rs839325540;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	115388553	115388652	.	+	.	Name=Leaf_length;B73v2_pos=6:105057920;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	115423413	115423512	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:105101016;1allele=A/C;version=Hapmap2;RS=rs845127219;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	115535176	115535275	.	+	.	Name=Leaf_length;B73v2_pos=6:105212511;1allele=T/G;version=Hapmap2;RS=rs820652475;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	115661274	115661373	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105337551;1allele=G/T;version=Hapmap2;RS=rs835585090;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	115663315	115663414	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105339592;1allele=T/C;version=Hapmap2;RS=rs824481985;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	115740336	115740435	.	+	.	Name=Stalk_strength;B73v2_pos=6:105408349;1allele=G/A;version=Hapmap1;RS=rs821094170;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	115778141	115778240	.	+	.	Name=Total_amino_acids;B73v2_pos=6:105426087;1allele=G/T;version=Hapmap2;RS=rs278059870;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	115845969	115846068	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105498935;1allele=A/C;version=Hapmap2;RS=rs278059996;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	115875519	115875618	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:105538817;1allele=C/G;version=Hapmap1;RS=rs132309766;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	115884270	115884369	.	+	.	Name=Total_amino_acids;B73v2_pos=6:105547568;1allele=G/A;version=Hapmap2;RS=rs278060032;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	115930692	115930791	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:105592614;1allele=G/T;version=Hapmap2;RS=rs130361772;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	116027899	116027998	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:105683025;1allele=T/C;version=Hapmap2;RS=rs1063669777;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	116033545	116033644	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105688912;1allele=G/A;version=Hapmap2;RS=rs808787780;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	116086350	116086449	.	+	.	Name=Leaf_width;B73v2_pos=6:105741911;1allele=T/C;version=Hapmap2;RS=rs1064218832;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	116130961	116131060	.	+	.	Name=Leaf_length;B73v2_pos=6:105786887;1allele=C/T;version=Hapmap2;RS=rs829040917;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	116185463	116185562	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105843564;1allele=C/T;version=Hapmap2;RS=rs848774673;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	116263614	116263713	.	+	.	Name=Total_amino_acids;B73v2_pos=6:105954555;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	116289598	116289697	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105969822;1allele=T/C;version=Hapmap2;RS=rs812676910;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	116299841	116299940	.	+	.	Name=Leaf_length;B73v2_pos=6:105927537;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	116302238	116302337	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105925140;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	116329105	116329204	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:105985115;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	116389757	116389856	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:106045869;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	116404138	116404237	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:106060258;1allele=G/T;version=Hapmap2;RS=rs132310251;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	116404964	116405063	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:106061084;1allele=G/A;version=Hapmap2;RS=rs823136319;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	116406271	116406370	.	+	.	Name=Leaf_length;B73v2_pos=6:106062391;1allele=C/G;version=Hapmap2;RS=rs830130604;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	116406298	116406397	.	+	.	Name=Leaf_length;B73v2_pos=6:106062418;1allele=G/A;version=Hapmap2;RS=rs817723087;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	116407298	116407397	.	+	.	Name=Leaf_length;B73v2_pos=6:106063418;1allele=A/T;version=Hapmap2;RS=rs130362211;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	116411680	116411779	.	+	.	Name=Leaf_length;B73v2_pos=6:106067800;1allele=G/A;version=Hapmap2;RS=rs840903926;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	116412317	116412416	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:106068437;1allele=G/T;version=Hapmap2;RS=rs825526640;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	116444853	116444952	.	+	.	Name=Stalk_strength;B73v2_pos=6:106154404;1allele=G/C;version=Hapmap2;RS=rs812315568;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	116501882	116501981	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:106149067;1allele=G/A;version=Hapmap2;RS=rs819590690;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	116589054	116589153	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:106222051;1allele=A/C;version=Hapmap1;RS=rs131179343;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	116646206	116646305	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:106300534;1allele=G/T;version=Hapmap2;RS=rs834390366;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	116700233	116700332	.	+	.	Name=Stalk_strength;B73v2_pos=6:106424680;1allele=T/C;version=Hapmap2;RS=rs826658315;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	116706903	116707002	.	+	.	Name=Stalk_strength;B73v2_pos=6:106431350;1allele=A/G;version=Hapmap2;RS=rs130362824;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	116716683	116716782	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:106441130;1allele=C/T;version=Hapmap2;RS=rs821739140;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	116786075	116786174	.	+	.	Name=Stalk_strength;B73v2_pos=6:106341843;1allele=+/-;version=Hapmap2;RS=rs805593975;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	117069469	117069568	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:106671938;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	117186084	117186183	.	+	.	Name=Stalk_strength;B73v2_pos=6:109997894;1allele=T/C;version=Hapmap2;RS=rs130363129;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	117186134	117186233	.	+	.	Name=Stalk_strength;B73v2_pos=6:109997944;1allele=C/T;version=Hapmap2;RS=rs1062978238;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	117186164	117186263	.	+	.	Name=Stalk_strength;B73v2_pos=6:109997974;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	117196606	117196705	.	+	.	Name=Stalk_strength;B73v2_pos=6:110008413;1allele=C/T;version=Hapmap2;RS=rs836454203;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	117197525	117197624	.	+	.	Name=Stalk_strength;B73v2_pos=6:110009332;1allele=C/T;version=Hapmap2;RS=rs130363186;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	117199785	117199884	.	+	.	Name=Stalk_strength;B73v2_pos=6:110011592;1allele=G/A;version=Hapmap2;RS=rs278065432;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	117217922	117218021	.	+	.	Name=Stalk_strength;B73v2_pos=6:110029729;1allele=G/A;version=Hapmap2;RS=rs130363308;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	117308756	117308855	.	+	.	Name=Stalk_strength;B73v2_pos=6:110114081;1allele=G/T;version=Hapmap2;RS=rs725650202;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	117369571	117369670	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:110205828;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	117416158	117416257	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:110160083;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	117597370	117597469	.	+	.	Name=Total_amino_acids;B73v2_pos=6:110391977;1allele=C/T;version=Hapmap2;RS=rs1062731940;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	117617663	117617762	.	+	.	Name=Total_amino_acids;B73v2_pos=6:110412271;1allele=A/G;version=Hapmap2;RS=rs278065718;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	117915991	117916090	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:110669381;1allele=G/A;version=Hapmap2;RS=rs815342084;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	117941719	117941818	.	+	.	Name=Total_amino_acids;B73v2_pos=6:110694554;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	118029631	118029730	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:110787976;1allele=C/T;version=Hapmap2;RS=rs803168758;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	118244542	118244641	.	+	.	Name=Ear_height;B73v2_pos=6:110994050;1allele=G/C;version=Hapmap2;RS=rs843691616;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	118266145	118266244	.	+	.	Name=Ear_height;B73v2_pos=6:111015663;1allele=G/A;version=Hapmap2;RS=rs1061837047;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	118348876	118348975	.	+	.	Name=Stalk_strength;B73v2_pos=6:111096225;1allele=C/T;version=Hapmap2;RS=rs828570658;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	118455995	118456094	.	+	.	Name=Stalk_strength;B73v2_pos=6:106837196;1allele=G/A;version=Hapmap2;RS=rs844864886;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	118456233	118456332	.	+	.	Name=Stalk_strength;B73v2_pos=6:106837434;1allele=G/A;version=Hapmap2;RS=rs834222347;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	118574152	118574251	.	+	.	Name=Days_to_silk;B73v2_pos=6:106964750;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	118585007	118585106	.	+	.	Name=Days_to_silk;B73v2_pos=6:106975608;1allele=A/C;version=Hapmap2;RS=rs825320024;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	118609457	118609556	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:153182882;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	118646622	118646721	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107037228;1allele=A/T;version=Hapmap2;RS=rs130366711;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	118648894	118648993	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107039500;1allele=T/C;version=Hapmap2;RS=rs836029666;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	118650950	118651049	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107041556;1allele=A/G;version=Hapmap2;RS=rs130366753;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	118651075	118651174	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107041681;1allele=A/G;version=Hapmap2;RS=rs130366756;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	118653639	118653738	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107044697;1allele=G/A;version=Hapmap2;RS=rs130366763;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	118654059	118654158	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107045117;1allele=G/T;version=Hapmap2;RS=rs130366767;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	118654458	118654557	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107045516;1allele=G/A;version=Hapmap2;RS=rs130366772;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	118655795	118655894	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107046853;1allele=G/A;version=Hapmap2;RS=rs1061836484;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	118702813	118702912	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:107093794;1allele=G/A;version=Hapmap2;RS=rs727277946;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	118823700	118823799	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:107217589;1allele=G/C;version=Hapmap2;RS=rs130367146;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	119415261	119415360	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:107809866;1allele=G/A;version=Hapmap1;RS=rs130367648;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	119638714	119638813	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:108079587;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	119667502	119667601	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:108108377;1allele=C/A;version=Hapmap2;RS=rs804396634;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	119684782	119684881	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:108125659;1allele=G/A;version=Hapmap2;RS=rs807848673;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	119684782	119684881	.	+	.	Name=Ear_height;B73v2_pos=6:108125659;1allele=G/A;version=Hapmap2;RS=rs807848673;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	119750357	119750456	.	+	.	Name=Leaf_length;B73v2_pos=6:108142238;1allele=C/T;version=Hapmap2;RS=rs805630464;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	119874049	119874148	.	+	.	Name=Total_amino_acids;B73v2_pos=6:108253609;1allele=G/A;version=Hapmap2;RS=rs831354567;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	119882269	119882368	.	+	.	Name=Leaf_width;B73v2_pos=6:108261829;1allele=C/T;version=Hapmap2;RS=rs840974501;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	119954314	119954413	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:108333876;1allele=A/T;version=Hapmap2;RS=rs724195454;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	120148522	120148621	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:108527525;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	120648774	120648873	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:109017415;1allele=C/T;version=Hapmap2;RS=rs811915953;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	120656772	120656871	.	+	.	Name=Total_amino_acids;B73v2_pos=6:109025413;1allele=C/T;version=Hapmap2;RS=rs830611427;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	120667768	120667867	.	+	.	Name=Ear_height;B73v2_pos=6:109035652;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	120685587	120685686	.	+	.	Name=Ear_height;B73v2_pos=6:109051487;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	120686924	120687023	.	+	.	Name=Total_amino_acids;B73v2_pos=6:109052824;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	120716832	120716931	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:109082735;1allele=A/G;version=Hapmap2;RS=rs832044258;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	120884923	120885022	.	+	.	Name=Ear_height;B73v2_pos=6:109248461;1allele=G/C;version=Hapmap1;RS=rs130370051;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	120904563	120904662	.	+	.	Name=Leaf_width;B73v2_pos=6:109268507;1allele=T/A;version=Hapmap2;RS=rs811687727;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	120905116	120905215	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:109269060;1allele=+/-;version=Hapmap2;RS=rs846642877;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	120952750	120952849	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:109316556;1allele=G/T;version=Hapmap2;RS=rs811695197;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	120954009	120954108	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:109317815;1allele=C/A;version=Hapmap2;RS=rs839778893;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	121213456	121213555	.	+	.	Name=Leaf_width;B73v2_pos=6:109595821;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	121277362	121277461	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:109532186;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	121485179	121485278	.	+	.	Name=Leaf_length;B73v2_pos=6:109841094;1allele=A/G;version=Hapmap2;RS=rs828252658;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	121526299	121526398	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:109882224;1allele=T/G;version=Hapmap1;RS=rs130370911;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	121694839	121694938	.	+	.	Name=Leaf_width;B73v2_pos=6:111705303;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	121835006	121835105	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:111559894;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	122140176	122140275	.	+	.	Name=Leaf_width;B73v2_pos=6:111249814;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	122709189	122709288	.	+	.	Name=Leaf_width;B73v2_pos=6:111920096;1allele=C/T;version=Hapmap1;RS=rs132315050;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	122728444	122728543	.	+	.	Name=Leaf_width;B73v2_pos=6:111939294;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	122756386	122756485	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:111965030;1allele=C/T;version=Hapmap2;RS=rs847968670;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	122775442	122775541	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:162101263;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	122984861	122984960	.	+	.	Name=Ear_height;B73v2_pos=6:112192857;1allele=G/A;version=Hapmap2;RS=rs130371659;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	123576180	123576279	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:112747915;1allele=C/T;version=Hapmap2;RS=rs843641412;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	123614737	123614836	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:112811374;1allele=A/G;version=Hapmap2;RS=rs804834197;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	123704588	123704687	.	+	.	Name=Leaf_width;B73v2_pos=6:112865839;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	123707508	123707607	.	+	.	Name=Leaf_width;B73v2_pos=6:112862919;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	123727762	123727861	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:112840385;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	123727999	123728098	.	+	.	Name=Leaf_width;B73v2_pos=6:112840148;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	123750275	123750374	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:112952010;1allele=A/C;version=Hapmap1;RS=rs130372346;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	123756446	123756545	.	+	.	Name=Leaf_width;B73v2_pos=6:112958181;1allele=C/G;version=Hapmap1;RS=rs132315986;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	123772639	123772738	.	+	.	Name=Height_above_ear;B73v2_pos=6:112974296;1allele=C/T;version=Hapmap2;RS=rs826912239;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	123822886	123822985	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:113085583;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	123824884	123824983	.	+	.	Name=Height_above_ear;B73v2_pos=6:113035068;1allele=C/T;version=Hapmap2;RS=rs278069304;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	123830152	123830251	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:113040333;1allele=G/A;version=Hapmap2;RS=rs130372460;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	124081454	124081552	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:113277897;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	124512626	124512725	.	+	.	Name=Leaf_width;B73v2_pos=6:113686823;1allele=T/C;version=Hapmap2;RS=rs803102518;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	124894327	124894426	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:114043202;1allele=C/T;version=Hapmap2;RS=rs831243792;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	125202531	125202630	.	+	.	Name=Leaf_width;B73v2_pos=6:114372664;1allele=T/C;version=Hapmap2;RS=rs132316812;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	125702979	125703078	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:114849130;1allele=C/G;version=Hapmap2;RS=rs130374354;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	125702979	125703078	.	+	.	Name=Height_above_ear;B73v2_pos=6:114849130;1allele=C/G;version=Hapmap2;RS=rs130374354;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	125703768	125703866	.	+	.	Name=Height_above_ear;B73v2_pos=6:114849919;1allele=C/T;version=Hapmap2;RS=rs278071004;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	125713218	125713317	.	+	.	Name=Tassel_length;B73v2_pos=6:114862902;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	125752313	125752412	.	+	.	Name=Tassel_length;B73v2_pos=6:114902122;1allele=A/G;version=Hapmap2;RS=rs130374614;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	125763235	125763334	.	+	.	Name=Height_above_ear;B73v2_pos=6:114913047;1allele=A/G;version=Hapmap2;RS=rs130374555;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	125763405	125763504	.	+	.	Name=Height_above_ear;B73v2_pos=6:114913217;1allele=A/G;version=Hapmap2;RS=rs818866364;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	125763885	125763984	.	+	.	Name=Height_above_ear;B73v2_pos=6:114913697;1allele=C/T;version=Hapmap2;RS=rs278071045;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	125766660	125766759	.	+	.	Name=Tassel_length;B73v2_pos=6:114916472;1allele=C/G;version=Hapmap2;RS=rs278071064;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	125806675	125806774	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:208299028;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	125834302	125834401	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:114984058;1allele=A/G;version=Hapmap2;RS=rs130374648;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	125835860	125835959	.	+	.	Name=Leaf_width;B73v2_pos=6:114985590;1allele=A/C;version=Hapmap2;RS=rs130374656;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	125893620	125893719	.	+	.	Name=Leaf_width;B73v2_pos=6:115043225;1allele=A/G;version=Hapmap2;RS=rs727215236;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	125923781	125923880	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:115075060;1allele=G/A;version=Hapmap2;RS=rs833541678;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	125924808	125924907	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:115076088;1allele=C/G;version=Hapmap2;RS=rs278071436;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	125929601	125929700	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:115080881;1allele=A/T;version=Hapmap2;RS=rs810849210;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	125930194	125930293	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:115081474;1allele=C/A;version=Hapmap2;RS=rs727147796;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	125971203	125971302	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:115122483;1allele=A/T;version=Hapmap2;RS=rs846617158;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	126012617	126012716	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:33917510;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	126049726	126049825	.	+	.	Name=Ear_row_number;B73v2_pos=6:115187315;1allele=A/G;version=Hapmap2;RS=rs130375096;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	126054985	126055084	.	+	.	Name=Ear_row_number;B73v2_pos=6:115192484;1allele=G/T;version=Hapmap2;RS=rs130375126;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	126069284	126069383	.	+	.	Name=Ear_row_number;B73v2_pos=6:115206783;1allele=A/G;version=Hapmap2;RS=rs842977743;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	126071755	126071854	.	+	.	Name=Ear_row_number;B73v2_pos=6:115209254;1allele=A/C;version=Hapmap2;RS=rs827973110;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	126078281	126078380	.	+	.	Name=Ear_row_number;B73v2_pos=6:115215780;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	126087097	126087196	.	+	.	Name=Ear_row_number;B73v2_pos=6:115224596;1allele=G/A;version=Hapmap2;RS=rs130375311;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	126090732	126090831	.	+	.	Name=Ear_row_number;B73v2_pos=6:115228231;1allele=G/A;version=Hapmap2;RS=rs278071943;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	126121783	126121882	.	+	.	Name=Ear_row_number;B73v2_pos=6:115269708;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	126136037	126136136	.	+	.	Name=Ear_row_number;B73v2_pos=6:115285252;1allele=C/T;version=Hapmap2;RS=rs130375531;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	126290366	126290465	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:115438920;1allele=T/C;version=Hapmap2;RS=rs1063501359;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	126408786	126408885	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:115555975;1allele=A/G;version=Hapmap2;RS=rs850322125;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	126410153	126410252	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:115557342;1allele=G/T;version=Hapmap2;RS=rs803028743;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	126445471	126445570	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:115592643;1allele=G/A;version=Hapmap2;RS=rs835871314;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	126451839	126451938	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:115599011;1allele=A/G;version=Hapmap2;RS=rs278072962;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	126462274	126462373	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:115609453;1allele=C/A;version=Hapmap2;RS=rs803176373;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	126490784	126490883	.	+	.	Name=Tassel_length;B73v2_pos=6:115637969;1allele=T/A;version=Hapmap2;RS=rs1063061064;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	126731393	126731492	.	+	.	Name=Tassel_length;B73v2_pos=6:115829662;1allele=C/T;version=Hapmap2;RS=rs278073289;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	126731697	126731796	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:115829966;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	126754791	126754890	.	+	.	Name=Tassel_length;B73v2_pos=6:115904503;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	126883294	126883393	.	+	.	Name=Tassel_length;B73v2_pos=6:116025305;1allele=C/A;version=Hapmap2;RS=rs278073670;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	127212357	127212456	.	+	.	Name=Total_amino_acids;B73v2_pos=6:116342691;1allele=C/G;version=Hapmap2;RS=rs130376280;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	127321877	127321976	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:116457508;1allele=C/T;version=Hapmap2;RS=rs820253486;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	127416171	127416270	.	+	.	Name=Height_above_ear;B73v2_pos=6:116567759;1allele=A/G;version=Hapmap2;RS=rs132318277;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	127631718	127631817	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:116743177;1allele=A/C;version=Hapmap2;RS=rs278074772;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	127744340	127744439	.	+	.	Name=Leaf_width;B73v2_pos=6:116846521;1allele=G/C;version=Hapmap2;RS=rs808537287;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	127753931	127754030	.	+	.	Name=Leaf_width;B73v2_pos=6:116856113;1allele=T/G;version=Hapmap2;RS=rs832483699;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	127903397	127903496	.	+	.	Name=Leaf_width;B73v2_pos=6:117000149;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	127911489	127911588	.	+	.	Name=Leaf_width;B73v2_pos=6:117008245;1allele=G/A;version=Hapmap2;RS=rs803459985;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	127994340	127994439	.	+	.	Name=Leaf_width;B73v2_pos=6:117082344;1allele=T/A;version=Hapmap1;RS=rs132318542;2ref_allele=TA;3alt_allele=T
chr6	Wallace_2014	SNP	127994341	127994440	.	+	.	Name=Leaf_width;B73v2_pos=6:117082345;1allele=A/G;version=Hapmap1;RS=rs725903280;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	127995828	127995927	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:117083776;1allele=T/C;version=Hapmap2;RS=rs817928063;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	128003703	128003802	.	+	.	Name=Leaf_width;B73v2_pos=6:117130586;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128028245	128028344	.	+	.	Name=Leaf_width;B73v2_pos=6:117105858;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128137574	128137673	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:117315596;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128160323	128160422	.	+	.	Name=Tassel_length;B73v2_pos=6:117292834;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128209533	128209632	.	+	.	Name=Tassel_length;B73v2_pos=6:117243622;1allele=A/G;version=Hapmap2;RS=rs811584941;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	128209712	128209811	.	+	.	Name=Tassel_length;B73v2_pos=6:117243443;1allele=C/T;version=Hapmap2;RS=rs809386999;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	128225112	128225211	.	+	.	Name=Tassel_length;B73v2_pos=6:117233204;1allele=G/A;version=Hapmap2;RS=rs845446274;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	128286851	128286950	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:117371309;1allele=G/T;version=Hapmap2;RS=rs821792235;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	128354092	128354191	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:117437121;1allele=T/C;version=Hapmap2;RS=rs834923905;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	128366282	128366381	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:117449311;1allele=T/C;version=Hapmap2;RS=rs278076693;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	128446992	128447091	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:117530594;1allele=A/C;version=Hapmap2;RS=rs724560043;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	128515068	128515167	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:117599741;1allele=C/T;version=Hapmap2;RS=rs825953049;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	128519054	128519153	.	+	.	Name=Sucrose;B73v2_pos=6:117606437;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128520575	128520674	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:117604916;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128527455	128527554	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:117628128;1allele=G/T;version=Hapmap2;RS=rs1063554527;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	128560878	128560977	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:117653431;1allele=T/C;version=Hapmap2;RS=rs278076956;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	128572455	128572554	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:117722749;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128572859	128572958	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:117722345;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128574049	128574148	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:117721155;1allele=G/A;version=Hapmap2;RS=rs805313968;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	128575435	128575534	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:117719769;1allele=T/C;version=Hapmap2;RS=rs849694137;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	128576768	128576867	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:117718436;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128589523	128589622	.	+	.	Name=Leaf_width;B73v2_pos=6:117705679;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128604159	128604258	.	+	.	Name=Leaf_width;B73v2_pos=6:117691039;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128641375	128641474	.	+	.	Name=Height_above_ear;B73v2_pos=6:117755529;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128679420	128679519	.	+	.	Name=Height_above_ear;B73v2_pos=6:117793727;1allele=A/G;version=Hapmap2;RS=rs1064154224;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	128708460	128708559	.	+	.	Name=Height_above_ear;B73v2_pos=6:117822768;1allele=C/T;version=Hapmap2;RS=rs130378401;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	128780431	128780530	.	+	.	Name=Height_above_ear;B73v2_pos=6:117894729;1allele=C/T;version=Hapmap2;RS=rs813929237;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	128799798	128799897	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:117914101;1allele=C/T;version=Hapmap2;RS=rs802454931;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	128800398	128800497	.	+	.	Name=Height_above_ear;B73v2_pos=6:117914701;1allele=A/T;version=Hapmap2;RS=rs822630502;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	128859061	128859160	.	+	.	Name=Leaf_width;B73v2_pos=6:117974368;1allele=G/A;version=Hapmap2;RS=rs817119421;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	128885467	128885566	.	+	.	Name=Height_above_ear;B73v2_pos=6:118000782;1allele=T/G;version=Hapmap2;RS=rs278078396;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	128893589	128893688	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:118008043;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128896674	128896773	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:118011274;1allele=A/C;version=Hapmap2;RS=rs1062965060;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	128973262	128973361	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:118087867;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	128977269	128977368	.	+	.	Name=Fructose;B73v2_pos=6:118091874;1allele=A/G;version=Hapmap2;RS=rs841129005;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	129091111	129091210	.	+	.	Name=Leaf_width;B73v2_pos=6:118208777;1allele=A/C;version=Hapmap2;RS=rs278079205;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	129129830	129129929	.	+	.	Name=Leaf_width;B73v2_pos=6:118247374;1allele=A/C;version=Hapmap2;RS=rs836458771;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	129264376	129264475	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:118366069;1allele=G/A;version=Hapmap2;RS=rs826121861;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	129293727	129293826	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:118396541;1allele=G/A;version=Hapmap2;RS=rs813326657;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	129372099	129372198	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:118474011;1allele=T/G;version=Hapmap2;RS=rs842539152;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	129402224	129402323	.	+	.	Name=Malate;B73v2_pos=6:118503185;1allele=A/C;version=Hapmap2;RS=rs827947369;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	129420399	129420498	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:118521361;1allele=A/G;version=Hapmap2;RS=rs832562910;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	129448809	129448908	.	+	.	Name=Sucrose;B73v2_pos=6:118549780;1allele=A/C;version=Hapmap2;RS=rs826950850;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	129604629	129604728	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:118703438;1allele=C/T;version=Hapmap2;RS=rs804903980;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	129634780	129634879	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:118727442;1allele=G/T;version=Hapmap2;RS=rs278080571;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	129669529	129669628	.	+	.	Name=Leaf_width;B73v2_pos=6:118765764;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	129858184	129858283	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:119041586;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	129906001	129906100	.	+	.	Name=Leaf_width;B73v2_pos=6:119089822;1allele=G/A;version=Hapmap2;RS=rs1060625654;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	130138943	130139042	.	+	.	Name=Fructose;B73v2_pos=6:119264399;1allele=A/G;version=Hapmap2;RS=rs839010593;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	130400257	130400356	.	+	.	Name=Leaf_width;B73v2_pos=6:119565688;1allele=T/G;version=Hapmap2;RS=rs278081903;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	130419054	130419153	.	+	.	Name=Leaf_width;B73v2_pos=6:119603431;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	130419444	130419543	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:119603821;1allele=C/A;version=Hapmap2;RS=rs841707795;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	130448840	130448939	.	+	.	Name=Ear_height;B73v2_pos=6:119633928;1allele=C/T;version=Hapmap2;RS=rs829280326;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	130451206	130451305	.	+	.	Name=Leaf_width;B73v2_pos=6:119636294;1allele=A/C;version=Hapmap2;RS=rs278081987;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	130451977	130452076	.	+	.	Name=Leaf_width;B73v2_pos=6:119637065;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	130454062	130454161	.	+	.	Name=Leaf_width;B73v2_pos=6:119639150;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	130456567	130456666	.	+	.	Name=Leaf_width;B73v2_pos=6:119641655;1allele=C/T;version=Hapmap2;RS=rs130381493;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	130553259	130553358	.	+	.	Name=Ear_height;B73v2_pos=6:119730851;1allele=A/G;version=Hapmap2;RS=rs1064235664;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	130560060	130560159	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:119737652;1allele=G/A;version=Hapmap2;RS=rs278082348;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	130635374	130635473	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:119819555;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	130684758	130684857	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:119856150;1allele=T/C;version=Hapmap2;RS=rs278082471;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	130692923	130693022	.	+	.	Name=Ear_height;B73v2_pos=6:119864315;1allele=T/C;version=Hapmap1;RS=rs810011598;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	130752168	130752267	.	+	.	Name=Ear_height;B73v2_pos=6:119923481;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	130833350	130833449	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:120020844;1allele=A/C;version=Hapmap2;RS=rs130382105;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	130948446	130948545	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:120136027;1allele=C/A;version=Hapmap1;RS=rs132320602;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	131069571	131069670	.	+	.	Name=Leaf_width;B73v2_pos=6:120276655;1allele=A/G;version=Hapmap2;RS=rs809923623;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	131209240	131209339	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:120414376;1allele=G/C;version=Hapmap2;RS=rs804524895;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	131292574	131292673	.	+	.	Name=Leaf_width;B73v2_pos=6:120451280;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	131295968	131296067	.	+	.	Name=Leaf_width;B73v2_pos=6:120447886;1allele=G/A;version=Hapmap2;RS=rs278083852;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	131330754	131330853	.	+	.	Name=Leaf_width;B73v2_pos=6:120542688;1allele=G/A;version=Hapmap2;RS=rs278084173;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	131355023	131355122	.	+	.	Name=Leaf_width;B73v2_pos=6:120566957;1allele=G/A;version=Hapmap2;RS=rs819449704;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	131421721	131421820	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:120628554;1allele=C/T;version=Hapmap2;RS=rs808128736;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	131431163	131431262	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:120637996;1allele=A/G;version=Hapmap2;RS=rs825596842;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	131435053	131435152	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:120641886;1allele=G/T;version=Hapmap2;RS=rs846351434;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	131453952	131454051	.	+	.	Name=Leaf_width;B73v2_pos=6:120660788;1allele=A/G;version=Hapmap2;RS=rs278084768;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	131459077	131459176	.	+	.	Name=Leaf_width;B73v2_pos=6:120665913;1allele=A/T;version=Hapmap2;RS=rs726553489;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	131480365	131480464	.	+	.	Name=Leaf_width;B73v2_pos=6:120688277;1allele=C/T;version=Hapmap2;RS=rs278084882;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	131480403	131480502	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:120688315;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	131532480	131532579	.	+	.	Name=Leaf_width;B73v2_pos=6:120737800;1allele=C/A;version=Hapmap2;RS=rs278084940;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	131532919	131533018	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:120738239;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	131601275	131601374	.	+	.	Name=Sucrose;B73v2_pos=6:120809687;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	131688279	131688378	.	+	.	Name=Leaf_width;B73v2_pos=6:120915561;1allele=C/T;version=Hapmap2;RS=rs804555730;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	131696843	131696942	.	+	.	Name=Sucrose;B73v2_pos=6:120844960;1allele=C/T;version=Hapmap2;RS=rs132321056;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	131696854	131696953	.	+	.	Name=Sucrose;B73v2_pos=6:120844971;1allele=A/T;version=Hapmap2;RS=rs830506820;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	131701171	131701270	.	+	.	Name=Leaf_width;B73v2_pos=6:120849288;1allele=T/A;version=Hapmap2;RS=rs841594003;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	131709070	131709169	.	+	.	Name=Leaf_width;B73v2_pos=6:120857187;1allele=G/A;version=Hapmap2;RS=rs130383757;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	131783513	131783612	.	+	.	Name=Leaf_width;B73v2_pos=6:120990269;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	131820465	131820564	.	+	.	Name=Leaf_width;B73v2_pos=6:121027238;1allele=G/A;version=Hapmap2;RS=rs848840571;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	131826302	131826401	.	+	.	Name=Leaf_width;B73v2_pos=6:121033075;1allele=G/A;version=Hapmap2;RS=rs842102915;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	131835118	131835217	.	+	.	Name=Leaf_width;B73v2_pos=6:121041891;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	131994937	131995036	.	+	.	Name=Leaf_width;B73v2_pos=6:121215757;1allele=-/+;version=Hapmap2;RS=rs278086689;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	131996871	131996970	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:121217691;1allele=C/T;version=Hapmap2;RS=rs840751510;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	132134591	132134690	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:121356022;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	132254325	132254424	.	+	.	Name=Sucrose;B73v2_pos=6:121471873;1allele=C/T;version=Hapmap2;RS=rs840967623;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	132408643	132408742	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:121621789;1allele=A/G;version=Hapmap2;RS=rs1063831371;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	132428712	132428811	.	+	.	Name=Leaf_width;B73v2_pos=6:121641860;1allele=C/T;version=Hapmap2;RS=rs130384694;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	132443912	132444011	.	+	.	Name=Ear_height;B73v2_pos=6:121657566;1allele=C/T;version=Hapmap2;RS=rs725765235;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	132454851	132454950	.	+	.	Name=Tassel_length;B73v2_pos=6:121668510;1allele=C/T;version=Hapmap2;RS=rs823259003;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	132457943	132458042	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:121671602;1allele=C/T;version=Hapmap2;RS=rs726051206;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	132504569	132504668	.	+	.	Name=Leaf_width;B73v2_pos=6:121717760;1allele=G/T;version=Hapmap2;RS=rs130384933;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	132541255	132541354	.	+	.	Name=Leaf_width;B73v2_pos=6:121752690;1allele=T/A;version=Hapmap2;RS=rs130384983;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	132721595	132721694	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:121929488;1allele=A/G;version=Hapmap2;RS=rs828401482;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	132723252	132723351	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:121931145;1allele=A/T;version=Hapmap2;RS=rs278088157;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	132736209	132736308	.	+	.	Name=Sucrose;B73v2_pos=6:121944104;1allele=C/T;version=Hapmap1;RS=rs132321796;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	133000011	133000110	.	+	.	Name=Leaf_width;B73v2_pos=6:122247803;1allele=G/A;version=Hapmap1;RS=rs835972067;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	133266195	133266294	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:122498678;1allele=+/-;version=Hapmap2;RS=rs837346320;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	133281627	133281726	.	+	.	Name=Sucrose;B73v2_pos=6:122509631;1allele=C/T;version=Hapmap2;RS=rs814043221;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	133367138	133367237	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:122594814;1allele=C/T;version=Hapmap2;RS=rs834562833;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	133386334	133386433	.	+	.	Name=Leaf_length;B73v2_pos=6:122614019;1allele=A/T;version=Hapmap2;RS=rs841880360;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	133403599	133403698	.	+	.	Name=Leaf_width;B73v2_pos=6:122631287;1allele=G/A;version=Hapmap2;RS=rs825694932;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	133420937	133421036	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:122648630;1allele=G/A;version=Hapmap2;RS=rs835754227;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	133665703	133665802	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:122895486;1allele=A/T;version=Hapmap2;RS=rs815045761;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	134060815	134060914	.	+	.	Name=Ear_height;B73v2_pos=6:123323689;1allele=A/G;version=Hapmap2;RS=rs814250657;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	134439918	134440017	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:123686432;1allele=G/C;version=Hapmap2;RS=rs844214329;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	134606599	134606698	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:123851439;1allele=G/C;version=Hapmap2;RS=rs806750503;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	134680633	134680732	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:123919723;1allele=G/A;version=Hapmap2;RS=rs844812259;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	134683577	134683676	.	+	.	Name=Ear_row_number;B73v2_pos=6:123922667;1allele=T/G;version=Hapmap2;RS=rs850434021;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	134683645	134683744	.	+	.	Name=Ear_row_number;B73v2_pos=6:123922735;1allele=G/A;version=Hapmap2;RS=rs848637641;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	135061731	135061830	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:124301216;1allele=G/A;version=Hapmap1;RS=rs132323221;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	135236781	135236880	.	+	.	Name=Sucrose;B73v2_pos=6:124483500;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	135240145	135240244	.	+	.	Name=Sucrose;B73v2_pos=6:124486864;1allele=A/T;version=Hapmap2;RS=rs827252355;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	135297496	135297595	.	+	.	Name=Height_above_ear;B73v2_pos=6:124563161;1allele=G/C;version=Hapmap2;RS=rs850029547;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	135354320	135354419	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:124604189;1allele=C/G;version=Hapmap2;RS=rs838992050;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	136002676	136002775	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:125238247;1allele=T/C;version=Hapmap2;RS=rs810802047;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	136132633	136132732	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:125369285;1allele=T/A;version=Hapmap2;RS=rs278095600;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	136260337	136260436	.	+	.	Name=Height_above_ear;B73v2_pos=6:125496576;1allele=T/C;version=Hapmap2;RS=rs724742172;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	136386977	136387076	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:125635961;1allele=C/T;version=Hapmap2;RS=rs845682566;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	136543436	136543535	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:125792676;1allele=T/C;version=Hapmap2;RS=rs130391473;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	138107858	138107957	.	+	.	Name=Leaf_length;B73v2_pos=6:127310065;1allele=C/T;version=Hapmap2;RS=rs837753210;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	138178973	138179072	.	+	.	Name=Cob_diameter;B73v2_pos=6:127377168;1allele=C/T;version=Hapmap2;RS=rs826750772;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	138188374	138188473	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:127386512;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	138216284	138216383	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:127412465;1allele=A/T;version=Hapmap2;RS=rs837329020;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	138256543	138256642	.	+	.	Name=Sucrose;B73v2_pos=6:127451714;1allele=C/G;version=Hapmap2;RS=rs810698625;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	138470661	138470760	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:127662075;1allele=G/A;version=Hapmap2;RS=rs809334842;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	138526508	138526607	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:127718361;1allele=G/A;version=Hapmap2;RS=rs817664926;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	138581463	138581562	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:127772635;1allele=C/T;version=Hapmap2;RS=rs130393038;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	138710559	138710658	.	+	.	Name=Height_above_ear;B73v2_pos=6:127890445;1allele=A/C;version=Hapmap1;RS=rs132324996;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	138714294	138714393	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:127894180;1allele=C/T;version=Hapmap2;RS=rs278098165;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	138746302	138746401	.	+	.	Name=Leaf_length;B73v2_pos=6:127926193;1allele=G/C;version=Hapmap2;RS=rs844558118;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	138798051	138798150	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:127979206;1allele=C/T;version=Hapmap2;RS=rs835273858;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	138951014	138951113	.	+	.	Name=Leaf_length;B73v2_pos=6:128130618;1allele=A/C;version=Hapmap2;RS=rs278098804;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	138978062	138978161	.	+	.	Name=Sucrose;B73v2_pos=6:128157336;1allele=C/G;version=Hapmap2;RS=rs841330952;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	139100847	139100946	.	+	.	Name=Sucrose;B73v2_pos=6:128280162;1allele=A/G;version=Hapmap2;RS=rs725592478;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	139107327	139107426	.	+	.	Name=Sucrose;B73v2_pos=6:128286643;1allele=T/A;version=Hapmap2;RS=rs278099492;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	139119183	139119282	.	+	.	Name=Sucrose;B73v2_pos=6:128298419;1allele=G/A;version=Hapmap2;RS=rs829707692;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	139140628	139140727	.	+	.	Name=Plant_height;B73v2_pos=6:128319865;1allele=G/A;version=Hapmap2;RS=rs812540283;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	139165191	139165290	.	+	.	Name=Sucrose;B73v2_pos=6:128371877;1allele=C/T;version=Hapmap2;RS=rs278099781;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	139322163	139322262	.	+	.	Name=Ear_row_number;B73v2_pos=6:128501059;1allele=A/G;version=Hapmap2;RS=rs811540858;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	139335790	139335889	.	+	.	Name=Sucrose;B73v2_pos=6:128513653;1allele=G/T;version=Hapmap2;RS=rs847378912;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	139336860	139336959	.	+	.	Name=Fructose;B73v2_pos=6:128514723;1allele=G/A;version=Hapmap2;RS=rs805539878;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	139344750	139344849	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:128522618;1allele=G/A;version=Hapmap2;RS=rs725915742;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	139352175	139352274	.	+	.	Name=Leaf_length;B73v2_pos=6:128530043;1allele=A/G;version=Hapmap2;RS=rs845172276;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	139394133	139394232	.	+	.	Name=Sucrose;B73v2_pos=6:128572870;1allele=C/T;version=Hapmap2;RS=rs278100430;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	139402767	139402866	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:128581504;1allele=C/G;version=Hapmap2;RS=rs813225866;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	139403676	139403775	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:128582413;1allele=A/G;version=Hapmap2;RS=rs839225786;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	139867430	139867529	.	+	.	Name=Ear_row_number;B73v2_pos=6:129042853;1allele=T/C;version=Hapmap1;RS=rs132326083;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	139942433	139942532	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:129069479;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	139943444	139943543	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:129070489;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	140021864	140021963	.	+	.	Name=Sucrose;B73v2_pos=6:129149121;1allele=T/G;version=Hapmap2;RS=rs848099598;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	140267124	140267223	.	+	.	Name=Cob_diameter;B73v2_pos=6:129387067;1allele=A/T;version=Hapmap2;RS=rs823773059;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	140275831	140275930	.	+	.	Name=Cob_diameter;B73v2_pos=6:129395775;1allele=T/C;version=Hapmap2;RS=rs1062225596;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	140345158	140345257	.	+	.	Name=Cob_diameter;B73v2_pos=6:129465979;1allele=G/A;version=Hapmap2;RS=rs132326398;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	140499437	140499536	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:129626187;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	140531449	140531548	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:129659847;1allele=T/C;version=Hapmap2;RS=rs278102316;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	140531492	140531591	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:129659890;1allele=C/T;version=Hapmap2;RS=rs278102318;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140535649	140535748	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:129664047;1allele=G/A;version=Hapmap2;RS=rs132326753;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	140690509	140690608	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:129813608;1allele=T/C;version=Hapmap2;RS=rs813766774;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	140692412	140692511	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:129815511;1allele=T/A;version=Hapmap2;RS=rs827863413;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	140723836	140723935	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:129838514;1allele=A/G;version=Hapmap2;RS=rs809913992;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	140810671	140810770	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:129907779;1allele=/AACCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	140819941	140820040	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:129917049;1allele=A/G;version=Hapmap2;RS=rs826012799;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	140861701	140861800	.	+	.	Name=Plant_height;B73v2_pos=6:129958761;1allele=C/T;version=Hapmap2;RS=rs820887760;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140862804	140862903	.	+	.	Name=Plant_height;B73v2_pos=6:129959864;1allele=G/A;version=Hapmap2;RS=rs802476471;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	140864963	140865062	.	+	.	Name=Plant_height;B73v2_pos=6:129962023;1allele=C/T;version=Hapmap2;RS=rs1063432963;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140869205	140869304	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:129966265;1allele=C/G;version=Hapmap2;RS=rs132327154;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	140871721	140871820	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:129968781;1allele=C/T;version=Hapmap2;RS=rs831708556;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140888182	140888281	.	+	.	Name=Ear_row_number;B73v2_pos=6:129985154;1allele=C/T;version=Hapmap2;RS=rs838529077;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140909089	140909188	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:130006068;1allele=C/A;version=Hapmap1;RS=rs130397005;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140911851	140911950	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:130008830;1allele=C/T;version=Hapmap2;RS=rs834198771;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140987022	140987121	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:130084525;1allele=C/T;version=Hapmap2;RS=rs725510796;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	140988709	140988808	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:130086212;1allele=C/A;version=Hapmap2;RS=rs849213161;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	141031119	141031218	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:130129697;1allele=T/C;version=Hapmap2;RS=rs802433009;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	141034112	141034211	.	+	.	Name=Sucrose;B73v2_pos=6:130132690;1allele=T/C;version=Hapmap1;RS=rs130397178;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	141149106	141149205	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:130250124;1allele=G/A;version=Hapmap2;RS=rs824906511;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	141305349	141305448	.	+	.	Name=Leaf_length;B73v2_pos=6:130409708;1allele=A/T;version=Hapmap2;RS=rs831122718;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	141307089	141307188	.	+	.	Name=Leaf_length;B73v2_pos=6:130411448;1allele=A/T;version=Hapmap2;RS=rs826174756;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	141489130	141489229	.	+	.	Name=Leaf_width;B73v2_pos=6:130591878;1allele=G/A;version=Hapmap2;RS=rs278104466;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	141495567	141495666	.	+	.	Name=Glutamate;B73v2_pos=6:130598315;1allele=A/C;version=Hapmap2;RS=rs278104516;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	141584836	141584935	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:130679883;1allele=A/G;version=Hapmap2;RS=rs822810928;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	141826171	141826270	.	+	.	Name=Leaf_width;B73v2_pos=6:130926854;1allele=T/G;version=Hapmap2;RS=rs805442191;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	141843961	141844060	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:130944686;1allele=T/G;version=Hapmap1;RS=rs132328083;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	142033600	142033699	.	+	.	Name=Leaf_width;B73v2_pos=6:131138727;1allele=A/G;version=Hapmap2;RS=rs1061011690;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	142038203	142038302	.	+	.	Name=Leaf_length;B73v2_pos=6:131143330;1allele=C/G;version=Hapmap2;RS=rs835171533;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	142061567	142061666	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:131166700;1allele=G/A;version=Hapmap2;RS=rs839698648;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	142103459	142103558	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:131209033;1allele=G/T;version=Hapmap2;RS=rs278105676;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	142113418	142113517	.	+	.	Name=Leaf_width;B73v2_pos=6:131218993;1allele=C/T;version=Hapmap2;RS=rs278105692;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142116633	142116732	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:131222207;1allele=T/G;version=Hapmap2;RS=rs833938648;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	142187634	142187733	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:131272530;1allele=T/C;version=Hapmap2;RS=rs838039850;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142228578	142228677	.	+	.	Name=Leaf_width;B73v2_pos=6:131330932;1allele=C/T;version=Hapmap2;RS=rs1062733051;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142276319	142276418	.	+	.	Name=Fructose;B73v2_pos=6:131469726;1allele=G/C;version=Hapmap2;RS=rs836159912;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	142287214	142287313	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:131409832;1allele=A/G;version=Hapmap2;RS=rs814524390;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	142287380	142287479	.	+	.	Name=Leaf_width;B73v2_pos=6:131409998;1allele=G/A;version=Hapmap2;RS=rs834560634;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	142287397	142287496	.	+	.	Name=Leaf_width;B73v2_pos=6:131410015;1allele=G/A;version=Hapmap2;RS=rs823886944;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	142301854	142301953	.	+	.	Name=Leaf_width;B73v2_pos=6:131376135;1allele=T/A;version=Hapmap2;RS=rs844454898;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	142368503	142368602	.	+	.	Name=Sucrose;B73v2_pos=6:131451361;1allele=C/G;version=Hapmap2;RS=rs132328514;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	142369877	142369976	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:131452735;1allele=G/A;version=Hapmap2;RS=rs278105919;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	142406836	142406935	.	+	.	Name=Leaf_width;B73v2_pos=6:131514648;1allele=C/T;version=Hapmap2;RS=rs278105978;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142585629	142585728	.	+	.	Name=Leaf_width;B73v2_pos=6:131766426;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	142620449	142620548	.	+	.	Name=Ear_row_number;B73v2_pos=6:131707807;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	142693253	142693352	.	+	.	Name=Ear_row_number;B73v2_pos=6:131831641;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	142781039	142781138	.	+	.	Name=Leaf_width;B73v2_pos=6:131915265;1allele=C/T;version=Hapmap2;RS=rs278106184;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142781692	142781791	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:131915918;1allele=T/C;version=Hapmap1;RS=rs132328702;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142888455	142888554	.	+	.	Name=Leaf_width;B73v2_pos=6:131957882;1allele=C/T;version=Hapmap2;RS=rs278106271;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142913000	142913099	.	+	.	Name=Ear_row_number;B73v2_pos=6:131982512;1allele=G/A;version=Hapmap2;RS=rs814589092;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	142913266	142913365	.	+	.	Name=Ear_row_number;B73v2_pos=6:131982778;1allele=C/A;version=Hapmap2;RS=rs818576672;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	142950291	142950390	.	+	.	Name=Ear_row_number;B73v2_pos=6:132019713;1allele=T/C;version=Hapmap2;RS=rs845149545;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	142951557	142951656	.	+	.	Name=Leaf_width;B73v2_pos=6:132020979;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	142992744	142992843	.	+	.	Name=Leaf_length;B73v2_pos=6:132060052;1allele=C/T;version=Hapmap2;RS=rs831315300;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	142998688	142998787	.	+	.	Name=Ear_row_number;B73v2_pos=6:132065996;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	142999546	142999645	.	+	.	Name=Ear_row_number;B73v2_pos=6:132066854;1allele=C/G;version=Hapmap2;RS=rs802760547;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	143003976	143004075	.	+	.	Name=Leaf_width;B73v2_pos=6:132071284;1allele=G/C;version=Hapmap2;RS=rs810149286;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	143119226	143119325	.	+	.	Name=Leaf_width;B73v2_pos=6:132185943;1allele=C/T;version=Hapmap2;RS=rs278106875;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	143242587	143242686	.	+	.	Name=Ear_row_number;B73v2_pos=6:132304814;1allele=G/C;version=Hapmap2;RS=rs278107229;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	143331745	143331844	.	+	.	Name=Cob_diameter;B73v2_pos=6:132392418;1allele=C/A;version=Hapmap2;RS=rs820109563;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	143355294	143355393	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:132416023;1allele=A/G;version=Hapmap2;RS=rs130399754;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	143357468	143357567	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:132417822;1allele=C/T;version=Hapmap2;RS=rs132329313;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	143544135	143544234	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:132607581;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	143544828	143544927	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:132608274;1allele=T/A;version=Hapmap2;RS=rs819482387;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	143589806	143589905	.	+	.	Name=Ear_height;B73v2_pos=6:132651655;1allele=T/C;version=Hapmap2;RS=rs802960495;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	143631094	143631193	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:132692918;1allele=C/G;version=Hapmap2;RS=rs132329650;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	143725236	143725335	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:132825936;1allele=T/C;version=Hapmap1;RS=rs132329822;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	143727457	143727556	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:132828157;1allele=T/A;version=Hapmap2;RS=rs278108300;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	143782613	143782712	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:132883697;1allele=AAT/;version=Hapmap1;RS=rs830301266;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	143783059	143783158	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:132884143;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	143783104	143783203	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:132884188;1allele=C/T;version=Hapmap2;RS=rs130400556;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	143783586	143783685	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:132884670;1allele=A/G;version=Hapmap2;RS=rs832334634;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	143783596	143783695	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:132884680;1allele=T/G;version=Hapmap2;RS=rs132329858;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	143845832	143845931	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:132931660;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	143860778	143860877	.	+	.	Name=Tassel_length;B73v2_pos=6:132946606;1allele=A/G;version=Hapmap2;RS=rs130400609;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	143861450	143861549	.	+	.	Name=Tassel_length;B73v2_pos=6:132947278;1allele=C/T;version=Hapmap2;RS=rs130400615;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	143865801	143865900	.	+	.	Name=Tassel_length;B73v2_pos=6:132951573;1allele=G/T;version=Hapmap2;RS=rs813515491;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	143868633	143868732	.	+	.	Name=Tassel_length;B73v2_pos=6:132954405;1allele=A/G;version=Hapmap2;RS=rs130400689;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	143874168	143874267	.	+	.	Name=Tassel_length;B73v2_pos=6:132959942;1allele=G/A;version=Hapmap2;RS=rs278108759;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	143882790	143882889	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:132968568;1allele=C/T;version=Hapmap2;RS=rs278108778;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144023418	144023517	.	+	.	Name=Leaf_length;B73v2_pos=6:133036292;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144103004	144103103	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:133202766;1allele=/TC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144116659	144116758	.	+	.	Name=Ear_height;B73v2_pos=6:133215800;1allele=G/A;version=Hapmap2;RS=rs278109169;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	144119802	144119901	.	+	.	Name=Ear_height;B73v2_pos=6:133218946;1allele=C/T;version=Hapmap2;RS=rs831225754;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144144710	144144809	.	+	.	Name=Ear_height;B73v2_pos=6:133243868;1allele=C/T;version=Hapmap2;RS=rs1062740818;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144146133	144146232	.	+	.	Name=Ear_height;B73v2_pos=6:133245292;1allele=T/C;version=Hapmap2;RS=rs278109360;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	144262460	144262559	.	+	.	Name=Tassel_length;B73v2_pos=6:133352751;1allele=G/A;version=Hapmap2;RS=rs842752403;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	144266835	144266934	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:133357126;1allele=G/A;version=Hapmap2;RS=rs130401295;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	144369099	144369198	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:133474581;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144410811	144410910	.	+	.	Name=Ear_height;B73v2_pos=6:133517941;1allele=C/T;version=Hapmap2;RS=rs839642797;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144412428	144412527	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:133519558;1allele=C/T;version=Hapmap2;RS=rs828116867;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144529821	144529920	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:133638869;1allele=C/T;version=Hapmap2;RS=rs132330381;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144529821	144529920	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:133638869;1allele=C/T;version=Hapmap2;RS=rs132330381;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144530681	144530780	.	+	.	Name=Ear_height;B73v2_pos=6:133639729;1allele=C/A;version=Hapmap2;RS=rs837963384;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	144536173	144536272	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:133645221;1allele=T/C;version=Hapmap2;RS=rs726307491;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	144564690	144564789	.	+	.	Name=Leaf_width;B73v2_pos=6:133673747;1allele=T/C;version=Hapmap2;RS=rs130401660;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	144611607	144611706	.	+	.	Name=Leaf_width;B73v2_pos=6:133721396;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144634153	144634252	.	+	.	Name=Leaf_width;B73v2_pos=6:133744063;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144671005	144671104	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:133772631;1allele=A/G;version=Hapmap2;RS=rs813272343;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	144679162	144679261	.	+	.	Name=Leaf_width;B73v2_pos=6:133785768;1allele=T/A;version=Hapmap2;RS=rs1063210601;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	144679169	144679268	.	+	.	Name=Leaf_width;B73v2_pos=6:133785775;1allele=C/A;version=Hapmap2;RS=rs1063778237;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	144681983	144682082	.	+	.	Name=Leaf_width;B73v2_pos=6:133788589;1allele=T/C;version=Hapmap2;RS=rs1060759270;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	144682558	144682659	.	+	.	Name=Leaf_width;B73v2_pos=6:133789164;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144687679	144687778	.	+	.	Name=Leaf_width;B73v2_pos=6:133794287;1allele=G/A;version=Hapmap2;RS=rs1061313640;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	144688328	144688427	.	+	.	Name=Leaf_width;B73v2_pos=6:133794936;1allele=T/C;version=Hapmap2;RS=rs848310354;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	144688328	144688427	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:133794936;1allele=T/C;version=Hapmap2;RS=rs848310354;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	144693508	144693607	.	+	.	Name=Leaf_width;B73v2_pos=6:133800117;1allele=G/A;version=Hapmap2;RS=rs130401880;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	144693508	144693607	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:133800117;1allele=G/A;version=Hapmap2;RS=rs130401880;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	144697777	144697876	.	+	.	Name=Leaf_width;B73v2_pos=6:133804392;1allele=A/G;version=Hapmap2;RS=rs278110246;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	144756686	144756785	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:133896211;1allele=T/C;version=Hapmap2;RS=rs130402110;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	144756686	144756785	.	+	.	Name=Leaf_width;B73v2_pos=6:133896211;1allele=T/C;version=Hapmap2;RS=rs130402110;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	144798757	144798856	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:133876963;1allele=C/T;version=Hapmap2;RS=rs814298091;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	144842653	144842752	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:133935712;1allele=A/T;version=Hapmap2;RS=rs814078221;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	144858601	144858700	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:133951662;1allele=A/G;version=Hapmap2;RS=rs821839146;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	144920299	144920398	.	+	.	Name=Tassel_length;B73v2_pos=6:134102121;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144921088	144921187	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134101332;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144922222	144922317	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134100198;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144931416	144931515	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134091056;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	144931755	144931854	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134090717;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	145000967	145001066	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134055746;1allele=A/C;version=Hapmap2;RS=rs278110524;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	145009649	145009748	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134064432;1allele=C/T;version=Hapmap2;RS=rs832573841;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	145091440	145091539	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134166952;1allele=A/C;version=Hapmap2;RS=rs807785602;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	145463946	145464045	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134514475;1allele=A/G;version=Hapmap2;RS=rs278111369;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	145522306	145522405	.	+	.	Name=Leaf_width;B73v2_pos=6:134566219;1allele=G/A;version=Hapmap2;RS=rs278111560;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	145605609	145605708	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:134647357;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	145606418	145606517	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:134648166;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	145614236	145614335	.	+	.	Name=Ear_height;B73v2_pos=6:134655834;1allele=C/G;version=Hapmap2;RS=rs278111828;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	145660053	145660152	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:134700795;1allele=T/C;version=Hapmap2;RS=rs834978026;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	145660053	145660152	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:134700795;1allele=T/C;version=Hapmap2;RS=rs834978026;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	145698426	145698524	.	+	.	Name=Leaf_width;B73v2_pos=6:134733727;1allele=A/G;version=Hapmap2;RS=rs837388729;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	145877623	145877722	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134923944;1allele=A/G;version=Hapmap2;RS=rs131177160;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	145933629	145933728	.	+	.	Name=Cob_diameter;B73v2_pos=6:134979602;1allele=G/A;version=Hapmap2;RS=rs823575297;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	145948014	145948113	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:134993987;1allele=T/A;version=Hapmap2;RS=rs278112407;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	146099638	146099737	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:135146454;1allele=T/A;version=Hapmap2;RS=rs806078251;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	146224405	146224504	.	+	.	Name=Leaf_width;B73v2_pos=6:135321691;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	146224422	146224521	.	+	.	Name=Leaf_width;B73v2_pos=6:135321674;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	146311890	146311989	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:135351570;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	146501566	146501665	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:135530321;1allele=G/A;version=Hapmap2;RS=rs846795431;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	146509126	146509225	.	+	.	Name=Leaf_width;B73v2_pos=6:135537881;1allele=A/G;version=Hapmap2;RS=rs132331565;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	146645773	146645872	.	+	.	Name=Cob_diameter;B73v2_pos=6:135673490;1allele=C/T;version=Hapmap2;RS=rs278114046;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	146937467	146937566	.	+	.	Name=Ear_height;B73v2_pos=6:135964817;1allele=A/T;version=Hapmap2;RS=rs847817268;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	146948273	146948372	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:135975624;1allele=C/T;version=Hapmap2;RS=rs848914382;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	146948273	146948372	.	+	.	Name=Days_to_silk;B73v2_pos=6:135975624;1allele=C/T;version=Hapmap2;RS=rs848914382;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	146965265	146965364	.	+	.	Name=Ear_height;B73v2_pos=6:135992624;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	146967754	146967853	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:135995113;1allele=T/G;version=Hapmap2;RS=rs869670966;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	146970742	146970841	.	+	.	Name=Fructose;B73v2_pos=6:135998101;1allele=C/T;version=Hapmap2;RS=rs830870453;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	146986280	146986379	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:136013639;1allele=C/T;version=Hapmap1;RS=rs132331858;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	147023368	147023467	.	+	.	Name=Plant_height;B73v2_pos=6:136050732;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	147211039	147211138	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:136256903;1allele=T/A;version=Hapmap2;RS=rs278115226;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	147240238	147240337	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:136285849;1allele=A/G;version=Hapmap2;RS=rs278115374;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	147240350	147240449	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:136285961;1allele=T/C;version=Hapmap2;RS=rs130403675;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	147240350	147240449	.	+	.	Name=Ear_height;B73v2_pos=6:136285961;1allele=T/C;version=Hapmap2;RS=rs130403675;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	147370113	147370212	.	+	.	Name=Tassel_length;B73v2_pos=6:136413392;1allele=C/T;version=Hapmap2;RS=rs278115590;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	147370180	147370279	.	+	.	Name=Tassel_length;B73v2_pos=6:136413459;1allele=A/C;version=Hapmap2;RS=rs278115591;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	147371231	147371330	.	+	.	Name=Tassel_length;B73v2_pos=6:136414510;1allele=G/A;version=Hapmap2;RS=rs278115606;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	147373353	147373452	.	+	.	Name=Tassel_length;B73v2_pos=6:136416632;1allele=G/A;version=Hapmap2;RS=rs278115649;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	147386790	147386889	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:136430069;1allele=A/G;version=Hapmap2;RS=rs812089315;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	147386825	147386924	.	+	.	Name=Ear_height;B73v2_pos=6:136430104;1allele=T/C;version=Hapmap2;RS=rs278115752;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	147463487	147463586	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:136506483;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	147494709	147494808	.	+	.	Name=Tassel_length;B73v2_pos=6:136538777;1allele=G/T;version=Hapmap2;RS=rs278115886;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	147563360	147563459	.	+	.	Name=Tassel_length;B73v2_pos=6:136620863;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	147879187	147879286	.	+	.	Name=Tassel_length;B73v2_pos=6:136915201;1allele=T/C;version=Hapmap2;RS=rs278116732;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	147911605	147911704	.	+	.	Name=Cob_diameter;B73v2_pos=6:136943638;1allele=G/A;version=Hapmap2;RS=rs830927717;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	148471355	148471454	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:137406200;1allele=A/G;version=Hapmap2;RS=rs822857329;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	148545859	148545958	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:137487644;1allele=C/T;version=Hapmap2;RS=rs278117601;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	148669380	148669479	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:137634809;1allele=C/T;version=Hapmap2;RS=rs1063894605;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	148703922	148704021	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:137669355;1allele=T/G;version=Hapmap2;RS=rs1061661814;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	148926300	148926399	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:137881807;1allele=T/C;version=Hapmap2;RS=rs829887728;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	148947940	148948039	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:137895012;1allele=G/A;version=Hapmap2;RS=rs724492293;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	149034642	149034741	.	+	.	Name=Cob_diameter;B73v2_pos=6:137982014;1allele=T/C;version=Hapmap2;RS=rs832068397;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	149180391	149180490	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138126147;1allele=G/A;version=Hapmap2;RS=rs821547363;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	149340898	149340997	.	+	.	Name=Plant_height;B73v2_pos=6:138287030;1allele=+/-;version=Hapmap2;RS=rs130405642;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	149354975	149355074	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:138302851;1allele=G/T;version=Hapmap2;RS=rs806728346;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	149357274	149357373	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:138305150;1allele=C/A;version=Hapmap2;RS=rs814019653;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	149357274	149357373	.	+	.	Name=Plant_height;B73v2_pos=6:138305150;1allele=C/A;version=Hapmap2;RS=rs814019653;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	149405762	149405861	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:138354096;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	149441426	149441525	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:198057063;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	149476366	149476465	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:138422392;1allele=G/A;version=Hapmap2;RS=rs278119446;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	149521440	149521539	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:138466025;1allele=C/G;version=Hapmap2;RS=rs817447160;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	149557122	149557221	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138501711;1allele=C/G;version=Hapmap2;RS=rs130406000;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	149557345	149557444	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138501934;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	149567370	149567469	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138511960;1allele=T/C;version=Hapmap2;RS=rs1061887606;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	149622404	149622503	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138562302;1allele=T/C;version=Hapmap2;RS=rs130406069;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	149637694	149637793	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:138577439;1allele=/TCTC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	149714799	149714898	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138654360;1allele=G/A;version=Hapmap2;RS=rs278119911;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	149718136	149718235	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138657838;1allele=T/A;version=Hapmap2;RS=rs278119947;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	149718800	149718899	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:138658502;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	149721238	149721337	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:138660940;1allele=C/A;version=Hapmap2;RS=rs812527766;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	149806739	149806838	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:138721357;1allele=G/A;version=Hapmap2;RS=rs807205171;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	149840105	149840204	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:138754939;1allele=A/C;version=Hapmap2;RS=rs815577051;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	149852304	149852403	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:138767138;1allele=A/G;version=Hapmap2;RS=rs827193406;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	149852802	149852901	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:138767640;1allele=C/G;version=Hapmap2;RS=rs130406559;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	149853011	149853110	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:138767849;1allele=G/T;version=Hapmap2;RS=rs835011221;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	149911495	149911594	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:138827107;1allele=A/G;version=Hapmap2;RS=rs130406708;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	149933000	149933099	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:138848365;1allele=G/A;version=Hapmap2;RS=rs804042232;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	149938993	149939092	.	+	.	Name=Plant_height;B73v2_pos=6:138854036;1allele=C/T;version=Hapmap2;RS=rs808043799;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	149957051	149957150	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:138872099;1allele=G/A;version=Hapmap2;RS=rs818166768;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	149957051	149957150	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:138872099;1allele=G/A;version=Hapmap2;RS=rs818166768;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	149957631	149957730	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:138872679;1allele=G/A;version=Hapmap2;RS=rs832969748;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	149958225	149958324	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:138873273;1allele=G/T;version=Hapmap2;RS=rs132333760;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	149958555	149958654	.	+	.	Name=Leaf_width;B73v2_pos=6:138873603;1allele=A/G;version=Hapmap1;RS=rs132333764;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	149961591	149961688	.	+	.	Name=Leaf_width;B73v2_pos=6:138876639;1allele=G/T;version=Hapmap2;RS=rs829055691;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	150287325	150287424	.	+	.	Name=Tassel_length;B73v2_pos=6:139198016;1allele=A/C;version=Hapmap2;RS=rs834721526;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	150466092	150466191	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:139371277;1allele=G/A;version=Hapmap2;RS=rs829264152;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	150577829	150577928	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:139480946;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150581015	150581114	.	+	.	Name=Leaf_width;B73v2_pos=6:139484132;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150583558	150583657	.	+	.	Name=Plant_height;B73v2_pos=6:139486676;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150583558	150583657	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:139486676;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150665462	150665561	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:139565384;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150686617	150686716	.	+	.	Name=Ear_height;B73v2_pos=6:139586775;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150736878	150736977	.	+	.	Name=Plant_height;B73v2_pos=6:139676398;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150736896	150736995	.	+	.	Name=Plant_height;B73v2_pos=6:139676416;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150736932	150737031	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:139676452;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150736932	150737031	.	+	.	Name=Plant_height;B73v2_pos=6:139676452;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150745130	150745229	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:139684650;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	150745130	150745229	.	+	.	Name=Plant_height;B73v2_pos=6:139684650;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	151406971	151407070	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:140262267;1allele=G/A;version=Hapmap2;RS=rs814708414;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	151522953	151523052	.	+	.	Name=Southern_leaf_blight;B73v2_pos=5:23422582;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	151636862	151636961	.	+	.	Name=Tassel_length;B73v2_pos=6:140467793;1allele=T/C;version=Hapmap2;RS=rs846879934;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	151638179	151638278	.	+	.	Name=Tassel_length;B73v2_pos=6:140469110;1allele=C/G;version=Hapmap2;RS=rs278123567;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	151639748	151639847	.	+	.	Name=Tassel_length;B73v2_pos=6:140470680;1allele=C/T;version=Hapmap2;RS=rs726267419;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	151701998	151702097	.	+	.	Name=Tassel_length;B73v2_pos=6:140544061;1allele=CT/;version=Hapmap1;RS=rs811956944;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	151799285	151799384	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:140657349;1allele=C/T;version=Hapmap2;RS=rs832586392;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	151819435	151819534	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:140677497;1allele=T/C;version=Hapmap2;RS=rs278124005;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	151819471	151819570	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:140677533;1allele=C/T;version=Hapmap2;RS=rs807126692;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	151837557	151837656	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:140695618;1allele=G/A;version=Hapmap2;RS=rs812012885;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	151839832	151839931	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:140697893;1allele=T/A;version=Hapmap2;RS=rs826332195;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	151848686	151848785	.	+	.	Name=Cob_diameter;B73v2_pos=6:140706750;1allele=G/A;version=Hapmap2;RS=rs130409541;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	151857116	151857215	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:140715186;1allele=G/T;version=Hapmap2;RS=rs1064217287;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	151865530	151865629	.	+	.	Name=Leaf_width;B73v2_pos=6:140723602;1allele=+/-;version=Hapmap2;RS=rs803071969;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	151867235	151867334	.	+	.	Name=Leaf_width;B73v2_pos=6:140725307;1allele=G/T;version=Hapmap2;RS=rs822122206;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	151922383	151922482	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:140780591;1allele=A/G;version=Hapmap2;RS=rs843446742;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	151995767	151995866	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:140847472;1allele=A/G;version=Hapmap2;RS=rs804175467;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	152067746	152067845	.	+	.	Name=Cob_diameter;B73v2_pos=6:140923958;1allele=G/A;version=Hapmap2;RS=rs815724324;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	152231154	152231253	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:141066879;1allele=C/T;version=Hapmap2;RS=rs1061574960;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	152241855	152241954	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:141077580;1allele=A/G;version=Hapmap2;RS=rs804206974;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	152248672	152248771	.	+	.	Name=Tassel_length;B73v2_pos=6:141084398;1allele=C/T;version=Hapmap2;RS=rs824087792;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	152303659	152303758	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:141139413;1allele=G/T;version=Hapmap1;RS=rs132335627;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	152422237	152422336	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:141258244;1allele=C/G;version=Hapmap2;RS=rs846979812;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	152428310	152428409	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:141264318;1allele=G/T;version=Hapmap2;RS=rs846300500;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	152432168	152432267	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:141268176;1allele=G/A;version=Hapmap2;RS=rs846211525;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	152469601	152469700	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:141305619;1allele=C/T;version=Hapmap2;RS=rs132335876;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	152488033	152488132	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:141324052;1allele=T/G;version=Hapmap2;RS=rs848079931;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	152489540	152489639	.	+	.	Name=Height_above_ear;B73v2_pos=6:141325559;1allele=A/G;version=Hapmap2;RS=rs278125370;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	152493042	152493141	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:141329059;1allele=C/G;version=Hapmap2;RS=rs822119099;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	152557628	152557727	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:141390493;1allele=G/T;version=Hapmap2;RS=rs820187940;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	152588940	152589039	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:141421809;1allele=G/A;version=Hapmap2;RS=rs130410765;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	152640398	152640497	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:141473202;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	152641842	152641941	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:141474646;1allele=G/A;version=Hapmap2;RS=rs846139273;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	152668964	152669063	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:141501770;1allele=-/+;version=Hapmap2;RS=rs841257041;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	152669161	152669260	.	+	.	Name=Plant_height;B73v2_pos=6:141501967;1allele=T/A;version=Hapmap2;RS=rs815289904;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	152670650	152670749	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:141503456;1allele=G/T;version=Hapmap2;RS=rs817065606;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	152800030	152800129	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:141632699;1allele=A/C;version=Hapmap2;RS=rs812035512;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	152881527	152881626	.	+	.	Name=Nitrate;B73v2_pos=5:167085251;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	152960937	152961036	.	+	.	Name=Plant_height;B73v2_pos=6:141794236;1allele=T/C;version=Hapmap2;RS=rs278126379;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	153075509	153075608	.	+	.	Name=Height_above_ear;B73v2_pos=6:141906704;1allele=G/A;version=Hapmap2;RS=rs278126672;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	153077425	153077524	.	+	.	Name=Plant_height;B73v2_pos=6:141908620;1allele=G/C;version=Hapmap2;RS=rs278126689;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	153077425	153077524	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:141908620;1allele=G/C;version=Hapmap2;RS=rs278126689;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	153109770	153109869	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:141940966;1allele=G/A;version=Hapmap2;RS=rs811801582;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	153143539	153143638	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:142090087;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	153143852	153143951	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:142089774;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	153145454	153145553	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:142088172;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	153454528	153454627	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:142313386;1allele=T/A;version=Hapmap1;RS=rs132336604;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	153456186	153456285	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:142315044;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	153793678	153793777	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:142659195;1allele=T/G;version=Hapmap2;RS=rs278127691;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	153825612	153825711	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:142691134;1allele=A/C;version=Hapmap2;RS=rs805805524;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	153984495	153984594	.	+	.	Name=Tassel_length;B73v2_pos=6:142867922;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	153984523	153984622	.	+	.	Name=Tassel_length;B73v2_pos=6:142867894;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	154038197	154038296	.	+	.	Name=Leaf_width;B73v2_pos=6:142896334;1allele=/GAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	154166070	154166169	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:143025873;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	154230128	154230227	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:143080512;1allele=C/A;version=Hapmap2;RS=rs848619985;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	154697932	154698031	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:143570317;1allele=T/C;version=Hapmap2;RS=rs130412902;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	154890021	154890120	.	+	.	Name=Tassel_length;B73v2_pos=6:143754981;1allele=T/C;version=Hapmap2;RS=rs821178451;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	154929637	154929736	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:143796285;1allele=C/T;version=Hapmap2;RS=rs278130036;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	154994209	154994308	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:143863149;1allele=A/G;version=Hapmap1;RS=rs130413505;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	155108010	155108109	.	+	.	Name=Leaf_width;B73v2_pos=6:143958672;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	155108545	155108644	.	+	.	Name=Leaf_width;B73v2_pos=6:143959207;1allele=C/G;version=Hapmap2;RS=rs278130624;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	155126248	155126347	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:143976905;1allele=T/A;version=Hapmap1;RS=rs132338101;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	155126304	155126403	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:143976961;1allele=A/G;version=Hapmap1;RS=rs132338103;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	155126396	155126495	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:143977053;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	155138352	155138451	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:143989005;1allele=C/T;version=Hapmap2;RS=rs825559335;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	155152137	155152236	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:144002790;1allele=C/T;version=Hapmap2;RS=rs1064534748;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	155152241	155152340	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:144002894;1allele=T/C;version=Hapmap2;RS=rs828280798;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	155217822	155217921	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:144069468;1allele=C/T;version=Hapmap2;RS=rs836436345;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	155221995	155222094	.	+	.	Name=Tassel_length;B73v2_pos=6:144073642;1allele=A/T;version=Hapmap2;RS=rs1062513218;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	155223016	155223115	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:144074663;1allele=G/T;version=Hapmap2;RS=rs822332915;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	155224587	155224686	.	+	.	Name=Tassel_length;B73v2_pos=6:144076234;1allele=C/T;version=Hapmap2;RS=rs827246388;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	155322762	155322861	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:144190788;1allele=G/A;version=Hapmap2;RS=rs824269387;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	155500758	155500858	.	+	.	Name=Tassel_length;B73v2_pos=6:144378981;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	155559492	155559591	.	+	.	Name=Leaf_width;B73v2_pos=6:144437723;1allele=A/C;version=Hapmap2;RS=rs1060531973;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	155637669	155637768	.	+	.	Name=Leaf_width;B73v2_pos=6:144527189;1allele=T/C;version=Hapmap2;RS=rs130414452;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	155787978	155788077	.	+	.	Name=Leaf_width;B73v2_pos=6:144657806;1allele=A/G;version=Hapmap2;RS=rs130414610;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	155796322	155796421	.	+	.	Name=Leaf_width;B73v2_pos=6:144665282;1allele=G/T;version=Hapmap2;RS=rs132338676;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	155836355	155836454	.	+	.	Name=Tassel_length;B73v2_pos=6:144705326;1allele=G/A;version=Hapmap2;RS=rs806561199;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	155865245	155865344	.	+	.	Name=Leaf_width;B73v2_pos=6:144732998;1allele=G/T;version=Hapmap2;RS=rs726617443;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	155867866	155867965	.	+	.	Name=Leaf_width;B73v2_pos=6:144735619;1allele=G/T;version=Hapmap2;RS=rs726437380;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	155919837	155919936	.	+	.	Name=Leaf_width;B73v2_pos=6:144787595;1allele=A/G;version=Hapmap2;RS=rs726573675;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	156444228	156444327	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:145314336;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	156450525	156450624	.	+	.	Name=Leaf_width;B73v2_pos=6:145320631;1allele=A/G;version=Hapmap2;RS=rs849640759;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	156474088	156474186	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:145344194;1allele=C/T;version=Hapmap2;RS=rs849125486;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	156485650	156485749	.	+	.	Name=Leaf_width;B73v2_pos=6:145356167;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	156565751	156565850	.	+	.	Name=Leaf_width;B73v2_pos=6:145435339;1allele=T/C;version=Hapmap2;RS=rs278133131;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	156597930	156598029	.	+	.	Name=Plant_height;B73v2_pos=6:145467543;1allele=C/A;version=Hapmap2;RS=rs845427853;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	156619147	156619246	.	+	.	Name=Leaf_width;B73v2_pos=6:145488879;1allele=T/C;version=Hapmap2;RS=rs836604782;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	156684279	156684378	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:145529568;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	156702432	156702531	.	+	.	Name=Fructose;B73v2_pos=6:145635556;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	156875574	156875673	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:145753030;1allele=A/C;version=Hapmap2;RS=rs808990877;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	157040355	157040454	.	+	.	Name=100_Kernel_weight;B73v2_pos=2:28210728;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	157208718	157208817	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:146116419;1allele=T/C;version=Hapmap2;RS=rs827420302;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	157512383	157512482	.	+	.	Name=Height_above_ear;B73v2_pos=6:146422100;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	157785937	157786036	.	+	.	Name=Cob_diameter;B73v2_pos=6:146697018;1allele=G/T;version=Hapmap2;RS=rs278134924;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	157901098	157901197	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:146818700;1allele=C/T;version=Hapmap2;RS=rs278135206;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	157901103	157901202	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:146818705;1allele=C/T;version=Hapmap2;RS=rs278135207;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	158043012	158043111	.	+	.	Name=Leaf_width;B73v2_pos=6:146959633;1allele=G/T;version=Hapmap2;RS=rs278135852;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	158100778	158100877	.	+	.	Name=Leaf_length;B73v2_pos=6:147017397;1allele=T/C;version=Hapmap2;RS=rs130417883;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	158115930	158116029	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:147033462;1allele=/TCCCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	158199215	158199314	.	+	.	Name=Height_above_ear;B73v2_pos=6:147116819;1allele=C/T;version=Hapmap2;RS=rs847085826;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	158226097	158226196	.	+	.	Name=Height_above_ear;B73v2_pos=6:147143704;1allele=A/G;version=Hapmap2;RS=rs832203666;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	158267804	158267903	.	+	.	Name=Ear_height;B73v2_pos=3:165576216;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	158302491	158302590	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:147219767;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	158304161	158304260	.	+	.	Name=Height_above_ear;B73v2_pos=6:147221437;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	158411010	158411109	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:147317561;1allele=C/T;version=Hapmap2;RS=rs725338784;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	158411456	158411555	.	+	.	Name=Plant_height;B73v2_pos=6:147318007;1allele=C/A;version=Hapmap2;RS=rs278136873;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	158501923	158502022	.	+	.	Name=Leaf_width;B73v2_pos=6:147408182;1allele=A/C;version=Hapmap2;RS=rs278137008;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	158590237	158590336	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:147496445;1allele=C/T;version=Hapmap2;RS=rs1061463300;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	158637369	158637468	.	+	.	Name=Height_above_ear;B73v2_pos=6:147543578;1allele=C/T;version=Hapmap2;RS=rs801773079;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	158638497	158638596	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:147544706;1allele=A/G;version=Hapmap2;RS=rs816345834;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	158758203	158758302	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:147660912;1allele=G/A;version=Hapmap2;RS=rs847978003;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	158844950	158845049	.	+	.	Name=Height_above_ear;B73v2_pos=6:147807818;1allele=C/T;version=Hapmap2;RS=rs819780445;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	159088739	159088838	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:147974624;1allele=C/A;version=Hapmap2;RS=rs132342673;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	159090364	159090463	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:147976249;1allele=G/A;version=Hapmap2;RS=rs278138591;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	159100240	159100339	.	+	.	Name=Plant_height;B73v2_pos=6:147985960;1allele=C/T;version=Hapmap2;RS=rs808226648;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	159100240	159100339	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:147985960;1allele=C/T;version=Hapmap2;RS=rs808226648;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	159212151	159212250	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:148103364;1allele=A/G;version=Hapmap2;RS=rs818040473;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	159222632	159222731	.	+	.	Name=Tassel_length;B73v2_pos=6:148113841;1allele=T/C;version=Hapmap2;RS=rs278138727;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	159223181	159223280	.	+	.	Name=Tassel_length;B73v2_pos=6:148114390;1allele=G/A;version=Hapmap2;RS=rs844432567;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	159249194	159249293	.	+	.	Name=Height_above_ear;B73v2_pos=3:185556453;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	159256681	159256780	.	+	.	Name=Tassel_length;B73v2_pos=6:148145950;1allele=G/T;version=Hapmap2;RS=rs278138805;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	159356666	159356765	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:148251011;1allele=T/C;version=Hapmap1;RS=rs132342995;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	159650714	159650813	.	+	.	Name=Leaf_width;B73v2_pos=6:148589103;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	159688905	159689004	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:148516996;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	159777521	159777620	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:148677408;1allele=A/G;version=Hapmap2;RS=rs827097417;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	159879083	159879182	.	+	.	Name=Tassel_length;B73v2_pos=6:148777649;1allele=C/T;version=Hapmap1;RS=rs132343592;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	159885413	159885512	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:148783979;1allele=A/G;version=Hapmap2;RS=rs805654973;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	159913569	159913668	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:148831747;1allele=C/G;version=Hapmap2;RS=rs278139717;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	160080543	160080642	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:148962526;1allele=C/A;version=Hapmap2;RS=rs845475895;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	160249373	160249472	.	+	.	Name=Tassel_length;B73v2_pos=6:149127597;1allele=G/T;version=Hapmap2;RS=rs808627766;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	160250292	160250391	.	+	.	Name=Tassel_length;B73v2_pos=6:149128516;1allele=T/A;version=Hapmap2;RS=rs840379214;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	160378267	160378366	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149285780;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	160380717	160380816	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149283330;1allele=C/A;version=Hapmap2;RS=rs1061342935;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	160384673	160384772	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149279126;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	160404726	160404825	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149260018;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	160405190	160405289	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149259554;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	160413156	160413255	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149252044;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	160454329	160454428	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149332718;1allele=A/G;version=Hapmap2;RS=rs130421623;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	160454557	160454656	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:149332946;1allele=C/A;version=Hapmap2;RS=rs278140405;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	160496436	160496535	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:149373017;1allele=A/C;version=Hapmap2;RS=rs278140562;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	160496573	160496672	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:149373154;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	160496790	160496889	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:149373371;1allele=G/A;version=Hapmap2;RS=rs806391640;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	160499468	160499567	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:149376049;1allele=T/C;version=Hapmap2;RS=rs278140593;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	160499482	160499581	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:149376063;1allele=G/A;version=Hapmap2;RS=rs278140594;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	160542826	160542925	.	+	.	Name=Tassel_length;B73v2_pos=6:149420178;1allele=G/A;version=Hapmap2;RS=rs278140707;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	160547304	160547403	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:149424661;1allele=G/T;version=Hapmap2;RS=rs834648968;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	160547305	160547404	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:149424662;1allele=T/C;version=Hapmap2;RS=rs819855359;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	160552479	160552578	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149429837;1allele=A/T;version=Hapmap2;RS=rs823180556;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	160598059	160598158	.	+	.	Name=Tassel_length;B73v2_pos=6:149475582;1allele=T/C;version=Hapmap2;RS=rs130422101;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	160696245	160696344	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:149569338;1allele=C/T;version=Hapmap2;RS=rs831298137;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	160813107	160813206	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149686205;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	160816602	160816701	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:149689700;1allele=T/C;version=Hapmap2;RS=rs726050333;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	160908985	160909084	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149759100;1allele=T/C;version=Hapmap2;RS=rs831912874;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	160929596	160929695	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149779712;1allele=G/C;version=Hapmap2;RS=rs806435588;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	160944225	160944324	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:149795021;1allele=A/C;version=Hapmap2;RS=rs825960926;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	160979503	160979602	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:149830304;1allele=T/A;version=Hapmap2;RS=rs726545433;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	160979966	160980065	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:149830767;1allele=T/C;version=Hapmap2;RS=rs849158321;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	161007781	161007880	.	+	.	Name=Malate;B73v2_pos=2:28910745;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	161193465	161193564	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:150059985;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	161307116	161307215	.	+	.	Name=Tassel_length;B73v2_pos=6:150174905;1allele=C/T;version=Hapmap2;RS=rs1063613519;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	161349675	161349774	.	+	.	Name=Tassel_length;B73v2_pos=6:150223693;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	161412815	161412914	.	+	.	Name=Tassel_length;B73v2_pos=6:150286886;1allele=A/C;version=Hapmap2;RS=rs130423183;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	161431442	161431541	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:150305233;1allele=T/C;version=Hapmap2;RS=rs813608982;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	161561293	161561392	.	+	.	Name=Tassel_length;B73v2_pos=6:150424902;1allele=C/T;version=Hapmap2;RS=rs823734196;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	161622825	161622924	.	+	.	Name=Leaf_width;B73v2_pos=6:150486443;1allele=A/G;version=Hapmap2;RS=rs815103408;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	161625536	161625635	.	+	.	Name=Tassel_length;B73v2_pos=6:150489154;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	161788439	161788538	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:150629391;1allele=T/A;version=Hapmap2;RS=rs842086749;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	161824217	161824316	.	+	.	Name=Tassel_length;B73v2_pos=6:150665171;1allele=A/T;version=Hapmap2;RS=rs816853616;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	161827872	161827971	.	+	.	Name=Tassel_length;B73v2_pos=6:150668826;1allele=C/A;version=Hapmap2;RS=rs278142896;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	161900677	161900776	.	+	.	Name=Leaf_width;B73v2_pos=6:150742294;1allele=C/-;version=Hapmap1;RS=rs132346499;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	161907255	161907354	.	+	.	Name=Leaf_width;B73v2_pos=6:150748872;1allele=A/T;version=Hapmap1;RS=rs132346554;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	161930505	161930604	.	+	.	Name=Tassel_length;B73v2_pos=6:150773234;1allele=T/C;version=Hapmap2;RS=rs278143241;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	161932553	161932652	.	+	.	Name=Tassel_length;B73v2_pos=6:150775282;1allele=A/G;version=Hapmap2;RS=rs834541334;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	161934620	161934719	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:150777349;1allele=G/T;version=Hapmap2;RS=rs850443631;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	161935429	161935528	.	+	.	Name=Tassel_length;B73v2_pos=6:150778158;1allele=C/A;version=Hapmap1;RS=rs132346721;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	161962090	161962189	.	+	.	Name=Tassel_length;B73v2_pos=6:150804820;1allele=A/G;version=Hapmap1;RS=rs132346931;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	161994650	161994749	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:150844680;1allele=C/A;version=Hapmap2;RS=rs836475452;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	162157955	162158054	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:150986524;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	162189700	162189799	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:151016282;1allele=A/G;version=Hapmap2;RS=rs1063456975;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	162215096	162215195	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:151038774;1allele=T/C;version=Hapmap2;RS=rs817535442;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	162249852	162249951	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:151070362;1allele=A/G;version=Hapmap2;RS=rs1064154147;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	162313024	162313123	.	+	.	Name=Height_above_ear;B73v2_pos=6:151125285;1allele=C/A;version=Hapmap2;RS=rs825997979;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	162362395	162362494	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:151173868;1allele=G/A;version=Hapmap2;RS=rs130424568;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	162389718	162389817	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:151201198;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	162630278	162630377	.	+	.	Name=Ear_row_number;B73v2_pos=6:151450651;1allele=G/A;version=Hapmap2;RS=rs832135414;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	162637073	162637172	.	+	.	Name=Ear_row_number;B73v2_pos=6:151457446;1allele=T/C;version=Hapmap2;RS=rs130425188;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	162638035	162638134	.	+	.	Name=Ear_row_number;B73v2_pos=6:151458408;1allele=A/C;version=Hapmap2;RS=rs1064498111;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	162638367	162638466	.	+	.	Name=Ear_row_number;B73v2_pos=6:151458740;1allele=A/G;version=Hapmap2;RS=rs130425211;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	162641051	162641150	.	+	.	Name=Ear_row_number;B73v2_pos=6:151461424;1allele=C/T;version=Hapmap2;RS=rs829662528;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	162641066	162641165	.	+	.	Name=Ear_row_number;B73v2_pos=6:151461439;1allele=A/C;version=Hapmap2;RS=rs821724920;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	162641187	162641286	.	+	.	Name=Ear_row_number;B73v2_pos=6:151461560;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	162642777	162642876	.	+	.	Name=Cob_diameter;B73v2_pos=6:151463150;1allele=C/G;version=Hapmap2;RS=rs821971120;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	162803913	162804012	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:151644972;1allele=C/G;version=Hapmap2;RS=rs821788102;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	162872141	162872240	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:151713061;1allele=A/G;version=Hapmap2;RS=rs840368694;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	162948068	162948167	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:151789107;1allele=G/A;version=Hapmap2;RS=rs278145345;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	162980057	162980156	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:151822001;1allele=A/G;version=Hapmap2;RS=rs836735173;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	163029145	163029244	.	+	.	Name=Plant_height;B73v2_pos=6:151870605;1allele=G/T;version=Hapmap2;RS=rs278145478;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	163065961	163066060	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:151930450;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	163223773	163223872	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:152073103;1allele=C/T;version=Hapmap1;RS=rs132348433;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	163276377	163276476	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:152123766;1allele=T/G;version=Hapmap2;RS=rs814984192;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	163276673	163276772	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152124062;1allele=T/C;version=Hapmap2;RS=rs837897354;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	163329238	163329337	.	+	.	Name=Plant_height;B73v2_pos=6:152177394;1allele=C/T;version=Hapmap1;RS=rs132348670;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	163409911	163410010	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:152258578;1allele=C/T;version=Hapmap2;RS=rs832418944;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	163413511	163413610	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152262178;1allele=T/G;version=Hapmap2;RS=rs1064474132;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	163438762	163438861	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:152287375;1allele=G/A;version=Hapmap2;RS=rs132348895;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	163472154	163472253	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:152308114;1allele=G/A;version=Hapmap1;RS=rs132348987;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	163634607	163634706	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:152462045;1allele=A/G;version=Hapmap1;RS=rs132349090;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	163640937	163641036	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:152468375;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	163641478	163641577	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:152468916;1allele=A/G;version=Hapmap2;RS=rs808490663;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	163659536	163659635	.	+	.	Name=Ear_row_number;B73v2_pos=6:152486976;1allele=G/A;version=Hapmap2;RS=rs804847543;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	163759555	163759654	.	+	.	Name=Days_to_silk;B73v2_pos=6:152584386;1allele=C/T;version=Hapmap2;RS=rs818042550;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	163818558	163818657	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:152633470;1allele=A/G;version=Hapmap2;RS=rs130427097;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	163833394	163833493	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:152648307;1allele=A/G;version=Hapmap2;RS=rs130427125;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	163867638	163867737	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:152682457;1allele=T/A;version=Hapmap1;RS=rs132349347;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	163883510	163883609	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:152698333;1allele=T/C;version=Hapmap2;RS=rs815597720;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	163954833	163954932	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:152841320;1allele=G/A;version=Hapmap2;RS=rs132349504;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	164006698	164006797	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152774485;1allele=C/T;version=Hapmap2;RS=rs278147352;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	164007960	164008059	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152773223;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164032367	164032466	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152748680;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164090226	164090325	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152898718;1allele=C/T;version=Hapmap2;RS=rs816085430;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164100479	164100578	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152908971;1allele=T/C;version=Hapmap2;RS=rs818594377;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	164100835	164100934	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152909327;1allele=T/G;version=Hapmap2;RS=rs824809156;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	164102738	164102837	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152911230;1allele=C/G;version=Hapmap2;RS=rs844220953;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	164112737	164112836	.	+	.	Name=Cob_diameter;B73v2_pos=6:152921231;1allele=G/A;version=Hapmap2;RS=rs818806394;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	164113015	164113114	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152921509;1allele=T/C;version=Hapmap2;RS=rs815145744;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	164113268	164113367	.	+	.	Name=Cob_diameter;B73v2_pos=6:152921762;1allele=G/A;version=Hapmap2;RS=rs822419320;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	164118402	164118501	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:152926896;1allele=A/C;version=Hapmap2;RS=rs823697627;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	164123719	164123818	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:152932213;1allele=G/A;version=Hapmap2;RS=rs278147547;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	164157219	164157318	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:152965006;1allele=T/C;version=Hapmap2;RS=rs278147596;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	164157220	164157319	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:152965007;1allele=C/T;version=Hapmap2;RS=rs278147597;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164190496	164190595	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:152998454;1allele=A/T;version=Hapmap2;RS=rs850517581;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	164264969	164265068	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:153088673;1allele=A/C;version=Hapmap2;RS=rs130428086;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	164268483	164268582	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:153092187;1allele=C/T;version=Hapmap2;RS=rs725577484;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164289599	164289698	.	+	.	Name=Tassel_length;B73v2_pos=6:153113304;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164325444	164325543	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153139004;1allele=T/G;version=Hapmap2;RS=rs822832046;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	164332965	164333064	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:153146512;1allele=T/C;version=Hapmap2;RS=rs828560607;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	164378761	164378860	.	+	.	Name=Cob_diameter;B73v2_pos=6:153192957;1allele=A/C;version=Hapmap2;RS=rs838381401;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	164386697	164386796	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153200895;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164408828	164408927	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:153217538;1allele=C/T;version=Hapmap2;RS=rs827130618;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164422149	164422248	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:153230859;1allele=C/T;version=Hapmap2;RS=rs846978461;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164456036	164456135	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:153264570;1allele=C/T;version=Hapmap2;RS=rs817897201;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	164493279	164493378	.	+	.	Name=Plant_height;B73v2_pos=6:153357639;1allele=G/-;version=Hapmap1;RS=rs833410901;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	164493279	164493378	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:153357639;1allele=G/-;version=Hapmap1;RS=rs833410901;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	164494755	164494854	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:153356163;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164528698	164528797	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153306565;1allele=G/T;version=Hapmap2;RS=rs831883374;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	164528734	164528833	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153306601;1allele=C/T;version=Hapmap2;RS=rs825729504;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164530253	164530352	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153308120;1allele=T/C;version=Hapmap2;RS=rs278148158;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	164641300	164641399	.	+	.	Name=Plant_height;B73v2_pos=6:153450078;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164641300	164641399	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:153450078;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164800395	164800494	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:153604937;1allele=T/G;version=Hapmap2;RS=rs834733321;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	164821635	164821734	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:153624657;1allele=G/T;version=Hapmap2;RS=rs724660563;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	164821654	164821753	.	+	.	Name=Plant_height;B73v2_pos=6:153624676;1allele=T/C;version=Hapmap2;RS=rs132350840;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164821654	164821753	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:153624676;1allele=T/C;version=Hapmap2;RS=rs132350840;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164858653	164858752	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:153661674;1allele=C/T;version=Hapmap2;RS=rs132350980;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164861259	164861358	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153664280;1allele=A/G;version=Hapmap2;RS=rs844188591;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	164931319	164931418	.	+	.	Name=Height_above_ear;B73v2_pos=6:153734505;1allele=T/C;version=Hapmap2;RS=rs835296052;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	164940140	164940239	.	+	.	Name=Height_above_ear;B73v2_pos=6:153743325;1allele=G/A;version=Hapmap2;RS=rs130429434;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	164945511	164945610	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:153748696;1allele=G/A;version=Hapmap2;RS=rs815182133;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	164956868	164956967	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:153759959;1allele=C/A;version=Hapmap1;RS=rs132351152;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	164956899	164956998	.	+	.	Name=Ear_row_number;B73v2_pos=6:153759990;1allele=/CTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164958708	164958807	.	+	.	Name=Height_above_ear;B73v2_pos=6:153761799;1allele=/CG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164958734	164958833	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:153761825;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164959015	164959114	.	+	.	Name=Plant_height;B73v2_pos=6:153762106;1allele=C/G;version=Hapmap1;RS=rs132351199;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	164959016	164959115	.	+	.	Name=Plant_height;B73v2_pos=6:153762107;1allele=C/G;version=Hapmap1;RS=rs132351200;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164962420	164962519	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:153765417;1allele=A/G;version=Hapmap2;RS=rs130429519;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	164963336	164963435	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:153766333;1allele=/TACT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164964286	164964385	.	+	.	Name=Plant_height;B73v2_pos=6:153767283;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	164966149	164966248	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:153769146;1allele=T/G;version=Hapmap2;RS=rs811462703;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	164993634	164993733	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153796631;1allele=C/T;version=Hapmap1;RS=rs724720553;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	164994142	164994241	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153797139;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165002137	165002236	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153805056;1allele=G/A;version=Hapmap2;RS=rs278148873;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	165003633	165003732	.	+	.	Name=Leaf_length;B73v2_pos=6:153806552;1allele=C/G;version=Hapmap2;RS=rs829844121;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	165003726	165003825	.	+	.	Name=Leaf_length;B73v2_pos=6:153806645;1allele=C/T;version=Hapmap2;RS=rs1064753280;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	165003764	165003863	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:153806683;1allele=G/T;version=Hapmap2;RS=rs1061007592;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	165050639	165050710	.	+	.	Name=Leaf_length;B73v2_pos=6:153873733;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165050703	165050801	.	+	.	Name=Leaf_length;B73v2_pos=6:153873825;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165050746	165050845	.	+	.	Name=Leaf_length;B73v2_pos=6:153873869;1allele=T/C;version=Hapmap2;RS=rs726153441;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	165051038	165051137	.	+	.	Name=Leaf_length;B73v2_pos=6:153874161;1allele=A/T;version=Hapmap2;RS=rs1064660744;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	165052469	165052568	.	+	.	Name=Leaf_length;B73v2_pos=6:153875592;1allele=A/G;version=Hapmap2;RS=rs1062401535;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	165052754	165052853	.	+	.	Name=Leaf_length;B73v2_pos=6:153875877;1allele=T/G;version=Hapmap2;RS=rs1061045321;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	165053062	165053161	.	+	.	Name=Leaf_length;B73v2_pos=6:153876185;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165053419	165053518	.	+	.	Name=Leaf_length;B73v2_pos=6:153876542;1allele=C/T;version=Hapmap2;RS=rs132351476;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	165055593	165055692	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:153878716;1allele=A/T;version=Hapmap2;RS=rs841953957;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	165064052	165064151	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153887175;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165075139	165075238	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153836782;1allele=T/G;version=Hapmap2;RS=rs130429679;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	165075338	165075437	.	+	.	Name=Tassel_length;B73v2_pos=6:153836981;1allele=C/A;version=Hapmap2;RS=rs130429681;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	165078262	165078361	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:153839905;1allele=G/T;version=Hapmap2;RS=rs1061170343;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	165078659	165078758	.	+	.	Name=Ear_row_number;B73v2_pos=6:153840302;1allele=T/A;version=Hapmap2;RS=rs278148926;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	165078807	165078906	.	+	.	Name=Ear_row_number;B73v2_pos=6:153840450;1allele=A/C;version=Hapmap2;RS=rs130429715;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	165085091	165085190	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:153846734;1allele=A/G;version=Hapmap2;RS=rs819916992;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	165138138	165138237	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:153941535;1allele=C/T;version=Hapmap2;RS=rs819522755;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	165172714	165172813	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:153960427;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165263352	165263451	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:154062966;1allele=A/G;version=Hapmap2;RS=rs1060718621;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	165331527	165331626	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:154132401;1allele=G/C;version=Hapmap1;RS=rs132351717;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	165335279	165335378	.	+	.	Name=Leaf_width;B73v2_pos=6:154136153;1allele=G/T;version=Hapmap2;RS=rs278149256;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	165345963	165346062	.	+	.	Name=Leaf_length;B73v2_pos=6:154237960;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165360422	165360521	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:154152484;1allele=C/A;version=Hapmap2;RS=rs812778026;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	165367642	165367741	.	+	.	Name=Ear_height;B73v2_pos=6:154159138;1allele=G/A;version=Hapmap1;RS=rs130430344;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	165368463	165368562	.	+	.	Name=Leaf_width;B73v2_pos=6:154159959;1allele=G/T;version=Hapmap1;RS=rs132351865;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	165368559	165368658	.	+	.	Name=Leaf_width;B73v2_pos=6:154160055;1allele=G/A;version=Hapmap1;RS=rs130430350;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	165369148	165369247	.	+	.	Name=Ear_height;B73v2_pos=6:154160644;1allele=G/A;version=Hapmap1;RS=rs130430356;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	165370637	165370736	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:154162133;1allele=G/A;version=Hapmap2;RS=rs839242430;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	165371259	165371358	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:154162755;1allele=G/A;version=Hapmap2;RS=rs818631966;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	165377007	165377106	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:154168503;1allele=A/G;version=Hapmap2;RS=rs810264404;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	165377007	165377106	.	+	.	Name=Ear_height;B73v2_pos=6:154168503;1allele=A/G;version=Hapmap2;RS=rs810264404;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	165398409	165398508	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:154193175;1allele=C/T;version=Hapmap2;RS=rs810012997;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	165448234	165448333	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:154255498;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165485629	165485728	.	+	.	Name=Cob_diameter;B73v2_pos=6:154282713;1allele=T/C;version=Hapmap2;RS=rs726379020;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	165510034	165510133	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:154307120;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165514694	165514793	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:154311780;1allele=C/T;version=Hapmap2;RS=rs820524743;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	165517087	165517186	.	+	.	Name=Plant_height;B73v2_pos=6:154314173;1allele=G/C;version=Hapmap1;RS=rs132352091;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	165525632	165525731	.	+	.	Name=Height_above_ear;B73v2_pos=6:154322655;1allele=A/G;version=Hapmap2;RS=rs836006711;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	165530720	165530819	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:154327743;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165530840	165530939	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:154327863;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165532154	165532253	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:154329177;1allele=T/G;version=Hapmap2;RS=rs803661527;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	165533463	165533562	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:154330486;1allele=T/C;version=Hapmap2;RS=rs820223651;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	165542945	165543044	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:154339963;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	165549662	165549761	.	+	.	Name=Leaf_length;B73v2_pos=6:154346680;1allele=G/A;version=Hapmap2;RS=rs130430821;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	165791497	165791597	.	+	.	Name=Height_above_ear;B73v2_pos=6:154678748;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166120652	166120751	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:154638206;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166120652	166120751	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:154638206;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166120826	166120925	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:154638032;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166120826	166120925	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:154638032;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166127370	166127469	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:154631709;1allele=T/C;version=Hapmap2;RS=rs840164569;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166128111	166128210	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:154630968;1allele=T/C;version=Hapmap2;RS=rs828252341;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166128111	166128210	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:154630968;1allele=T/C;version=Hapmap2;RS=rs828252341;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166141030	166141129	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:154626181;1allele=T/C;version=Hapmap2;RS=rs724202724;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166141307	166141406	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:154625904;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166141307	166141406	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:154625904;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166143478	166143577	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:154623733;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166146204	166146303	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:154621007;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166176923	166177022	.	+	.	Name=Leaf_length;B73v2_pos=6:154801172;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166218824	166218923	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:154785279;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166232594	166232693	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:154771427;1allele=+/-;version=Hapmap2;RS=rs812463549;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	166232596	166232695	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:154771425;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166278241	166278340	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:154838828;1allele=A/G;version=Hapmap2;RS=rs845615651;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	166422731	166422830	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:154975870;1allele=T/C;version=Hapmap2;RS=rs841771607;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166435479	166435578	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:154988619;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166436103	166436202	.	+	.	Name=Leaf_length;B73v2_pos=6:154989243;1allele=G/T;version=Hapmap2;RS=rs1060706562;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166457054	166457153	.	+	.	Name=Leaf_length;B73v2_pos=6:155011371;1allele=C/T;version=Hapmap1;RS=rs278150572;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166461403	166461502	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:155015720;1allele=A/G;version=Hapmap2;RS=rs821884804;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166462424	166462523	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:155016741;1allele=G/T;version=Hapmap2;RS=rs830002316;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166465352	166465451	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:155019669;1allele=A/G;version=Hapmap1;RS=rs132353015;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	166508777	166508876	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:155063096;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166597584	166597683	.	+	.	Name=Ear_height;B73v2_pos=6:155141164;1allele=A/G;version=Hapmap2;RS=rs818968894;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	166633226	166633325	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:155177231;1allele=C/G;version=Hapmap1;RS=rs848706793;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	166650288	166650387	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:155194293;1allele=G/A;version=Hapmap2;RS=rs817427920;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166650675	166650774	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:155194680;1allele=T/G;version=Hapmap2;RS=rs725225388;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166655790	166655889	.	+	.	Name=Ear_height;B73v2_pos=6:155199795;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166671523	166671622	.	+	.	Name=Plant_height;B73v2_pos=6:155215529;1allele=A/G;version=Hapmap2;RS=rs130432321;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166671540	166671639	.	+	.	Name=Ear_height;B73v2_pos=6:155215546;1allele=A/T;version=Hapmap2;RS=rs839509016;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	166671754	166671853	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155215760;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166672070	166672169	.	+	.	Name=Height_above_ear;B73v2_pos=6:155216076;1allele=T/C;version=Hapmap2;RS=rs804023016;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	166673216	166673315	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:155217222;1allele=C/G;version=Hapmap1;RS=rs130432336;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	166673236	166673335	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155217242;1allele=T/C;version=Hapmap1;RS=rs132353364;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	166674574	166674673	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155218580;1allele=G/A;version=Hapmap1;RS=rs132353378;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166674740	166674839	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155218746;1allele=T/G;version=Hapmap1;RS=rs132353379;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166674885	166674984	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155218891;1allele=C/T;version=Hapmap2;RS=rs278150946;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	166675416	166675515	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155219422;1allele=A/C;version=Hapmap2;RS=rs278150954;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	166696705	166696804	.	+	.	Name=Ear_height;B73v2_pos=6:155240711;1allele=T/G;version=Hapmap2;RS=rs836622808;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166696705	166696804	.	+	.	Name=Plant_height;B73v2_pos=6:155240711;1allele=T/G;version=Hapmap2;RS=rs836622808;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166698891	166698990	.	+	.	Name=Height_above_ear;B73v2_pos=6:155242898;1allele=G/A;version=Hapmap2;RS=rs832733348;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166855705	166855804	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155395205;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166863835	166863934	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155403335;1allele=G/A;version=Hapmap2;RS=rs278151337;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166864230	166864329	.	+	.	Name=Plant_height;B73v2_pos=6:155403730;1allele=G/C;version=Hapmap2;RS=rs1063958162;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	166899394	166899493	.	+	.	Name=Cob_diameter;B73v2_pos=6:155438923;1allele=C/T;version=Hapmap2;RS=rs278151422;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166900994	166901093	.	+	.	Name=Ear_height;B73v2_pos=6:155440523;1allele=G/A;version=Hapmap2;RS=rs838943789;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	166901396	166901495	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:155440925;1allele=T/C;version=Hapmap2;RS=rs130432764;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	166911782	166911881	.	+	.	Name=Leaf_length;B73v2_pos=6:155451311;1allele=/AG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	166914916	166915015	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155454445;1allele=C/G;version=Hapmap2;RS=rs278151493;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	166919579	166919678	.	+	.	Name=Starch;B73v2_pos=6:155459108;1allele=G/T;version=Hapmap2;RS=rs822537380;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	166969403	166969502	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:155508945;1allele=T/C;version=Hapmap2;RS=rs132353811;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166969874	166969973	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:155509416;1allele=C/T;version=Hapmap2;RS=rs132353829;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166972196	166972295	.	+	.	Name=Plant_height;B73v2_pos=6:155511738;1allele=A/T;version=Hapmap2;RS=rs278151663;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166972196	166972295	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:155511738;1allele=A/T;version=Hapmap2;RS=rs278151663;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	166972214	166972313	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:155511756;1allele=A/G;version=Hapmap2;RS=rs1062995684;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	166976167	166976266	.	+	.	Name=Plant_height;B73v2_pos=6:155515708;1allele=C/T;version=Hapmap2;RS=rs130433101;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	166979622	166979721	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155519163;1allele=C/T;version=Hapmap2;RS=rs826202840;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166980647	166980746	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155520188;1allele=C/T;version=Hapmap2;RS=rs824977412;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166982175	166982274	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155521716;1allele=C/T;version=Hapmap2;RS=rs841117312;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166982771	166982870	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155522312;1allele=C/T;version=Hapmap2;RS=rs130433163;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	166982939	166983038	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155522480;1allele=A/G;version=Hapmap1;RS=rs132353886;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	166983048	166983147	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155522589;1allele=G/A;version=Hapmap2;RS=rs833378614;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	167084420	167084519	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:155627140;1allele=C/T;version=Hapmap2;RS=rs130433396;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	167088874	167088973	.	+	.	Name=Ear_height;B73v2_pos=6:155631594;1allele=A/G;version=Hapmap2;RS=rs838086665;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	167088992	167089091	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:155631712;1allele=T/C;version=Hapmap2;RS=rs824151996;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	167089407	167089506	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:155632127;1allele=C/T;version=Hapmap2;RS=rs132354229;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167101794	167101893	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:155644514;1allele=A/G;version=Hapmap2;RS=rs822665353;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	167150939	167151038	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:155688029;1allele=T/C;version=Hapmap2;RS=rs813864461;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	167210611	167210710	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:155761527;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	167296819	167296918	.	+	.	Name=Leaf_length;B73v2_pos=6:155838715;1allele=C/G;version=Hapmap2;RS=rs278152123;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	167301891	167301990	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:155843787;1allele=A/G;version=Hapmap2;RS=rs808238067;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	167401788	167401887	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:155948290;1allele=T/G;version=Hapmap2;RS=rs848579586;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	167489453	167489552	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:156037701;1allele=C/T;version=Hapmap2;RS=rs130434084;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	167489460	167489559	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:156037708;1allele=C/T;version=Hapmap2;RS=rs130434085;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	167489595	167489694	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:156037843;1allele=T/C;version=Hapmap2;RS=rs130434086;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167660627	167660726	.	+	.	Name=Plant_height;B73v2_pos=6:156210674;1allele=A/G;version=Hapmap2;RS=rs132355055;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	167661064	167661163	.	+	.	Name=Plant_height;B73v2_pos=6:156211111;1allele=C/G;version=Hapmap2;RS=rs825154313;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	167662026	167662125	.	+	.	Name=Ear_height;B73v2_pos=6:156212073;1allele=A/G;version=Hapmap2;RS=rs818693620;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	167664726	167664825	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:156214773;1allele=A/C;version=Hapmap2;RS=rs130434463;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	167701136	167701235	.	+	.	Name=Plant_height;B73v2_pos=6:156248753;1allele=C/T;version=Hapmap2;RS=rs803496067;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167701141	167701240	.	+	.	Name=Plant_height;B73v2_pos=6:156248758;1allele=G/C;version=Hapmap2;RS=rs832658983;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	167701155	167701254	.	+	.	Name=Plant_height;B73v2_pos=6:156248772;1allele=G/C;version=Hapmap2;RS=rs132355103;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	167701221	167701320	.	+	.	Name=Plant_height;B73v2_pos=6:156248838;1allele=C/G;version=Hapmap1;RS=rs132355106;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	167701587	167701686	.	+	.	Name=Plant_height;B73v2_pos=6:156249204;1allele=T/G;version=Hapmap1;RS=rs132355126;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	167701605	167701704	.	+	.	Name=Plant_height;B73v2_pos=6:156249222;1allele=C/T;version=Hapmap1;RS=rs132355128;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167739278	167739377	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:156286846;1allele=G/A;version=Hapmap2;RS=rs1062201315;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	167804160	167804259	.	+	.	Name=Plant_height;B73v2_pos=6:156350345;1allele=G/A;version=Hapmap2;RS=rs806140153;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	167826627	167826726	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:156372717;1allele=C/T;version=Hapmap2;RS=rs130434766;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167839013	167839112	.	+	.	Name=Starch;B73v2_pos=6:156382272;1allele=G/A;version=Hapmap2;RS=rs838187198;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	167839771	167839867	.	+	.	Name=Starch;B73v2_pos=6:156383030;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	167840081	167840180	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:156383343;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	167841492	167841591	.	+	.	Name=Ear_row_number;B73v2_pos=6:156384754;1allele=G/A;version=Hapmap2;RS=rs824602302;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	167843993	167844092	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:156387255;1allele=A/G;version=Hapmap1;RS=rs132355345;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	167854882	167854981	.	+	.	Name=Leaf_length;B73v2_pos=6:156398137;1allele=C/A;version=Hapmap1;RS=rs132355474;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	167857707	167857806	.	+	.	Name=Leaf_length;B73v2_pos=6:156400962;1allele=C/T;version=Hapmap2;RS=rs130434875;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	167858386	167858485	.	+	.	Name=Ear_height;B73v2_pos=6:156401641;1allele=A/G;version=Hapmap2;RS=rs835840649;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	167893797	167893896	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:156437334;1allele=G/A;version=Hapmap1;RS=rs132355605;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167893797	167893896	.	+	.	Name=Plant_height;B73v2_pos=6:156437334;1allele=G/A;version=Hapmap1;RS=rs132355605;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167903844	167903943	.	+	.	Name=Leaf_length;B73v2_pos=6:156446724;1allele=G/A;version=Hapmap2;RS=rs818783913;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	167951161	167951256	.	+	.	Name=Plant_height;B73v2_pos=6:156491499;1allele=C/T;version=Hapmap2;RS=rs850388757;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	167979832	167979931	.	+	.	Name=Plant_height;B73v2_pos=6:156521242;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	167980882	167980981	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:156522292;1allele=A/C;version=Hapmap2;RS=rs811736381;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	167980945	167981044	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:156522355;1allele=A/G;version=Hapmap1;RS=rs132355651;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	167980947	167981046	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:156522357;1allele=T/G;version=Hapmap2;RS=rs132355652;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	167983482	167983581	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:156524892;1allele=C/A;version=Hapmap1;RS=rs130435062;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	167984802	167984901	.	+	.	Name=Leaf_length;B73v2_pos=6:156526797;1allele=C/T;version=Hapmap2;RS=rs821655232;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	168010933	168011032	.	+	.	Name=Leaf_length;B73v2_pos=6:156552929;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168010933	168011032	.	+	.	Name=Plant_height;B73v2_pos=6:156552929;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168010950	168011049	.	+	.	Name=Leaf_length;B73v2_pos=6:156552946;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168011321	168011420	.	+	.	Name=Plant_height;B73v2_pos=6:156553317;1allele=G/T;version=Hapmap2;RS=rs823510705;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	168011425	168011524	.	+	.	Name=Leaf_length;B73v2_pos=6:156553421;1allele=G/A;version=Hapmap2;RS=rs130435102;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	168011475	168011574	.	+	.	Name=Leaf_length;B73v2_pos=6:156553471;1allele=A/G;version=Hapmap2;RS=rs130435104;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	168105706	168105805	.	+	.	Name=Plant_height;B73v2_pos=6:156645878;1allele=T/C;version=Hapmap2;RS=rs803576233;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	168207398	168207497	.	+	.	Name=Ear_height;B73v2_pos=6:156747232;1allele=G/T;version=Hapmap1;RS=rs278153016;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	168207509	168207608	.	+	.	Name=Ear_height;B73v2_pos=6:156747343;1allele=C/T;version=Hapmap2;RS=rs838232105;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	168208301	168208400	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:156748135;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168222716	168222815	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:156762550;1allele=+/-;version=Hapmap2;RS=rs823238130;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	168317678	168317777	.	+	.	Name=Ear_height;B73v2_pos=6:156838724;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168330557	168330656	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:156880295;1allele=G/A;version=Hapmap2;RS=rs816706486;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	168376628	168376727	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:156926841;1allele=G/C;version=Hapmap2;RS=rs278153230;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	168421459	168421558	.	+	.	Name=Days_to_silk;B73v2_pos=6:156971864;1allele=C/T;version=Hapmap2;RS=rs847352571;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	168430490	168430589	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:156981328;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168432852	168432951	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:156983690;1allele=G/A;version=Hapmap2;RS=rs130435921;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	168472324	168472423	.	+	.	Name=Leaf_length;B73v2_pos=6:157021067;1allele=ACG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168494010	168494109	.	+	.	Name=Tassel_length;B73v2_pos=6:157042926;1allele=A/C;version=Hapmap2;RS=rs805620310;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	168495593	168495692	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:157044515;1allele=C/G;version=Hapmap2;RS=rs130436091;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	168498141	168498240	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:157047066;1allele=C/T;version=Hapmap2;RS=rs821348242;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	168502206	168502305	.	+	.	Name=Ear_height;B73v2_pos=6:157051131;1allele=C/A;version=Hapmap2;RS=rs847078436;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	168503493	168503592	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:157052418;1allele=G/A;version=Hapmap2;RS=rs848781371;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	168503530	168503629	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:157052455;1allele=C/A;version=Hapmap2;RS=rs828667628;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	168503858	168503957	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:157052783;1allele=C/T;version=Hapmap2;RS=rs805398952;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	168526893	168526992	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:157077156;1allele=G/A;version=Hapmap2;RS=rs819675202;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	168555481	168555580	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:157091360;1allele=T/G;version=Hapmap2;RS=rs130436175;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	168556178	168556277	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:157092057;1allele=A/G;version=Hapmap2;RS=rs278153501;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	168556427	168556526	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:157092306;1allele=T/C;version=Hapmap2;RS=rs819130242;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	168581435	168581534	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:157125795;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168581523	168581622	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:157125707;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	168596802	168596901	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:157136370;1allele=T/G;version=Hapmap2;RS=rs130436270;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	168621365	168621464	.	+	.	Name=Plant_height;B73v2_pos=6:157160942;1allele=G/A;version=Hapmap2;RS=rs278153660;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	168627397	168627496	.	+	.	Name=Days_to_silk;B73v2_pos=6:157167133;1allele=T/A;version=Hapmap1;RS=rs803930026;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	168656900	168656999	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:157216378;1allele=C/G;version=Hapmap2;RS=rs130436359;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	168958026	168958125	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:157502186;1allele=A/C;version=Hapmap2;RS=rs827625977;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	169000638	169000737	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:157551279;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	169352852	169352951	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:157888060;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	169730832	169730931	.	+	.	Name=Height_above_ear;B73v2_pos=3:25669395;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	169760139	169760238	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:158272715;1allele=C/T;version=Hapmap2;RS=rs848662963;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	169910870	169910969	.	+	.	Name=Nitrate;B73v2_pos=6:158445255;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	169915868	169915967	.	+	.	Name=Height_above_ear;B73v2_pos=6:158450253;1allele=ATT/;version=Hapmap1;RS=rs847182338;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	169936219	169936318	.	+	.	Name=Nitrate;B73v2_pos=6:158470640;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	169937362	169937461	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:158471783;1allele=C/G;version=Hapmap2;RS=rs278155673;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	170070998	170071097	.	+	.	Name=Ear_row_number;B73v2_pos=6:158602825;1allele=G/A;version=Hapmap2;RS=rs130439973;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	170099415	170099514	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:158622202;1allele=A/G;version=Hapmap2;RS=rs278155870;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	170113439	170113538	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:158644902;1allele=G/C;version=Hapmap2;RS=rs278155926;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	170297382	170297481	.	+	.	Name=Days_to_silk;B73v2_pos=6:158827308;1allele=C/G;version=Hapmap2;RS=rs846699204;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	170319980	170320079	.	+	.	Name=Nitrate;B73v2_pos=2:215809832;1allele=A/G;version=Hapmap2;RS=rs842630418;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	170320858	170320957	.	+	.	Name=Days_to_silk;B73v2_pos=6:158848399;1allele=C/T;version=Hapmap2;RS=rs837533093;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	170320858	170320957	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:158848399;1allele=C/T;version=Hapmap2;RS=rs837533093;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	170537981	170538080	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:159010405;1allele=A/T;version=Hapmap2;RS=rs850313115;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	170541757	170541856	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:159014181;1allele=C/T;version=Hapmap2;RS=rs132359601;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	170543028	170543127	.	+	.	Name=Tassel_length;B73v2_pos=6:159015452;1allele=/GT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	170704817	170704916	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:159227434;1allele=T/C;version=Hapmap2;RS=rs825024081;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	170724872	170724971	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:159247812;1allele=T/C;version=Hapmap2;RS=rs132360241;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	170770197	170770296	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:159294218;1allele=C/G;version=Hapmap2;RS=rs845077777;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	170770197	170770296	.	+	.	Name=Days_to_silk;B73v2_pos=6:159294218;1allele=C/G;version=Hapmap2;RS=rs845077777;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	170909633	170909732	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:159437882;1allele=/GATAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	170963047	170963146	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:159463206;1allele=G/A;version=Hapmap2;RS=rs278156957;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	170963098	170963197	.	+	.	Name=Days_to_silk;B73v2_pos=6:159463257;1allele=A/G;version=Hapmap2;RS=rs278156960;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	171079428	171079527	.	+	.	Name=Days_to_silk;B73v2_pos=6:159596942;1allele=T/C;version=Hapmap2;RS=rs846003624;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	171079620	171079719	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:159597134;1allele=A/C;version=Hapmap2;RS=rs829120461;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	171110435	171110534	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:159627946;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171115343	171115442	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:159632854;1allele=G/C;version=Hapmap2;RS=rs278157318;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	171163482	171163581	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:159677608;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171178106	171178205	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:159692232;1allele=G/A;version=Hapmap2;RS=rs130441327;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	171197514	171197613	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:159713415;1allele=T/C;version=Hapmap2;RS=rs811343604;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	171215101	171215200	.	+	.	Name=Days_to_silk;B73v2_pos=6:159731000;1allele=G/A;version=Hapmap2;RS=rs726548133;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	171218423	171218522	.	+	.	Name=Days_to_silk;B73v2_pos=6:159734322;1allele=C/G;version=Hapmap1;RS=rs132361106;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	171219017	171219116	.	+	.	Name=Days_to_silk;B73v2_pos=6:159734916;1allele=C/T;version=Hapmap2;RS=rs822117073;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	171243450	171243549	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:159759350;1allele=C/A;version=Hapmap2;RS=rs848667277;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	171244092	171244191	.	+	.	Name=Days_to_silk;B73v2_pos=6:159759992;1allele=T/C;version=Hapmap1;RS=rs132361117;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	171245611	171245710	.	+	.	Name=Days_to_silk;B73v2_pos=6:159761511;1allele=C/G;version=Hapmap2;RS=rs822784272;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	171297574	171297673	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:159813477;1allele=T/C;version=Hapmap2;RS=rs1063965785;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	171328622	171328721	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:159845071;1allele=T/A;version=Hapmap2;RS=rs278157605;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	171329162	171329261	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:159845611;1allele=/GGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171340082	171340181	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:159856530;1allele=A/T;version=Hapmap2;RS=rs1063154918;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	171491415	171491514	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:160011877;1allele=A/G;version=Hapmap2;RS=rs130441952;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	171615916	171616015	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:160137158;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171641703	171641802	.	+	.	Name=Days_to_silk;B73v2_pos=6:160162946;1allele=C/T;version=Hapmap2;RS=rs838557474;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	171641708	171641807	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:160162951;1allele=A/C;version=Hapmap2;RS=rs820111449;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	171643426	171643525	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:160164669;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171648415	171648514	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:160169658;1allele=A/G;version=Hapmap2;RS=rs130442324;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	171693112	171693211	.	+	.	Name=Nitrate;B73v2_pos=6:160229531;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171696869	171696968	.	+	.	Name=Sucrose;B73v2_pos=6:160233288;1allele=/CACG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171697830	171697929	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:160234249;1allele=T/G;version=Hapmap2;RS=rs130442447;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	171699126	171699225	.	+	.	Name=Days_to_silk;B73v2_pos=6:160235545;1allele=G/A;version=Hapmap1;RS=rs724438773;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	171700080	171700179	.	+	.	Name=Days_to_silk;B73v2_pos=6:160236499;1allele=A/G;version=Hapmap1;RS=rs132362187;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	171700127	171700226	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:160236546;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	171700938	171701037	.	+	.	Name=Days_to_silk;B73v2_pos=6:160237357;1allele=G/T;version=Hapmap2;RS=rs130442474;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	171811408	171811507	.	+	.	Name=Days_to_silk;B73v2_pos=6:160338897;1allele=C/G;version=Hapmap2;RS=rs130442555;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	171828310	171828409	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:160349861;1allele=T/C;version=Hapmap2;RS=rs825993757;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	171828840	171828939	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:160350391;1allele=T/A;version=Hapmap2;RS=rs278158223;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	171897472	171897571	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:160412751;1allele=T/C;version=Hapmap2;RS=rs810933555;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	171921424	171921523	.	+	.	Name=Days_to_silk;B73v2_pos=6:160436703;1allele=-/+;version=Hapmap2;RS=rs130442775;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	171921424	171921523	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:160436703;1allele=-/+;version=Hapmap2;RS=rs130442775;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	171965842	171965941	.	+	.	Name=Height_above_ear;B73v2_pos=6:160477547;1allele=G/A;version=Hapmap2;RS=rs132362569;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	171965842	171965941	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:160477547;1allele=G/A;version=Hapmap2;RS=rs132362569;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	172040075	172040174	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:160538077;1allele=T/A;version=Hapmap2;RS=rs833461003;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	172042958	172043057	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:160540960;1allele=A/G;version=Hapmap2;RS=rs725183140;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	172104478	172104577	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:160604571;1allele=G/C;version=Hapmap2;RS=rs130443138;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	172104706	172104805	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:160604799;1allele=G/C;version=Hapmap2;RS=rs130443140;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	172106098	172106199	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:160606191;1allele=T/C;version=Hapmap2;RS=rs836774942;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	172118253	172118352	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:160618345;1allele=C/T;version=Hapmap2;RS=rs829193475;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	172121462	172121561	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:160621554;1allele=C/T;version=Hapmap2;RS=rs132362766;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	172204035	172204134	.	+	.	Name=Days_to_silk;B73v2_pos=6:160702749;1allele=T/C;version=Hapmap2;RS=rs132362884;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	172218737	172218836	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:160717444;1allele=A/G;version=Hapmap2;RS=rs130443471;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	172218742	172218841	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:160717449;1allele=A/C;version=Hapmap2;RS=rs805597757;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	172245840	172245939	.	+	.	Name=Days_to_silk;B73v2_pos=6:160743198;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	172297684	172297783	.	+	.	Name=Ear_row_number;B73v2_pos=6:160813509;1allele=G/A;version=Hapmap2;RS=rs810521002;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	172483745	172483844	.	+	.	Name=Days_to_silk;B73v2_pos=6:161009548;1allele=A/G;version=Hapmap2;RS=rs725171775;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	172534388	172534487	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:161060193;1allele=T/C;version=Hapmap2;RS=rs130443678;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	172535561	172535660	.	+	.	Name=Days_to_silk;B73v2_pos=6:161061366;1allele=G/T;version=Hapmap2;RS=rs132363187;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	172535944	172536043	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:161061749;1allele=A/G;version=Hapmap2;RS=rs825239211;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	172612635	172612734	.	+	.	Name=Malate;B73v2_pos=6:161137817;1allele=A/G;version=Hapmap2;RS=rs278158852;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	172629603	172629702	.	+	.	Name=Malate;B73v2_pos=6:161154623;1allele=C/T;version=Hapmap2;RS=rs1064551860;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	172690257	172690356	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:161232680;1allele=C/T;version=Hapmap2;RS=rs130443913;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	172907934	172908033	.	+	.	Name=Days_to_silk;B73v2_pos=6:161417492;1allele=G/C;version=Hapmap2;RS=rs823705203;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	172908864	172908963	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:161418422;1allele=T/C;version=Hapmap2;RS=rs809248060;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	172936982	172937081	.	+	.	Name=Ear_row_number;B73v2_pos=6:161446540;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	172943479	172943578	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:161453037;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	172943893	172943992	.	+	.	Name=Days_to_silk;B73v2_pos=6:161453451;1allele=C/T;version=Hapmap2;RS=rs830920094;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	172948267	172948366	.	+	.	Name=Ear_row_number;B73v2_pos=6:161457825;1allele=A/G;version=Hapmap2;RS=rs841380302;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	172951180	172951279	.	+	.	Name=Malate;B73v2_pos=6:161460738;1allele=A/G;version=Hapmap2;RS=rs828954709;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	172951330	172951429	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:161460888;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	172957773	172957872	.	+	.	Name=Days_to_silk;B73v2_pos=6:161467321;1allele=A/C;version=Hapmap2;RS=rs278159093;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	172958664	172958763	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:161468212;1allele=G/A;version=Hapmap2;RS=rs827153372;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	172959055	172959154	.	+	.	Name=Leaf_length;B73v2_pos=6:161468603;1allele=T/G;version=Hapmap2;RS=rs810833977;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	172959520	172959619	.	+	.	Name=Sucrose;B73v2_pos=6:161469068;1allele=G/T;version=Hapmap1;RS=rs132363606;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	173021998	173022097	.	+	.	Name=Nitrate;B73v2_pos=6:161530633;1allele=C/A;version=Hapmap2;RS=rs840119170;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	173046207	173046306	.	+	.	Name=Days_to_silk;B73v2_pos=6:161551224;1allele=G/C;version=Hapmap1;RS=rs132363817;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	173046695	173046794	.	+	.	Name=Malate;B73v2_pos=6:161551712;1allele=C/T;version=Hapmap2;RS=rs130444571;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173051513	173051612	.	+	.	Name=Malate;B73v2_pos=6:161556530;1allele=A/G;version=Hapmap1;RS=rs841546109;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	173190246	173190345	.	+	.	Name=Stalk_strength;B73v2_pos=6:161695142;1allele=G/A;version=Hapmap2;RS=rs832046712;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173212769	173212868	.	+	.	Name=Malate;B73v2_pos=6:161717666;1allele=A/G;version=Hapmap2;RS=rs802952642;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	173302943	173303042	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:161796574;1allele=T/C;version=Hapmap2;RS=rs130445313;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173305498	173305597	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:161799129;1allele=A/G;version=Hapmap2;RS=rs812799479;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	173305513	173305612	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:161799144;1allele=C/T;version=Hapmap2;RS=rs848747485;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173306157	173306256	.	+	.	Name=Chlorophyll_B;B73v2_pos=6:161799788;1allele=G/T;version=Hapmap2;RS=rs811509917;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	173309000	173309099	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:161802631;1allele=A/G;version=Hapmap2;RS=rs130445344;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173310704	173310803	.	+	.	Name=Sucrose;B73v2_pos=6:161804335;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	173331234	173331333	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:161824475;1allele=G/A;version=Hapmap2;RS=rs132364400;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173333911	173334010	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:161827152;1allele=G/A;version=Hapmap2;RS=rs132364432;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173340043	173340142	.	+	.	Name=Malate;B73v2_pos=6:161833452;1allele=T/C;version=Hapmap1;RS=rs132364258;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	173344640	173344739	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:161838049;1allele=G/A;version=Hapmap2;RS=rs837502509;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173375681	173375780	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:161869090;1allele=A/C;version=Hapmap2;RS=rs130445547;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	173406259	173406358	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:161899664;1allele=C/T;version=Hapmap2;RS=rs813842442;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173408148	173408247	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:161901553;1allele=TGCG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	173516783	173516882	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162010907;1allele=C/G;version=Hapmap2;RS=rs802312590;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	173533550	173533649	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:162027674;1allele=C/T;version=Hapmap2;RS=rs130445848;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	173533748	173533847	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:162027872;1allele=C/T;version=Hapmap2;RS=rs1060808787;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	173534539	173534638	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:162028662;1allele=A/G;version=Hapmap2;RS=rs838156702;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173589807	173589906	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:162083945;1allele=G/C;version=Hapmap2;RS=rs802472243;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	173607308	173607407	.	+	.	Name=Malate;B73v2_pos=6:162101698;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	173609243	173609342	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162103633;1allele=G/C;version=Hapmap2;RS=rs816397104;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	173609742	173609841	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:162104132;1allele=G/C;version=Hapmap2;RS=rs278160047;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	173618849	173618948	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162113075;1allele=C/T;version=Hapmap2;RS=rs130445912;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173622331	173622430	.	+	.	Name=Malate;B73v2_pos=6:162116557;1allele=G/C;version=Hapmap2;RS=rs132365482;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	173622343	173622442	.	+	.	Name=Malate;B73v2_pos=6:162116569;1allele=C/G;version=Hapmap1;RS=rs132365483;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	173624896	173624995	.	+	.	Name=Days_to_silk;B73v2_pos=6:162119122;1allele=T/A;version=Hapmap1;RS=rs130445935;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	173625632	173625731	.	+	.	Name=Malate;B73v2_pos=6:162119858;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	173644119	173644218	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162138345;1allele=C/T;version=Hapmap2;RS=rs808364583;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173664054	173664153	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:162158229;1allele=T/A;version=Hapmap2;RS=rs846739629;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	173693529	173693628	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:162187710;1allele=T/C;version=Hapmap2;RS=rs826169638;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	173703067	173703166	.	+	.	Name=Leaf_length;B73v2_pos=6:162197116;1allele=A/C;version=Hapmap2;RS=rs278160228;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	173793758	173793857	.	+	.	Name=Sucrose;B73v2_pos=6:162286950;1allele=A/T;version=Hapmap2;RS=rs824879491;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	173818370	173818469	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:162309946;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	173898934	173899033	.	+	.	Name=Malate;B73v2_pos=6:162382899;1allele=A/C;version=Hapmap2;RS=rs832361589;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	173902910	173903009	.	+	.	Name=Malate;B73v2_pos=6:162386875;1allele=C/T;version=Hapmap2;RS=rs130446343;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173913154	173913253	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:162397119;1allele=C/T;version=Hapmap2;RS=rs810602203;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173954511	173954610	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:162439673;1allele=G/A;version=Hapmap2;RS=rs829644216;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173955650	173955749	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:162440812;1allele=A/G;version=Hapmap2;RS=rs130446400;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173956378	173956477	.	+	.	Name=Malate;B73v2_pos=6:162441540;1allele=T/C;version=Hapmap2;RS=rs845512189;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	173956495	173956594	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:162441657;1allele=C/T;version=Hapmap2;RS=rs818042872;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173956617	173956716	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:162441779;1allele=A/G;version=Hapmap2;RS=rs822156714;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	173957839	173957938	.	+	.	Name=Malate;B73v2_pos=6:162442492;1allele=C/T;version=Hapmap2;RS=rs278160424;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	173960195	173960294	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:162444848;1allele=/AGTGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	173972484	173972583	.	+	.	Name=Ear_row_number;B73v2_pos=6:162477381;1allele=G/A;version=Hapmap2;RS=rs803436536;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	173972998	173973097	.	+	.	Name=Malate;B73v2_pos=6:162477895;1allele=C/T;version=Hapmap2;RS=rs811917204;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	173974748	173974847	.	+	.	Name=Malate;B73v2_pos=6:162479645;1allele=A/C;version=Hapmap2;RS=rs130446444;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	173987861	173987960	.	+	.	Name=Sucrose;B73v2_pos=6:162492758;1allele=A/T;version=Hapmap2;RS=rs822368587;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	174042297	174042396	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:162525558;1allele=T/C;version=Hapmap2;RS=rs813009248;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174072968	174073067	.	+	.	Name=Malate;B73v2_pos=6:162555068;1allele=C/G;version=Hapmap1;RS=rs130446682;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	174080266	174080365	.	+	.	Name=Malate;B73v2_pos=6:162562366;1allele=C/G;version=Hapmap1;RS=rs132366399;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	174081398	174081497	.	+	.	Name=Malate;B73v2_pos=6:162563498;1allele=G/A;version=Hapmap1;RS=rs132366409;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	174092109	174092208	.	+	.	Name=Stalk_strength;B73v2_pos=6:162574207;1allele=G/A;version=Hapmap2;RS=rs130446775;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	174099566	174099665	.	+	.	Name=Height_above_ear;B73v2_pos=6:162581665;1allele=T/C;version=Hapmap2;RS=rs833140194;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174119385	174119484	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:162601821;1allele=T/C;version=Hapmap2;RS=rs815897865;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174123304	174123403	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162605740;1allele=C/G;version=Hapmap2;RS=rs830373734;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	174123304	174123403	.	+	.	Name=Days_to_silk;B73v2_pos=6:162605740;1allele=C/G;version=Hapmap2;RS=rs830373734;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	174123308	174123407	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162605744;1allele=G/C;version=Hapmap1;RS=rs132366778;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	174123310	174123409	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162605746;1allele=T/A;version=Hapmap1;RS=rs132366779;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	174123682	174123781	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162606118;1allele=G/A;version=Hapmap2;RS=rs836909114;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	174124098	174124197	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162606534;1allele=G/T;version=Hapmap2;RS=rs821574757;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	174125164	174125263	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162607600;1allele=C/T;version=Hapmap2;RS=rs132366791;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174126879	174126978	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:162609315;1allele=G/T;version=Hapmap2;RS=rs812948885;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	174165520	174165619	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:162643967;1allele=T/C;version=Hapmap1;RS=rs130446916;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	174165728	174165828	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:162644175;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174167678	174167777	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:162646124;1allele=A/G;version=Hapmap2;RS=rs130446944;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	174193259	174193358	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162670628;1allele=C/T;version=Hapmap2;RS=rs844663110;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174195931	174196030	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:162673300;1allele=T/C;version=Hapmap2;RS=rs132367044;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174200992	174201091	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:162678361;1allele=C/T;version=Hapmap1;RS=rs132367154;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174202363	174202462	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:162679732;1allele=A/C;version=Hapmap2;RS=rs826808578;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	174203003	174203102	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:162680372;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174211083	174211182	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:162688452;1allele=C/G;version=Hapmap2;RS=rs278160935;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	174211202	174211301	.	+	.	Name=Chlorophyll_A;B73v2_pos=6:162688571;1allele=G/C;version=Hapmap2;RS=rs278160940;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	174220390	174220489	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:162697760;1allele=C/T;version=Hapmap1;RS=rs837089157;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174246462	174246561	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:162723186;1allele=T/C;version=Hapmap2;RS=rs278161016;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174420316	174420415	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:162879379;1allele=C/T;version=Hapmap2;RS=rs726070429;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174464791	174464890	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:162919875;1allele=T/A;version=Hapmap1;RS=rs130447430;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174479376	174479475	.	+	.	Name=Height_above_ear;B73v2_pos=6:162934460;1allele=A/G;version=Hapmap2;RS=rs820912525;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	174507862	174507961	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:162966913;1allele=A/T;version=Hapmap2;RS=rs839187456;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	174558596	174558695	.	+	.	Name=Height_above_ear;B73v2_pos=6:163018050;1allele=T/C;version=Hapmap2;RS=rs833795442;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174559568	174559667	.	+	.	Name=Height_above_ear;B73v2_pos=6:163019022;1allele=T/A;version=Hapmap2;RS=rs844608597;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	174635668	174635767	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163091631;1allele=G/T;version=Hapmap2;RS=rs130447852;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	174636554	174636653	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163092517;1allele=C/T;version=Hapmap2;RS=rs804311692;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174636848	174636947	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:163092811;1allele=A/G;version=Hapmap2;RS=rs811577491;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	174637541	174637640	.	+	.	Name=Chlorophyll_B;B73v2_pos=6:163093504;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174637953	174638052	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163093916;1allele=T/C;version=Hapmap2;RS=rs816110646;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174649236	174649335	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163105199;1allele=C/G;version=Hapmap1;RS=rs132368293;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	174651458	174651557	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163107421;1allele=C/T;version=Hapmap2;RS=rs824103501;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174702795	174702894	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:163161994;1allele=G/A;version=Hapmap2;RS=rs833388131;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	174756128	174756227	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163215189;1allele=T/C;version=Hapmap2;RS=rs278161520;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174756174	174756273	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163215235;1allele=C/T;version=Hapmap2;RS=rs1064324233;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174756178	174756277	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163215239;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174756187	174756286	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163215248;1allele=C/A;version=Hapmap2;RS=rs1060819437;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	174758059	174758158	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:163217120;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174758119	174758218	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163217180;1allele=T/C;version=Hapmap2;RS=rs278161535;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174758152	174758251	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163217213;1allele=A/C;version=Hapmap2;RS=rs132368608;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	174768230	174768329	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163227291;1allele=C/T;version=Hapmap2;RS=rs818391830;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174798162	174798261	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163277454;1allele=T/C;version=Hapmap2;RS=rs833337546;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174838103	174838202	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163317401;1allele=C/T;version=Hapmap2;RS=rs847016929;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174871658	174871757	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163350965;1allele=A/T;version=Hapmap2;RS=rs824726051;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	174924151	174924250	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163403457;1allele=A/T;version=Hapmap2;RS=rs846559135;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	174924237	174924336	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:163403543;1allele=A/G;version=Hapmap2;RS=rs841640631;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	174941860	174941959	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:163421166;1allele=/TCGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174942157	174942256	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:163421463;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174949192	174949291	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163428921;1allele=C/T;version=Hapmap2;RS=rs840552159;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174949192	174949291	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163428921;1allele=C/T;version=Hapmap2;RS=rs840552159;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	174951101	174951200	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163430830;1allele=A/G;version=Hapmap2;RS=rs130448243;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	174953438	174953537	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163433167;1allele=T/A;version=Hapmap2;RS=rs130448258;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	174956376	174956475	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163436106;1allele=A/G;version=Hapmap2;RS=rs278161634;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	174977551	174977650	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163461139;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	174977787	174977886	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163461375;1allele=A/C;version=Hapmap2;RS=rs850098933;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	175193142	175193241	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:163671751;1allele=T/C;version=Hapmap2;RS=rs847961098;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175198101	175198200	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:163676710;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175254653	175254752	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163766751;1allele=+/-;version=Hapmap2;RS=rs836284070;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	175303158	175303257	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:163816685;1allele=G/A;version=Hapmap1;RS=rs132369066;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	175306425	175306524	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163819952;1allele=C/G;version=Hapmap1;RS=rs132369151;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175307659	175307758	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163821186;1allele=T/C;version=Hapmap2;RS=rs849633424;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175308696	175308795	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:163822223;1allele=A/T;version=Hapmap2;RS=rs132369168;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	175315247	175315346	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:163828774;1allele=C/A;version=Hapmap2;RS=rs805894460;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	175318997	175319096	.	+	.	Name=Height_above_ear;B73v2_pos=6:163832524;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175319792	175319891	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163833319;1allele=A/C;version=Hapmap2;RS=rs130448585;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	175320266	175320365	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163833793;1allele=G/C;version=Hapmap2;RS=rs130448592;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	175322101	175322200	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:163835628;1allele=A/C;version=Hapmap1;RS=rs132369269;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175324231	175324330	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163837758;1allele=C/T;version=Hapmap2;RS=rs840114589;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175327505	175327604	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163841032;1allele=C/T;version=Hapmap2;RS=rs834271756;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175329152	175329251	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163842679;1allele=T/A;version=Hapmap2;RS=rs844058586;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175339805	175339904	.	+	.	Name=Height_above_ear;B73v2_pos=6:163853332;1allele=G/A;version=Hapmap2;RS=rs806849196;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	175340412	175340511	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163853939;1allele=C/A;version=Hapmap1;RS=rs132369345;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175341842	175341941	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163855369;1allele=G/T;version=Hapmap2;RS=rs278162084;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	175355564	175355663	.	+	.	Name=Protein;B73v2_pos=6:163869025;1allele=T/A;version=Hapmap2;RS=rs278162134;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	175356662	175356761	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163870123;1allele=G/A;version=Hapmap1;RS=rs132369388;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	175410357	175410456	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163922539;1allele=C/A;version=Hapmap2;RS=rs278162306;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	175410775	175410874	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:163922957;1allele=G/A;version=Hapmap2;RS=rs278162308;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175418782	175418881	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:163929943;1allele=A/C;version=Hapmap2;RS=rs808605360;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	175421358	175421457	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163932519;1allele=T/C;version=Hapmap1;RS=rs132369539;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175421384	175421483	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163932545;1allele=ATT/;version=Hapmap1;RS=rs810515411;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175421418	175421517	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163932579;1allele=G/C;version=Hapmap1;RS=rs132369543;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	175439431	175439530	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163950069;1allele=C/T;version=Hapmap1;RS=rs132369598;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175439431	175439530	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163950069;1allele=C/T;version=Hapmap2;RS=rs132369598;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175439486	175439585	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163950124;1allele=A/G;version=Hapmap1;RS=rs132369601;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175439526	175439625	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:163950164;1allele=T/G;version=Hapmap2;RS=rs132369603;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	175481756	175481855	.	+	.	Name=Total_amino_acids;B73v2_pos=6:164000997;1allele=G/A;version=Hapmap2;RS=rs132369679;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	175508655	175508754	.	+	.	Name=Total_amino_acids;B73v2_pos=6:163990598;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175508673	175508772	.	+	.	Name=Total_amino_acids;B73v2_pos=6:163990580;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175510320	175510419	.	+	.	Name=Total_amino_acids;B73v2_pos=6:163988933;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175512445	175512544	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:163986808;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175515420	175515519	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:163983833;1allele=C/A;version=Hapmap2;RS=rs278162411;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	175531181	175531280	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:163968071;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175548870	175548969	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=4:179950088;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175572816	175572915	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:164096385;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175572823	175572922	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:164096392;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175573754	175573853	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164097323;1allele=C/T;version=Hapmap2;RS=rs278162495;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175612703	175612802	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164136696;1allele=G/A;version=Hapmap2;RS=rs278162527;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175613133	175613232	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164137126;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175617108	175617207	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:164141101;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175619492	175619591	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:164143485;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175660179	175660278	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:164184866;1allele=C/T;version=Hapmap2;RS=rs278162731;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175662097	175662196	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164186784;1allele=C/G;version=Hapmap2;RS=rs1062991232;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	175663683	175663782	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:164188370;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175664722	175664816	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164189405;1allele=G/T;version=Hapmap1;RS=rs132369922;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	175664722	175664816	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164189405;1allele=G/T;version=Hapmap1;RS=rs132369922;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	175756498	175756597	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164279466;1allele=C/A;version=Hapmap1;RS=rs132369972;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	175760218	175760317	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:164283186;1allele=C/T;version=Hapmap1;RS=rs132370017;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175763663	175763751	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164307588;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175763663	175763738	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164307575;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175777424	175777523	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164321142;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175820578	175820677	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164364256;1allele=C/G;version=Hapmap1;RS=rs132370155;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	175820889	175820988	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164364567;1allele=T/C;version=Hapmap2;RS=rs823388839;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175820889	175820988	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164364567;1allele=T/C;version=Hapmap2;RS=rs823388839;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175823192	175823291	.	+	.	Name=Leaf_width;B73v2_pos=6:164366870;1allele=G/C;version=Hapmap2;RS=rs826201094;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	175823733	175823832	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:164367411;1allele=C/T;version=Hapmap2;RS=rs278162955;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175823733	175823832	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:164367411;1allele=C/T;version=Hapmap2;RS=rs278162955;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175824155	175824254	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164367833;1allele=A/G;version=Hapmap2;RS=rs834204877;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175842803	175842902	.	+	.	Name=Total_amino_acids;B73v2_pos=6:164386481;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175909081	175909180	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164452819;1allele=C/A;version=Hapmap2;RS=rs841404681;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	175938104	175938203	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164481844;1allele=C/G;version=Hapmap1;RS=rs130449324;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	175956066	175956165	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164499807;1allele=A/G;version=Hapmap2;RS=rs727474287;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	175956186	175956285	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164499927;1allele=T/C;version=Hapmap2;RS=rs724637691;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	175963648	175963747	.	+	.	Name=Days_to_silk;B73v2_pos=6:164507403;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	175976622	175976721	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164520377;1allele=G/A;version=Hapmap2;RS=rs132370653;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	175976623	175976722	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164520378;1allele=C/G;version=Hapmap2;RS=rs132370654;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176009934	176010033	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164553695;1allele=T/G;version=Hapmap1;RS=rs808329461;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	176010245	176010344	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:164554006;1allele=A/C;version=Hapmap2;RS=rs132370724;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	176012524	176012623	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164556285;1allele=A/T;version=Hapmap1;RS=rs132370745;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	176012546	176012645	.	+	.	Name=Total_amino_acids;B73v2_pos=6:164556307;1allele=-/+;version=Hapmap2;RS=rs827964713;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	176012565	176012664	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164556326;1allele=G/C;version=Hapmap2;RS=rs132370748;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	176089181	176089280	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:164650038;1allele=T/G;version=Hapmap2;RS=rs803960475;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	176139091	176139190	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:164677436;1allele=A/G;version=Hapmap2;RS=rs130449808;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176141918	176142017	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164680263;1allele=A/G;version=Hapmap2;RS=rs130449823;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176142280	176142379	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164680625;1allele=A/G;version=Hapmap2;RS=rs130449828;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176142791	176142890	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164681136;1allele=T/G;version=Hapmap2;RS=rs130449835;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	176152192	176152291	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164690537;1allele=G/T;version=Hapmap1;RS=rs132371287;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	176152946	176153045	.	+	.	Name=Leaf_width;B73v2_pos=6:164691291;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	176212386	176212485	.	+	.	Name=Nodes_per_plant;B73v2_pos=6:164749427;1allele=T/C;version=Hapmap2;RS=rs808627521;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	176249592	176249691	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:164786636;1allele=G/A;version=Hapmap2;RS=rs807059039;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176251116	176251215	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=6:164788160;1allele=A/G;version=Hapmap2;RS=rs278163797;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176252960	176253059	.	+	.	Name=Leaf_width;B73v2_pos=6:164790001;1allele=A/G;version=Hapmap2;RS=rs130450030;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	176257122	176257221	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164794163;1allele=G/A;version=Hapmap2;RS=rs132371482;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	176259918	176260017	.	+	.	Name=Ear_height;B73v2_pos=6:164796959;1allele=G/A;version=Hapmap2;RS=rs132371513;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176260483	176260582	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:164797524;1allele=C/T;version=Hapmap2;RS=rs808009093;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176261473	176261572	.	+	.	Name=Total_amino_acids;B73v2_pos=6:164798514;1allele=G/A;version=Hapmap2;RS=rs132371549;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176261503	176261602	.	+	.	Name=Total_amino_acids;B73v2_pos=6:164798544;1allele=G/T;version=Hapmap2;RS=rs836218912;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	176266458	176266557	.	+	.	Name=Days_to_silk;B73v2_pos=6:164803499;1allele=C/T;version=Hapmap1;RS=rs130450095;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176266458	176266557	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:164803499;1allele=C/T;version=Hapmap1;RS=rs130450095;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176267677	176267776	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:164804718;1allele=T/G;version=Hapmap2;RS=rs130450102;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	176267740	176267839	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:164804781;1allele=G/C;version=Hapmap1;RS=rs132371719;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	176267740	176267839	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:164804781;1allele=G/C;version=Hapmap1;RS=rs132371719;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	176328219	176328318	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:164854082;1allele=/CACAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	176329503	176329602	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:164855366;1allele=/AGTTAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	176335024	176335123	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:164867350;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	176348880	176348979	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:164901677;1allele=C/T;version=Hapmap2;RS=rs822749674;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176445933	176446032	.	+	.	Name=Days_to_silk;B73v2_pos=6:164983130;1allele=A/G;version=Hapmap1;RS=rs132372115;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176457869	176457968	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:164995066;1allele=C/A;version=Hapmap2;RS=rs278164078;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	176458366	176458465	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:164995563;1allele=G/A;version=Hapmap2;RS=rs825101441;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176459008	176459107	.	+	.	Name=Total_amino_acids;B73v2_pos=6:164996205;1allele=A/G;version=Hapmap2;RS=rs832783742;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176475321	176475420	.	+	.	Name=Days_to_silk;B73v2_pos=6:165012073;1allele=C/A;version=Hapmap2;RS=rs130450395;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	176475321	176475420	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:165012073;1allele=C/A;version=Hapmap2;RS=rs130450395;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	176477586	176477685	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:165014338;1allele=T/C;version=Hapmap2;RS=rs132372148;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	176493771	176493870	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:165030527;1allele=C/T;version=Hapmap2;RS=rs850108093;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176546591	176546690	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:165085320;1allele=A/T;version=Hapmap2;RS=rs130450568;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	176558064	176558163	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:165096793;1allele=A/G;version=Hapmap2;RS=rs278164323;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176569586	176569685	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:165108315;1allele=T/C;version=Hapmap2;RS=rs808181181;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	176617589	176617688	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:165131188;1allele=T/A;version=Hapmap2;RS=rs278164452;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	176620229	176620328	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:165133828;1allele=C/T;version=Hapmap2;RS=rs278164464;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176628972	176629071	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:165142571;1allele=A/G;version=Hapmap2;RS=rs824867355;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176645445	176645544	.	+	.	Name=Southern_leaf_blight;B73v2_pos=6:165159044;1allele=G/A;version=Hapmap2;RS=rs130450796;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176649204	176649303	.	+	.	Name=Total_amino_acids;B73v2_pos=6:165162803;1allele=T/A;version=Hapmap2;RS=rs831158681;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	176703312	176703411	.	+	.	Name=Days_to_silk;B73v2_pos=6:165240078;1allele=/GCGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	176703825	176703924	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:165240591;1allele=/GACCAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	176704105	176704204	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:165240871;1allele=C/G;version=Hapmap2;RS=rs132372681;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	176712436	176712535	.	+	.	Name=Total_amino_acids;B73v2_pos=6:165249202;1allele=C/T;version=Hapmap2;RS=rs130450894;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176712445	176712544	.	+	.	Name=Total_amino_acids;B73v2_pos=6:165249211;1allele=A/C;version=Hapmap2;RS=rs132372810;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176746015	176746114	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:165281225;1allele=A/G;version=Hapmap2;RS=rs807641486;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176748322	176748421	.	+	.	Name=Height_above_ear;B73v2_pos=6:165283532;1allele=T/C;version=Hapmap2;RS=rs813442365;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	176805648	176805747	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:165340243;1allele=T/A;version=Hapmap2;RS=rs278165245;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	176806417	176806516	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=6:165341012;1allele=T/C;version=Hapmap2;RS=rs1063335303;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	176813316	176813415	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:165347911;1allele=T/G;version=Hapmap1;RS=rs132372937;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	176942932	176943031	.	+	.	Name=Leaf_width;B73v2_pos=6:165487374;1allele=T/A;version=Hapmap1;RS=rs132373246;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	176944109	176944208	.	+	.	Name=Leaf_width;B73v2_pos=6:165488551;1allele=C/T;version=Hapmap1;RS=rs132373195;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176946124	176946223	.	+	.	Name=Leaf_width;B73v2_pos=6:165490566;1allele=G/A;version=Hapmap2;RS=rs278165526;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	176946896	176946995	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:165491338;1allele=A/G;version=Hapmap2;RS=rs278165552;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	176949187	176949286	.	+	.	Name=Malate;B73v2_pos=6:165493629;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177033862	177033961	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:165564767;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177038188	177038287	.	+	.	Name=Leaf_width;B73v2_pos=6:165569093;1allele=C/T;version=Hapmap2;RS=rs132373386;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	177203874	177203973	.	+	.	Name=Ear_row_number;B73v2_pos=6:165763786;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177274224	177274323	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:165801964;1allele=T/C;version=Hapmap1;RS=rs132374004;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	177274933	177275032	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:165802673;1allele=G/A;version=Hapmap2;RS=rs847040223;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	177276974	177277073	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:165804714;1allele=C/A;version=Hapmap2;RS=rs836705764;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	177278363	177278462	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:165806103;1allele=T/C;version=Hapmap1;RS=rs132374068;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	177279569	177279668	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:165807309;1allele=C/G;version=Hapmap1;RS=rs130451696;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	177280922	177281021	.	+	.	Name=Leaf_width;B73v2_pos=6:165808662;1allele=G/T;version=Hapmap1;RS=rs132374107;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	177428721	177428820	.	+	.	Name=Ear_row_number;B73v2_pos=6:165943235;1allele=T/C;version=Hapmap2;RS=rs130451762;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	177430274	177430373	.	+	.	Name=Ear_row_number;B73v2_pos=6:165944788;1allele=T/C;version=Hapmap2;RS=rs130451777;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	177447727	177447826	.	+	.	Name=Days_to_silk;B73v2_pos=6:165962241;1allele=A/G;version=Hapmap1;RS=rs132374352;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	177496059	177496158	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166007564;1allele=T/A;version=Hapmap2;RS=rs824680057;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	177525703	177525802	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166036723;1allele=C/T;version=Hapmap2;RS=rs831021967;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	177542901	177543000	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:166053922;1allele=T/G;version=Hapmap2;RS=rs132374586;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	177556993	177557092	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:166067772;1allele=C/T;version=Hapmap1;RS=rs132374625;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	177556993	177557092	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:166067772;1allele=C/T;version=Hapmap1;RS=rs132374625;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	177556993	177557092	.	+	.	Name=Ear_height;B73v2_pos=6:166067772;1allele=C/T;version=Hapmap1;RS=rs132374625;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	177557309	177557408	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:166068088;1allele=/CATC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177565891	177565990	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:166076614;1allele=A/G;version=Hapmap2;RS=rs813622800;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	177566927	177567026	.	+	.	Name=Ear_row_number;B73v2_pos=6:166077650;1allele=T/C;version=Hapmap2;RS=rs132374761;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	177572383	177572482	.	+	.	Name=Height_above_ear;B73v2_pos=6:166083106;1allele=G/A;version=Hapmap2;RS=rs130452023;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	177587792	177587891	.	+	.	Name=Height_above_ear;B73v2_pos=6:166098514;1allele=C/A;version=Hapmap2;RS=rs835716839;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	177641504	177641603	.	+	.	Name=Ear_row_number;B73v2_pos=6:166148323;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177671331	177671430	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166178900;1allele=C/G;version=Hapmap2;RS=rs130452196;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	177672430	177672529	.	+	.	Name=Ear_row_number;B73v2_pos=6:166179999;1allele=A/G;version=Hapmap2;RS=rs811424100;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	177674286	177674385	.	+	.	Name=Ear_row_number;B73v2_pos=6:166181855;1allele=A/G;version=Hapmap2;RS=rs130452214;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	177674795	177674894	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166182364;1allele=C/T;version=Hapmap2;RS=rs132375021;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	177675193	177675292	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:166182762;1allele=G/T;version=Hapmap1;RS=rs132375038;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	177678644	177678743	.	+	.	Name=Days_to_silk;B73v2_pos=6:166186213;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177679074	177679173	.	+	.	Name=Days_to_silk;B73v2_pos=6:166186643;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177712659	177712758	.	+	.	Name=Ear_row_number;B73v2_pos=6:166237689;1allele=A/C;version=Hapmap2;RS=rs831333539;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	177713329	177713428	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:166238359;1allele=/TTTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	177983885	177983984	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:166519461;1allele=C/T;version=Hapmap2;RS=rs278166800;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	178053129	178053228	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166587988;1allele=C/A;version=Hapmap1;RS=rs132375299;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	178093558	178093657	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166628585;1allele=A/T;version=Hapmap2;RS=rs725362569;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	178108354	178108453	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166636939;1allele=T/C;version=Hapmap2;RS=rs132375426;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	178111083	178111182	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166639669;1allele=G/A;version=Hapmap2;RS=rs815676312;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	178137374	178137473	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:166665440;1allele=G/A;version=Hapmap2;RS=rs808994149;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	178137643	178137742	.	+	.	Name=Days_to_silk;B73v2_pos=6:166665709;1allele=G/A;version=Hapmap2;RS=rs278166935;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	178148141	178148240	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:166676207;1allele=C/G;version=Hapmap2;RS=rs278166988;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	178252982	178253081	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=6:166781506;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	178253184	178253283	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:166781708;1allele=G/A;version=Hapmap2;RS=rs835710667;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	178281002	178281101	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=6:166811246;1allele=A/C;version=Hapmap1;RS=rs814582270;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	178284905	178285004	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:166815149;1allele=C/T;version=Hapmap1;RS=rs132375711;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	178284905	178285004	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:166815149;1allele=C/T;version=Hapmap1;RS=rs132375711;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	178292512	178292611	.	+	.	Name=Height_above_ear;B73v2_pos=6:166822756;1allele=A/T;version=Hapmap2;RS=rs802948290;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	178293669	178293768	.	+	.	Name=Height_above_ear;B73v2_pos=6:166823913;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	178294016	178294115	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:166824260;1allele=C/A;version=Hapmap2;RS=rs278167267;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	178299535	178299634	.	+	.	Name=Ear_row_number;B73v2_pos=6:166829775;1allele=G/T;version=Hapmap2;RS=rs130452868;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	178299910	178300009	.	+	.	Name=Ear_row_number;B73v2_pos=6:166830150;1allele=G/A;version=Hapmap2;RS=rs802049655;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	178331719	178331818	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:166864104;1allele=G/A;version=Hapmap2;RS=rs278167311;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	178334401	178334500	.	+	.	Name=Starch;B73v2_pos=6:166866785;1allele=C/T;version=Hapmap2;RS=rs842891697;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	178357514	178357613	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:166890095;1allele=G/A;version=Hapmap2;RS=rs130452948;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	178366484	178366583	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:166899064;1allele=T/C;version=Hapmap2;RS=rs132375922;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	178434673	178434772	.	+	.	Name=Days_to_silk;B73v2_pos=6:166966693;1allele=A/G;version=Hapmap2;RS=rs278167581;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	178438295	178438394	.	+	.	Name=Height_above_ear;B73v2_pos=6:166970315;1allele=A/C;version=Hapmap2;RS=rs1060962801;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	178499301	178499400	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:167033734;1allele=C/G;version=Hapmap2;RS=rs278167638;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	178767092	178767191	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:167302680;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	178892237	178892336	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:167430425;1allele=A/T;version=Hapmap2;RS=rs130453958;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	178892237	178892336	.	+	.	Name=Days_to_silk;B73v2_pos=6:167430425;1allele=A/T;version=Hapmap2;RS=rs130453958;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	178932797	178932896	.	+	.	Name=Days_to_silk;B73v2_pos=6:167470707;1allele=A/C;version=Hapmap2;RS=rs846169919;2ref_allele=A;3alt_allele=C
chr6	Wallace_2014	SNP	178935471	178935570	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:167473381;1allele=G/C;version=Hapmap2;RS=rs809424662;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	179095071	179095170	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:167573524;1allele=T/A;version=Hapmap2;RS=rs816116110;2ref_allele=T;3alt_allele=A
chr6	Wallace_2014	SNP	179096357	179096456	.	+	.	Name=Days_to_silk;B73v2_pos=6:167574810;1allele=C/A;version=Hapmap2;RS=rs837988977;2ref_allele=C;3alt_allele=A
chr6	Wallace_2014	SNP	179098791	179098890	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577244;1allele=G/T;version=Hapmap2;RS=rs278168740;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	179098859	179098958	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577312;1allele=G/A;version=Hapmap2;RS=rs835747997;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	179098960	179099059	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577413;1allele=A/G;version=Hapmap2;RS=rs837726476;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	179098989	179099088	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577442;1allele=T/C;version=Hapmap2;RS=rs847976866;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179098989	179099088	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:167577442;1allele=T/C;version=Hapmap2;RS=rs847976866;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179099010	179099109	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577463;1allele=A/T;version=Hapmap2;RS=rs847150366;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	179099114	179099213	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577567;1allele=C/T;version=Hapmap2;RS=rs821029189;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	179099122	179099221	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:167577575;1allele=A/G;version=Hapmap2;RS=rs809780928;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	179099216	179099315	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577669;1allele=G/C;version=Hapmap2;RS=rs130456053;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	179099272	179099371	.	+	.	Name=Height_above_ear;B73v2_pos=6:167577725;1allele=C/G;version=Hapmap2;RS=rs727020670;2ref_allele=C;3alt_allele=G
chr6	Wallace_2014	SNP	179099411	179099510	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:167577864;1allele=A/G;version=Hapmap2;RS=rs829659047;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	179102559	179102658	.	+	.	Name=Stalk_strength;B73v2_pos=6:167604647;1allele=/GACG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	179107596	179107695	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:167609684;1allele=G/A;version=Hapmap2;RS=rs278168804;2ref_allele=G;3alt_allele=C
chr6	Wallace_2014	SNP	179192475	179192574	.	+	.	Name=Days_to_silk;B73v2_pos=6:167601650;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	179193698	179193797	.	+	.	Name=Days_to_silk;B73v2_pos=6:167600427;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	179300967	179301066	.	+	.	Name=Days_to_silk;B73v2_pos=6:167768966;1allele=C/T;version=Hapmap2;RS=rs1061051340;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179333355	179333454	.	+	.	Name=Days_to_silk;B73v2_pos=6:167799375;1allele=A/G;version=Hapmap1;RS=rs130455950;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	179357688	179357787	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=6:167823713;1allele=T/C;version=Hapmap1;RS=rs130455866;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	179358471	179358570	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:167824496;1allele=T/C;version=Hapmap2;RS=rs803836588;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179408748	179408847	.	+	.	Name=Leaf_width;B73v2_pos=6:167845884;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	179506489	179506588	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:167960472;1allele=A/G;version=Hapmap1;RS=rs132377215;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179506489	179506588	.	+	.	Name=Ear_height;B73v2_pos=6:167960472;1allele=A/G;version=Hapmap1;RS=rs132377215;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179506489	179506588	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:167960472;1allele=A/G;version=Hapmap1;RS=rs132377215;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179506519	179506618	.	+	.	Name=Leaf_width;B73v2_pos=6:167960502;1allele=T/C;version=Hapmap1;RS=rs132377214;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	179529905	179530004	.	+	.	Name=Stalk_strength;B73v2_pos=6:167983888;1allele=A/G;version=Hapmap2;RS=rs130455678;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	179568242	179568341	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:168072019;1allele=G/A;version=Hapmap1;RS=rs130455501;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	179569999	179570098	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:168073776;1allele=G/A;version=Hapmap1;RS=rs130455482;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	179647548	179647647	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:168099980;1allele=T/C;version=Hapmap2;RS=rs130455584;2ref_allele=T;3alt_allele=C
chr6	Wallace_2014	SNP	179919287	179919386	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:168358939;1allele=G/A;version=Hapmap2;RS=rs726154787;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	179923233	179923332	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:168362887;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	179923890	179923989	.	+	.	Name=Days_to_anthesis;B73v2_pos=6:168363544;1allele=T/G;version=Hapmap2;RS=rs804107951;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	179923890	179923989	.	+	.	Name=Days_to_silk;B73v2_pos=6:168363544;1allele=T/G;version=Hapmap2;RS=rs804107951;2ref_allele=T;3alt_allele=G
chr6	Wallace_2014	SNP	179933790	179933889	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:168372893;1allele=T/G;version=Hapmap2;RS=rs278170345;2ref_allele=G;3alt_allele=T
chr6	Wallace_2014	SNP	180098808	180098907	.	+	.	Name=Ear_row_number;B73v2_pos=6:168546899;1allele=A/G;version=Hapmap2;RS=rs1061355776;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	180101352	180101451	.	+	.	Name=Nodes_to_ear;B73v2_pos=6:168549443;1allele=C/T;version=Hapmap2;RS=rs833650086;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	180238043	180238142	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=6:168686878;1allele=A/G;version=Hapmap2;RS=rs840055771;2ref_allele=A;3alt_allele=T
chr6	Wallace_2014	SNP	180477158	180477257	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:168915729;1allele=C/T;version=Hapmap2;RS=rs811784158;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	180492362	180492461	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:168930933;1allele=A/G;version=Hapmap2;RS=rs1063803648;2ref_allele=A;3alt_allele=G
chr6	Wallace_2014	SNP	180529401	180529500	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:168967973;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	180550991	180551090	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:169034969;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr6	Wallace_2014	SNP	180617307	180617406	.	+	.	Name=Tassel_branch_number;B73v2_pos=6:169052947;1allele=G/A;version=Hapmap2;RS=rs830861550;2ref_allele=G;3alt_allele=A
chr6	Wallace_2014	SNP	180643930	180644029	.	+	.	Name=Days_to_silk;B73v2_pos=6:169079722;1allele=T/C;version=Hapmap2;RS=rs278171723;2ref_allele=C;3alt_allele=T
chr6	Wallace_2014	SNP	180650719	180650818	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:169087151;1allele=C/T;version=Hapmap2;RS=rs130454366;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	662182	662281	.	+	.	Name=NA;B73v2_pos=NA;1allele=NA;version=NA;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	729584	729683	.	+	.	Name=Plant_height;B73v2_pos=7:34065;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	729584	729683	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:34065;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	732319	732418	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:31330;1allele=/TAGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	732319	732418	.	+	.	Name=Ear_height;B73v2_pos=7:31330;1allele=/TAGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	796107	796206	.	+	.	Name=Plant_height;B73v2_pos=7:1049250;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	796107	796206	.	+	.	Name=Ear_height;B73v2_pos=7:1049250;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	806072	806171	.	+	.	Name=Stalk_strength;B73v2_pos=7:1039285;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	835354	835453	.	+	.	Name=Ear_height;B73v2_pos=7:997981;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	837996	838095	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:995339;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	838299	838398	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:995036;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	869168	869267	.	+	.	Name=Sucrose;B73v2_pos=7:964169;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	869837	869936	.	+	.	Name=Plant_height;B73v2_pos=7:963500;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	870001	870100	.	+	.	Name=Plant_height;B73v2_pos=7:963336;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	870001	870100	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:963336;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	877259	877358	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:956078;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	879577	879676	.	+	.	Name=Ear_height;B73v2_pos=7:953760;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	879589	879688	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:953748;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	880954	881053	.	+	.	Name=Sucrose;B73v2_pos=7:952383;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	906322	906421	.	+	.	Name=Ear_height;B73v2_pos=7:927006;1allele=T/C;version=Hapmap1;RS=rs836768453;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	913428	913527	.	+	.	Name=Ear_height;B73v2_pos=7:919900;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	924760	924859	.	+	.	Name=Stalk_strength;B73v2_pos=7:908567;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	999508	999607	.	+	.	Name=Tassel_length;B73v2_pos=7:831566;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1022360	1022459	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:808544;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1024678	1024777	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:806226;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1027534	1027633	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:803370;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1057201	1057300	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:774670;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1058808	1058907	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:773063;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1100084	1100183	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:732373;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1101127	1101226	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:731330;1allele=C/T;version=Hapmap1;RS=rs844868285;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1101127	1101226	.	+	.	Name=Plant_height;B73v2_pos=7:731330;1allele=C/T;version=Hapmap1;RS=rs844868285;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1102830	1102929	.	+	.	Name=Plant_height;B73v2_pos=7:729763;1allele=C/T;version=Hapmap2;RS=rs848641520;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1112886	1112985	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:719707;1allele=A/G;version=Hapmap2;RS=rs831216467;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	1113465	1113564	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:719128;1allele=CG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1113535	1113634	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:719058;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1113535	1113634	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:719058;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1113535	1113634	.	+	.	Name=Plant_height;B73v2_pos=7:719058;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1174278	1174377	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1061257;1allele=C/T;version=Hapmap2;RS=rs850031933;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1174392	1174491	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1061371;1allele=G/A;version=Hapmap2;RS=rs835953044;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	1175401	1175500	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1062380;1allele=T/C;version=Hapmap2;RS=rs806713244;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	1177843	1177942	.	+	.	Name=Ear_height;B73v2_pos=7:1064822;1allele=A/T;version=Hapmap2;RS=rs808485672;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	1178606	1178705	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1065585;1allele=G/A;version=Hapmap2;RS=rs847188650;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	1221388	1221487	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1115160;1allele=A/T;version=Hapmap2;RS=rs846990811;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	1226060	1226159	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:1119833;1allele=G/T;version=Hapmap2;RS=rs278173036;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	1226060	1226159	.	+	.	Name=Ear_height;B73v2_pos=7:1119833;1allele=G/T;version=Hapmap2;RS=rs278173036;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	1226970	1227069	.	+	.	Name=Ear_height;B73v2_pos=7:1120743;1allele=T/A;version=Hapmap1;RS=rs131590986;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	1250991	1251090	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:1144765;1allele=T/A;version=Hapmap2;RS=rs835674047;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	1255903	1256002	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:1149677;1allele=G/A;version=Hapmap2;RS=rs1060837454;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	1298035	1298134	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1191809;1allele=C/T;version=Hapmap2;RS=rs817110828;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1373101	1373200	.	+	.	Name=Ear_height;B73v2_pos=7:1268070;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1375760	1375859	.	+	.	Name=Tassel_length;B73v2_pos=7:1270729;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1392203	1392302	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1287135;1allele=C/T;version=Hapmap2;RS=rs827068837;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1403290	1403389	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1298222;1allele=C/T;version=Hapmap2;RS=rs840229242;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1404727	1404826	.	+	.	Name=Sucrose;B73v2_pos=7:1299659;1allele=G/C;version=Hapmap2;RS=rs840550077;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	1409049	1409148	.	+	.	Name=Ear_height;B73v2_pos=7:1303981;1allele=G/A;version=Hapmap2;RS=rs130458190;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	1409403	1409502	.	+	.	Name=Ear_height;B73v2_pos=7:1304335;1allele=A/G;version=Hapmap2;RS=rs833529237;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	1554371	1554470	.	+	.	Name=Tassel_length;B73v2_pos=7:1450297;1allele=T/C;version=Hapmap2;RS=rs130458392;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1556096	1556195	.	+	.	Name=Tassel_length;B73v2_pos=7:1452022;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1619143	1619242	.	+	.	Name=Tassel_length;B73v2_pos=7:1515125;1allele=G/A;version=Hapmap2;RS=rs1060693736;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	1619324	1619423	.	+	.	Name=Tassel_length;B73v2_pos=7:1515306;1allele=C/T;version=Hapmap2;RS=rs1061298864;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	1630712	1630811	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1526695;1allele=A/G;version=Hapmap2;RS=rs832270268;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	1665890	1665989	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1561656;1allele=G/A;version=Hapmap2;RS=rs278174067;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	1814876	1814975	.	+	.	Name=Tassel_length;B73v2_pos=7:1710081;1allele=T/C;version=Hapmap2;RS=rs1063828569;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	1814877	1814976	.	+	.	Name=Tassel_length;B73v2_pos=7:1710082;1allele=G/T;version=Hapmap2;RS=rs1060918823;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	1815168	1815267	.	+	.	Name=Tassel_length;B73v2_pos=7:1710373;1allele=T/A;version=Hapmap2;RS=rs842201387;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	1828161	1828260	.	+	.	Name=Tassel_length;B73v2_pos=7:1744898;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1828683	1828779	.	+	.	Name=Tassel_length;B73v2_pos=7:1745420;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1860648	1860747	.	+	.	Name=Tassel_length;B73v2_pos=7:1757186;1allele=A/C;version=Hapmap2;RS=rs1064561479;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	1880259	1880358	.	+	.	Name=Tassel_length;B73v2_pos=7:1787388;1allele=G/A;version=Hapmap2;RS=rs278174230;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	1880294	1880393	.	+	.	Name=Tassel_length;B73v2_pos=7:1787423;1allele=G/A;version=Hapmap2;RS=rs845647638;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	1880430	1880529	.	+	.	Name=Tassel_length;B73v2_pos=7:1787559;1allele=A/G;version=Hapmap1;RS=rs131591919;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	1884288	1884387	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1791417;1allele=A/T;version=Hapmap2;RS=rs801828286;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	1936923	1937022	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1820281;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1961366	1961465	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:1866367;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	1970690	1970789	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:1875693;1allele=A/T;version=Hapmap2;RS=rs815703165;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	1970778	1970877	.	+	.	Name=Leaf_width;B73v2_pos=7:1875781;1allele=G/T;version=Hapmap2;RS=rs1063746701;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	2016159	2016258	.	+	.	Name=Leaf_width;B73v2_pos=7:1921171;1allele=/GCGTCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	2040411	2040510	.	+	.	Name=Leaf_width;B73v2_pos=7:1945424;1allele=G/A;version=Hapmap2;RS=rs833865526;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	2043765	2043864	.	+	.	Name=Tassel_length;B73v2_pos=7:1948778;1allele=G/A;version=Hapmap2;RS=rs814261276;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	2043768	2043867	.	+	.	Name=Tassel_length;B73v2_pos=7:1948781;1allele=T/A;version=Hapmap2;RS=rs845339275;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	2048329	2048428	.	+	.	Name=Tassel_length;B73v2_pos=7:1953342;1allele=T/C;version=Hapmap2;RS=rs836034376;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2050878	2050977	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:1955884;1allele=C/T;version=Hapmap2;RS=rs131592212;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2071829	2071928	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:1976838;1allele=A/T;version=Hapmap2;RS=rs848473353;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	2075724	2075823	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:1980733;1allele=C/T;version=Hapmap2;RS=rs278174574;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2120846	2120945	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:2026629;1allele=G/A;version=Hapmap2;RS=rs724556583;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	2127501	2127600	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:2033284;1allele=T/C;version=Hapmap2;RS=rs130459304;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	2216529	2216628	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:2135480;1allele=G/A;version=Hapmap2;RS=rs836271600;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	2238722	2238821	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:2157673;1allele=A/T;version=Hapmap2;RS=rs725095428;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	2352596	2352695	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:2301487;1allele=C/T;version=Hapmap2;RS=rs847149426;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2352898	2352997	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:2301789;1allele=A/G;version=Hapmap2;RS=rs843586012;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	2364288	2364387	.	+	.	Name=Leaf_width;B73v2_pos=7:2312301;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	2527608	2527707	.	+	.	Name=Tassel_length;B73v2_pos=7:2470581;1allele=C/T;version=Hapmap2;RS=rs833650639;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	2664545	2664644	.	+	.	Name=Leaf_width;B73v2_pos=7:2634930;1allele=C/T;version=Hapmap2;RS=rs849379694;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2679805	2679904	.	+	.	Name=Leaf_width;B73v2_pos=7:2620510;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	2713999	2714098	.	+	.	Name=Leaf_width;B73v2_pos=7:2716012;1allele=T/C;version=Hapmap2;RS=rs1063908395;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2910193	2910292	.	+	.	Name=Tassel_length;B73v2_pos=7:2841001;1allele=A/G;version=Hapmap2;RS=rs837449603;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	2942189	2942288	.	+	.	Name=Leaf_width;B73v2_pos=7:2872997;1allele=G/A;version=Hapmap2;RS=rs130460765;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	2942598	2942697	.	+	.	Name=Tassel_length;B73v2_pos=7:2873406;1allele=T/C;version=Hapmap2;RS=rs130460775;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2942829	2942928	.	+	.	Name=Tassel_length;B73v2_pos=7:2873637;1allele=T/C;version=Hapmap2;RS=rs278176107;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	2943074	2943173	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:2873882;1allele=A/T;version=Hapmap2;RS=rs820471241;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	2944352	2944451	.	+	.	Name=Tassel_length;B73v2_pos=7:2875160;1allele=G/T;version=Hapmap1;RS=rs131593817;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	3019622	3019721	.	+	.	Name=Leaf_width;B73v2_pos=7:2950345;1allele=/CGCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3020462	3020561	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:2951185;1allele=C/G;version=Hapmap2;RS=rs130460968;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3020836	3020935	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:2951559;1allele=A/C;version=Hapmap2;RS=rs131594211;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	3029829	3029928	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:2960552;1allele=C/T;version=Hapmap2;RS=rs845443916;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3030219	3030318	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:2960942;1allele=A/G;version=Hapmap2;RS=rs131594097;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	3030330	3030429	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:2961053;1allele=G/C;version=Hapmap1;RS=rs131594095;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	3037191	3037290	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:2967931;1allele=C/T;version=Hapmap2;RS=rs130460883;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3037248	3037347	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:2967988;1allele=G/C;version=Hapmap1;RS=rs130460881;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	3039726	3039825	.	+	.	Name=Leaf_width;B73v2_pos=7:2970466;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3039793	3039892	.	+	.	Name=Tassel_length;B73v2_pos=7:2970533;1allele=G/A;version=Hapmap2;RS=rs131593944;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	3039900	3039999	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:2970640;1allele=C/G;version=Hapmap2;RS=rs832626958;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3093613	3093712	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:3010324;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3105780	3105879	.	+	.	Name=Leaf_width;B73v2_pos=7:3022495;1allele=C/A;version=Hapmap1;RS=rs130461012;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	3106065	3106164	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3022780;1allele=T/A;version=Hapmap1;RS=rs831906917;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	3106837	3106936	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:3023553;1allele=A/C;version=Hapmap2;RS=rs131594399;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	3144496	3144595	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3070334;1allele=T/C;version=Hapmap2;RS=rs278176449;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3148522	3148621	.	+	.	Name=Leaf_width;B73v2_pos=7:3074360;1allele=G/C;version=Hapmap1;RS=rs131594473;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	3148981	3149080	.	+	.	Name=Leaf_width;B73v2_pos=7:3074819;1allele=G/C;version=Hapmap2;RS=rs834391256;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	3150203	3150302	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3076041;1allele=G/T;version=Hapmap2;RS=rs810528198;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	3158244	3158343	.	+	.	Name=Leaf_width;B73v2_pos=7:3084083;1allele=T/C;version=Hapmap2;RS=rs278176498;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3158465	3158564	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:3084304;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3159274	3159373	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:3085113;1allele=A/G;version=Hapmap2;RS=rs811992292;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	3159672	3159771	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:3085511;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3251948	3252047	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3159695;1allele=G/A;version=Hapmap2;RS=rs843378125;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	3252659	3252758	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3160406;1allele=T/C;version=Hapmap2;RS=rs832726959;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3253123	3253222	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3160870;1allele=G/A;version=Hapmap2;RS=rs810430320;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	3255468	3255567	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3163218;1allele=C/T;version=Hapmap1;RS=rs278176561;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3255619	3255718	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:3163369;1allele=C/G;version=Hapmap2;RS=rs131594543;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3255626	3255725	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3163376;1allele=G/T;version=Hapmap2;RS=rs131594544;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	3259275	3259374	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3167025;1allele=T/A;version=Hapmap2;RS=rs278176569;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	3262341	3262440	.	+	.	Name=Leaf_width;B73v2_pos=7:3170091;1allele=G/C;version=Hapmap2;RS=rs131594596;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	3262689	3262788	.	+	.	Name=Leaf_width;B73v2_pos=7:3170439;1allele=/AA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3262708	3262807	.	+	.	Name=Leaf_width;B73v2_pos=7:3170458;1allele=C/T;version=Hapmap1;RS=rs810564701;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3262816	3262915	.	+	.	Name=Leaf_width;B73v2_pos=7:3170566;1allele=C/T;version=Hapmap2;RS=rs130461200;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3264011	3264110	.	+	.	Name=Leaf_width;B73v2_pos=7:3171709;1allele=GA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3265742	3265840	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:3173365;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3276904	3277003	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3175399;1allele=A/T;version=Hapmap2;RS=rs848919852;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	3278655	3278754	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3177148;1allele=G/A;version=Hapmap2;RS=rs815250326;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	3279768	3279867	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3178261;1allele=C/T;version=Hapmap2;RS=rs278176616;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3283589	3283688	.	+	.	Name=Leaf_width;B73v2_pos=7:3182082;1allele=A/C;version=Hapmap1;RS=rs131594787;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	3292006	3292105	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:3190499;1allele=G/A;version=Hapmap2;RS=rs278176664;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	3295418	3295517	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3193911;1allele=T/C;version=Hapmap2;RS=rs847682787;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3340992	3341091	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:3239012;1allele=C/T;version=Hapmap2;RS=rs130461309;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3351642	3351741	.	+	.	Name=Leaf_width;B73v2_pos=7:3249662;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3357416	3357515	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:3255436;1allele=A/G;version=Hapmap2;RS=rs848987508;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	3379552	3379651	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:3276616;1allele=A/G;version=Hapmap2;RS=rs278176771;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	3382405	3382504	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3279469;1allele=C/T;version=Hapmap2;RS=rs130461383;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3684147	3684246	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3566523;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	3689809	3689908	.	+	.	Name=Leaf_width;B73v2_pos=7:3572191;1allele=T/A;version=Hapmap2;RS=rs278177199;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	3690648	3690747	.	+	.	Name=Stalk_strength;B73v2_pos=7:3573030;1allele=C/T;version=Hapmap2;RS=rs847431805;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3702646	3702745	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:3585015;1allele=C/T;version=Hapmap2;RS=rs278177249;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	3703442	3703541	.	+	.	Name=Stalk_strength;B73v2_pos=7:3585811;1allele=T/C;version=Hapmap2;RS=rs802069295;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	3704860	3704959	.	+	.	Name=Leaf_width;B73v2_pos=7:3587229;1allele=A/G;version=Hapmap2;RS=rs278177286;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	3705116	3705215	.	+	.	Name=Leaf_width;B73v2_pos=7:3587485;1allele=A/G;version=Hapmap2;RS=rs278177289;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	3710598	3710697	.	+	.	Name=Leaf_width;B73v2_pos=7:3592968;1allele=C/T;version=Hapmap2;RS=rs278177318;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	3722149	3722248	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:3604525;1allele=C/A;version=Hapmap2;RS=rs831237682;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	3975408	3975507	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:3844985;1allele=T/G;version=Hapmap2;RS=rs844399693;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	3997809	3997908	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:3867389;1allele=G/A;version=Hapmap2;RS=rs837730096;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	4016337	4016436	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:3885919;1allele=T/C;version=Hapmap2;RS=rs130462304;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	4034384	4034483	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3903960;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	4092975	4093074	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:3985822;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	4133395	4133494	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:4030031;1allele=-/C;version=Hapmap1;RS=rs850199711;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	4134524	4134623	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:4031160;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	4151702	4151801	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4048310;1allele=C/T;version=Hapmap2;RS=rs840292572;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	4166729	4166828	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4061855;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	4166736	4166835	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4061862;1allele=C/T;version=Hapmap1;RS=rs131595433;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	4169530	4169629	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4064656;1allele=A/G;version=Hapmap2;RS=rs1060915017;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	4171663	4171762	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:4066801;1allele=G/T;version=Hapmap2;RS=rs278178027;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	4171794	4171893	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:4066932;1allele=A/G;version=Hapmap2;RS=rs278178028;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	4172131	4172230	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4067269;1allele=T/A;version=Hapmap2;RS=rs821093302;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	4182972	4183071	.	+	.	Name=Leaf_width;B73v2_pos=7:4076863;1allele=A/C;version=Hapmap1;RS=rs131595483;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	4183848	4183947	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:4077739;1allele=T/C;version=Hapmap1;RS=rs131595491;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	4183864	4183963	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4077755;1allele=C/G;version=Hapmap1;RS=rs820062016;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	4184382	4184481	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:4078273;1allele=A/G;version=Hapmap2;RS=rs278178043;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	4185980	4186079	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:4079871;1allele=C/A;version=Hapmap2;RS=rs131595533;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	4186145	4186244	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4080036;1allele=G/T;version=Hapmap2;RS=rs131595534;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	4192891	4192990	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4086782;1allele=G/A;version=Hapmap2;RS=rs826200200;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	4217804	4217903	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4111898;1allele=A/T;version=Hapmap1;RS=rs131595636;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	4221763	4221862	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4115677;1allele=CAA/;version=Hapmap1;RS=rs131595647;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	4226679	4226778	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4120593;1allele=C/G;version=Hapmap2;RS=rs844510922;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	4266244	4266343	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4138054;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	4337332	4337431	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:4232596;1allele=C/T;version=Hapmap2;RS=rs278178226;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	4340444	4340543	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4235708;1allele=G/T;version=Hapmap2;RS=rs838552192;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	4341156	4341255	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4236420;1allele=T/C;version=Hapmap1;RS=rs130462638;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	4349608	4349707	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4244872;1allele=C/T;version=Hapmap2;RS=rs835748827;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	4365462	4365561	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4260729;1allele=G/T;version=Hapmap1;RS=rs130462790;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	4368377	4368476	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4263644;1allele=C/A;version=Hapmap2;RS=rs845705930;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	4747580	4747679	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4582793;1allele=/ACGTAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	4797809	4797908	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4613144;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	4904237	4904336	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4723557;1allele=A/G;version=Hapmap2;RS=rs130463448;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	4904500	4904599	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4723820;1allele=T/G;version=Hapmap2;RS=rs806551913;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	4961155	4961254	.	+	.	Name=Leaf_width;B73v2_pos=7:4796255;1allele=C/T;version=Hapmap1;RS=rs131596140;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	4993770	4993867	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:4828873;1allele=T/C;version=Hapmap2;RS=rs812632542;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	4997594	4997693	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4832702;1allele=A/G;version=Hapmap1;RS=rs131596396;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	5101496	5101595	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:4933649;1allele=A/G;version=Hapmap2;RS=rs827849401;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	5125590	5125689	.	+	.	Name=Leaf_width;B73v2_pos=7:4908147;1allele=T/C;version=Hapmap2;RS=rs130463712;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	5130628	5130727	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4955969;1allele=C/T;version=Hapmap2;RS=rs804804571;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	5136833	5136932	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:4962177;1allele=A/T;version=Hapmap2;RS=rs820661434;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	5266793	5266892	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:5100421;1allele=G/C;version=Hapmap2;RS=rs825311269;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	5273569	5273668	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:5107198;1allele=G/T;version=Hapmap1;RS=rs131597056;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	5361717	5361816	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5195654;1allele=T/C;version=Hapmap2;RS=rs831522461;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	5509817	5509916	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:5268807;1allele=G/C;version=Hapmap2;RS=rs809957645;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	5515432	5515531	.	+	.	Name=Tassel_length;B73v2_pos=7:5274498;1allele=C/G;version=Hapmap2;RS=rs278179976;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	5741957	5742056	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5520088;1allele=T/C;version=Hapmap2;RS=rs278180247;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	5858793	5858892	.	+	.	Name=Nitrate;B73v2_pos=7:5645449;1allele=A/G;version=Hapmap2;RS=rs844006522;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	5997063	5997162	.	+	.	Name=Stalk_strength;B73v2_pos=7:5773812;1allele=G/T;version=Hapmap2;RS=rs833991949;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	6139812	6139911	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5872332;1allele=C/T;version=Hapmap2;RS=rs839103520;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	6162084	6162183	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5893769;1allele=A/G;version=Hapmap2;RS=rs836259741;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	6162485	6162584	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5894170;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	6165920	6166019	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5897605;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	6201018	6201117	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5932291;1allele=C/T;version=Hapmap2;RS=rs130465570;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	6201652	6201751	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:5932925;1allele=/TA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	6340141	6340240	.	+	.	Name=Leaf_width;B73v2_pos=7:6069207;1allele=C/T;version=Hapmap1;RS=rs130465643;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	6341169	6341268	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:6070235;1allele=C/T;version=Hapmap1;RS=rs131598573;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	6586208	6586307	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:6306567;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	6604182	6604281	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:6324539;1allele=A/C;version=Hapmap2;RS=rs130465941;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	6615304	6615402	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:6335662;1allele=A/G;version=Hapmap2;RS=rs278181390;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	6616462	6616561	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:6336821;1allele=A/G;version=Hapmap2;RS=rs131599027;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	6637524	6637623	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:6357892;1allele=T/C;version=Hapmap2;RS=rs278181504;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	6755658	6755757	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:6483083;1allele=G/A;version=Hapmap2;RS=rs832910270;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	6801529	6801628	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:6543629;1allele=T/C;version=Hapmap2;RS=rs828268773;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	6805734	6805833	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:6547835;1allele=C/A;version=Hapmap2;RS=rs805537716;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	6870307	6870406	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:6537888;1allele=C/T;version=Hapmap2;RS=rs828394272;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	6990588	6990687	.	+	.	Name=Total_amino_acids;B73v2_pos=1:108417850;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	7131435	7131534	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:6856227;1allele=C/T;version=Hapmap2;RS=rs130467025;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	7204686	7204785	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:6921490;1allele=T/C;version=Hapmap2;RS=rs846691206;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	7293176	7293275	.	+	.	Name=Leaf_width;B73v2_pos=7:7002032;1allele=C/T;version=Hapmap2;RS=rs130467329;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	7349145	7349244	.	+	.	Name=Leaf_length;B73v2_pos=7:7058284;1allele=G/A;version=Hapmap2;RS=rs130467339;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	7351265	7351364	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:7060404;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	7406424	7406523	.	+	.	Name=Leaf_length;B73v2_pos=7:7119708;1allele=T/G;version=Hapmap2;RS=rs825395645;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	7789469	7789568	.	+	.	Name=Leaf_length;B73v2_pos=7:7497031;1allele=A/G;version=Hapmap2;RS=rs843191079;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	7869307	7869406	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:7572344;1allele=C/T;version=Hapmap2;RS=rs814305479;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	8089422	8089521	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:7914232;1allele=C/T;version=Hapmap2;RS=rs812895587;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	8127774	8127873	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:7952569;1allele=T/A;version=Hapmap2;RS=rs828511765;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	8133640	8133739	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:7958250;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	8304232	8304331	.	+	.	Name=Leaf_length;B73v2_pos=7:8122212;1allele=C/T;version=Hapmap2;RS=rs816376444;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	8359717	8359816	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:8178046;1allele=G/A;version=Hapmap2;RS=rs131600678;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	8571335	8571434	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:8362830;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	8805987	8806086	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:8640417;1allele=C/T;version=Hapmap2;RS=rs808140378;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	9076083	9076182	.	+	.	Name=Days_to_silk;B73v2_pos=7:8902795;1allele=T/C;version=Hapmap2;RS=rs278184229;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	9078254	9078353	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:8904966;1allele=C/G;version=Hapmap2;RS=rs807905574;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	9108718	9108817	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:8935430;1allele=C/T;version=Hapmap2;RS=rs817878397;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	9278347	9278446	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:9096741;1allele=G/T;version=Hapmap2;RS=rs848512000;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	9379977	9380076	.	+	.	Name=Days_to_silk;B73v2_pos=7:9206145;1allele=A/G;version=Hapmap2;RS=rs821034257;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	9423675	9423774	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:9250477;1allele=C/T;version=Hapmap2;RS=rs278184789;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	9428928	9429027	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:9255730;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	9433451	9433550	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:9260253;1allele=G/C;version=Hapmap2;RS=rs849978884;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	9505140	9505239	.	+	.	Name=Leaf_length;B73v2_pos=7:9332319;1allele=A/G;version=Hapmap2;RS=rs278184926;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	9539954	9540053	.	+	.	Name=Leaf_length;B73v2_pos=7:9367141;1allele=G/A;version=Hapmap2;RS=rs840177093;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	9860254	9860353	.	+	.	Name=Stalk_strength;B73v2_pos=7:9700078;1allele=C/T;version=Hapmap2;RS=rs837834612;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	9872067	9872166	.	+	.	Name=Days_to_silk;B73v2_pos=7:9711757;1allele=C/T;version=Hapmap2;RS=rs834665139;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	9919423	9919522	.	+	.	Name=Leaf_width;B73v2_pos=7:9760096;1allele=A/G;version=Hapmap2;RS=rs829770529;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	9920908	9921007	.	+	.	Name=Leaf_width;B73v2_pos=7:9761582;1allele=T/C;version=Hapmap2;RS=rs130470613;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	10086599	10086698	.	+	.	Name=Leaf_width;B73v2_pos=7:9921452;1allele=T/C;version=Hapmap2;RS=rs805439315;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	10212514	10212613	.	+	.	Name=Days_to_silk;B73v2_pos=7:10047702;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	10251839	10251938	.	+	.	Name=Days_to_silk;B73v2_pos=7:10083353;1allele=A/G;version=Hapmap2;RS=rs811939273;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	10376851	10376950	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:10208342;1allele=C/T;version=Hapmap2;RS=rs278186506;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	10783445	10783544	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:10624722;1allele=G/A;version=Hapmap2;RS=rs841460274;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	10873715	10873814	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:10733503;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	10952459	10952558	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:10794071;1allele=T/C;version=Hapmap2;RS=rs841507700;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	11143642	11143741	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:10988358;1allele=G/C;version=Hapmap2;RS=rs806317988;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	11198435	11198534	.	+	.	Name=Stalk_strength;B73v2_pos=7:11043160;1allele=G/A;version=Hapmap2;RS=rs831160457;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	11281080	11281179	.	+	.	Name=Leaf_width;B73v2_pos=7:11167219;1allele=T/A;version=Hapmap2;RS=rs826849282;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	11294026	11294125	.	+	.	Name=Leaf_length;B73v2_pos=7:11181369;1allele=G/A;version=Hapmap2;RS=rs828749921;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	11424724	11424823	.	+	.	Name=Stalk_strength;B73v2_pos=7:11264989;1allele=A/G;version=Hapmap2;RS=rs836229673;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	11672082	11672181	.	+	.	Name=Leaf_length;B73v2_pos=7:11581376;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	12288695	12288794	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:11988804;1allele=C/T;version=Hapmap2;RS=rs805654040;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	12316492	12316591	.	+	.	Name=Days_to_silk;B73v2_pos=7:12048344;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	12570910	12571009	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:12307530;1allele=A/C;version=Hapmap2;RS=rs278188689;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	12750509	12750608	.	+	.	Name=Leaf_length;B73v2_pos=7:12474324;1allele=A/G;version=Hapmap2;RS=rs726168627;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	12893616	12893715	.	+	.	Name=Cob_diameter;B73v2_pos=7:12615162;1allele=G/A;version=Hapmap2;RS=rs815034906;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	13092301	13092400	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:12775288;1allele=G/A;version=Hapmap2;RS=rs844621264;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	13120209	13120308	.	+	.	Name=Leaf_length;B73v2_pos=7:12811391;1allele=C/T;version=Hapmap2;RS=rs130475971;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	13168324	13168403	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:12854719;1allele=C/T;version=Hapmap2;RS=rs843793744;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	13527588	13527686	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:13290016;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	13733643	13733742	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:13403800;1allele=A/G;version=Hapmap2;RS=rs840094103;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	14194213	14194312	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:13840491;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14207388	14207487	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:13853709;1allele=T/C;version=Hapmap2;RS=rs831053506;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	14297449	14297548	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:13987647;1allele=A/G;version=Hapmap2;RS=rs824779153;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	14299046	14299145	.	+	.	Name=Days_to_silk;B73v2_pos=7:13989244;1allele=C/A;version=Hapmap2;RS=rs130477318;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	14332354	14332453	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:14020502;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14336781	14336880	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:14016074;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14382288	14382387	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:14069696;1allele=G/A;version=Hapmap2;RS=rs818078880;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	14498545	14498644	.	+	.	Name=Leaf_length;B73v2_pos=7:14184936;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14504977	14505076	.	+	.	Name=Days_to_silk;B73v2_pos=7:14191372;1allele=T/A;version=Hapmap2;RS=rs850354543;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	14672830	14672929	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:14367135;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14759867	14759966	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:14482514;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14775707	14775806	.	+	.	Name=Ear_height;B73v2_pos=7:14466668;1allele=T/C;version=Hapmap2;RS=rs814542035;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	14781365	14781464	.	+	.	Name=Days_to_silk;B73v2_pos=7:14461010;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14781669	14781768	.	+	.	Name=Days_to_silk;B73v2_pos=7:14460706;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14782805	14782904	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:14459570;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14820682	14820781	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:14514359;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14898670	14898769	.	+	.	Name=Stalk_strength;B73v2_pos=7:14588706;1allele=G/A;version=Hapmap2;RS=rs837841115;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	14900363	14900462	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:14590399;1allele=G/A;version=Hapmap1;RS=rs131605696;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	14901539	14901638	.	+	.	Name=Leaf_length;B73v2_pos=7:14591575;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	14917165	14917264	.	+	.	Name=Days_to_silk;B73v2_pos=7:14607203;1allele=A/G;version=Hapmap2;RS=rs825219414;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	14936877	14936976	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:14626757;1allele=C/T;version=Hapmap2;RS=rs847674669;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	15001650	15001749	.	+	.	Name=Total_amino_acids;B73v2_pos=7:14687112;1allele=T/A;version=Hapmap2;RS=rs843099055;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	15007469	15007568	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:14692931;1allele=G/T;version=Hapmap2;RS=rs850294561;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	15007472	15007571	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:14692934;1allele=G/A;version=Hapmap2;RS=rs835636410;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	15321196	15321295	.	+	.	Name=Leaf_length;B73v2_pos=7:14947190;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	15426952	15427051	.	+	.	Name=Days_to_silk;B73v2_pos=7:15039921;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	15442063	15442162	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:15055526;1allele=C/T;version=Hapmap2;RS=rs836207989;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	15442967	15443066	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15056430;1allele=G/A;version=Hapmap2;RS=rs278192628;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	15448146	15448245	.	+	.	Name=Nodes_to_ear;B73v2_pos=5:216987498;1allele=C/T;version=Hapmap2;RS=rs849252639;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	15452907	15453006	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15066373;1allele=T/C;version=Hapmap2;RS=rs817216123;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	15487761	15487860	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:15091039;1allele=A/G;version=Hapmap2;RS=rs805207277;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	15505217	15505316	.	+	.	Name=Leaf_length;B73v2_pos=7:15200481;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	15538403	15538502	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:15127988;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	15572513	15572612	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15156330;1allele=T/C;version=Hapmap1;RS=rs130479162;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	15572613	15572712	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15156430;1allele=T/C;version=Hapmap2;RS=rs130479163;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	15574030	15574129	.	+	.	Name=Ear_row_number;B73v2_pos=7:15157847;1allele=G/C;version=Hapmap2;RS=rs130479176;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	15574903	15575002	.	+	.	Name=Ear_row_number;B73v2_pos=7:15158720;1allele=T/C;version=Hapmap2;RS=rs130479184;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	15575138	15575237	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15158955;1allele=C/A;version=Hapmap2;RS=rs802294587;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	15576115	15576214	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15159932;1allele=A/T;version=Hapmap2;RS=rs130479196;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	15576115	15576214	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:15159932;1allele=A/T;version=Hapmap2;RS=rs130479196;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	15576115	15576214	.	+	.	Name=Plant_height;B73v2_pos=7:15159932;1allele=A/T;version=Hapmap2;RS=rs130479196;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	15581000	15581099	.	+	.	Name=Ear_height;B73v2_pos=7:15164820;1allele=T/C;version=Hapmap2;RS=rs817339941;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	15589368	15589467	.	+	.	Name=Ear_height;B73v2_pos=7:15210725;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	15589677	15589776	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:15211034;1allele=T/A;version=Hapmap2;RS=rs130479251;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	15611064	15611163	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:15232427;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	15656580	15656679	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:15277953;1allele=G/C;version=Hapmap2;RS=rs278193047;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	15712081	15712180	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15323674;1allele=C/T;version=Hapmap2;RS=rs1062093046;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	15713185	15713284	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15324778;1allele=C/A;version=Hapmap2;RS=rs278193225;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	15714394	15714493	.	+	.	Name=Leaf_width;B73v2_pos=7:15325987;1allele=G/A;version=Hapmap2;RS=rs130479417;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	15714401	15714500	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:15325994;1allele=C/T;version=Hapmap2;RS=rs812883461;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	15716874	15716973	.	+	.	Name=Leaf_length;B73v2_pos=7:15328467;1allele=T/C;version=Hapmap1;RS=rs131606062;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	15830489	15830588	.	+	.	Name=Ear_height;B73v2_pos=7:15470379;1allele=A/G;version=Hapmap1;RS=rs131606361;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	15940798	15940897	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:15550630;1allele=C/T;version=Hapmap2;RS=rs130479915;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	16035363	16035462	.	+	.	Name=Days_to_silk;B73v2_pos=7:15632701;1allele=G/A;version=Hapmap2;RS=rs813781411;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	16075929	16076028	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:15657759;1allele=T/C;version=Hapmap2;RS=rs841968359;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	16118206	16118305	.	+	.	Name=Leaf_length;B73v2_pos=7:15715876;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	16133207	16133306	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:15730257;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	16136708	16136807	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:15732804;1allele=G/A;version=Hapmap2;RS=rs278193624;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	16329950	16330049	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:15877630;1allele=G/A;version=Hapmap2;RS=rs814021689;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	16562100	16562199	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:16110459;1allele=A/C;version=Hapmap2;RS=rs847042212;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	16643315	16643414	.	+	.	Name=Plant_height;B73v2_pos=7:16193358;1allele=G/A;version=Hapmap2;RS=rs836380652;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	16643315	16643414	.	+	.	Name=Ear_height;B73v2_pos=7:16193358;1allele=G/A;version=Hapmap2;RS=rs836380652;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	16643315	16643414	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:16193358;1allele=G/A;version=Hapmap2;RS=rs836380652;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	16643349	16643448	.	+	.	Name=Ear_height;B73v2_pos=7:16193392;1allele=C/T;version=Hapmap2;RS=rs834317374;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	16643349	16643448	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:16193392;1allele=C/T;version=Hapmap2;RS=rs834317374;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	16643621	16643720	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:16193664;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	16700387	16700486	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:16313258;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	16872535	16872634	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:16408204;1allele=T/C;version=Hapmap2;RS=rs817346939;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	17223882	17223981	.	+	.	Name=Leaf_length;B73v2_pos=7:16764788;1allele=A/C;version=Hapmap2;RS=rs818699319;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	17341336	17341435	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:16883249;1allele=A/G;version=Hapmap2;RS=rs831799178;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	17426733	17426832	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:183917456;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17475338	17475437	.	+	.	Name=Plant_height;B73v2_pos=7:16996468;1allele=T/A;version=Hapmap2;RS=rs130482030;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	17477725	17477824	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:16998855;1allele=A/G;version=Hapmap2;RS=rs278195851;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	17662195	17662294	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:17180117;1allele=/TCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17729371	17729470	.	+	.	Name=Starch;B73v2_pos=7:17242297;1allele=+/-;version=Hapmap2;RS=rs1064233152;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	17734464	17734563	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:17247387;1allele=T/C;version=Hapmap2;RS=rs1061683963;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	17754462	17754561	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:17295426;1allele=C/G;version=Hapmap2;RS=rs801906316;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	17758381	17758480	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17255123;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17758484	17758583	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17255226;1allele=/GGACAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17758553	17758652	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17255295;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17759295	17759394	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17256037;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17796397	17796496	.	+	.	Name=Days_to_silk;B73v2_pos=7:17293138;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17865695	17865794	.	+	.	Name=Days_to_silk;B73v2_pos=7:17377363;1allele=C/G;version=Hapmap2;RS=rs848284156;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	17924962	17925061	.	+	.	Name=Days_to_silk;B73v2_pos=7:17437286;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17937123	17937222	.	+	.	Name=Days_to_silk;B73v2_pos=7:17448869;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17938168	17938267	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:17449914;1allele=C/T;version=Hapmap2;RS=rs278196501;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	17938952	17939051	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:17450698;1allele=C/T;version=Hapmap2;RS=rs130482454;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	17938952	17939051	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17450698;1allele=C/T;version=Hapmap2;RS=rs130482454;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	17940678	17940777	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17452424;1allele=T/C;version=Hapmap2;RS=rs834119106;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	17960450	17960549	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:17471335;1allele=T/G;version=Hapmap2;RS=rs278196556;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	17961696	17961795	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17472581;1allele=C/T;version=Hapmap2;RS=rs130482482;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	17969185	17969284	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17480068;1allele=G/A;version=Hapmap1;RS=rs131607391;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	17969373	17969472	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:17480256;1allele=GCGT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17969373	17969472	.	+	.	Name=Ear_row_number;B73v2_pos=7:17480256;1allele=GCGT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17969458	17969557	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17480341;1allele=G/C;version=Hapmap2;RS=rs130482532;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	17971159	17971258	.	+	.	Name=Ear_height;B73v2_pos=7:17482042;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17971217	17971316	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17482100;1allele=G/T;version=Hapmap2;RS=rs278196639;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	17971836	17971935	.	+	.	Name=Glucose;B73v2_pos=7:17482719;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	17974121	17974220	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17485004;1allele=G/A;version=Hapmap2;RS=rs130482544;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	17974649	17974748	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17485532;1allele=C/T;version=Hapmap2;RS=rs840423335;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	17978229	17978328	.	+	.	Name=Glucose;B73v2_pos=7:17489019;1allele=C/A;version=Hapmap2;RS=rs1061033291;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	17978537	17978636	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:17489327;1allele=C/T;version=Hapmap2;RS=rs726095596;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	17978537	17978636	.	+	.	Name=Plant_height;B73v2_pos=7:17489327;1allele=C/T;version=Hapmap2;RS=rs726095596;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	17978559	17978658	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:17489349;1allele=A/G;version=Hapmap2;RS=rs727220976;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	17978628	17978727	.	+	.	Name=Days_to_silk;B73v2_pos=7:17489418;1allele=G/A;version=Hapmap2;RS=rs836309909;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	18008111	18008210	.	+	.	Name=Days_to_silk;B73v2_pos=7:17518919;1allele=A/G;version=Hapmap2;RS=rs812679143;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	18018384	18018483	.	+	.	Name=Days_to_silk;B73v2_pos=7:17529191;1allele=T/C;version=Hapmap2;RS=rs826627740;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	18019667	18019765	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:17530476;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18019998	18020097	.	+	.	Name=Ear_height;B73v2_pos=7:17530809;1allele=C/T;version=Hapmap2;RS=rs278196818;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	18020735	18020834	.	+	.	Name=Height_above_ear;B73v2_pos=7:17531546;1allele=A/G;version=Hapmap2;RS=rs842857440;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	18021487	18021586	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:17532298;1allele=G/A;version=Hapmap2;RS=rs130482647;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	18022078	18022177	.	+	.	Name=Days_to_silk;B73v2_pos=7:17532889;1allele=G/T;version=Hapmap2;RS=rs278196858;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	18022158	18022257	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:17532969;1allele=C/T;version=Hapmap2;RS=rs818139346;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	18024874	18024973	.	+	.	Name=Ear_height;B73v2_pos=7:17535685;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18025054	18025153	.	+	.	Name=Height_above_ear;B73v2_pos=7:17535865;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18067503	18067602	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:17577327;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18067503	18067602	.	+	.	Name=Plant_height;B73v2_pos=7:17577327;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18085553	18085652	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:17589618;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18085553	18085652	.	+	.	Name=Plant_height;B73v2_pos=7:17589618;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18088000	18088099	.	+	.	Name=Plant_height;B73v2_pos=7:17592065;1allele=G/A;version=Hapmap2;RS=rs846189762;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	18113091	18113190	.	+	.	Name=Plant_height;B73v2_pos=7:17617159;1allele=G/A;version=Hapmap2;RS=rs840306146;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	18114502	18114601	.	+	.	Name=Plant_height;B73v2_pos=7:17618570;1allele=C/T;version=Hapmap2;RS=rs818171167;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	18189964	18190063	.	+	.	Name=Leaf_length;B73v2_pos=7:17695802;1allele=A/G;version=Hapmap2;RS=rs823313843;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	18190312	18190411	.	+	.	Name=Days_to_silk;B73v2_pos=7:17696150;1allele=G/A;version=Hapmap2;RS=rs130482917;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	18190320	18190419	.	+	.	Name=Ear_row_number;B73v2_pos=7:17696158;1allele=G/A;version=Hapmap2;RS=rs809048180;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	18191650	18191749	.	+	.	Name=Days_to_silk;B73v2_pos=7:17697488;1allele=A/G;version=Hapmap2;RS=rs130482920;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	18192909	18193008	.	+	.	Name=Days_to_silk;B73v2_pos=7:17698747;1allele=+/-;version=Hapmap2;RS=rs809491577;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	18198998	18199097	.	+	.	Name=Days_to_silk;B73v2_pos=7:17704836;1allele=T/C;version=Hapmap1;RS=rs131607588;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	18202578	18202677	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:17708416;1allele=C/T;version=Hapmap2;RS=rs278197320;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	18262982	18263081	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:17769687;1allele=G/A;version=Hapmap2;RS=rs824507800;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	18434764	18434863	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:17958266;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18465254	18465353	.	+	.	Name=Ear_height;B73v2_pos=7:17927776;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18482958	18483057	.	+	.	Name=Ear_height;B73v2_pos=7:17981452;1allele=C/T;version=Hapmap2;RS=rs842437047;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	18482958	18483057	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:17981452;1allele=C/T;version=Hapmap2;RS=rs842437047;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	18632334	18632433	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:18122981;1allele=A/G;version=Hapmap2;RS=rs278198353;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	18833362	18833461	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:18317813;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	18944688	18944787	.	+	.	Name=Ear_height;B73v2_pos=7:18419012;1allele=C/T;version=Hapmap2;RS=rs823500824;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	18954012	18954111	.	+	.	Name=Leaf_width;B73v2_pos=7:18428336;1allele=T/C;version=Hapmap2;RS=rs830151905;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	18997915	18998014	.	+	.	Name=Starch;B73v2_pos=7:18473200;1allele=C/T;version=Hapmap2;RS=rs833957533;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	19059435	19059534	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:18542471;1allele=G/C;version=Hapmap2;RS=rs832270197;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	19151830	19151929	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:18626517;1allele=C/G;version=Hapmap1;RS=rs131608201;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	19180734	19180833	.	+	.	Name=Starch;B73v2_pos=7:18655190;1allele=A/G;version=Hapmap2;RS=rs724776381;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	19183534	19183633	.	+	.	Name=Starch;B73v2_pos=7:18657991;1allele=T/A;version=Hapmap2;RS=rs813172169;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	19258226	19258325	.	+	.	Name=Tassel_length;B73v2_pos=7:126247765;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	19385806	19385905	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:18860216;1allele=A/G;version=Hapmap1;RS=rs131608297;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	19385806	19385905	.	+	.	Name=Starch;B73v2_pos=7:18860216;1allele=A/G;version=Hapmap1;RS=rs131608297;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	19456262	19456361	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:18931008;1allele=C/A;version=Hapmap2;RS=rs837239826;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	19504808	19504907	.	+	.	Name=Starch;B73v2_pos=7:18972296;1allele=C/G;version=Hapmap2;RS=rs130484696;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	19504824	19504923	.	+	.	Name=Starch;B73v2_pos=7:18972312;1allele=A/G;version=Hapmap2;RS=rs828082684;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	19505132	19505231	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:18972620;1allele=G/A;version=Hapmap2;RS=rs130484699;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	19583476	19583575	.	+	.	Name=Leaf_length;B73v2_pos=7:19055704;1allele=C/T;version=Hapmap2;RS=rs821910160;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	19744214	19744313	.	+	.	Name=Days_to_silk;B73v2_pos=7:19209385;1allele=C/T;version=Hapmap2;RS=rs814235308;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	19806031	19806130	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:19263197;1allele=G/C;version=Hapmap2;RS=rs836111001;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	19832621	19832720	.	+	.	Name=Days_to_silk;B73v2_pos=7:19289798;1allele=T/A;version=Hapmap2;RS=rs809305326;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	19962837	19962936	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:19419742;1allele=C/T;version=Hapmap2;RS=rs131608711;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	20223774	20223873	.	+	.	Name=Plant_height;B73v2_pos=7:19701845;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20329400	20329499	.	+	.	Name=Ear_height;B73v2_pos=7:19592714;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20330199	20330298	.	+	.	Name=Height_above_ear;B73v2_pos=7:19591915;1allele=A/T;version=Hapmap2;RS=rs130485554;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	20330199	20330298	.	+	.	Name=Plant_height;B73v2_pos=7:19591915;1allele=A/T;version=Hapmap2;RS=rs130485554;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	20330255	20330354	.	+	.	Name=Plant_height;B73v2_pos=7:19591859;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20330255	20330354	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:19591859;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20330307	20330406	.	+	.	Name=Plant_height;B73v2_pos=7:19591807;1allele=G/A;version=Hapmap2;RS=rs130485553;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	20330336	20330435	.	+	.	Name=Plant_height;B73v2_pos=7:19591778;1allele=T/C;version=Hapmap2;RS=rs824574483;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	20409270	20409369	.	+	.	Name=Plant_height;B73v2_pos=7:19496688;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20410958	20411057	.	+	.	Name=Height_above_ear;B73v2_pos=7:19495000;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20410958	20411057	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:19495000;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20411065	20411164	.	+	.	Name=Height_above_ear;B73v2_pos=7:19494893;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20411065	20411164	.	+	.	Name=Plant_height;B73v2_pos=7:19494893;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20411065	20411164	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:19494893;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20415263	20415362	.	+	.	Name=Plant_height;B73v2_pos=7:19490695;1allele=T/C;version=Hapmap2;RS=rs131608765;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	20415284	20415383	.	+	.	Name=Plant_height;B73v2_pos=7:19490674;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20415326	20415425	.	+	.	Name=Plant_height;B73v2_pos=7:19490632;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20415559	20415658	.	+	.	Name=Height_above_ear;B73v2_pos=7:19490399;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20415559	20415658	.	+	.	Name=Plant_height;B73v2_pos=7:19490399;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20416176	20416275	.	+	.	Name=Plant_height;B73v2_pos=7:19489782;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20461624	20461723	.	+	.	Name=Plant_height;B73v2_pos=7:19453774;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20482745	20482844	.	+	.	Name=Plant_height;B73v2_pos=7:19783102;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20535667	20535766	.	+	.	Name=Leaf_length;B73v2_pos=7:19834958;1allele=G/A;version=Hapmap2;RS=rs808578575;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	20535667	20535766	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:19834958;1allele=G/A;version=Hapmap2;RS=rs808578575;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	20535959	20536058	.	+	.	Name=Days_to_silk;B73v2_pos=7:19835250;1allele=A/G;version=Hapmap2;RS=rs837129812;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	20546271	20546370	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:19845568;1allele=C/A;version=Hapmap2;RS=rs130485843;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	20547333	20547432	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:19846630;1allele=A/G;version=Hapmap2;RS=rs727092964;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	20572614	20572713	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:19871550;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20594195	20594294	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:19892805;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	20594276	20594375	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:19892886;1allele=G/T;version=Hapmap2;RS=rs830064700;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	20687058	20687157	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:19988862;1allele=C/T;version=Hapmap2;RS=rs845464875;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	20890792	20890891	.	+	.	Name=Plant_height;B73v2_pos=7:20164653;1allele=G/T;version=Hapmap2;RS=rs833718063;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	20891685	20891784	.	+	.	Name=Plant_height;B73v2_pos=7:20165546;1allele=G/T;version=Hapmap2;RS=rs131608969;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	20898427	20898526	.	+	.	Name=Plant_height;B73v2_pos=7:20172288;1allele=A/G;version=Hapmap2;RS=rs810224688;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	20909985	20910084	.	+	.	Name=Plant_height;B73v2_pos=7:20184066;1allele=T/C;version=Hapmap2;RS=rs823714071;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	20920645	20920744	.	+	.	Name=Fructose;B73v2_pos=7:20194727;1allele=C/T;version=Hapmap2;RS=rs1063061340;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	20920949	20921048	.	+	.	Name=Fructose;B73v2_pos=7:20195031;1allele=A/C;version=Hapmap2;RS=rs278201210;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	20966947	20967046	.	+	.	Name=Starch;B73v2_pos=7:20241032;1allele=A/C;version=Hapmap1;RS=rs130486264;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	20966947	20967046	.	+	.	Name=Fructose;B73v2_pos=7:20241032;1allele=A/C;version=Hapmap1;RS=rs130486264;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	20966947	20967046	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:20241032;1allele=A/C;version=Hapmap1;RS=rs130486264;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	20967313	20967412	.	+	.	Name=Fructose;B73v2_pos=7:20241398;1allele=C/T;version=Hapmap2;RS=rs131609048;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	21060322	21060421	.	+	.	Name=Starch;B73v2_pos=7:20326275;1allele=G/A;version=Hapmap2;RS=rs840484520;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21176049	21176148	.	+	.	Name=Starch;B73v2_pos=7:20448940;1allele=G/A;version=Hapmap2;RS=rs130486691;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21177271	21177370	.	+	.	Name=Starch;B73v2_pos=7:20450162;1allele=G/C;version=Hapmap2;RS=rs807835747;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	21178890	21178989	.	+	.	Name=Leaf_length;B73v2_pos=7:20451781;1allele=G/A;version=Hapmap2;RS=rs821109660;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21179071	21179170	.	+	.	Name=Leaf_length;B73v2_pos=7:20451962;1allele=G/A;version=Hapmap2;RS=rs819150409;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21179306	21179405	.	+	.	Name=Leaf_length;B73v2_pos=7:20452197;1allele=C/G;version=Hapmap2;RS=rs825638266;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	21204211	21204310	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:20477110;1allele=T/C;version=Hapmap2;RS=rs278201927;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	21291111	21291210	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:20551822;1allele=C/T;version=Hapmap2;RS=rs847973868;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	21292534	21292633	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:20553245;1allele=G/A;version=Hapmap2;RS=rs725122093;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21339540	21339639	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:20561465;1allele=C/T;version=Hapmap2;RS=rs829049230;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	21365029	21365128	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:20626237;1allele=C/T;version=Hapmap2;RS=rs838414818;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	21365918	21366017	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:20627126;1allele=G/A;version=Hapmap2;RS=rs130487268;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	21365918	21366017	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:20627126;1allele=G/A;version=Hapmap2;RS=rs130487268;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	21400422	21400521	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:20661634;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	21408597	21408696	.	+	.	Name=Sucrose;B73v2_pos=7:20669809;1allele=A/G;version=Hapmap2;RS=rs807749306;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21413843	21413941	.	+	.	Name=Height_above_ear;B73v2_pos=7:20674926;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	21428434	21428533	.	+	.	Name=Ear_row_number;B73v2_pos=7:20689525;1allele=A/G;version=Hapmap2;RS=rs130487131;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21450768	21450867	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:20710536;1allele=A/G;version=Hapmap2;RS=rs278202360;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	21450851	21450950	.	+	.	Name=Ear_row_number;B73v2_pos=7:20710619;1allele=C/T;version=Hapmap2;RS=rs803289625;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	21451846	21451945	.	+	.	Name=Days_to_silk;B73v2_pos=7:20711614;1allele=G/A;version=Hapmap2;RS=rs828416869;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21452520	21452619	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:20712288;1allele=G/A;version=Hapmap2;RS=rs131609254;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21619657	21619756	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:20757798;1allele=C/T;version=Hapmap2;RS=rs278202588;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	21716402	21716501	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:20853323;1allele=G/A;version=Hapmap2;RS=rs847168944;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21757111	21757210	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:20892187;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	21758001	21758100	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:20893077;1allele=C/T;version=Hapmap2;RS=rs823812527;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	21833421	21833520	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:20961855;1allele=A/G;version=Hapmap2;RS=rs807230941;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	21833421	21833520	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:20961855;1allele=A/G;version=Hapmap2;RS=rs807230941;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	21867718	21867817	.	+	.	Name=Ear_row_number;B73v2_pos=7:20995831;1allele=G/A;version=Hapmap1;RS=rs835827613;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21905245	21905344	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:21096111;1allele=T/G;version=Hapmap2;RS=rs130488259;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	21905644	21905743	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:21096510;1allele=G/A;version=Hapmap2;RS=rs820245046;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21905837	21905936	.	+	.	Name=Height_above_ear;B73v2_pos=7:21096703;1allele=C/T;version=Hapmap2;RS=rs850191687;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	21931226	21931325	.	+	.	Name=Height_above_ear;B73v2_pos=7:21121581;1allele=C/T;version=Hapmap2;RS=rs130488229;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	21934687	21934786	.	+	.	Name=Starch;B73v2_pos=7:21125042;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	21944841	21944940	.	+	.	Name=Ear_row_number;B73v2_pos=7:21135196;1allele=C/T;version=Hapmap1;RS=rs130488144;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	21953008	21953107	.	+	.	Name=Starch;B73v2_pos=7:21143363;1allele=T/C;version=Hapmap2;RS=rs278203377;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	21955069	21955168	.	+	.	Name=Starch;B73v2_pos=7:21145424;1allele=T/A;version=Hapmap2;RS=rs827008591;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	21960303	21960402	.	+	.	Name=Ear_row_number;B73v2_pos=7:21150658;1allele=C/G;version=Hapmap1;RS=rs131609484;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	21960539	21960638	.	+	.	Name=Ear_row_number;B73v2_pos=7:21150894;1allele=C/G;version=Hapmap1;RS=rs131609478;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	22069582	22069681	.	+	.	Name=Tassel_length;B73v2_pos=7:21197480;1allele=A/G;version=Hapmap2;RS=rs278203538;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	22238225	22238324	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:21368202;1allele=C/T;version=Hapmap2;RS=rs840462245;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22238225	22238324	.	+	.	Name=Days_to_silk;B73v2_pos=7:21368202;1allele=C/T;version=Hapmap2;RS=rs840462245;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22300122	22300221	.	+	.	Name=Sucrose;B73v2_pos=7:21422581;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	22345274	22345373	.	+	.	Name=Starch;B73v2_pos=7:21467369;1allele=C/T;version=Hapmap2;RS=rs820837253;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22377861	22377960	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:21500440;1allele=A/G;version=Hapmap2;RS=rs1060975822;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	22382949	22383048	.	+	.	Name=Ear_row_number;B73v2_pos=7:21505528;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	22383081	22383180	.	+	.	Name=Ear_row_number;B73v2_pos=7:21505660;1allele=C/T;version=Hapmap2;RS=rs278203943;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	22383142	22383241	.	+	.	Name=Ear_row_number;B73v2_pos=7:21505721;1allele=G/A;version=Hapmap2;RS=rs278203945;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	22383220	22383319	.	+	.	Name=Ear_row_number;B73v2_pos=7:21505799;1allele=C/T;version=Hapmap2;RS=rs278203949;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	22383501	22383600	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:21506080;1allele=G/A;version=Hapmap2;RS=rs278203957;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	22384515	22384614	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:21507094;1allele=G/A;version=Hapmap2;RS=rs278203960;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	22384619	22384718	.	+	.	Name=Ear_row_number;B73v2_pos=7:21507198;1allele=C/T;version=Hapmap2;RS=rs1063636096;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	22385538	22385637	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:21508117;1allele=G/T;version=Hapmap2;RS=rs278203970;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	22385538	22385637	.	+	.	Name=Starch;B73v2_pos=7:21508117;1allele=G/T;version=Hapmap2;RS=rs278203970;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	22386041	22386140	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:21508620;1allele=G/A;version=Hapmap1;RS=rs130488605;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	22386553	22386652	.	+	.	Name=Tassel_length;B73v2_pos=7:21509132;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	22455676	22455775	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:21575258;1allele=T/C;version=Hapmap2;RS=rs814910503;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22456290	22456389	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:21575872;1allele=T/C;version=Hapmap2;RS=rs839738978;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22460139	22460238	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:21579721;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	22515810	22515909	.	+	.	Name=Fructose;B73v2_pos=7:21635402;1allele=G/A;version=Hapmap1;RS=rs131609964;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	22516636	22516735	.	+	.	Name=Starch;B73v2_pos=7:21636228;1allele=C/G;version=Hapmap1;RS=rs131609977;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22517227	22517326	.	+	.	Name=Height_above_ear;B73v2_pos=7:21636819;1allele=C/T;version=Hapmap2;RS=rs278204329;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	22518436	22518535	.	+	.	Name=Height_above_ear;B73v2_pos=7:21638028;1allele=T/C;version=Hapmap1;RS=rs131609986;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	22521685	22521784	.	+	.	Name=Height_above_ear;B73v2_pos=7:21641246;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	22660817	22660916	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:21796343;1allele=C/T;version=Hapmap2;RS=rs278204438;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22663003	22663102	.	+	.	Name=Ear_row_number;B73v2_pos=7:21798529;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	22704254	22704353	.	+	.	Name=Tassel_length;B73v2_pos=7:21732946;1allele=C/T;version=Hapmap2;RS=rs130489004;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22705921	22706020	.	+	.	Name=Tassel_length;B73v2_pos=7:21839166;1allele=G/A;version=Hapmap2;RS=rs278204517;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	22706925	22707024	.	+	.	Name=Tassel_length;B73v2_pos=7:21840170;1allele=G/T;version=Hapmap2;RS=rs278204534;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	22716587	22716686	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:21849835;1allele=G/A;version=Hapmap2;RS=rs809431062;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	22734275	22734374	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:21867537;1allele=G/A;version=Hapmap2;RS=rs826482621;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	22734877	22734976	.	+	.	Name=Height_above_ear;B73v2_pos=7:21868139;1allele=A/C;version=Hapmap2;RS=rs826032700;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	22786129	22786228	.	+	.	Name=Tassel_length;B73v2_pos=7:21900056;1allele=C/T;version=Hapmap2;RS=rs130489175;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	22838250	22838349	.	+	.	Name=Starch;B73v2_pos=7:21953211;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	22871917	22872016	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:22003981;1allele=G/T;version=Hapmap2;RS=rs1060838034;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	22886045	22886144	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22018109;1allele=C/T;version=Hapmap2;RS=rs130489493;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	22969686	22969785	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22095863;1allele=A/C;version=Hapmap2;RS=rs819696495;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	22995870	22995969	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22116824;1allele=T/A;version=Hapmap2;RS=rs1061753088;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	23110208	23110307	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22228918;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	23141391	23141490	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22258056;1allele=C/T;version=Hapmap2;RS=rs724692315;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	23242951	23243050	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:22349621;1allele=A/C;version=Hapmap2;RS=rs1064225898;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	23242951	23243050	.	+	.	Name=Height_above_ear;B73v2_pos=7:22349621;1allele=A/C;version=Hapmap2;RS=rs1064225898;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	23269403	23269502	.	+	.	Name=Stalk_strength;B73v2_pos=7:22378827;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	23360689	23360788	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:22470287;1allele=C/T;version=Hapmap2;RS=rs1063903629;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	23391620	23391719	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22501035;1allele=A/G;version=Hapmap2;RS=rs832034389;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	23391736	23391835	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22501151;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	23392211	23392310	.	+	.	Name=Ear_row_number;B73v2_pos=7:22501626;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	23393319	23393418	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22502734;1allele=A/G;version=Hapmap2;RS=rs278205406;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	23396108	23396207	.	+	.	Name=Ear_height;B73v2_pos=7:22505523;1allele=G/A;version=Hapmap2;RS=rs812900754;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	23396108	23396207	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:22505523;1allele=G/A;version=Hapmap2;RS=rs812900754;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	23398019	23398118	.	+	.	Name=Fructose;B73v2_pos=7:22507434;1allele=C/A;version=Hapmap2;RS=rs826555178;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	23400562	23400661	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22509977;1allele=C/G;version=Hapmap2;RS=rs130489835;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	23402240	23402339	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22511655;1allele=A/G;version=Hapmap2;RS=rs278205431;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	23407073	23407172	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22516488;1allele=G/A;version=Hapmap2;RS=rs130489887;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	23413503	23413602	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22522916;1allele=G/A;version=Hapmap2;RS=rs1063377394;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	23416822	23416921	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:22526235;1allele=G/A;version=Hapmap2;RS=rs130489959;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	23416822	23416921	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22526235;1allele=G/A;version=Hapmap2;RS=rs130489959;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	23417156	23417255	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22526569;1allele=G/A;version=Hapmap2;RS=rs131610317;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	23417311	23417410	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22526724;1allele=T/C;version=Hapmap2;RS=rs278205479;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	23418484	23418583	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22527897;1allele=C/T;version=Hapmap2;RS=rs130489978;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	23418521	23418620	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22527934;1allele=C/T;version=Hapmap2;RS=rs130489979;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	23419289	23419388	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:22528702;1allele=A/G;version=Hapmap2;RS=rs278205486;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	23443063	23443162	.	+	.	Name=Plant_height;B73v2_pos=7:22552958;1allele=A/C;version=Hapmap2;RS=rs278205557;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	23443063	23443162	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:22552958;1allele=A/C;version=Hapmap2;RS=rs278205557;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	23444190	23444289	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:22554085;1allele=G/T;version=Hapmap2;RS=rs278205567;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	23453453	23453552	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:22563351;1allele=C/A;version=Hapmap2;RS=rs1063281739;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	23491274	23491373	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:22599881;1allele=G/T;version=Hapmap2;RS=rs278205669;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	23537610	23537709	.	+	.	Name=Plant_height;B73v2_pos=7:22644256;1allele=C/T;version=Hapmap2;RS=rs833324340;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	23537610	23537709	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:22644256;1allele=C/T;version=Hapmap2;RS=rs833324340;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	23802033	23802132	.	+	.	Name=Stalk_strength;B73v2_pos=2:231152724;1allele=G/A;version=Hapmap2;RS=rs132010994;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	24394827	24394926	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:23456240;1allele=G/T;version=Hapmap2;RS=rs832766399;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	24518798	24518897	.	+	.	Name=Leaf_width;B73v2_pos=7:23653445;1allele=C/T;version=Hapmap2;RS=rs278206582;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24603973	24604072	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:23730342;1allele=A/G;version=Hapmap2;RS=rs1063566286;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	24630919	24631018	.	+	.	Name=Plant_height;B73v2_pos=7:23757288;1allele=T/C;version=Hapmap2;RS=rs1060686440;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24630919	24631018	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:23757288;1allele=T/C;version=Hapmap2;RS=rs1060686440;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24632323	24632422	.	+	.	Name=Plant_height;B73v2_pos=7:23758692;1allele=T/C;version=Hapmap2;RS=rs278206896;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24636578	24636677	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:23762947;1allele=C/T;version=Hapmap2;RS=rs814567960;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	24637129	24637228	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:23763498;1allele=T/C;version=Hapmap2;RS=rs844071559;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	24639972	24640071	.	+	.	Name=Plant_height;B73v2_pos=7:23766341;1allele=G/A;version=Hapmap2;RS=rs724553654;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	24766041	24766140	.	+	.	Name=Height_above_ear;B73v2_pos=7:23878972;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	24773941	24774040	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:23886873;1allele=C/T;version=Hapmap2;RS=rs849290968;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24782804	24782903	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:23895737;1allele=C/T;version=Hapmap2;RS=rs850196623;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	24787274	24787373	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:23900207;1allele=T/C;version=Hapmap2;RS=rs806396538;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24787853	24787952	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:23900786;1allele=T/G;version=Hapmap2;RS=rs848521114;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	24789616	24789715	.	+	.	Name=Height_above_ear;B73v2_pos=7:23902549;1allele=T/C;version=Hapmap2;RS=rs832888506;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24805576	24805675	.	+	.	Name=Height_above_ear;B73v2_pos=7:23918512;1allele=G/A;version=Hapmap1;RS=rs131611002;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	24814972	24815071	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:23925115;1allele=C/T;version=Hapmap2;RS=rs832613881;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24814972	24815071	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:23925115;1allele=C/T;version=Hapmap2;RS=rs832613881;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	24902768	24902867	.	+	.	Name=Stalk_strength;B73v2_pos=7:24020777;1allele=G/A;version=Hapmap2;RS=rs814366222;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	24903350	24903449	.	+	.	Name=Ear_row_number;B73v2_pos=7:24021359;1allele=G/A;version=Hapmap2;RS=rs845852533;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	24903616	24903715	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:24021625;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25050661	25050760	.	+	.	Name=Plant_height;B73v2_pos=7:24155364;1allele=A/C;version=Hapmap2;RS=rs829797146;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	25051420	25051519	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:24156123;1allele=G/A;version=Hapmap2;RS=rs818419642;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	25109973	25110072	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:24221338;1allele=A/G;version=Hapmap2;RS=rs835955710;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	25195632	25195731	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:24243164;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25367930	25368029	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:24458643;1allele=A/G;version=Hapmap2;RS=rs837096999;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	25554167	25554266	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:24656641;1allele=C/T;version=Hapmap2;RS=rs831718171;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	25588132	25588229	.	+	.	Name=Total_amino_acids;B73v2_pos=7:24690415;1allele=C/T;version=Hapmap2;RS=rs278207628;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	25698066	25698165	.	+	.	Name=Height_above_ear;B73v2_pos=7:24785171;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25698102	25698201	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:24785207;1allele=A/G;version=Hapmap2;RS=rs834027107;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	25698420	25698519	.	+	.	Name=Height_above_ear;B73v2_pos=7:24785525;1allele=T/C;version=Hapmap2;RS=rs130496160;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	25698667	25698766	.	+	.	Name=Plant_height;B73v2_pos=7:24785772;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25699050	25699149	.	+	.	Name=Height_above_ear;B73v2_pos=7:24786155;1allele=C/T;version=Hapmap2;RS=rs1063159534;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	25704972	25705071	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:24843521;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25705461	25705560	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:24843032;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25767019	25767118	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:24849457;1allele=A/G;version=Hapmap2;RS=rs1060856784;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	25767019	25767118	.	+	.	Name=Height_above_ear;B73v2_pos=7:24849457;1allele=A/G;version=Hapmap2;RS=rs1060856784;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	25837002	25837100	.	+	.	Name=Starch;B73v2_pos=7:24919538;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25947879	25947978	.	+	.	Name=Nodes_above_ear;B73v2_pos=4:196896419;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	25988457	25988556	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:25066244;1allele=T/C;version=Hapmap1;RS=rs131611385;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	26260259	26260358	.	+	.	Name=Plant_height;B73v2_pos=7:25160854;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	26260259	26260358	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:25160854;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	26260447	26260546	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:25160666;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	26260599	26260698	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:25160514;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	26432349	26432448	.	+	.	Name=Height_above_ear;B73v2_pos=7:25499362;1allele=G/A;version=Hapmap2;RS=rs278208312;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	26442225	26442324	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:25509110;1allele=G/C;version=Hapmap2;RS=rs131611620;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	26464649	26464748	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:25531053;1allele=C/T;version=Hapmap2;RS=rs130496519;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	26465582	26465681	.	+	.	Name=Height_above_ear;B73v2_pos=7:25531986;1allele=T/C;version=Hapmap2;RS=rs130496526;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	26465582	26465681	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:25531986;1allele=T/C;version=Hapmap2;RS=rs130496526;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	26515490	26515589	.	+	.	Name=Starch;B73v2_pos=7:25581909;1allele=T/C;version=Hapmap2;RS=rs278208506;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	26569474	26569573	.	+	.	Name=Starch;B73v2_pos=7:25657264;1allele=T/A;version=Hapmap2;RS=rs278208544;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	26621588	26621687	.	+	.	Name=Stalk_strength;B73v2_pos=7:25685591;1allele=A/T;version=Hapmap1;RS=rs131611678;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	26627241	26627340	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:25691246;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	26627265	26627364	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:25691270;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	26627275	26627374	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:25691280;1allele=C/A;version=Hapmap2;RS=rs1064460431;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	26627275	26627374	.	+	.	Name=Height_above_ear;B73v2_pos=7:25691280;1allele=C/A;version=Hapmap2;RS=rs1064460431;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	26657803	26657902	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:25722748;1allele=C/T;version=Hapmap2;RS=rs842199018;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	26747155	26747254	.	+	.	Name=Height_above_ear;B73v2_pos=7:25812716;1allele=A/G;version=Hapmap1;RS=rs818431763;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	26752028	26752127	.	+	.	Name=Starch;B73v2_pos=7:25817589;1allele=G/C;version=Hapmap2;RS=rs130496678;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	26764474	26764573	.	+	.	Name=Starch;B73v2_pos=7:25870026;1allele=C/T;version=Hapmap2;RS=rs823360765;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	26783443	26783542	.	+	.	Name=Starch;B73v2_pos=7:25888999;1allele=C/A;version=Hapmap2;RS=rs130496821;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	26805991	26806090	.	+	.	Name=Total_amino_acids;B73v2_pos=7:25911491;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	26919777	26919876	.	+	.	Name=Total_amino_acids;B73v2_pos=7:26018067;1allele=G/A;version=Hapmap2;RS=rs837140884;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	27002623	27002722	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:26100925;1allele=T/C;version=Hapmap2;RS=rs1061079703;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	27066569	27066668	.	+	.	Name=Total_amino_acids;B73v2_pos=7:26166361;1allele=T/C;version=Hapmap2;RS=rs1064292910;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	27269530	27269629	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:26370159;1allele=G/A;version=Hapmap2;RS=rs825995838;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	27318682	27318781	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:26419319;1allele=T/C;version=Hapmap2;RS=rs843344467;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	27347230	27347329	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:26447869;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	27349900	27349999	.	+	.	Name=Fructose;B73v2_pos=7:26450487;1allele=G/C;version=Hapmap1;RS=rs130497353;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	27374876	27374975	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:26483933;1allele=A/C;version=Hapmap2;RS=rs131612064;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	27384471	27384570	.	+	.	Name=Tassel_length;B73v2_pos=7:26493529;1allele=G/C;version=Hapmap2;RS=rs808972816;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	27604347	27604446	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:26770124;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	27716561	27716660	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:26827562;1allele=T/C;version=Hapmap2;RS=rs807290118;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	27716561	27716660	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:26827562;1allele=T/C;version=Hapmap2;RS=rs807290118;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	27719101	27719200	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:26830269;1allele=A/T;version=Hapmap2;RS=rs815909548;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	27750919	27751018	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:26860059;1allele=C/G;version=Hapmap2;RS=rs726696107;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	27752373	27752472	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:26861513;1allele=A/C;version=Hapmap2;RS=rs278210196;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	27756512	27756611	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:26865652;1allele=A/G;version=Hapmap2;RS=rs828020565;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	27786978	27787077	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:26955457;1allele=A/G;version=Hapmap2;RS=rs812522550;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	27786994	27787093	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:26955473;1allele=A/G;version=Hapmap2;RS=rs847110535;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	27791090	27791189	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:26959569;1allele=T/C;version=Hapmap2;RS=rs278210246;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	27902097	27902196	.	+	.	Name=Ear_height;B73v2_pos=7:27012749;1allele=G/A;version=Hapmap2;RS=rs833613870;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	27931387	27931486	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:27031801;1allele=A/C;version=Hapmap2;RS=rs278210314;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	28102544	28102643	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:27202445;1allele=G/A;version=Hapmap2;RS=rs812661776;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	28110105	28110204	.	+	.	Name=Leaf_width;B73v2_pos=7:27210009;1allele=T/C;version=Hapmap2;RS=rs130498130;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	28173193	28173292	.	+	.	Name=Tassel_length;B73v2_pos=7:27273709;1allele=C/T;version=Hapmap2;RS=rs130498232;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	28175300	28175399	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:27275816;1allele=C/T;version=Hapmap2;RS=rs278210654;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	28210838	28210937	.	+	.	Name=Tassel_length;B73v2_pos=7:27312119;1allele=G/A;version=Hapmap2;RS=rs809231303;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	28235696	28235795	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:27335864;1allele=C/T;version=Hapmap2;RS=rs130498340;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	28235696	28235795	.	+	.	Name=Fructose;B73v2_pos=7:27335864;1allele=C/T;version=Hapmap2;RS=rs130498340;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	28240228	28240327	.	+	.	Name=Fructose;B73v2_pos=7:27340395;1allele=A/T;version=Hapmap2;RS=rs278210757;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	28240283	28240382	.	+	.	Name=Fructose;B73v2_pos=7:27340450;1allele=G/A;version=Hapmap1;RS=rs131612583;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	28240283	28240382	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:27340450;1allele=G/A;version=Hapmap1;RS=rs131612583;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	28243625	28243724	.	+	.	Name=Total_amino_acids;B73v2_pos=7:27343792;1allele=A/T;version=Hapmap2;RS=rs1063128506;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	28244690	28244789	.	+	.	Name=Tassel_length;B73v2_pos=7:27344857;1allele=T/C;version=Hapmap2;RS=rs830353000;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	28308284	28308383	.	+	.	Name=Tassel_length;B73v2_pos=7:27417451;1allele=T/G;version=Hapmap2;RS=rs278210973;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	28495591	28495690	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:27605103;1allele=G/A;version=Hapmap2;RS=rs131612737;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	28626551	28626650	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:27734790;1allele=A/G;version=Hapmap2;RS=rs130499519;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	29386736	29386835	.	+	.	Name=Fructose;B73v2_pos=7:28400764;1allele=G/T;version=Hapmap2;RS=rs843572850;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	29389626	29389725	.	+	.	Name=Glucose;B73v2_pos=7:28403657;1allele=T/C;version=Hapmap2;RS=rs1062964148;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	29543374	29543473	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:28580495;1allele=T/A;version=Hapmap2;RS=rs806844982;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	29543374	29543473	.	+	.	Name=Fructose;B73v2_pos=7:28580495;1allele=T/A;version=Hapmap2;RS=rs806844982;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	29670434	29670533	.	+	.	Name=Glucose;B73v2_pos=7:28789999;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	29697522	29697621	.	+	.	Name=Tassel_length;B73v2_pos=7:28676800;1allele=A/G;version=Hapmap2;RS=rs842446863;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	30140908	30141007	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:29174540;1allele=A/T;version=Hapmap1;RS=rs131613443;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	30146543	30146642	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:29180175;1allele=G/A;version=Hapmap2;RS=rs1063915209;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	30185008	30185107	.	+	.	Name=Leaf_length;B73v2_pos=7:29218643;1allele=A/G;version=Hapmap2;RS=rs834053966;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	30232020	30232119	.	+	.	Name=Tassel_length;B73v2_pos=7:29265659;1allele=T/C;version=Hapmap2;RS=rs813608191;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	30349156	30349255	.	+	.	Name=Starch;B73v2_pos=7:29372235;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	30349791	30349890	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:29371600;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	30360636	30360735	.	+	.	Name=Total_amino_acids;B73v2_pos=7:29387205;1allele=T/C;version=Hapmap2;RS=rs831079700;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	30498439	30498538	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:29561265;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	30513216	30513315	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:29546622;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	30533936	30534035	.	+	.	Name=Stalk_strength;B73v2_pos=7:29525963;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	30614886	30614985	.	+	.	Name=Stalk_strength;B73v2_pos=7:29632855;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	30629006	30629105	.	+	.	Name=Stalk_strength;B73v2_pos=7:29646975;1allele=T/C;version=Hapmap2;RS=rs808893730;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	30704775	30704874	.	+	.	Name=Stalk_strength;B73v2_pos=7:29733491;1allele=C/T;version=Hapmap2;RS=rs810231094;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	30812631	30812730	.	+	.	Name=Tassel_length;B73v2_pos=7:29953347;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	30861160	30861259	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:29996745;1allele=G/A;version=Hapmap2;RS=rs278215643;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	31042656	31042755	.	+	.	Name=Glucose;B73v2_pos=7:30161997;1allele=C/T;version=Hapmap2;RS=rs278216030;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	31182330	31182429	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:30320714;1allele=T/C;version=Hapmap2;RS=rs821454899;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	31314920	31315019	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:30451974;1allele=C/T;version=Hapmap2;RS=rs849742244;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	31343742	31343841	.	+	.	Name=Glucose;B73v2_pos=7:30479132;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	31343742	31343841	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:30479132;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	31343742	31343841	.	+	.	Name=Fructose;B73v2_pos=7:30479132;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	31402083	31402182	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:30536079;1allele=C/T;version=Hapmap2;RS=rs803309529;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	31403974	31404073	.	+	.	Name=Fructose;B73v2_pos=7:30537970;1allele=G/A;version=Hapmap2;RS=rs130504028;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	31404045	31404144	.	+	.	Name=Fructose;B73v2_pos=7:30538041;1allele=C/G;version=Hapmap2;RS=rs278216562;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	31528872	31528971	.	+	.	Name=Glucose;B73v2_pos=7:30661735;1allele=G/A;version=Hapmap1;RS=rs131614050;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	31547273	31547372	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:30680135;1allele=T/C;version=Hapmap2;RS=rs130504219;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	31548882	31548981	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:30681744;1allele=A/G;version=Hapmap2;RS=rs832260819;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	31718505	31718604	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:30838425;1allele=G/T;version=Hapmap2;RS=rs726651190;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	31742169	31742268	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:30870300;1allele=G/A;version=Hapmap2;RS=rs829107752;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	31751277	31751376	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:30879348;1allele=A/G;version=Hapmap1;RS=rs131614106;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	31842020	31842119	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:30970988;1allele=C/T;version=Hapmap2;RS=rs826324802;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	31843597	31843696	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:30972565;1allele=A/G;version=Hapmap2;RS=rs832161575;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	31845492	31845591	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:30974460;1allele=T/C;version=Hapmap2;RS=rs816933917;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	31872488	31872587	.	+	.	Name=Days_to_silk;B73v2_pos=7:31000121;1allele=T/A;version=Hapmap1;RS=rs131614166;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	31872488	31872587	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:31000121;1allele=T/A;version=Hapmap1;RS=rs131614166;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	31876014	31876113	.	+	.	Name=Glucose;B73v2_pos=7:31003647;1allele=C/A;version=Hapmap2;RS=rs832176278;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	31896576	31896675	.	+	.	Name=Stalk_strength;B73v2_pos=7:31024194;1allele=C/T;version=Hapmap2;RS=rs802812816;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	31967938	31968037	.	+	.	Name=Ear_height;B73v2_pos=7:31088333;1allele=G/C;version=Hapmap2;RS=rs841096257;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	31989404	31989503	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:31141180;1allele=T/C;version=Hapmap2;RS=rs816311325;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	31995093	31995192	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:31146868;1allele=G/T;version=Hapmap2;RS=rs849697080;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	31995093	31995192	.	+	.	Name=Plant_height;B73v2_pos=7:31146868;1allele=G/T;version=Hapmap2;RS=rs849697080;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	31999807	31999906	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:31151582;1allele=G/T;version=Hapmap2;RS=rs1061710859;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	32106817	32106916	.	+	.	Name=Plant_height;B73v2_pos=7:31121793;1allele=C/G;version=Hapmap2;RS=rs823372609;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	32106869	32106968	.	+	.	Name=Plant_height;B73v2_pos=7:31121845;1allele=C/T;version=Hapmap2;RS=rs807753131;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	32126251	32126350	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:31240800;1allele=C/T;version=Hapmap2;RS=rs830869057;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	32127393	32127492	.	+	.	Name=Ear_height;B73v2_pos=7:31241942;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	32187820	32187919	.	+	.	Name=Plant_height;B73v2_pos=7:31302372;1allele=G/A;version=Hapmap2;RS=rs810558249;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	32187820	32187919	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:31302372;1allele=G/A;version=Hapmap2;RS=rs810558249;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	32403722	32403821	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:31517284;1allele=G/T;version=Hapmap2;RS=rs836265061;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	32403722	32403821	.	+	.	Name=Days_to_silk;B73v2_pos=7:31517284;1allele=G/T;version=Hapmap2;RS=rs836265061;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	32467337	32467436	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:31587866;1allele=A/G;version=Hapmap2;RS=rs833622393;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	32488303	32488402	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:31531624;1allele=A/T;version=Hapmap2;RS=rs816119370;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	32601676	32601775	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:31656853;1allele=G/A;version=Hapmap2;RS=rs813944649;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	32611505	32611604	.	+	.	Name=Ear_height;B73v2_pos=7:31666684;1allele=G/T;version=Hapmap2;RS=rs829430517;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	32646817	32646916	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:31702007;1allele=C/T;version=Hapmap2;RS=rs842880648;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	32668749	32668848	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:31723669;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	32721582	32721681	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:31777270;1allele=T/A;version=Hapmap2;RS=rs829620554;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	32872548	32872647	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:31926926;1allele=A/G;version=Hapmap2;RS=rs805130831;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	32886073	32886172	.	+	.	Name=Ear_height;B73v2_pos=7:31940451;1allele=C/T;version=Hapmap2;RS=rs841263688;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	32892672	32892771	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:31947050;1allele=A/C;version=Hapmap2;RS=rs826398182;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	32955221	32955320	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:32009609;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	33026769	33026868	.	+	.	Name=Ear_height;B73v2_pos=7:32082183;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	33059201	33059300	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:32114615;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	33241104	33241203	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:32297802;1allele=A/G;version=Hapmap2;RS=rs130506967;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	33241188	33241287	.	+	.	Name=Plant_height;B73v2_pos=7:32297886;1allele=G/T;version=Hapmap2;RS=rs843232122;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	33241263	33241362	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:32297961;1allele=T/C;version=Hapmap2;RS=rs817212984;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	33241427	33241526	.	+	.	Name=Ear_height;B73v2_pos=7:32298125;1allele=T/C;version=Hapmap2;RS=rs811897288;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	33243470	33243569	.	+	.	Name=Plant_height;B73v2_pos=7:32300170;1allele=A/G;version=Hapmap2;RS=rs838235848;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	33245877	33245976	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:32302577;1allele=A/G;version=Hapmap2;RS=rs830089988;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	33384028	33384127	.	+	.	Name=Plant_height;B73v2_pos=7:32430853;1allele=C/T;version=Hapmap2;RS=rs840410919;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	34017364	34017463	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:33052909;1allele=A/C;version=Hapmap2;RS=rs278220240;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	34017364	34017463	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:33052909;1allele=A/C;version=Hapmap2;RS=rs278220240;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	34021450	34021549	.	+	.	Name=Fructose;B73v2_pos=7:33056995;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	34061167	34061266	.	+	.	Name=Fructose;B73v2_pos=7:33096714;1allele=A/G;version=Hapmap2;RS=rs278220327;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	34194639	34194738	.	+	.	Name=Fructose;B73v2_pos=7:33227256;1allele=A/T;version=Hapmap2;RS=rs130508487;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	34398629	34398728	.	+	.	Name=Fructose;B73v2_pos=7:33432161;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	34409546	34409645	.	+	.	Name=Total_amino_acids;B73v2_pos=7:33436333;1allele=C/T;version=Hapmap2;RS=rs841701182;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	35426284	35426383	.	+	.	Name=Tassel_length;B73v2_pos=7:34433295;1allele=T/A;version=Hapmap2;RS=rs724685391;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	35482359	35482458	.	+	.	Name=Tassel_length;B73v2_pos=7:34482813;1allele=T/C;version=Hapmap2;RS=rs130510336;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	35645867	35645966	.	+	.	Name=Fructose;B73v2_pos=7:34652148;1allele=C/T;version=Hapmap2;RS=rs278222439;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	35645867	35645966	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:34652148;1allele=C/T;version=Hapmap2;RS=rs278222439;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	35661553	35661652	.	+	.	Name=Days_to_silk;B73v2_pos=4:42697405;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	35672296	35672395	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:34678606;1allele=C/T;version=Hapmap2;RS=rs805090408;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	35672296	35672395	.	+	.	Name=Fructose;B73v2_pos=7:34678606;1allele=C/T;version=Hapmap2;RS=rs805090408;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	36347538	36347637	.	+	.	Name=Tassel_length;B73v2_pos=7:35342480;1allele=G/C;version=Hapmap2;RS=rs278223105;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	37053678	37053777	.	+	.	Name=3:226449815;B73v2_pos=G/T;1allele=Hapmap2;version=chr7;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	37619981	37620080	.	+	.	Name=Glucose;B73v2_pos=7:36626096;1allele=A/G;version=Hapmap2;RS=rs130513255;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	37626185	37626284	.	+	.	Name=Glucose;B73v2_pos=7:36632300;1allele=C/T;version=Hapmap2;RS=rs130513286;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	37730254	37730353	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:36719804;1allele=A/G;version=Hapmap2;RS=rs803400133;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	38273650	38273749	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:37273570;1allele=A/C;version=Hapmap2;RS=rs814358211;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	38857798	38857897	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:37851517;1allele=C/A;version=Hapmap2;RS=rs830047704;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	38857798	38857897	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:37851517;1allele=C/A;version=Hapmap2;RS=rs830047704;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	38857798	38857897	.	+	.	Name=Days_to_silk;B73v2_pos=7:37851517;1allele=C/A;version=Hapmap2;RS=rs830047704;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	39690314	39690413	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:38659438;1allele=T/C;version=Hapmap2;RS=rs131617037;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	39735243	39735342	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:38715841;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	39787539	39787638	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:38737561;1allele=C/T;version=Hapmap2;RS=rs818131390;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	39856076	39856175	.	+	.	Name=Fructose;B73v2_pos=7:38802276;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	39951386	39951485	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:38899605;1allele=T/A;version=Hapmap2;RS=rs824858107;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	40095717	40095816	.	+	.	Name=Total_amino_acids;B73v2_pos=7:38991848;1allele=T/C;version=Hapmap2;RS=rs838654426;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	40105462	40105561	.	+	.	Name=Ear_height;B73v2_pos=7:39000479;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	40258747	40258846	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:39125250;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	40332471	40332570	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:39180040;1allele=A/G;version=Hapmap2;RS=rs130515408;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	40339795	40339894	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:39187365;1allele=A/T;version=Hapmap2;RS=rs130515481;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	40847766	40847865	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:39691152;1allele=G/A;version=Hapmap2;RS=rs827094621;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	41093647	41093746	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:39923998;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	41574722	41574821	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:40411883;1allele=A/T;version=Hapmap2;RS=rs831929688;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	42021404	42021503	.	+	.	Name=Starch;B73v2_pos=7:40859807;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	42186564	42186663	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:40999059;1allele=A/G;version=Hapmap2;RS=rs130519275;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	42251295	42251394	.	+	.	Name=Leaf_width;B73v2_pos=7:41054405;1allele=T/A;version=Hapmap2;RS=rs278232200;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	42303909	42304008	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:41127711;1allele=G/A;version=Hapmap2;RS=rs831406650;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	42593621	42593720	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:41399966;1allele=T/C;version=Hapmap2;RS=rs845093064;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	42610741	42610840	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:41416906;1allele=C/T;version=Hapmap2;RS=rs724348254;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	42676486	42676585	.	+	.	Name=Days_to_silk;B73v2_pos=7:41483281;1allele=G/C;version=Hapmap2;RS=rs839777350;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	42702708	42702807	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:41507744;1allele=G/A;version=Hapmap2;RS=rs829593283;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	44363097	44363196	.	+	.	Name=Leaf_width;B73v2_pos=7:43175163;1allele=T/G;version=Hapmap2;RS=rs725942887;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	45016389	45016488	.	+	.	Name=Total_amino_acids;B73v2_pos=7:43872922;1allele=A/G;version=Hapmap2;RS=rs278235887;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	45090964	45091063	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:179585442;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	45136576	45136675	.	+	.	Name=Total_amino_acids;B73v2_pos=7:43994169;1allele=C/T;version=Hapmap2;RS=rs811245662;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	45292579	45292678	.	+	.	Name=Starch;B73v2_pos=7:44154185;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	46703716	46703815	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:45578494;1allele=G/A;version=Hapmap2;RS=rs847480792;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	47691620	47691719	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:46552765;1allele=C/T;version=Hapmap2;RS=rs828983111;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	47816505	47816604	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:46683097;1allele=C/T;version=Hapmap2;RS=rs836974122;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	47822009	47822108	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:46688602;1allele=G/A;version=Hapmap2;RS=rs816548168;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	48173566	48173665	.	+	.	Name=Total_amino_acids;B73v2_pos=7:47016242;1allele=G/T;version=Hapmap2;RS=rs814323351;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	48204079	48204178	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:47046941;1allele=T/G;version=Hapmap2;RS=rs825532344;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	48206580	48206679	.	+	.	Name=Leaf_width;B73v2_pos=7:47049442;1allele=G/A;version=Hapmap2;RS=rs815847401;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	48546144	48546243	.	+	.	Name=Total_amino_acids;B73v2_pos=7:47384949;1allele=G/A;version=Hapmap2;RS=rs846601115;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	48782314	48782413	.	+	.	Name=Total_amino_acids;B73v2_pos=7:47546851;1allele=T/C;version=Hapmap2;RS=rs278245653;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	48820099	48820198	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:47658861;1allele=T/C;version=Hapmap2;RS=rs1063049389;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	48958638	48958737	.	+	.	Name=Starch;B73v2_pos=7:47748564;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	48959383	48959482	.	+	.	Name=Leaf_width;B73v2_pos=7:47747819;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	48984056	48984155	.	+	.	Name=Fructose;B73v2_pos=7:47811944;1allele=T/A;version=Hapmap2;RS=rs278246500;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	48984574	48984673	.	+	.	Name=Starch;B73v2_pos=7:47812462;1allele=G/A;version=Hapmap2;RS=rs278246515;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	48986363	48986462	.	+	.	Name=Starch;B73v2_pos=7:47814251;1allele=G/A;version=Hapmap2;RS=rs1062659528;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	48986852	48986951	.	+	.	Name=Starch;B73v2_pos=7:47814740;1allele=T/C;version=Hapmap2;RS=rs1062911660;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	49115920	49116019	.	+	.	Name=Starch;B73v2_pos=7:47936688;1allele=C/T;version=Hapmap2;RS=rs130531911;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	51931215	51931314	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64864888;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	52743241	52743340	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:51491808;1allele=G/A;version=Hapmap2;RS=rs849158759;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	52748732	52748831	.	+	.	Name=Leaf_width;B73v2_pos=7:51497301;1allele=A/G;version=Hapmap2;RS=rs817574605;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	52959625	52959724	.	+	.	Name=Glucose;B73v2_pos=7:51645489;1allele=G/A;version=Hapmap2;RS=rs130536288;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	53010635	53010734	.	+	.	Name=Starch;B73v2_pos=7:51696611;1allele=A/G;version=Hapmap2;RS=rs802857633;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	53113374	53113470	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:51797581;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	53351419	53351518	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:52034026;1allele=G/A;version=Hapmap2;RS=rs130537909;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	53386149	53386248	.	+	.	Name=Starch;B73v2_pos=7:52068759;1allele=G/C;version=Hapmap2;RS=rs820501039;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	53648601	53648700	.	+	.	Name=Leaf_width;B73v2_pos=7:52341693;1allele=T/C;version=Hapmap2;RS=rs130538998;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	53655666	53655765	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:52348758;1allele=C/A;version=Hapmap2;RS=rs821821566;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	53655754	53655853	.	+	.	Name=Leaf_length;B73v2_pos=7:52348846;1allele=C/A;version=Hapmap2;RS=rs822013495;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	53670786	53670885	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:52363891;1allele=G/A;version=Hapmap2;RS=rs827699451;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	53708993	53709092	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:52407493;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	54022012	54022111	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:52719149;1allele=G/A;version=Hapmap2;RS=rs810786165;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	56679398	56679497	.	+	.	Name=Nitrate;B73v2_pos=10:19651;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	69192320	69192419	.	+	.	Name=Leaf_width;B73v2_pos=7:64904467;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	71418677	71418776	.	+	.	Name=Leaf_width;B73v2_pos=7:62729401;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	71467428	71467527	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:62666610;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	72253627	72253726	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:68461241;1allele=C/T;version=Hapmap2;RS=rs803664634;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	75797827	75797926	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:71852460;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	75963529	75963628	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:71981965;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	77809262	77809361	.	+	.	Name=Days_to_silk;B73v2_pos=2:224021662;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	77809262	77809361	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:224021662;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	78050472	78050571	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52305237;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	79188208	79188307	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:75153426;1allele=T/C;version=Hapmap2;RS=rs809037493;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	79395046	79395145	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:75362642;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	80494773	80494872	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:76433098;1allele=T/C;version=Hapmap2;RS=rs130550157;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	81188417	81188516	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:77093062;1allele=C/T;version=Hapmap2;RS=rs835248144;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	82131188	82131287	.	+	.	Name=Stalk_strength;B73v2_pos=5:215422857;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	82576378	82576477	.	+	.	Name=Height_above_ear;B73v2_pos=7:78427058;1allele=A/C;version=Hapmap2;RS=rs840810802;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	82750813	82750912	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:78598215;1allele=C/T;version=Hapmap2;RS=rs825725617;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	82823402	82823501	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:78672568;1allele=A/G;version=Hapmap2;RS=rs278279119;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	83301170	83301269	.	+	.	Name=Total_amino_acids;B73v2_pos=7:79034768;1allele=G/A;version=Hapmap2;RS=rs130556210;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	83357462	83357561	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:79090955;1allele=C/T;version=Hapmap2;RS=rs839602513;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	83980562	83980661	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:79719466;1allele=G/A;version=Hapmap2;RS=rs850170849;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	84238899	84238998	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:79954341;1allele=G/A;version=Hapmap2;RS=rs806371489;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	84254395	84254494	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:79969844;1allele=G/A;version=Hapmap2;RS=rs825112881;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	84310572	84310671	.	+	.	Name=Total_amino_acids;B73v2_pos=7:80026029;1allele=A/G;version=Hapmap2;RS=rs131626396;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	86047205	86047304	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:81732488;1allele=A/G;version=Hapmap2;RS=rs824936244;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	86942542	86942641	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:82617260;1allele=A/G;version=Hapmap2;RS=rs278284965;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	86976423	86976522	.	+	.	Name=Days_to_silk;B73v2_pos=7:82651586;1allele=C/T;version=Hapmap2;RS=rs837948661;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	87617419	87617518	.	+	.	Name=Total_amino_acids;B73v2_pos=7:83273988;1allele=A/C;version=Hapmap2;RS=rs813895067;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	87780380	87780479	.	+	.	Name=Total_amino_acids;B73v2_pos=7:83438367;1allele=C/T;version=Hapmap2;RS=rs130559704;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	87821115	87821214	.	+	.	Name=Total_amino_acids;B73v2_pos=7:83471179;1allele=A/G;version=Hapmap2;RS=rs278285787;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	87873436	87873535	.	+	.	Name=Total_amino_acids;B73v2_pos=7:83522350;1allele=C/A;version=Hapmap2;RS=rs1060945690;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	87930423	87930522	.	+	.	Name=Days_to_silk;B73v2_pos=7:83579337;1allele=C/T;version=Hapmap2;RS=rs278285842;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	88498213	88498312	.	+	.	Name=Tassel_length;B73v2_pos=7:84185590;1allele=C/A;version=Hapmap2;RS=rs806511760;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	88498284	88498383	.	+	.	Name=Tassel_length;B73v2_pos=7:84185661;1allele=G/A;version=Hapmap2;RS=rs839902046;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	88581484	88581583	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:84266767;1allele=G/A;version=Hapmap2;RS=rs843162696;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	88660141	88660240	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:84345259;1allele=C/T;version=Hapmap2;RS=rs834097883;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	88897318	88897417	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:84578719;1allele=T/A;version=Hapmap2;RS=rs802649202;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	89763985	89764084	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:85504380;1allele=C/T;version=Hapmap2;RS=rs278290389;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	90049487	90049586	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:85791273;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	90075410	90075509	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:85815511;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	90131343	90131442	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:85870761;1allele=A/G;version=Hapmap2;RS=rs724952902;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	90248898	90248997	.	+	.	Name=Total_amino_acids;B73v2_pos=7:85985430;1allele=G/A;version=Hapmap2;RS=rs842652088;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	90284695	90284794	.	+	.	Name=Total_amino_acids;B73v2_pos=7:86021225;1allele=G/A;version=Hapmap2;RS=rs1064031300;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	90513571	90513670	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:86247439;1allele=T/C;version=Hapmap2;RS=rs829961499;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	90515068	90515167	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:86248936;1allele=C/T;version=Hapmap2;RS=rs823453297;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	90859870	90859969	.	+	.	Name=Leaf_width;B73v2_pos=7:86586100;1allele=C/T;version=Hapmap2;RS=rs278293384;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	91020840	91020939	.	+	.	Name=Plant_height;B73v2_pos=7:86748187;1allele=C/T;version=Hapmap2;RS=rs278293786;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	91458114	91458213	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:87136074;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	91738177	91738276	.	+	.	Name=Days_to_silk;B73v2_pos=8:28586707;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	91991342	91991441	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:111339602;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	92743851	92743950	.	+	.	Name=Days_to_silk;B73v2_pos=7:88351549;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	92873652	92873751	.	+	.	Name=Leaf_width;B73v2_pos=7:88509996;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	93415349	93415448	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:89041556;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	93757891	93757990	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:89380318;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	93913566	93913665	.	+	.	Name=Days_to_silk;B73v2_pos=7:89541715;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	94446967	94447066	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:90126429;1allele=G/T;version=Hapmap2;RS=rs839488468;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	95539954	95540053	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:91196994;1allele=C/T;version=Hapmap2;RS=rs1061837506;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	95717679	95717778	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:91362094;1allele=C/T;version=Hapmap2;RS=rs836587039;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	95736075	95736174	.	+	.	Name=Total_amino_acids;B73v2_pos=7:91380488;1allele=G/A;version=Hapmap2;RS=rs1063208824;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	96058923	96059022	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:91681819;1allele=+/-;version=Hapmap2;RS=rs278299897;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	96963099	96963198	.	+	.	Name=Fructose;B73v2_pos=7:93068969;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	97049599	97049698	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:92978871;1allele=C/T;version=Hapmap2;RS=rs278301855;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	97051687	97051786	.	+	.	Name=Glucose;B73v2_pos=7:92976783;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	97054541	97054640	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:92973929;1allele=T/C;version=Hapmap2;RS=rs831941759;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	97741934	97742033	.	+	.	Name=Days_to_silk;B73v2_pos=7:93288469;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	97937595	97937694	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:93464418;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	98016748	98016847	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:93541051;1allele=A/C;version=Hapmap2;RS=rs835187596;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	98297033	98297132	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:93745660;1allele=G/A;version=Hapmap2;RS=rs130569931;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	98303636	98303735	.	+	.	Name=Fructose;B73v2_pos=7:93752264;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	98536245	98536344	.	+	.	Name=Total_amino_acids;B73v2_pos=7:94012268;1allele=C/T;version=Hapmap2;RS=rs818544502;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	98536375	98536474	.	+	.	Name=Total_amino_acids;B73v2_pos=7:94012398;1allele=T/C;version=Hapmap2;RS=rs278303424;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	98537112	98537211	.	+	.	Name=Total_amino_acids;B73v2_pos=7:94013135;1allele=G/A;version=Hapmap2;RS=rs130570293;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	98538124	98538223	.	+	.	Name=Total_amino_acids;B73v2_pos=7:94014147;1allele=C/T;version=Hapmap2;RS=rs826307921;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	98541701	98541800	.	+	.	Name=Total_amino_acids;B73v2_pos=7:94017674;1allele=T/G;version=Hapmap2;RS=rs278303535;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	98543457	98543556	.	+	.	Name=Total_amino_acids;B73v2_pos=7:94019430;1allele=C/T;version=Hapmap2;RS=rs131630899;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	99449532	99449631	.	+	.	Name=Total_amino_acids;B73v2_pos=7:94963702;1allele=T/C;version=Hapmap2;RS=rs130571836;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	99559449	99559548	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:95068947;1allele=C/T;version=Hapmap2;RS=rs818356034;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	99611461	99611560	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:95120959;1allele=A/C;version=Hapmap2;RS=rs848552364;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	99912701	99912800	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:95420054;1allele=A/G;version=Hapmap2;RS=rs813266399;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	100143332	100143431	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:95639183;1allele=G/A;version=Hapmap2;RS=rs829014921;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	101693214	101693313	.	+	.	Name=Fructose;B73v2_pos=7:97170950;1allele=T/G;version=Hapmap2;RS=rs807466780;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	101939818	101939917	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:97420867;1allele=T/C;version=Hapmap2;RS=rs832759257;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	101978524	101978623	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:97459444;1allele=T/G;version=Hapmap2;RS=rs838152393;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	101985095	101985194	.	+	.	Name=Total_amino_acids;B73v2_pos=7:97466016;1allele=G/A;version=Hapmap2;RS=rs1060971124;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	101985720	101985819	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:97466641;1allele=C/T;version=Hapmap2;RS=rs819404581;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	102178910	102179009	.	+	.	Name=Fructose;B73v2_pos=7:97659799;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	102215602	102215701	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:97691863;1allele=A/G;version=Hapmap2;RS=rs847624015;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	102266973	102267072	.	+	.	Name=Total_amino_acids;B73v2_pos=7:97743374;1allele=G/A;version=Hapmap2;RS=rs131632299;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	102272414	102272513	.	+	.	Name=Plant_height;B73v2_pos=7:97749262;1allele=G/A;version=Hapmap2;RS=rs278312339;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	102274054	102274153	.	+	.	Name=Plant_height;B73v2_pos=7:97750902;1allele=A/G;version=Hapmap2;RS=rs130578229;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	102280531	102280630	.	+	.	Name=Plant_height;B73v2_pos=7:97757379;1allele=A/T;version=Hapmap2;RS=rs816433889;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	102284916	102285015	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:97761764;1allele=C/T;version=Hapmap2;RS=rs131632313;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	102285999	102286098	.	+	.	Name=Total_amino_acids;B73v2_pos=7:97762847;1allele=T/C;version=Hapmap2;RS=rs278312470;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	102533525	102533624	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:98005398;1allele=T/C;version=Hapmap2;RS=rs804738894;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	102983563	102983658	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:98416985;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	102984539	102984638	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:98417965;1allele=G/T;version=Hapmap2;RS=rs278313343;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	103132670	103132769	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:98563565;1allele=A/G;version=Hapmap2;RS=rs130587178;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	103139511	103139610	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:98570406;1allele=C/T;version=Hapmap2;RS=rs840852648;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	103239029	103239128	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:98665469;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	103428863	103428962	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:98843357;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	103500240	103500339	.	+	.	Name=Tassel_length;B73v2_pos=7:98921737;1allele=T/C;version=Hapmap2;RS=rs817323747;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	103558827	103558926	.	+	.	Name=Tassel_length;B73v2_pos=7:99023619;1allele=T/C;version=Hapmap2;RS=rs131634358;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	103590630	103590729	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:98933913;1allele=C/T;version=Hapmap2;RS=rs130587970;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	103619868	103619967	.	+	.	Name=Tassel_length;B73v2_pos=7:98958387;1allele=A/G;version=Hapmap2;RS=rs813912798;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	103625629	103625728	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:99035412;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	103649362	103649461	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:99059865;1allele=C/T;version=Hapmap1;RS=rs807807530;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	103893946	103894045	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:99306028;1allele=G/A;version=Hapmap2;RS=rs802989755;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	103985642	103985741	.	+	.	Name=Fructose;B73v2_pos=7:99391028;1allele=G/A;version=Hapmap2;RS=rs822568087;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	103988718	103988817	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:99394105;1allele=A/G;version=Hapmap2;RS=rs827336391;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	103989062	103989161	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:99394449;1allele=A/G;version=Hapmap2;RS=rs820212467;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	104047926	104048025	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:99453570;1allele=A/T;version=Hapmap2;RS=rs825632843;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	104138008	104138107	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:99540914;1allele=-/+;version=Hapmap2;RS=rs278314708;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	104141716	104141815	.	+	.	Name=Nitrate;B73v2_pos=7:99544622;1allele=A/G;version=Hapmap2;RS=rs830834882;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	104244848	104244947	.	+	.	Name=Total_amino_acids;B73v2_pos=7:99633556;1allele=C/T;version=Hapmap2;RS=rs818604011;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	104255592	104255691	.	+	.	Name=Total_amino_acids;B73v2_pos=7:99644300;1allele=G/C;version=Hapmap2;RS=rs131634678;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	104925912	104926011	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:198119368;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	105163569	105163668	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:100509848;1allele=C/A;version=Hapmap2;RS=rs847343797;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	105164860	105164959	.	+	.	Name=Fructose;B73v2_pos=7:100511133;1allele=G/A;version=Hapmap2;RS=rs809390334;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	105180246	105180345	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:100526518;1allele=G/A;version=Hapmap2;RS=rs816377438;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	105229345	105229444	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:100575271;1allele=G/A;version=Hapmap2;RS=rs823010811;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	105276814	105276913	.	+	.	Name=Height_above_ear;B73v2_pos=7:100622356;1allele=A/G;version=Hapmap2;RS=rs278316598;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	105475504	105475603	.	+	.	Name=Leaf_width;B73v2_pos=7:100840855;1allele=G/A;version=Hapmap2;RS=rs131635599;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	105510426	105510525	.	+	.	Name=Leaf_width;B73v2_pos=7:100877184;1allele=T/A;version=Hapmap2;RS=rs806016292;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	105512691	105512790	.	+	.	Name=Leaf_width;B73v2_pos=7:100879449;1allele=T/G;version=Hapmap2;RS=rs130591475;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	105512933	105513032	.	+	.	Name=Leaf_width;B73v2_pos=7:100879691;1allele=G/A;version=Hapmap2;RS=rs840240335;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	105512943	105513042	.	+	.	Name=Leaf_width;B73v2_pos=7:100879701;1allele=G/A;version=Hapmap2;RS=rs820435381;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	105838319	105838418	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:101193461;1allele=T/C;version=Hapmap2;RS=rs727161470;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	106380724	106380823	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:101743577;1allele=G/T;version=Hapmap2;RS=rs847140541;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	106593902	106594001	.	+	.	Name=Ear_height;B73v2_pos=7:101949671;1allele=C/A;version=Hapmap2;RS=rs726888076;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	106652228	106652327	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:102007990;1allele=A/T;version=Hapmap2;RS=rs130592927;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	106714487	106714586	.	+	.	Name=Total_amino_acids;B73v2_pos=7:102070391;1allele=T/G;version=Hapmap2;RS=rs843068788;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	106739481	106739580	.	+	.	Name=Total_amino_acids;B73v2_pos=7:102095386;1allele=G/A;version=Hapmap2;RS=rs805833325;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	106762130	106762229	.	+	.	Name=Total_amino_acids;B73v2_pos=7:102170238;1allele=A/G;version=Hapmap2;RS=rs278318359;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	106916526	106916625	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:102268432;1allele=C/T;version=Hapmap2;RS=rs847733383;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	107059624	107059723	.	+	.	Name=Days_to_silk;B73v2_pos=7:102410050;1allele=G/A;version=Hapmap1;RS=rs131636325;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	107063398	107063497	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:102413824;1allele=A/G;version=Hapmap2;RS=rs130593985;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	107206845	107206944	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:102508442;1allele=G/A;version=Hapmap2;RS=rs278318736;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	107834258	107834357	.	+	.	Name=Tassel_length;B73v2_pos=7:103170592;1allele=A/G;version=Hapmap2;RS=rs835064994;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	107934138	107934237	.	+	.	Name=Tassel_length;B73v2_pos=7:103276878;1allele=T/C;version=Hapmap2;RS=rs130596265;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	107964370	107964469	.	+	.	Name=Total_amino_acids;B73v2_pos=7:103307110;1allele=G/T;version=Hapmap1;RS=rs131636596;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	108105008	108105107	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:103438386;1allele=G/A;version=Hapmap2;RS=rs828727680;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	108335577	108335676	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:103663958;1allele=A/G;version=Hapmap2;RS=rs849969982;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	108582308	108582407	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:103903240;1allele=G/T;version=Hapmap2;RS=rs814550324;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	108638764	108638863	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:103959628;1allele=G/A;version=Hapmap2;RS=rs808790527;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	108644031	108644130	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:103964895;1allele=A/G;version=Hapmap2;RS=rs844508549;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	108645766	108645865	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:103966630;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	108673459	108673558	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:103994330;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	108682049	108682148	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:104003109;1allele=A/G;version=Hapmap2;RS=rs817686466;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	108689288	108689387	.	+	.	Name=Nitrate;B73v2_pos=7:104010347;1allele=C/T;version=Hapmap2;RS=rs847977445;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	108785498	108785597	.	+	.	Name=Nitrate;B73v2_pos=7:104106931;1allele=A/C;version=Hapmap2;RS=rs841393459;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	108814661	108814760	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:104177736;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	108970550	108970649	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:104288810;1allele=A/G;version=Hapmap2;RS=rs833242517;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	109310102	109310201	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:104625140;1allele=G/A;version=Hapmap2;RS=rs824926788;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	109367316	109367415	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:104683120;1allele=C/T;version=Hapmap2;RS=rs1061524062;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	109590702	109590801	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:104920259;1allele=C/A;version=Hapmap2;RS=rs839616713;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	109732123	109732222	.	+	.	Name=Tassel_length;B73v2_pos=7:105061426;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	109735843	109735942	.	+	.	Name=Leaf_width;B73v2_pos=7:105065137;1allele=T/C;version=Hapmap2;RS=rs130599613;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	109738915	109739014	.	+	.	Name=Tassel_length;B73v2_pos=7:105068209;1allele=T/A;version=Hapmap2;RS=rs278323988;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	109846753	109846852	.	+	.	Name=Leaf_width;B73v2_pos=7:105172714;1allele=C/G;version=Hapmap2;RS=rs130599788;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	109894416	109894515	.	+	.	Name=Leaf_width;B73v2_pos=7:105219194;1allele=T/A;version=Hapmap2;RS=rs130599901;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	109975480	109975579	.	+	.	Name=Tassel_length;B73v2_pos=7:105299860;1allele=C/T;version=Hapmap2;RS=rs130600249;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	110034639	110034738	.	+	.	Name=Tassel_length;B73v2_pos=7:105358923;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	110036029	110036128	.	+	.	Name=Tassel_length;B73v2_pos=7:105360313;1allele=G/A;version=Hapmap1;RS=rs130600418;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	110037983	110038082	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:105362630;1allele=T/G;version=Hapmap1;RS=rs130600430;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	110040096	110040195	.	+	.	Name=Leaf_width;B73v2_pos=7:105364743;1allele=A/G;version=Hapmap2;RS=rs278324386;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	110055424	110055523	.	+	.	Name=Tassel_length;B73v2_pos=7:105380237;1allele=C/T;version=Hapmap2;RS=rs824704303;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	110145467	110145566	.	+	.	Name=Tassel_length;B73v2_pos=7:105460907;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	110146412	110146511	.	+	.	Name=Tassel_length;B73v2_pos=7:105459962;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	110205603	110205702	.	+	.	Name=Nitrate;B73v2_pos=7:105529270;1allele=C/T;version=Hapmap2;RS=rs278325135;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	110238278	110238377	.	+	.	Name=Tassel_length;B73v2_pos=7:105561861;1allele=C/T;version=Hapmap2;RS=rs816804420;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	110298184	110298283	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:105621787;1allele=A/C;version=Hapmap2;RS=rs823794721;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	110299967	110300066	.	+	.	Name=Tassel_length;B73v2_pos=7:105623570;1allele=C/T;version=Hapmap2;RS=rs845785870;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	111003606	111003705	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:106324488;1allele=C/T;version=Hapmap2;RS=rs816654959;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	111232339	111232438	.	+	.	Name=Tassel_length;B73v2_pos=7:106548812;1allele=G/A;version=Hapmap2;RS=rs820181199;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	111341929	111342028	.	+	.	Name=Tassel_length;B73v2_pos=7:106656304;1allele=A/C;version=Hapmap2;RS=rs130603271;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	111491781	111491880	.	+	.	Name=Nitrate;B73v2_pos=7:106804505;1allele=G/A;version=Hapmap2;RS=rs831145115;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	112229533	112229632	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:107544673;1allele=T/G;version=Hapmap2;RS=rs1061413526;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	112345291	112345390	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:107666482;1allele=C/T;version=Hapmap2;RS=rs130604808;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	112349332	112349431	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:107670529;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	112501684	112501783	.	+	.	Name=Malate;B73v2_pos=7:107818985;1allele=T/C;version=Hapmap2;RS=rs809152220;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	112570707	112570806	.	+	.	Name=Sucrose;B73v2_pos=7:107862050;1allele=T/C;version=Hapmap2;RS=rs837229745;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	112623157	112623256	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:107922309;1allele=T/C;version=Hapmap2;RS=rs812471087;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	112727185	112727284	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:108011805;1allele=C/A;version=Hapmap2;RS=rs810324710;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	112756136	112756235	.	+	.	Name=Ear_height;B73v2_pos=7:108030756;1allele=C/T;version=Hapmap2;RS=rs841952337;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	112767238	112767337	.	+	.	Name=Nitrate;B73v2_pos=7:108051101;1allele=C/T;version=Hapmap2;RS=rs802550707;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	112845513	112845612	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:108299672;1allele=C/A;version=Hapmap2;RS=rs278331029;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	112850070	112850169	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:108304229;1allele=G/C;version=Hapmap2;RS=rs820999201;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	112931420	112931519	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:108382751;1allele=G/A;version=Hapmap2;RS=rs278331240;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	112933569	112933668	.	+	.	Name=Tassel_length;B73v2_pos=7:108384901;1allele=T/C;version=Hapmap2;RS=rs1061643989;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	113176323	113176422	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:108729737;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	113179151	113179250	.	+	.	Name=Sucrose;B73v2_pos=7:108726890;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	113180271	113180370	.	+	.	Name=Sucrose;B73v2_pos=7:108725770;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	113203990	113204089	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:108702054;1allele=+/-;version=Hapmap2;RS=rs816541752;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	113297072	113297171	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:108740073;1allele=A/T;version=Hapmap2;RS=rs804528002;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	113335364	113335463	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:108778266;1allele=C/A;version=Hapmap2;RS=rs837243274;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	113346851	113346950	.	+	.	Name=Tassel_length;B73v2_pos=7:108789754;1allele=C/G;version=Hapmap1;RS=rs813868168;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	113346871	113346970	.	+	.	Name=Tassel_length;B73v2_pos=7:108789774;1allele=C/T;version=Hapmap1;RS=rs132379980;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	113382730	113382829	.	+	.	Name=Tassel_length;B73v2_pos=7:108825639;1allele=C/T;version=Hapmap1;RS=rs132380022;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	113383843	113383942	.	+	.	Name=Tassel_length;B73v2_pos=7:108826752;1allele=C/A;version=Hapmap2;RS=rs802845984;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	113410799	113410898	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:108853711;1allele=T/C;version=Hapmap2;RS=rs801647980;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	113412513	113412612	.	+	.	Name=Tassel_length;B73v2_pos=7:108855425;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	113771468	113771567	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:109226575;1allele=G/A;version=Hapmap2;RS=rs1063936104;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	113950175	113950274	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:109331815;1allele=T/A;version=Hapmap2;RS=rs847583639;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	114105389	114105488	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:109538659;1allele=A/T;version=Hapmap2;RS=rs802457311;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	114493632	114493731	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:109922433;1allele=G/T;version=Hapmap2;RS=rs130607610;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	114507045	114507144	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:109936210;1allele=C/T;version=Hapmap2;RS=rs130607652;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	114559398	114559497	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:109985902;1allele=T/C;version=Hapmap2;RS=rs130607870;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	114927843	114927942	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:110362040;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	115384828	115384927	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:110774070;1allele=A/T;version=Hapmap2;RS=rs1061894557;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	115394326	115394425	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:110781361;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	115402210	115402309	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:110789245;1allele=G/C;version=Hapmap2;RS=rs846400568;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	115547637	115547736	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:110928615;1allele=T/C;version=Hapmap2;RS=rs815371528;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	115803695	115803794	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:111178300;1allele=T/C;version=Hapmap2;RS=rs831050328;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	115963405	115963504	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:111344569;1allele=T/C;version=Hapmap2;RS=rs804088738;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	115964028	115964127	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:111345192;1allele=T/A;version=Hapmap2;RS=rs848376469;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	116015900	116015999	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:111408581;1allele=A/G;version=Hapmap2;RS=rs846053332;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	116368903	116369002	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:111744680;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	116504126	116504225	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:111876536;1allele=C/T;version=Hapmap2;RS=rs812096039;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	116696018	116696117	.	+	.	Name=Sucrose;B73v2_pos=7:112069174;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	116852786	116852885	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:112215744;1allele=A/G;version=Hapmap2;RS=rs807907339;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	116997278	116997377	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:112320854;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	116997280	116997379	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:112320852;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	117042844	117042943	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:112404941;1allele=G/A;version=Hapmap2;RS=rs833728023;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	117277567	117277666	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:112636621;1allele=T/C;version=Hapmap2;RS=rs823990269;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	117435937	117436036	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:112789090;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	117517439	117517538	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:112878888;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	117578552	117578651	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:112938095;1allele=G/A;version=Hapmap2;RS=rs850516576;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	117578815	117578914	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:112938358;1allele=G/A;version=Hapmap2;RS=rs132381943;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	117600217	117600316	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:112959665;1allele=G/A;version=Hapmap2;RS=rs841450907;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	117612712	117612811	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:112972160;1allele=G/A;version=Hapmap2;RS=rs824057065;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	117901016	117901115	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:113248012;1allele=A/G;version=Hapmap2;RS=rs1063575198;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	118029937	118030036	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:113357452;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	118051314	118051413	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:113378832;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	118051314	118051413	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:113378832;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	118167573	118167672	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:113514678;1allele=C/T;version=Hapmap2;RS=rs812959529;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	118207904	118208003	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:113541273;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	118236101	118236200	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:113527484;1allele=C/T;version=Hapmap2;RS=rs812637120;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	118418419	118418518	.	+	.	Name=Cob_diameter;B73v2_pos=7:113705687;1allele=C/T;version=Hapmap1;RS=rs130613481;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	119167291	119167390	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:114535990;1allele=A/G;version=Hapmap2;RS=rs278338055;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	119172043	119172142	.	+	.	Name=Leaf_width;B73v2_pos=7:114540933;1allele=C/T;version=Hapmap2;RS=rs130614581;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	119349552	119349651	.	+	.	Name=Sucrose;B73v2_pos=7:114641892;1allele=A/C;version=Hapmap2;RS=rs1063521624;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	119456673	119456772	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:114749494;1allele=C/T;version=Hapmap2;RS=rs803331470;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	119511439	119511538	.	+	.	Name=Sucrose;B73v2_pos=7:114804712;1allele=A/G;version=Hapmap2;RS=rs278338722;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	119618034	119618133	.	+	.	Name=Sucrose;B73v2_pos=7:114907272;1allele=G/A;version=Hapmap2;RS=rs1061430054;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	119649279	119649378	.	+	.	Name=Starch;B73v2_pos=7:114938211;1allele=C/T;version=Hapmap1;RS=rs130615434;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	119759565	119759664	.	+	.	Name=Tassel_length;B73v2_pos=7:115036376;1allele=G/C;version=Hapmap2;RS=rs278339779;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	119759821	119759920	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:115036632;1allele=T/A;version=Hapmap2;RS=rs726524149;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	119783139	119783238	.	+	.	Name=Tassel_length;B73v2_pos=7:115060079;1allele=G/A;version=Hapmap2;RS=rs278339787;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	119808846	119808945	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:115085786;1allele=T/C;version=Hapmap2;RS=rs725599995;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	120018115	120018214	.	+	.	Name=Plant_height;B73v2_pos=7:115283348;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	120107047	120107146	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:115376820;1allele=G/T;version=Hapmap2;RS=rs808115188;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	120166347	120166446	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:115424015;1allele=A/G;version=Hapmap2;RS=rs840109777;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	120375872	120375971	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:115638742;1allele=A/G;version=Hapmap2;RS=rs817154636;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	120446902	120447001	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:115704457;1allele=T/G;version=Hapmap2;RS=rs132383137;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	120639907	120640006	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:115895679;1allele=T/C;version=Hapmap2;RS=rs816084987;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	120655084	120655183	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:115910863;1allele=C/T;version=Hapmap2;RS=rs843903668;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	120655138	120655237	.	+	.	Name=Tassel_length;B73v2_pos=7:115910917;1allele=C/T;version=Hapmap2;RS=rs827440435;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	121101135	121101234	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:116376811;1allele=G/A;version=Hapmap2;RS=rs278341910;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	121106024	121106123	.	+	.	Name=Starch;B73v2_pos=7:116381700;1allele=G/A;version=Hapmap2;RS=rs132383538;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	121423706	121423805	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:116724558;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	121431220	121431319	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:116717044;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	121494671	121494770	.	+	.	Name=Tassel_length;B73v2_pos=7:116766947;1allele=G/A;version=Hapmap2;RS=rs833444291;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	122493873	122493972	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:117345245;1allele=T/C;version=Hapmap2;RS=rs827159581;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	122513580	122513679	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:117363627;1allele=C/T;version=Hapmap2;RS=rs841747549;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	122515526	122515625	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:117365573;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	122606365	122606464	.	+	.	Name=Leaf_width;B73v2_pos=7:117447072;1allele=C/A;version=Hapmap2;RS=rs132384106;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	122692337	122692436	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:117529153;1allele=A/-;version=Hapmap1;RS=rs132384226;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	122708932	122709031	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:117545748;1allele=C/A;version=Hapmap2;RS=rs812020888;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	122716835	122716934	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:117553651;1allele=C/G;version=Hapmap2;RS=rs278343920;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	122852993	122853092	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:117697981;1allele=C/T;version=Hapmap2;RS=rs278344226;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	122858116	122858215	.	+	.	Name=Tassel_length;B73v2_pos=7:117703104;1allele=G/C;version=Hapmap2;RS=rs724850799;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	122888589	122888688	.	+	.	Name=Tassel_length;B73v2_pos=7:117733008;1allele=A/G;version=Hapmap2;RS=rs130617927;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	123259911	123260010	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:118092415;1allele=G/C;version=Hapmap2;RS=rs1063694414;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	123329470	123329569	.	+	.	Name=Glutamate;B73v2_pos=7:118166784;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	123351477	123351576	.	+	.	Name=Glutamate;B73v2_pos=7:118190187;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	123406446	123406545	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:118249024;1allele=T/C;version=Hapmap2;RS=rs803410504;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	123468371	123468470	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:118306861;1allele=T/G;version=Hapmap2;RS=rs132384789;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	123468853	123468952	.	+	.	Name=Sucrose;B73v2_pos=7:118307343;1allele=T/C;version=Hapmap2;RS=rs1060919434;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	123468870	123468969	.	+	.	Name=Sucrose;B73v2_pos=7:118307360;1allele=T/C;version=Hapmap2;RS=rs278345769;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	123469062	123469161	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:118307552;1allele=C/G;version=Hapmap2;RS=rs132384814;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	123473395	123473494	.	+	.	Name=Cob_diameter;B73v2_pos=7:118311884;1allele=G/T;version=Hapmap2;RS=rs130618778;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	123684160	123684259	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:118516118;1allele=C/T;version=Hapmap2;RS=rs130619064;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	123684498	123684597	.	+	.	Name=Sucrose;B73v2_pos=7:118516456;1allele=G/T;version=Hapmap2;RS=rs278345969;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	123684509	123684608	.	+	.	Name=Sucrose;B73v2_pos=7:118516467;1allele=C/T;version=Hapmap2;RS=rs130619074;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	123719279	123719378	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:118550634;1allele=C/T;version=Hapmap2;RS=rs846579105;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	123747895	123747994	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:118580509;1allele=C/T;version=Hapmap1;RS=rs132385171;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	123860323	123860422	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:118683457;1allele=T/C;version=Hapmap2;RS=rs842735507;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	123880136	123880235	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:118703270;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	123895886	123895985	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:118720157;1allele=A/G;version=Hapmap2;RS=rs847689427;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	124077422	124077521	.	+	.	Name=Height_above_ear;B73v2_pos=7:118910984;1allele=T/A;version=Hapmap2;RS=rs130619961;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	124212075	124212174	.	+	.	Name=Sucrose;B73v2_pos=7:119058064;1allele=C/T;version=Hapmap2;RS=rs726971439;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	124225830	124225929	.	+	.	Name=Sucrose;B73v2_pos=7:119071529;1allele=G/A;version=Hapmap2;RS=rs1063972506;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	124312377	124312476	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:119153986;1allele=C/T;version=Hapmap2;RS=rs844688647;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	124323267	124323366	.	+	.	Name=Sucrose;B73v2_pos=7:119164877;1allele=T/C;version=Hapmap2;RS=rs850106858;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	124324692	124324791	.	+	.	Name=Tassel_length;B73v2_pos=7:119166302;1allele=A/T;version=Hapmap2;RS=rs840793518;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	124325198	124325297	.	+	.	Name=Tassel_length;B73v2_pos=7:119166808;1allele=C/G;version=Hapmap2;RS=rs810562429;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	124326523	124326622	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:119168133;1allele=A/G;version=Hapmap2;RS=rs808168851;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	124428893	124428992	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:119266930;1allele=A/G;version=Hapmap2;RS=rs822067814;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	124703423	124703522	.	+	.	Name=Glutamate;B73v2_pos=7:119521386;1allele=C/T;version=Hapmap2;RS=rs823387139;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	124725442	124725541	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:119639932;1allele=A/G;version=Hapmap2;RS=rs803708542;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	125308671	125308770	.	+	.	Name=Leaf_width;B73v2_pos=7:120085069;1allele=A/G;version=Hapmap2;RS=rs804288214;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	125308876	125308975	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:120085274;1allele=C/A;version=Hapmap2;RS=rs848798396;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	125309116	125309215	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:120085514;1allele=C/T;version=Hapmap2;RS=rs727189554;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	125335056	125335155	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:120111455;1allele=T/C;version=Hapmap2;RS=rs130620857;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	125401806	125401905	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:120175410;1allele=C/T;version=Hapmap2;RS=rs130620902;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	125529485	125529584	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:120308330;1allele=G/A;version=Hapmap2;RS=rs815696276;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	125565444	125565543	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:120340021;1allele=C/T;version=Hapmap2;RS=rs809035644;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	125578616	125578715	.	+	.	Name=Ear_row_number;B73v2_pos=7:120353194;1allele=C/G;version=Hapmap2;RS=rs807247056;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	125877621	125877720	.	+	.	Name=Starch;B73v2_pos=7:120659967;1allele=G/T;version=Hapmap2;RS=rs278348712;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	125928950	125929049	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:120712368;1allele=G/A;version=Hapmap2;RS=rs131180927;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	126077423	126077522	.	+	.	Name=Cob_diameter;B73v2_pos=7:120724080;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	126206670	126206769	.	+	.	Name=Cob_diameter;B73v2_pos=7:120852796;1allele=T/C;version=Hapmap2;RS=rs818333810;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	126227490	126227589	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:120873617;1allele=A/G;version=Hapmap2;RS=rs821942066;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	126356783	126356881	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:120998331;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	126534291	126534390	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121174208;1allele=A/G;version=Hapmap2;RS=rs845239418;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	126535911	126536010	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121175835;1allele=C/A;version=Hapmap2;RS=rs850204393;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	126541918	126542017	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121181782;1allele=G/A;version=Hapmap2;RS=rs812564220;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	126542703	126542802	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121182567;1allele=G/C;version=Hapmap2;RS=rs847904448;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	126545568	126545667	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121185432;1allele=A/G;version=Hapmap2;RS=rs826427354;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	126549154	126549253	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121189018;1allele=C/G;version=Hapmap2;RS=rs130622229;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	126549745	126549844	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:121189609;1allele=C/T;version=Hapmap2;RS=rs814418421;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	126551025	126551124	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:121190889;1allele=T/A;version=Hapmap1;RS=rs132386585;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	126551454	126551553	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121191318;1allele=G/T;version=Hapmap2;RS=rs819522625;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	126552042	126552141	.	+	.	Name=Fructose;B73v2_pos=7:121191906;1allele=/AGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	126578940	126579039	.	+	.	Name=Ear_row_number;B73v2_pos=7:121222979;1allele=G/A;version=Hapmap1;RS=rs132386732;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	126598441	126598540	.	+	.	Name=Tassel_length;B73v2_pos=7:121241563;1allele=G/A;version=Hapmap2;RS=rs278349716;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	126622032	126622131	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:121265152;1allele=A/G;version=Hapmap2;RS=rs1064700107;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	126709177	126709276	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:121353343;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	126751275	126751374	.	+	.	Name=Starch;B73v2_pos=7:121395189;1allele=T/C;version=Hapmap2;RS=rs130622678;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	126902459	126902558	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:121544646;1allele=A/G;version=Hapmap2;RS=rs278350223;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	126937392	126937491	.	+	.	Name=Ear_row_number;B73v2_pos=7:121579579;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	127106408	127106507	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121817163;1allele=-/A;version=Hapmap1;RS=rs132387547;2ref_allele=G;3alt_allele=GTAC
chr7	Wallace_2014	SNP	127106444	127106543	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121817127;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	127106577	127106676	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121816994;1allele=/AA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	127107008	127107107	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:121816563;1allele=T/G;version=Hapmap1;RS=rs132387531;2ref_allele=TA;3alt_allele=T
chr7	Wallace_2014	SNP	127108824	127108923	.	+	.	Name=Height_above_ear;B73v2_pos=7:121814747;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	127281153	127281252	.	+	.	Name=Cob_diameter;B73v2_pos=7:121979019;1allele=C/T;version=Hapmap2;RS=rs842277238;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	127368021	127368120	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:122066487;1allele=C/T;version=Hapmap2;RS=rs132387776;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	127368078	127368177	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:122066544;1allele=A/G;version=Hapmap2;RS=rs278350666;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	127368394	127368493	.	+	.	Name=Sucrose;B73v2_pos=7:122066860;1allele=A/G;version=Hapmap2;RS=rs278350672;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	127371705	127371804	.	+	.	Name=Sucrose;B73v2_pos=7:122070171;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	127377490	127377589	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:122075402;1allele=C/T;version=Hapmap2;RS=rs823747568;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	127379145	127379244	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:122077057;1allele=C/T;version=Hapmap2;RS=rs132387930;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	127468538	127468637	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:122159887;1allele=G/A;version=Hapmap2;RS=rs847645104;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	127481175	127481274	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:122172525;1allele=G/A;version=Hapmap2;RS=rs132387965;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	127742555	127742654	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:122435147;1allele=C/T;version=Hapmap1;RS=rs132388085;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	128018737	128018836	.	+	.	Name=Tassel_length;B73v2_pos=7:122697684;1allele=A/G;version=Hapmap2;RS=rs278351526;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	128024858	128024957	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:122703805;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	128029976	128030075	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:122708923;1allele=G/A;version=Hapmap2;RS=rs836514373;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	128031495	128031594	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:122710442;1allele=/ACA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	128835595	128835694	.	+	.	Name=Ear_row_number;B73v2_pos=7:123483757;1allele=G/A;version=Hapmap2;RS=rs278352630;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	128835913	128836012	.	+	.	Name=Ear_row_number;B73v2_pos=7:123484075;1allele=T/C;version=Hapmap2;RS=rs846368983;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	128836237	128836336	.	+	.	Name=Ear_row_number;B73v2_pos=7:123484399;1allele=G/T;version=Hapmap2;RS=rs1060635919;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	128858915	128859014	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:123507028;1allele=A/G;version=Hapmap2;RS=rs132388833;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	128974011	128974110	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:123587846;1allele=G/A;version=Hapmap2;RS=rs833256467;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	129027669	129027768	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:123641546;1allele=A/T;version=Hapmap2;RS=rs824138311;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	129069490	129069589	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:123683367;1allele=A/T;version=Hapmap2;RS=rs840712557;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	129079955	129080054	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:123693832;1allele=C/A;version=Hapmap2;RS=rs848609405;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	129115204	129115303	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:123729081;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	129142116	129142215	.	+	.	Name=Ear_row_number;B73v2_pos=7:123755014;1allele=G/A;version=Hapmap2;RS=rs278353192;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	129290142	129290241	.	+	.	Name=Ear_row_number;B73v2_pos=7:123910618;1allele=C/T;version=Hapmap1;RS=rs132389492;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	129536921	129537020	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:124119017;1allele=A/G;version=Hapmap2;RS=rs831310010;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	129536943	129537042	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:124119039;1allele=G/T;version=Hapmap2;RS=rs829802124;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	129542676	129542775	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:124123876;1allele=G/A;version=Hapmap2;RS=rs839867777;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	129562108	129562207	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:124135485;1allele=T/C;version=Hapmap2;RS=rs806501768;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	129567656	129567755	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:124141033;1allele=C/T;version=Hapmap2;RS=rs844729600;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	129583939	129584038	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:124157314;1allele=A/G;version=Hapmap2;RS=rs805341531;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	129800814	129800913	.	+	.	Name=Cob_diameter;B73v2_pos=7:124379272;1allele=G/C;version=Hapmap2;RS=rs278354236;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	130129468	130129567	.	+	.	Name=Ear_row_number;B73v2_pos=7:124699708;1allele=/TG;version=Hapmap1;RS=rs833297904;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	130159055	130159154	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:124729397;1allele=T/C;version=Hapmap2;RS=rs130627181;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	130371961	130372060	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:124927258;1allele=G/C;version=Hapmap2;RS=rs844693417;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	130391062	130391161	.	+	.	Name=Sucrose;B73v2_pos=7:124946497;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	130391125	130391224	.	+	.	Name=Ear_row_number;B73v2_pos=7:124946560;1allele=C/T;version=Hapmap2;RS=rs803672885;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	130391577	130391676	.	+	.	Name=Days_to_silk;B73v2_pos=7:124947012;1allele=G/A;version=Hapmap2;RS=rs130627506;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	130391577	130391676	.	+	.	Name=Ear_row_number;B73v2_pos=7:124947012;1allele=G/A;version=Hapmap2;RS=rs130627506;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	130494088	130494187	.	+	.	Name=Ear_row_number;B73v2_pos=7:125047938;1allele=T/G;version=Hapmap2;RS=rs812513028;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	130548442	130548541	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:125104307;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	130579722	130579821	.	+	.	Name=Sucrose;B73v2_pos=7:125135549;1allele=A/G;version=Hapmap2;RS=rs802902758;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	130599716	130599815	.	+	.	Name=Ear_row_number;B73v2_pos=7:125155546;1allele=C/T;version=Hapmap2;RS=rs820972445;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	130614976	130615075	.	+	.	Name=Ear_row_number;B73v2_pos=7:125169439;1allele=A/G;version=Hapmap2;RS=rs813433602;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	130626079	130626178	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:125180545;1allele=C/T;version=Hapmap2;RS=rs813435593;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	130824591	130824690	.	+	.	Name=Nitrate;B73v2_pos=7:125295865;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	130824694	130824793	.	+	.	Name=Sucrose;B73v2_pos=7:125295968;1allele=A/C;version=Hapmap2;RS=rs278355137;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	130845688	130845787	.	+	.	Name=Nitrate;B73v2_pos=7:125323867;1allele=G/T;version=Hapmap2;RS=rs821211500;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	130849486	130849585	.	+	.	Name=Nitrate;B73v2_pos=7:125348004;1allele=A/T;version=Hapmap2;RS=rs278355283;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	130859112	130859211	.	+	.	Name=Leaf_length;B73v2_pos=7:125357630;1allele=A/G;version=Hapmap2;RS=rs132390763;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	130885609	130885708	.	+	.	Name=Leaf_width;B73v2_pos=7:125384086;1allele=T/A;version=Hapmap2;RS=rs130627918;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	130900650	130900749	.	+	.	Name=Tassel_length;B73v2_pos=7:125399131;1allele=C/T;version=Hapmap2;RS=rs821888707;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	130901081	130901180	.	+	.	Name=Ear_row_number;B73v2_pos=7:125399562;1allele=T/C;version=Hapmap2;RS=rs807240885;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	130901278	130901377	.	+	.	Name=Leaf_length;B73v2_pos=7:125399759;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	130906145	130906244	.	+	.	Name=Ear_row_number;B73v2_pos=7:125404626;1allele=T/C;version=Hapmap1;RS=rs132390833;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	130915721	130915820	.	+	.	Name=Sucrose;B73v2_pos=7:125414202;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	130917691	130917790	.	+	.	Name=Tassel_length;B73v2_pos=7:125416172;1allele=G/A;version=Hapmap2;RS=rs806193521;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	130919444	130919543	.	+	.	Name=Leaf_width;B73v2_pos=7:125417925;1allele=A/C;version=Hapmap2;RS=rs820278715;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	131151871	131151970	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:125834072;1allele=G/A;version=Hapmap2;RS=rs808063149;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131152936	131153035	.	+	.	Name=Sucrose;B73v2_pos=7:125835137;1allele=G/C;version=Hapmap2;RS=rs132390883;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	131153688	131153787	.	+	.	Name=Sucrose;B73v2_pos=7:125835889;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	131213487	131213586	.	+	.	Name=Sucrose;B73v2_pos=7:125895711;1allele=C/T;version=Hapmap2;RS=rs831840693;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	131292909	131293008	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:125968274;1allele=G/A;version=Hapmap2;RS=rs811718888;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131293297	131293396	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:125968662;1allele=C/T;version=Hapmap2;RS=rs835279652;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	131300572	131300671	.	+	.	Name=Starch;B73v2_pos=7:125975937;1allele=A/G;version=Hapmap1;RS=rs130628407;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	131300758	131300857	.	+	.	Name=Cob_diameter;B73v2_pos=7:125976123;1allele=A/C;version=Hapmap1;RS=rs130628409;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	131300907	131301006	.	+	.	Name=Cob_diameter;B73v2_pos=7:125976272;1allele=A/G;version=Hapmap1;RS=rs132391137;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	131300915	131301014	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:125976280;1allele=C/G;version=Hapmap2;RS=rs278355924;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	131300920	131301019	.	+	.	Name=Cob_diameter;B73v2_pos=7:125976285;1allele=C/T;version=Hapmap2;RS=rs130628411;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	131430409	131430508	.	+	.	Name=Leaf_width;B73v2_pos=7:126104671;1allele=C/T;version=Hapmap2;RS=rs832997847;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	131430544	131430643	.	+	.	Name=Leaf_width;B73v2_pos=7:126104806;1allele=C/T;version=Hapmap2;RS=rs726053659;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	131431317	131431416	.	+	.	Name=Ear_row_number;B73v2_pos=7:126105579;1allele=A/G;version=Hapmap2;RS=rs130628525;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	131447610	131447709	.	+	.	Name=Days_to_silk;B73v2_pos=7:126121873;1allele=T/C;version=Hapmap2;RS=rs831140082;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	131459118	131459217	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:126133381;1allele=A/G;version=Hapmap2;RS=rs817729432;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	131471379	131471478	.	+	.	Name=Tassel_length;B73v2_pos=7:126145642;1allele=G/A;version=Hapmap2;RS=rs842205600;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131471662	131471759	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:126145925;1allele=G/T;version=Hapmap2;RS=rs814510389;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	131480323	131480422	.	+	.	Name=Tassel_length;B73v2_pos=7:126154588;1allele=C/T;version=Hapmap2;RS=rs816608517;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	131489026	131489125	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:126163291;1allele=G/A;version=Hapmap2;RS=rs130628682;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131568701	131568800	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126243153;1allele=T/G;version=Hapmap2;RS=rs834643480;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	131588300	131588399	.	+	.	Name=Sucrose;B73v2_pos=7:126262760;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	131589992	131590091	.	+	.	Name=Sucrose;B73v2_pos=7:126264452;1allele=C/T;version=Hapmap2;RS=rs1060506626;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	131596083	131596182	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126270544;1allele=T/G;version=Hapmap2;RS=rs824032942;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	131598395	131598494	.	+	.	Name=Sucrose;B73v2_pos=7:126278217;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	131608662	131608761	.	+	.	Name=Sucrose;B73v2_pos=7:126283648;1allele=A/C;version=Hapmap2;RS=rs130628845;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	131620280	131620379	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126295266;1allele=C/A;version=Hapmap2;RS=rs820597191;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	131667555	131667654	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126340590;1allele=G/A;version=Hapmap2;RS=rs836287711;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131672974	131673073	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126346017;1allele=G/A;version=Hapmap2;RS=rs837133522;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131676374	131676473	.	+	.	Name=Ear_row_number;B73v2_pos=7:126349417;1allele=T/A;version=Hapmap2;RS=rs837280659;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	131689813	131689912	.	+	.	Name=Tassel_length;B73v2_pos=7:126362860;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	131692723	131692822	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126365942;1allele=G/A;version=Hapmap2;RS=rs841810313;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131773950	131774049	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126447073;1allele=G/A;version=Hapmap1;RS=rs132391635;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	131774278	131774377	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126447401;1allele=A/T;version=Hapmap2;RS=rs813465070;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	131798464	131798563	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126471360;1allele=A/C;version=Hapmap2;RS=rs831459304;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	131818186	131818285	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:126491297;1allele=C/T;version=Hapmap2;RS=rs827497296;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	131844911	131845010	.	+	.	Name=Leaf_width;B73v2_pos=7:126517923;1allele=G/A;version=Hapmap2;RS=rs822453944;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	131852150	131852249	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:126525161;1allele=T/A;version=Hapmap2;RS=rs808826786;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	131853162	131853261	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:126526173;1allele=T/A;version=Hapmap2;RS=rs837501022;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	132098770	132098869	.	+	.	Name=Days_to_silk;B73v2_pos=7:126776364;1allele=C/T;version=Hapmap2;RS=rs846202780;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	132104125	132104224	.	+	.	Name=Starch;B73v2_pos=7:126781719;1allele=A/C;version=Hapmap2;RS=rs278357286;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	132147920	132148019	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:126827437;1allele=A/G;version=Hapmap2;RS=rs278357364;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	132220603	132220702	.	+	.	Name=Leaf_width;B73v2_pos=7:126908515;1allele=T/C;version=Hapmap2;RS=rs278357490;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	132240646	132240745	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:126926711;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	132356891	132356990	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:127033836;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	132374814	132374913	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:127069702;1allele=C/T;version=Hapmap2;RS=rs1064174716;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	132376972	132377071	.	+	.	Name=Ear_row_number;B73v2_pos=7:127071860;1allele=A/G;version=Hapmap2;RS=rs1062013982;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	132456964	132457063	.	+	.	Name=Ear_row_number;B73v2_pos=7:127144386;1allele=C/T;version=Hapmap2;RS=rs826617530;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	132567939	132568038	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:127253949;1allele=A/G;version=Hapmap2;RS=rs130630420;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	132635823	132635922	.	+	.	Name=Sucrose;B73v2_pos=7:127321778;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	132635913	132636012	.	+	.	Name=Sucrose;B73v2_pos=7:127321868;1allele=A/G;version=Hapmap2;RS=rs130630512;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	132639633	132639732	.	+	.	Name=Sucrose;B73v2_pos=7:127325588;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	132640662	132640761	.	+	.	Name=Days_to_silk;B73v2_pos=7:127326617;1allele=G/A;version=Hapmap2;RS=rs1063812704;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	132644767	132644866	.	+	.	Name=Sucrose;B73v2_pos=7:127330722;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	132644997	132645096	.	+	.	Name=Sucrose;B73v2_pos=7:127330953;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	132742853	132742952	.	+	.	Name=Sucrose;B73v2_pos=7:127428400;1allele=G/A;version=Hapmap2;RS=rs130630611;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	132754984	132755083	.	+	.	Name=Sucrose;B73v2_pos=7:127440533;1allele=A/G;version=Hapmap2;RS=rs278358014;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	132763991	132764090	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:127449528;1allele=T/C;version=Hapmap2;RS=rs130630735;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	132851099	132851198	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:127535497;1allele=C/T;version=Hapmap2;RS=rs837810510;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	132853098	132853197	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:127537503;1allele=T/C;version=Hapmap2;RS=rs810340938;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	132886329	132886428	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:127559860;1allele=T/G;version=Hapmap2;RS=rs838085906;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	132887782	132887881	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:127561313;1allele=G/A;version=Hapmap2;RS=rs842420323;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	132903008	132903107	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:127568346;1allele=G/A;version=Hapmap2;RS=rs810217862;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	132932801	132932900	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:127598138;1allele=G/A;version=Hapmap2;RS=rs840041473;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	133047097	133047196	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:127724693;1allele=G/A;version=Hapmap2;RS=rs130631184;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	133193577	133193676	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:127864885;1allele=A/G;version=Hapmap2;RS=rs130631321;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	133202643	133202742	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:127873957;1allele=G/C;version=Hapmap2;RS=rs726187786;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	133203079	133203178	.	+	.	Name=Height_above_ear;B73v2_pos=7:127874393;1allele=G/C;version=Hapmap2;RS=rs814259467;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	133317060	133317159	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:127971441;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	133453772	133453871	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:128018977;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	133754317	133754416	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:128313536;1allele=C/T;version=Hapmap2;RS=rs843088924;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	133774508	133774607	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:128333728;1allele=G/A;version=Hapmap2;RS=rs130631784;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	133817779	133817878	.	+	.	Name=Days_to_silk;B73v2_pos=7:128380010;1allele=G/A;version=Hapmap2;RS=rs808527926;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	133873832	133873931	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:128435584;1allele=G/A;version=Hapmap2;RS=rs838388664;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	134229007	134229106	.	+	.	Name=Plant_height;B73v2_pos=7:128788535;1allele=G/C;version=Hapmap2;RS=rs813063155;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	134252270	134252369	.	+	.	Name=Ear_height;B73v2_pos=7:128811799;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	134260567	134260666	.	+	.	Name=Ear_height;B73v2_pos=7:128820097;1allele=C/T;version=Hapmap2;RS=rs834976095;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	134763158	134763257	.	+	.	Name=Cob_diameter;B73v2_pos=7:129310337;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	134763255	134763354	.	+	.	Name=Cob_diameter;B73v2_pos=7:129310240;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	134775185	134775284	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:129298310;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	134921314	134921413	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:129453465;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135077106	135077205	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:129714852;1allele=A/G;version=Hapmap2;RS=rs847266461;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	135277014	135277113	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:129932283;1allele=G/A;version=Hapmap2;RS=rs850223092;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	135408237	135408336	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:130078715;1allele=T/C;version=Hapmap2;RS=rs847830176;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	135458205	135458304	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:130131971;1allele=C/G;version=Hapmap2;RS=rs830868927;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	135459187	135459286	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:130132953;1allele=/CAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135459475	135459574	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:130133241;1allele=C/T;version=Hapmap1;RS=rs278360788;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	135459476	135459575	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:130133242;1allele=G/C;version=Hapmap1;RS=rs132395469;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	135459759	135459858	.	+	.	Name=Tassel_length;B73v2_pos=7:130133525;1allele=T/C;version=Hapmap1;RS=rs132395481;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	135460147	135460246	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:130133913;1allele=G/A;version=Hapmap2;RS=rs824609997;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	135555347	135555446	.	+	.	Name=Tassel_length;B73v2_pos=7:130230902;1allele=A/T;version=Hapmap2;RS=rs829322312;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	135557108	135557207	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:130232663;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135557865	135557964	.	+	.	Name=Days_to_silk;B73v2_pos=7:130233420;1allele=/CCAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135572354	135572453	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:130247909;1allele=-/+;version=Hapmap2;RS=rs846554882;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	135686962	135687061	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:130336188;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135699915	135700014	.	+	.	Name=Days_to_silk;B73v2_pos=7:130323234;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135710167	135710266	.	+	.	Name=Tassel_length;B73v2_pos=7:130312981;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135803263	135803362	.	+	.	Name=Tassel_length;B73v2_pos=7:130494569;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135845338	135845437	.	+	.	Name=Tassel_length;B73v2_pos=7:130517102;1allele=A/T;version=Hapmap2;RS=rs841935246;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	135854201	135854300	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:130525965;1allele=G/A;version=Hapmap1;RS=rs132396182;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	135890376	135890475	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:33371583;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	135958764	135958863	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:130637725;1allele=C/A;version=Hapmap2;RS=rs821563110;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	136035845	136035944	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:130704787;1allele=C/G;version=Hapmap2;RS=rs278361648;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	136037151	136037250	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:130706093;1allele=C/A;version=Hapmap2;RS=rs278361664;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	136038672	136038771	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:130707614;1allele=T/A;version=Hapmap1;RS=rs132396306;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136205284	136205383	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:130872906;1allele=/CTG;version=Hapmap1;RS=rs830060729;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	136208850	136208949	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:130876472;1allele=C/T;version=Hapmap2;RS=rs827429358;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	136211686	136211785	.	+	.	Name=Ear_height;B73v2_pos=7:130879308;1allele=/TTT;version=Hapmap1;RS=rs278361873;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136257061	136257160	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:130929591;1allele=T/C;version=Hapmap2;RS=rs802903176;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136302615	136302714	.	+	.	Name=Fumarate;B73v2_pos=7:130972250;1allele=T/C;version=Hapmap2;RS=rs835524552;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136377088	136377187	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:131036697;1allele=C/T;version=Hapmap2;RS=rs130635069;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	136382038	136382137	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:131041648;1allele=G/T;version=Hapmap2;RS=rs278362256;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	136412000	136412099	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:131073287;1allele=T/C;version=Hapmap2;RS=rs839158451;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136451148	136451247	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:131110098;1allele=G/A;version=Hapmap2;RS=rs130635150;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	136527730	136527829	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:131187339;1allele=G/A;version=Hapmap2;RS=rs810074478;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	136536126	136536225	.	+	.	Name=Ear_height;B73v2_pos=7:131195731;1allele=G/C;version=Hapmap1;RS=rs132397397;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	136541025	136541124	.	+	.	Name=Ear_height;B73v2_pos=7:131200630;1allele=T/C;version=Hapmap2;RS=rs836643296;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136603939	136604038	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:131263375;1allele=C/T;version=Hapmap2;RS=rs816119131;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	136604108	136604207	.	+	.	Name=Ear_height;B73v2_pos=7:131263544;1allele=C/T;version=Hapmap2;RS=rs130635414;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	136604288	136604387	.	+	.	Name=Ear_height;B73v2_pos=7:131263724;1allele=T/A;version=Hapmap2;RS=rs278362567;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	136604493	136604592	.	+	.	Name=Ear_height;B73v2_pos=7:131263929;1allele=T/C;version=Hapmap2;RS=rs130635418;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136616448	136616547	.	+	.	Name=Ear_height;B73v2_pos=7:131275885;1allele=A/C;version=Hapmap2;RS=rs811227607;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	136695334	136695433	.	+	.	Name=Ear_height;B73v2_pos=7:131380336;1allele=T/C;version=Hapmap2;RS=rs843894118;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	136711579	136711678	.	+	.	Name=Ear_height;B73v2_pos=7:131396581;1allele=G/T;version=Hapmap2;RS=rs846694550;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	136711632	136711731	.	+	.	Name=Plant_height;B73v2_pos=7:131396634;1allele=T/C;version=Hapmap2;RS=rs840833491;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	137161679	137161778	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:131791389;1allele=C/T;version=Hapmap2;RS=rs1063736017;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	137205254	137205353	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:131826466;1allele=G/A;version=Hapmap2;RS=rs832683350;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	137422198	137422297	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:132075580;1allele=A/C;version=Hapmap2;RS=rs832958204;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	137423690	137423789	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:132077072;1allele=ACG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	137423717	137423816	.	+	.	Name=Ear_height;B73v2_pos=7:132077099;1allele=GC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	137509344	137509443	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:132160528;1allele=C/T;version=Hapmap2;RS=rs726957607;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	137663742	137663841	.	+	.	Name=Starch;B73v2_pos=7:132314809;1allele=G/A;version=Hapmap2;RS=rs820876362;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	137747852	137747951	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:132391561;1allele=G/T;version=Hapmap2;RS=rs831956586;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	137748169	137748268	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:132391878;1allele=G/A;version=Hapmap2;RS=rs837570505;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	137840186	137840285	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:132487365;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	137874931	137875030	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:132514652;1allele=C/A;version=Hapmap2;RS=rs807833105;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	138048358	138048457	.	+	.	Name=Tassel_length;B73v2_pos=7:132687563;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	138138303	138138402	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:132777857;1allele=G/A;version=Hapmap2;RS=rs836175795;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	138252800	138252899	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:132889571;1allele=C/T;version=Hapmap2;RS=rs130637569;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	138252836	138252935	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:132889607;1allele=T/A;version=Hapmap2;RS=rs130637570;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	138394288	138394387	.	+	.	Name=Tassel_length;B73v2_pos=7:133030895;1allele=A/T;version=Hapmap2;RS=rs278365364;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	138397353	138397452	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:133033961;1allele=G/A;version=Hapmap2;RS=rs808469781;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	138424204	138424303	.	+	.	Name=Tassel_length;B73v2_pos=7:133054441;1allele=C/A;version=Hapmap2;RS=rs811869596;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	138446980	138447079	.	+	.	Name=Tassel_length;B73v2_pos=7:133075976;1allele=C/A;version=Hapmap1;RS=rs132399156;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	138513309	138513408	.	+	.	Name=Tassel_length;B73v2_pos=7:133142796;1allele=C/G;version=Hapmap2;RS=rs813922958;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	138529769	138529868	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:133159256;1allele=T/C;version=Hapmap2;RS=rs132399278;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	138548881	138548980	.	+	.	Name=Ear_height;B73v2_pos=7:133178367;1allele=G/A;version=Hapmap2;RS=rs278365612;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	138647785	138647884	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:133274556;1allele=T/A;version=Hapmap2;RS=rs278365669;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	138706091	138706190	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:133326529;1allele=T/C;version=Hapmap2;RS=rs278365752;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	138718177	138718276	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:133338616;1allele=T/C;version=Hapmap2;RS=rs815941501;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	138753739	138753838	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:133374178;1allele=C/T;version=Hapmap1;RS=rs725217082;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	138780291	138780390	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:133400223;1allele=T/C;version=Hapmap2;RS=rs132399578;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	138801904	138802003	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:133421836;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	138810313	138810412	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:133432165;1allele=C/T;version=Hapmap2;RS=rs802144390;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	138843197	138843296	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:133480389;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	139037422	139037521	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:133654365;1allele=A/C;version=Hapmap2;RS=rs809108098;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	139198496	139198595	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:260821724;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	139252586	139252685	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:133864630;1allele=A/G;version=Hapmap2;RS=rs841160226;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139255407	139255506	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:133867451;1allele=G/T;version=Hapmap2;RS=rs842711306;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	139263551	139263650	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:133875595;1allele=G/A;version=Hapmap2;RS=rs822342686;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	139278611	139278710	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:133894055;1allele=A/G;version=Hapmap2;RS=rs833198592;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139281847	139281946	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:133897291;1allele=G/A;version=Hapmap2;RS=rs726702328;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	139296888	139296987	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:133912345;1allele=A/G;version=Hapmap2;RS=rs831431844;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139323239	139323338	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:133938930;1allele=A/G;version=Hapmap2;RS=rs802060449;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139326463	139326562	.	+	.	Name=Chlorophyll_A;B73v2_pos=7:133942154;1allele=A/G;version=Hapmap2;RS=rs841949785;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139333523	139333622	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:133949214;1allele=A/G;version=Hapmap2;RS=rs832249435;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139389379	139389478	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:134013020;1allele=T/C;version=Hapmap2;RS=rs727033282;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	139440543	139440642	.	+	.	Name=Ear_height;B73v2_pos=7:134050210;1allele=G/A;version=Hapmap2;RS=rs830222954;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139468075	139468174	.	+	.	Name=Ear_height;B73v2_pos=7:134076841;1allele=A/G;version=Hapmap2;RS=rs818113928;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139468450	139468549	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:134077216;1allele=G/T;version=Hapmap1;RS=rs132400215;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	139468576	139468675	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:134077342;1allele=A/G;version=Hapmap2;RS=rs807490144;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139488514	139488613	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:134097280;1allele=C/T;version=Hapmap2;RS=rs278366665;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	139524843	139524942	.	+	.	Name=Height_above_ear;B73v2_pos=7:134133509;1allele=A/C;version=Hapmap2;RS=rs278366774;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	139525207	139525306	.	+	.	Name=Height_above_ear;B73v2_pos=7:134133873;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	139530963	139531062	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:134139629;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	139537375	139537474	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:134146042;1allele=T/C;version=Hapmap2;RS=rs278366846;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	139537490	139537589	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:134146157;1allele=G/A;version=Hapmap2;RS=rs824573598;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	139572018	139572117	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:134180672;1allele=A/T;version=Hapmap2;RS=rs819346775;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	139611196	139611295	.	+	.	Name=Height_above_ear;B73v2_pos=7:134219852;1allele=G/A;version=Hapmap2;RS=rs832581431;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	139619046	139619145	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:134227702;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	139620368	139620467	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:134229024;1allele=A/G;version=Hapmap2;RS=rs130639175;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	139647556	139647655	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:134256220;1allele=T/C;version=Hapmap2;RS=rs837948805;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	139670270	139670369	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:134278935;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	140100373	140100472	.	+	.	Name=Ear_height;B73v2_pos=7:134700787;1allele=A/C;version=Hapmap1;RS=rs727283935;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	140123141	140123240	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:134723553;1allele=C/T;version=Hapmap2;RS=rs817152896;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	140203605	140203704	.	+	.	Name=Ear_height;B73v2_pos=7:134842415;1allele=A/G;version=Hapmap2;RS=rs806295847;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	140286648	140286747	.	+	.	Name=Tassel_length;B73v2_pos=7:134878504;1allele=A/T;version=Hapmap2;RS=rs278367445;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	140290880	140290979	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:134882736;1allele=A/G;version=Hapmap2;RS=rs278367457;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	140291861	140291960	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:134883717;1allele=T/C;version=Hapmap2;RS=rs725561586;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	140477020	140477119	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:135007454;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	140587669	140587768	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:135161497;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	140621058	140621157	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:135194910;1allele=G/A;version=Hapmap1;RS=rs132401010;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	141483073	141483172	.	+	.	Name=Ear_height;B73v2_pos=7:137794868;1allele=T/G;version=Hapmap2;RS=rs130642788;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	141543652	141543751	.	+	.	Name=Tassel_length;B73v2_pos=7:137735491;1allele=A/C;version=Hapmap2;RS=rs802404860;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	141543824	141543923	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:137735319;1allele=A/C;version=Hapmap2;RS=rs1062465939;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	141547880	141547979	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:137731263;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141574880	141574979	.	+	.	Name=Height_above_ear;B73v2_pos=7:137706200;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141574882	141574981	.	+	.	Name=Height_above_ear;B73v2_pos=7:137706198;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141578316	141578415	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:137702764;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141582301	141582400	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:137698779;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141586179	141586278	.	+	.	Name=Height_above_ear;B73v2_pos=7:137694899;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141587475	141587574	.	+	.	Name=Height_above_ear;B73v2_pos=7:137693603;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141588778	141588877	.	+	.	Name=Plant_height;B73v2_pos=7:137692300;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141588778	141588877	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:137692300;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141676673	141676772	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:137612055;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141730984	141731083	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:137557732;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141739459	141739558	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:137548818;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141739459	141739558	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:137548818;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141739459	141739558	.	+	.	Name=Plant_height;B73v2_pos=7:137548818;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141770570	141770669	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:137519012;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141826960	141827059	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:137462831;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141832970	141833069	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:137456822;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141953988	141954087	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:137335777;1allele=C/T;version=Hapmap2;RS=rs815222217;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	141974023	141974122	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:137318740;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141974025	141974124	.	+	.	Name=Height_above_ear;B73v2_pos=7:137318738;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	141974696	141974795	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:137318067;1allele=G/A;version=Hapmap2;RS=rs278370775;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	141974701	141974800	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:137318062;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142009447	142009546	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:137283838;1allele=A/G;version=Hapmap2;RS=rs816222479;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	142013151	142013250	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:137280134;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142015163	142015262	.	+	.	Name=Ear_height;B73v2_pos=7:137278122;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142015951	142016050	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:137277334;1allele=-/A;version=Hapmap1;RS=rs840009268;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	142054576	142054675	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:137165569;1allele=G/A;version=Hapmap2;RS=rs803609804;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	142095259	142095358	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:137192689;1allele=C/T;version=Hapmap1;RS=rs824467117;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	142121924	142122023	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:137219358;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142363894	142363993	.	+	.	Name=Plant_height;B73v2_pos=7:136960958;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142374920	142375018	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:136941486;1allele=C/T;version=Hapmap2;RS=rs830074615;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	142420627	142420726	.	+	.	Name=Plant_height;B73v2_pos=7:136870495;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142463728	142463827	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:136820634;1allele=T/A;version=Hapmap2;RS=rs278369820;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	142488986	142489085	.	+	.	Name=Ear_height;B73v2_pos=7:136846154;1allele=A/G;version=Hapmap2;RS=rs132402509;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	142498928	142499027	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:136798768;1allele=A/G;version=Hapmap2;RS=rs725660228;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	142499045	142499144	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:136798885;1allele=T/A;version=Hapmap2;RS=rs843066094;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	142499050	142499149	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:136798890;1allele=A/G;version=Hapmap2;RS=rs821872144;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	142549501	142549600	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:136748400;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142812176	142812275	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:136423839;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142847079	142847178	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:136394101;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142868607	142868706	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:136371854;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142873295	142873394	.	+	.	Name=Tassel_length;B73v2_pos=7:136367166;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142912703	142912802	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:136329079;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142950180	142950279	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:136286357;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	142982679	142982778	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:136253850;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143097293	143097392	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:136150088;1allele=/AC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143098415	143098514	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:136148966;1allele=C/T;version=Hapmap2;RS=rs278368675;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	143311178	143311277	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:135907263;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143410476	143410575	.	+	.	Name=Total_amino_acids;B73v2_pos=7:135811665;1allele=/AT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143540812	143540911	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:135699314;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143675673	143675772	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:135583155;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143734649	143734748	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:135511500;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143735482	143735581	.	+	.	Name=Tassel_length;B73v2_pos=7:135512333;1allele=C/A;version=Hapmap2;RS=rs845263703;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	143778489	143778588	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:135592195;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	143972587	143972686	.	+	.	Name=Leaf_width;B73v2_pos=7:125750506;1allele=G/A;version=Hapmap2;RS=rs805953062;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	144065873	144065972	.	+	.	Name=Tassel_length;B73v2_pos=7:125629353;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	144158801	144158900	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:125576426;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	144158901	144159000	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:125576326;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	144158969	144159068	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:125576258;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	144357119	144357218	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:138371267;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	144364548	144364647	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:138378695;1allele=G/T;version=Hapmap2;RS=rs833419127;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	144533233	144533332	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:138560286;1allele=C/G;version=Hapmap2;RS=rs803736835;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	144699717	144699816	.	+	.	Name=Ear_row_number;B73v2_pos=7:138735718;1allele=C/T;version=Hapmap2;RS=rs830417211;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	144716474	144716573	.	+	.	Name=Ear_height;B73v2_pos=7:138752475;1allele=G/A;version=Hapmap2;RS=rs836242354;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	144717636	144717735	.	+	.	Name=Ear_height;B73v2_pos=7:138753637;1allele=A/G;version=Hapmap2;RS=rs804204440;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	144857414	144857513	.	+	.	Name=Ear_height;B73v2_pos=7:138890930;1allele=A/G;version=Hapmap2;RS=rs130644577;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	144859002	144859101	.	+	.	Name=Ear_height;B73v2_pos=7:138892518;1allele=A/T;version=Hapmap2;RS=rs130644589;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	144862421	144862520	.	+	.	Name=Ear_height;B73v2_pos=7:138895937;1allele=T/C;version=Hapmap2;RS=rs130644602;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	144865686	144865785	.	+	.	Name=Malate;B73v2_pos=7:138899202;1allele=A/G;version=Hapmap2;RS=rs846116344;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	145003956	145004055	.	+	.	Name=Glutamate;B73v2_pos=7:139007204;1allele=T/C;version=Hapmap2;RS=rs824299081;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	145128705	145128804	.	+	.	Name=Ear_height;B73v2_pos=7:139152599;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	145304458	145304557	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:139330629;1allele=C/T;version=Hapmap2;RS=rs844317521;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	145305531	145305630	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:139331701;1allele=A/G;version=Hapmap2;RS=rs132404567;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	145686429	145686528	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:139704347;1allele=G/A;version=Hapmap2;RS=rs836170674;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	145751206	145751305	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:139727021;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	146011951	146012050	.	+	.	Name=Tassel_length;B73v2_pos=7:140010367;1allele=C/T;version=Hapmap2;RS=rs844344626;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	146043820	146043919	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:140149573;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	146245326	146245425	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:140251058;1allele=A/G;version=Hapmap2;RS=rs832940900;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	146249587	146249686	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:140255201;1allele=T/C;version=Hapmap2;RS=rs809340532;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	146354993	146355092	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:140399487;1allele=C/A;version=Hapmap2;RS=rs812760654;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	146366094	146366193	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:140410588;1allele=G/A;version=Hapmap2;RS=rs278373220;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	146528257	146528356	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:140571376;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	146650629	146650728	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:140689235;1allele=G/A;version=Hapmap2;RS=rs130646275;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	146980262	146980361	.	+	.	Name=Ear_height;B73v2_pos=7:141001120;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	147192187	147192286	.	+	.	Name=Ear_height;B73v2_pos=7:141080293;1allele=T/A;version=Hapmap2;RS=rs812678145;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	147258555	147258654	.	+	.	Name=Plant_height;B73v2_pos=7:141134657;1allele=A/G;version=Hapmap2;RS=rs820610428;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	147473224	147473323	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:141338505;1allele=A/C;version=Hapmap2;RS=rs802397801;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	147629717	147629816	.	+	.	Name=Ear_height;B73v2_pos=7:141491593;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	147632181	147632280	.	+	.	Name=Ear_height;B73v2_pos=7:141494057;1allele=A/T;version=Hapmap2;RS=rs818042513;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	147718229	147718328	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:141579302;1allele=G/C;version=Hapmap1;RS=rs869476237;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	147733021	147733120	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:141595164;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	147734099	147734198	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:141605792;1allele=A/C;version=Hapmap2;RS=rs130647501;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	147774432	147774531	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:141638651;1allele=G/T;version=Hapmap2;RS=rs130647526;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	147789453	147789552	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:141653672;1allele=T/G;version=Hapmap2;RS=rs820098691;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	147790589	147790688	.	+	.	Name=Ear_height;B73v2_pos=7:141654808;1allele=C/A;version=Hapmap2;RS=rs130647662;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	147795592	147795691	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:141659811;1allele=C/T;version=Hapmap2;RS=rs130647697;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	147796924	147797023	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:141661143;1allele=T/A;version=Hapmap2;RS=rs130647723;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	147840857	147840956	.	+	.	Name=Leaf_length;B73v2_pos=7:141722744;1allele=C/T;version=Hapmap2;RS=rs841840053;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	147868777	147868876	.	+	.	Name=Height_above_ear;B73v2_pos=7:141694819;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	147869995	147870094	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:141693601;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	147870325	147870424	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:141693271;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	147881419	147881507	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:141682249;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	147928686	147928785	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:141790681;1allele=G/C;version=Hapmap2;RS=rs844555491;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	147928762	147928861	.	+	.	Name=Ear_height;B73v2_pos=7:141790757;1allele=G/A;version=Hapmap2;RS=rs130648028;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	147946229	147946328	.	+	.	Name=Plant_height;B73v2_pos=7:141808224;1allele=G/A;version=Hapmap2;RS=rs278375278;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	147946229	147946328	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:141808224;1allele=G/A;version=Hapmap2;RS=rs278375278;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	147964099	147964198	.	+	.	Name=Ear_height;B73v2_pos=7:141826093;1allele=G/A;version=Hapmap2;RS=rs278375322;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	148003613	148003712	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:141865609;1allele=A/G;version=Hapmap2;RS=rs840912485;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	148020611	148020710	.	+	.	Name=Ear_height;B73v2_pos=7:141882609;1allele=G/T;version=Hapmap2;RS=rs130648274;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	148022933	148023032	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:141884931;1allele=T/G;version=Hapmap2;RS=rs840876336;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	148023922	148024021	.	+	.	Name=Plant_height;B73v2_pos=7:141885920;1allele=C/T;version=Hapmap2;RS=rs827082281;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	148029162	148029261	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:141891160;1allele=A/G;version=Hapmap2;RS=rs807826301;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	148029324	148029423	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:141891322;1allele=A/T;version=Hapmap2;RS=rs132406918;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	148029553	148029652	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:141891551;1allele=T/C;version=Hapmap2;RS=rs130648320;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	148031751	148031850	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:141893749;1allele=G/A;version=Hapmap1;RS=rs132406923;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	148038259	148038358	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:141900257;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148038259	148038358	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:141900257;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148038259	148038358	.	+	.	Name=Plant_height;B73v2_pos=7:141900257;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148038259	148038358	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:141900257;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148042476	148042575	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:141904474;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148043091	148043190	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:141905089;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148078344	148078443	.	+	.	Name=Height_above_ear;B73v2_pos=7:141940311;1allele=G/T;version=Hapmap2;RS=rs130648432;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	148119288	148119387	.	+	.	Name=Ear_height;B73v2_pos=7:141981192;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148175318	148175417	.	+	.	Name=Height_above_ear;B73v2_pos=7:142033398;1allele=T/C;version=Hapmap2;RS=rs819366873;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	148175625	148175724	.	+	.	Name=Height_above_ear;B73v2_pos=7:142033705;1allele=T/G;version=Hapmap2;RS=rs130648562;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	148249820	148249919	.	+	.	Name=Ear_height;B73v2_pos=7:142108631;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148260828	148260927	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:142087123;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148365882	148365981	.	+	.	Name=Ear_height;B73v2_pos=7:142226688;1allele=C/T;version=Hapmap2;RS=rs278375980;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	148400820	148400919	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:142261394;1allele=G/A;version=Hapmap2;RS=rs818110429;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	148602537	148602636	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:142446920;1allele=A/T;version=Hapmap2;RS=rs809640596;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	148666493	148666592	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:142513565;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148679267	148679366	.	+	.	Name=Days_to_silk;B73v2_pos=7:142526340;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148730771	148730870	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:142571965;1allele=A/G;version=Hapmap2;RS=rs818762519;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	148838504	148838603	.	+	.	Name=Ear_height;B73v2_pos=7:142678428;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148937832	148937931	.	+	.	Name=Ear_height;B73v2_pos=7:142776163;1allele=G/C;version=Hapmap2;RS=rs278376940;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	148944504	148944603	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:142782826;1allele=G/T;version=Hapmap2;RS=rs132407569;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	148945517	148945616	.	+	.	Name=Nitrate;B73v2_pos=7:142783839;1allele=C/A;version=Hapmap2;RS=rs837067792;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	148961345	148961444	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:142800137;1allele=T/C;version=Hapmap2;RS=rs1061975894;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	148977233	148977332	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:142816048;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	148977381	148977480	.	+	.	Name=Height_above_ear;B73v2_pos=7:142816196;1allele=G/C;version=Hapmap2;RS=rs130649412;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	148977671	148977770	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:142816486;1allele=A/T;version=Hapmap2;RS=rs132407638;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	149016199	149016298	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=7:142855018;1allele=A/T;version=Hapmap2;RS=rs835430440;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	149066445	149066544	.	+	.	Name=Starch;B73v2_pos=7:142905525;1allele=T/C;version=Hapmap1;RS=rs132407839;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	149069748	149069847	.	+	.	Name=Leaf_length;B73v2_pos=7:142908828;1allele=T/A;version=Hapmap2;RS=rs839767680;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	149123921	149124020	.	+	.	Name=Leaf_length;B73v2_pos=7:142963007;1allele=T/A;version=Hapmap2;RS=rs813276484;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	149128858	149128957	.	+	.	Name=Ear_height;B73v2_pos=7:142967944;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149128874	149128973	.	+	.	Name=Plant_height;B73v2_pos=7:142967960;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149128874	149128973	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:142967960;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149129338	149129437	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:142968424;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149133876	149133975	.	+	.	Name=Leaf_length;B73v2_pos=7:142972962;1allele=C/T;version=Hapmap2;RS=rs823738503;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	149157687	149157786	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:142997161;1allele=G/A;version=Hapmap2;RS=rs818999298;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	149159187	149159286	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:142998661;1allele=T/A;version=Hapmap2;RS=rs130649596;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	149160238	149160337	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:142999712;1allele=T/C;version=Hapmap2;RS=rs829231258;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	149162868	149162967	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:143002342;1allele=C/A;version=Hapmap2;RS=rs132407941;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	149180786	149180885	.	+	.	Name=Leaf_length;B73v2_pos=7:143020260;1allele=/AAA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149181176	149181275	.	+	.	Name=Leaf_length;B73v2_pos=7:143020650;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149185108	149185207	.	+	.	Name=Malate;B73v2_pos=7:143024582;1allele=/CTGCAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149196434	149196533	.	+	.	Name=Total_amino_acids;B73v2_pos=7:143035886;1allele=G/A;version=Hapmap2;RS=rs823707263;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	149558467	149558566	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:143409445;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149567091	149567190	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:143418069;1allele=A/C;version=Hapmap2;RS=rs822438425;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	149567104	149567203	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:143418082;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149568040	149568139	.	+	.	Name=Days_to_silk;B73v2_pos=7:143419018;1allele=C/G;version=Hapmap2;RS=rs840964782;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	149643416	149643515	.	+	.	Name=Height_above_ear;B73v2_pos=7:143496351;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	149668146	149668245	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:143521087;1allele=T/A;version=Hapmap2;RS=rs830904072;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	149668243	149668342	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:143521184;1allele=C/A;version=Hapmap2;RS=rs828399517;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	149680909	149681008	.	+	.	Name=Height_above_ear;B73v2_pos=7:143533857;1allele=T/C;version=Hapmap2;RS=rs832096521;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	149910588	149910687	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:143751889;1allele=G/C;version=Hapmap2;RS=rs845689639;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	149968431	149968530	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:143819371;1allele=G/A;version=Hapmap2;RS=rs817945548;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	149976595	149976694	.	+	.	Name=Height_above_ear;B73v2_pos=7:143827535;1allele=C/T;version=Hapmap2;RS=rs726857093;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	149976613	149976712	.	+	.	Name=Height_above_ear;B73v2_pos=7:143827553;1allele=G/A;version=Hapmap2;RS=rs278377845;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	149983446	149983545	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:143834386;1allele=G/C;version=Hapmap2;RS=rs1062944196;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	150023391	150023490	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:143878996;1allele=A/G;version=Hapmap2;RS=rs130650702;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	150095338	150095437	.	+	.	Name=Total_amino_acids;B73v2_pos=7:143956973;1allele=/ACG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	150118027	150118126	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:143979648;1allele=C/G;version=Hapmap2;RS=rs130650835;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	150154535	150154634	.	+	.	Name=Malate;B73v2_pos=7:144028542;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	150315073	150315172	.	+	.	Name=Glucose;B73v2_pos=7:144158872;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	150340416	150340515	.	+	.	Name=Total_amino_acids;B73v2_pos=7:144204235;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	150345082	150345181	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:144208901;1allele=C/G;version=Hapmap2;RS=rs130651252;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	150346377	150346476	.	+	.	Name=Total_amino_acids;B73v2_pos=7:144210196;1allele=G/T;version=Hapmap2;RS=rs811892508;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	150460697	150460796	.	+	.	Name=Height_above_ear;B73v2_pos=7:144325225;1allele=A/T;version=Hapmap2;RS=rs278378407;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	150539764	150539863	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:144405978;1allele=C/T;version=Hapmap2;RS=rs803999127;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	150676538	150676637	.	+	.	Name=Height_above_ear;B73v2_pos=7:144539112;1allele=T/A;version=Hapmap2;RS=rs819842782;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	150677077	150677176	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:144539651;1allele=G/A;version=Hapmap2;RS=rs130651574;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	150818470	150818569	.	+	.	Name=Total_amino_acids;B73v2_pos=7:144722933;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	150856361	150856460	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:144685036;1allele=G/T;version=Hapmap2;RS=rs278378873;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	150890933	150891032	.	+	.	Name=Total_amino_acids;B73v2_pos=7:144743879;1allele=A/G;version=Hapmap2;RS=rs130652060;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	150901161	150901260	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:144754107;1allele=G/A;version=Hapmap2;RS=rs1063204722;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	150901423	150901522	.	+	.	Name=Height_above_ear;B73v2_pos=7:144754369;1allele=A/G;version=Hapmap2;RS=rs130652127;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	150905197	150905296	.	+	.	Name=Height_above_ear;B73v2_pos=7:144758143;1allele=A/G;version=Hapmap2;RS=rs130652146;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	151037756	151037855	.	+	.	Name=Total_amino_acids;B73v2_pos=7:144889965;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	151052649	151052748	.	+	.	Name=Tassel_length;B73v2_pos=7:144905024;1allele=A/T;version=Hapmap2;RS=rs822777504;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	151056678	151056777	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:144909053;1allele=G/A;version=Hapmap2;RS=rs837322588;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	151104143	151104242	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:144975095;1allele=G/A;version=Hapmap2;RS=rs808194357;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	151122163	151122262	.	+	.	Name=Total_amino_acids;B73v2_pos=7:144981164;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	151222870	151222969	.	+	.	Name=Glutamate;B73v2_pos=7:145081723;1allele=T/C;version=Hapmap2;RS=rs847714485;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	151227734	151227833	.	+	.	Name=Leaf_length;B73v2_pos=7:145086587;1allele=T/C;version=Hapmap2;RS=rs810833159;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	151252106	151252205	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:40046301;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	151293290	151293389	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:145151521;1allele=C/T;version=Hapmap2;RS=rs278379387;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	151348557	151348656	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:145206032;1allele=G/T;version=Hapmap2;RS=rs812981977;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	151349930	151350029	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:145207405;1allele=T/C;version=Hapmap2;RS=rs130652683;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	151354043	151354142	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:145211518;1allele=T/G;version=Hapmap2;RS=rs802948625;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	151358416	151358515	.	+	.	Name=Glutamate;B73v2_pos=7:145215891;1allele=/CG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	151358428	151358527	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:145215903;1allele=T/C;version=Hapmap1;RS=rs132409942;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	151368284	151368383	.	+	.	Name=Glutamate;B73v2_pos=7:145225761;1allele=A/G;version=Hapmap2;RS=rs815220357;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	151410184	151410283	.	+	.	Name=Glutamate;B73v2_pos=7:145267581;1allele=T/C;version=Hapmap2;RS=rs278379855;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	151442598	151442697	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:145290034;1allele=T/A;version=Hapmap2;RS=rs727266806;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	151567606	151567705	.	+	.	Name=Glutamate;B73v2_pos=7:145430319;1allele=G/A;version=Hapmap2;RS=rs840399827;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	151806208	151806307	.	+	.	Name=Height_above_ear;B73v2_pos=7:145644236;1allele=G/A;version=Hapmap2;RS=rs278380834;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	151847025	151847124	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:145712035;1allele=AT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	151863205	151863304	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:145729154;1allele=G/A;version=Hapmap1;RS=rs55623000;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	151863918	151864017	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:145729867;1allele=T/G;version=Hapmap1;RS=rs132410371;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	151868884	151868983	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:145734833;1allele=T/C;version=Hapmap1;RS=rs132410375;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	151892691	151892790	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:145758826;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	151892810	151892909	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:145758945;1allele=C/T;version=Hapmap2;RS=rs801634359;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	151989576	151989675	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:145855081;1allele=T/G;version=Hapmap2;RS=rs835381923;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	151999332	151999431	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:145864833;1allele=A/G;version=Hapmap2;RS=rs848407059;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	152000551	152000650	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:145866052;1allele=G/A;version=Hapmap2;RS=rs829938467;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	152000701	152000800	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:145866202;1allele=A/G;version=Hapmap2;RS=rs843110368;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	152038791	152038890	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:145888696;1allele=A/T;version=Hapmap2;RS=rs826937628;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	152087198	152087297	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:145937104;1allele=T/C;version=Hapmap2;RS=rs803627138;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	152130380	152130479	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:145980283;1allele=C/T;version=Hapmap2;RS=rs808176804;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	152144390	152144489	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:145994294;1allele=G/A;version=Hapmap2;RS=rs820638224;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	152180068	152180167	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:146031113;1allele=C/T;version=Hapmap2;RS=rs130654513;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	152278271	152278370	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:146126743;1allele=G/T;version=Hapmap2;RS=rs845150783;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	152279854	152279953	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:146128326;1allele=C/G;version=Hapmap2;RS=rs846076906;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	152337493	152337592	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:146181685;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	152338799	152338898	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:146182991;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	152394385	152394484	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:146235437;1allele=C/T;version=Hapmap2;RS=rs825061676;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	152397978	152398077	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:146239033;1allele=C/G;version=Hapmap2;RS=rs132410947;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	152397978	152398077	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:146239033;1allele=C/G;version=Hapmap2;RS=rs132410947;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	152401325	152401424	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:146242380;1allele=T/C;version=Hapmap2;RS=rs828690886;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	152403437	152403536	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:146244492;1allele=G/T;version=Hapmap1;RS=rs132411039;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	152414052	152414151	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:146255107;1allele=G/A;version=Hapmap2;RS=rs824078354;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	152425232	152425331	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:146266208;1allele=A/G;version=Hapmap2;RS=rs1063745156;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	152510308	152510407	.	+	.	Name=Glutamate;B73v2_pos=7:146344758;1allele=T/A;version=Hapmap2;RS=rs838366348;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	152515265	152515364	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:146349715;1allele=G/A;version=Hapmap2;RS=rs278381945;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	152529597	152529696	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:146361512;1allele=T/G;version=Hapmap2;RS=rs843405303;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	153032811	153032910	.	+	.	Name=Glutamate;B73v2_pos=7:146549830;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	153060313	153060412	.	+	.	Name=Days_to_silk;B73v2_pos=4:42739903;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	153169387	153169486	.	+	.	Name=Total_amino_acids;B73v2_pos=7:146758564;1allele=C/A;version=Hapmap2;RS=rs278383014;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	153471139	153471238	.	+	.	Name=Leaf_length;B73v2_pos=7:147056828;1allele=C/T;version=Hapmap2;RS=rs803554542;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	153679430	153679529	.	+	.	Name=Leaf_length;B73v2_pos=7:147248762;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	153753054	153753153	.	+	.	Name=Plant_height;B73v2_pos=7:147349861;1allele=T/C;version=Hapmap1;RS=rs132412196;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	153754766	153754865	.	+	.	Name=Total_amino_acids;B73v2_pos=7:147351573;1allele=C/T;version=Hapmap1;RS=rs132412221;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	153891620	153891719	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:147506956;1allele=A/G;version=Hapmap2;RS=rs278384219;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	153962832	153962931	.	+	.	Name=Height_above_ear;B73v2_pos=7:147578172;1allele=G/A;version=Hapmap2;RS=rs130656588;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	153967694	153967793	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:147583034;1allele=A/G;version=Hapmap2;RS=rs821533556;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	154215114	154215213	.	+	.	Name=Glutamate;B73v2_pos=7:147798584;1allele=T/C;version=Hapmap2;RS=rs803800282;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	154612124	154612223	.	+	.	Name=Total_amino_acids;B73v2_pos=7:148183121;1allele=T/C;version=Hapmap2;RS=rs130657438;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	154640373	154640472	.	+	.	Name=Total_amino_acids;B73v2_pos=7:148105384;1allele=C/T;version=Hapmap2;RS=rs130657509;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	154642598	154642697	.	+	.	Name=Glutamate;B73v2_pos=7:148107610;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	154813133	154813232	.	+	.	Name=Total_amino_acids;B73v2_pos=7:148411664;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	155261100	155261199	.	+	.	Name=Total_amino_acids;B73v2_pos=7:148851629;1allele=A/G;version=Hapmap1;RS=rs130658693;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	155261153	155261252	.	+	.	Name=Total_amino_acids;B73v2_pos=7:148851682;1allele=C/T;version=Hapmap1;RS=rs130658694;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	155261288	155261387	.	+	.	Name=Tassel_length;B73v2_pos=7:148851817;1allele=G/A;version=Hapmap1;RS=rs132413362;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	155261288	155261387	.	+	.	Name=Total_amino_acids;B73v2_pos=7:148851817;1allele=G/A;version=Hapmap1;RS=rs132413362;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	155793535	155793634	.	+	.	Name=Height_above_ear;B73v2_pos=7:149370730;1allele=C/T;version=Hapmap2;RS=rs130658951;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	156063265	156063364	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:149610489;1allele=T/C;version=Hapmap2;RS=rs130659181;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	156173772	156173871	.	+	.	Name=Glutamate;B73v2_pos=7:149713579;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	156222975	156223074	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:149763822;1allele=G/A;version=Hapmap2;RS=rs810121861;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	156223031	156223130	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:149763878;1allele=G/A;version=Hapmap2;RS=rs812486561;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	156310664	156310763	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:149850266;1allele=G/A;version=Hapmap2;RS=rs806321542;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	156369461	156369560	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:149907834;1allele=G/A;version=Hapmap2;RS=rs842780971;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	156406899	156406998	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:149945228;1allele=A/G;version=Hapmap2;RS=rs843257768;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	156486394	156486493	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:150022928;1allele=G/T;version=Hapmap2;RS=rs130660180;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	156504210	156504309	.	+	.	Name=Days_to_silk;B73v2_pos=7:150040745;1allele=C/T;version=Hapmap2;RS=rs132414232;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	156517525	156517624	.	+	.	Name=Days_to_silk;B73v2_pos=7:150054050;1allele=A/C;version=Hapmap2;RS=rs278387341;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	159201596	159201695	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:150278482;1allele=C/T;version=Hapmap2;RS=rs725399780;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	159312836	159312935	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:150389468;1allele=T/C;version=Hapmap2;RS=rs1064487357;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	159844449	159844548	.	+	.	Name=Total_amino_acids;B73v2_pos=7:150848618;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	159874450	159874549	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:150870130;1allele=T/A;version=Hapmap2;RS=rs725211085;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	159997044	159997143	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:150978568;1allele=C/A;version=Hapmap2;RS=rs278387839;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	160067157	160067256	.	+	.	Name=Glutamate;B73v2_pos=7:151053912;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	160214290	160214389	.	+	.	Name=Height_above_ear;B73v2_pos=7:151187740;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	160328447	160328546	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:151286345;1allele=G/A;version=Hapmap2;RS=rs849685992;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	160401299	160401398	.	+	.	Name=Glucose;B73v2_pos=7:151383043;1allele=G/C;version=Hapmap2;RS=rs818880968;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	160522790	160522889	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:151486157;1allele=C/T;version=Hapmap2;RS=rs832751232;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	160618928	160619027	.	+	.	Name=Glucose;B73v2_pos=7:151603301;1allele=C/T;version=Hapmap2;RS=rs802679328;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	160875398	160875497	.	+	.	Name=Glutamate;B73v2_pos=7:151847420;1allele=G/A;version=Hapmap2;RS=rs278388558;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	160887498	160887597	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:151859520;1allele=G/A;version=Hapmap2;RS=rs806230834;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	160992891	160992990	.	+	.	Name=Glutamate;B73v2_pos=7:151964468;1allele=G/C;version=Hapmap2;RS=rs815033130;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	161033960	161034059	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:152007423;1allele=G/A;version=Hapmap2;RS=rs132415360;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	161035271	161035370	.	+	.	Name=Tassel_length;B73v2_pos=7:152008734;1allele=T/A;version=Hapmap2;RS=rs278389038;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	161036507	161036606	.	+	.	Name=Tassel_length;B73v2_pos=7:152009970;1allele=C/G;version=Hapmap1;RS=rs132415306;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	161037997	161038096	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152011460;1allele=A/G;version=Hapmap2;RS=rs809960982;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	161092720	161092819	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:152066110;1allele=A/G;version=Hapmap1;RS=rs132415239;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	161199198	161199297	.	+	.	Name=Days_to_silk;B73v2_pos=7:152193926;1allele=T/C;version=Hapmap2;RS=rs820567729;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	161259066	161259165	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:152256678;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161268210	161268309	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:152265663;1allele=C/T;version=Hapmap2;RS=rs1061084503;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	161372850	161372949	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152371890;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161376023	161376122	.	+	.	Name=Height_above_ear;B73v2_pos=7:152374985;1allele=G/A;version=Hapmap2;RS=rs278389760;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	161404879	161404978	.	+	.	Name=Malate;B73v2_pos=7:152403843;1allele=A/G;version=Hapmap2;RS=rs130663035;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	161417460	161417559	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152416375;1allele=A/G;version=Hapmap2;RS=rs842098685;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	161446029	161446128	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152444946;1allele=T/G;version=Hapmap2;RS=rs278389955;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	161447172	161447271	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152446089;1allele=A/G;version=Hapmap2;RS=rs130663065;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	161448145	161448244	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:152447062;1allele=T/C;version=Hapmap2;RS=rs809741485;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	161448537	161448636	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:152447454;1allele=A/G;version=Hapmap2;RS=rs1063107738;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	161448540	161448639	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:152447457;1allele=C/T;version=Hapmap2;RS=rs837633665;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	161448960	161449059	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152447877;1allele=G/A;version=Hapmap2;RS=rs843554992;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	161452304	161452403	.	+	.	Name=Days_to_silk;B73v2_pos=7:152451221;1allele=C/T;version=Hapmap2;RS=rs130663079;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	161452438	161452537	.	+	.	Name=Days_to_silk;B73v2_pos=7:152451355;1allele=C/G;version=Hapmap1;RS=rs278390006;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	161472045	161472144	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:152469403;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161509836	161509935	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:152503916;1allele=T/A;version=Hapmap2;RS=rs828078490;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	161519822	161519921	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152513904;1allele=A/G;version=Hapmap2;RS=rs808399185;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	161743643	161743742	.	+	.	Name=Height_above_ear;B73v2_pos=7:152706595;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161749652	161749751	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:152700586;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161759486	161759585	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:152742578;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161759781	161759880	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:152742283;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161769377	161769476	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:152775884;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	161811519	161811618	.	+	.	Name=Tassel_length;B73v2_pos=7:152807190;1allele=G/A;version=Hapmap1;RS=rs132416462;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	161834631	161834730	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:152830302;1allele=G/C;version=Hapmap2;RS=rs278390356;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	161925452	161925551	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:152915266;1allele=G/A;version=Hapmap2;RS=rs816952998;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	161929130	161929229	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:152918943;1allele=C/T;version=Hapmap2;RS=rs278390478;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	162114551	162114650	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:153104253;1allele=A/G;version=Hapmap2;RS=rs130664306;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	162144694	162144793	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:153133572;1allele=C/T;version=Hapmap2;RS=rs811015153;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	162178086	162178185	.	+	.	Name=Glutamate;B73v2_pos=7:153175439;1allele=G/A;version=Hapmap1;RS=rs132416627;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	162221354	162221453	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:153219178;1allele=T/C;version=Hapmap1;RS=rs130664463;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	162222008	162222107	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:153219832;1allele=C/T;version=Hapmap2;RS=rs815795635;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	162257929	162258028	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153248318;1allele=T/A;version=Hapmap2;RS=rs829500092;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	162260209	162260308	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153250599;1allele=T/A;version=Hapmap1;RS=rs132416845;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	162266994	162267093	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153257384;1allele=C/A;version=Hapmap2;RS=rs814823961;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	162281270	162281369	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153271660;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162309751	162309850	.	+	.	Name=Glutamate;B73v2_pos=7:153300880;1allele=A/G;version=Hapmap2;RS=rs849188106;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	162330365	162330464	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153321493;1allele=G/T;version=Hapmap2;RS=rs808107304;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	162342996	162343095	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153334125;1allele=G/A;version=Hapmap2;RS=rs847110493;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	162413008	162413107	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153424990;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162523545	162523644	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153534771;1allele=T/C;version=Hapmap2;RS=rs807252606;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	162539545	162539644	.	+	.	Name=Tassel_length;B73v2_pos=7:153550774;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162542990	162543089	.	+	.	Name=Days_to_silk;B73v2_pos=7:153554516;1allele=A/G;version=Hapmap2;RS=rs1063347962;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	162552127	162552226	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:153605364;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162570690	162570789	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:153623928;1allele=C/T;version=Hapmap2;RS=rs130665438;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	162602790	162602889	.	+	.	Name=Tassel_length;B73v2_pos=7:153656064;1allele=C/G;version=Hapmap2;RS=rs807298634;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	162649118	162649217	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153671408;1allele=C/T;version=Hapmap2;RS=rs837246338;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	162695109	162695208	.	+	.	Name=Glutamate;B73v2_pos=7:153707889;1allele=A/G;version=Hapmap2;RS=rs821199480;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	162706156	162706255	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153718937;1allele=G/A;version=Hapmap2;RS=rs842656088;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	162711280	162711379	.	+	.	Name=Glutamate;B73v2_pos=7:153721138;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162725173	162725272	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153735031;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162726200	162726299	.	+	.	Name=Total_amino_acids;B73v2_pos=7:153736002;1allele=C/T;version=Hapmap2;RS=rs278392179;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	162770362	162770461	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153780209;1allele=A/G;version=Hapmap2;RS=rs819208581;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	162793151	162793250	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:153803000;1allele=C/T;version=Hapmap2;RS=rs802005726;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	162811507	162811606	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153819789;1allele=G/C;version=Hapmap2;RS=rs823119316;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	162813609	162813708	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:153821891;1allele=G/A;version=Hapmap2;RS=rs836515995;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	162834179	162834278	.	+	.	Name=Tassel_length;B73v2_pos=7:153842454;1allele=C/G;version=Hapmap2;RS=rs278392313;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	162835498	162835597	.	+	.	Name=Glutamate;B73v2_pos=7:153843773;1allele=G/T;version=Hapmap2;RS=rs815418355;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	162841156	162841255	.	+	.	Name=Tassel_length;B73v2_pos=7:153849431;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162841156	162841255	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:153849431;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162843131	162843230	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:153851405;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	162845709	162845808	.	+	.	Name=Tassel_length;B73v2_pos=7:153853983;1allele=T/A;version=Hapmap2;RS=rs278392357;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	162848358	162848457	.	+	.	Name=Leaf_length;B73v2_pos=7:153856632;1allele=A/-;version=Hapmap1;RS=rs132417723;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	162850531	162850630	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:153858805;1allele=A/T;version=Hapmap2;RS=rs849757777;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	162860715	162860814	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:153926901;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	163145583	163145682	.	+	.	Name=Total_amino_acids;B73v2_pos=7:154189157;1allele=C/T;version=Hapmap2;RS=rs820181580;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163147630	163147729	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:154191204;1allele=C/G;version=Hapmap1;RS=rs132417895;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	163155977	163156076	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:154199551;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	163213272	163213371	.	+	.	Name=Glucose;B73v2_pos=7:154254921;1allele=A/C;version=Hapmap1;RS=rs130666441;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	163226988	163227087	.	+	.	Name=Tassel_length;B73v2_pos=7:154268635;1allele=A/G;version=Hapmap2;RS=rs130666498;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	163227895	163227994	.	+	.	Name=Total_amino_acids;B73v2_pos=7:154269541;1allele=T/C;version=Hapmap2;RS=rs130666509;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163227895	163227994	.	+	.	Name=Tassel_length;B73v2_pos=7:154269541;1allele=T/C;version=Hapmap2;RS=rs130666509;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163228753	163228852	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154270399;1allele=T/C;version=Hapmap1;RS=rs132418054;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	163254651	163254750	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154296003;1allele=G/C;version=Hapmap2;RS=rs278392892;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	163255288	163255387	.	+	.	Name=Total_amino_acids;B73v2_pos=7:154296634;1allele=C/T;version=Hapmap2;RS=rs825638107;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163306179	163306278	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154334063;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	163364822	163364921	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:154440410;1allele=T/A;version=Hapmap2;RS=rs844067910;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	163365062	163365161	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154440650;1allele=C/A;version=Hapmap2;RS=rs821775554;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	163451521	163451620	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154477384;1allele=C/T;version=Hapmap2;RS=rs803756317;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163482816	163482915	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:154508682;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	163489345	163489444	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154515211;1allele=C/T;version=Hapmap2;RS=rs837334440;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163496760	163496859	.	+	.	Name=Tassel_length;B73v2_pos=7:154522626;1allele=G/A;version=Hapmap2;RS=rs824074344;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	163499397	163499496	.	+	.	Name=Tassel_length;B73v2_pos=7:154525263;1allele=G/T;version=Hapmap2;RS=rs834589210;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	163512544	163512643	.	+	.	Name=Tassel_length;B73v2_pos=7:154535148;1allele=C/T;version=Hapmap2;RS=rs278393271;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163570181	163570280	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154593178;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	163603405	163603504	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154626579;1allele=C/A;version=Hapmap1;RS=rs132418511;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	163603415	163603514	.	+	.	Name=Glucose;B73v2_pos=7:154626589;1allele=A/C;version=Hapmap2;RS=rs842598794;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	163634790	163634889	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154658174;1allele=G/C;version=Hapmap2;RS=rs835769334;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	163655873	163655972	.	+	.	Name=Glucose;B73v2_pos=7:154699090;1allele=G/A;version=Hapmap2;RS=rs830429119;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	163691493	163691592	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:154713149;1allele=G/A;version=Hapmap2;RS=rs804338945;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	163697614	163697713	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:154719270;1allele=G/A;version=Hapmap2;RS=rs835466179;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	163711703	163711802	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:154733360;1allele=C/T;version=Hapmap2;RS=rs832651226;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163715023	163715122	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:154736680;1allele=A/G;version=Hapmap2;RS=rs835440319;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	163728568	163728667	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:154750226;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	163728579	163728678	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:154750237;1allele=C/T;version=Hapmap2;RS=rs278393535;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163728579	163728678	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:154750237;1allele=C/T;version=Hapmap2;RS=rs278393535;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163732167	163732266	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:154753958;1allele=C/T;version=Hapmap2;RS=rs804379851;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	163975793	163975892	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:155020118;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	164007067	164007166	.	+	.	Name=Days_to_silk;B73v2_pos=7:155051395;1allele=T/A;version=Hapmap2;RS=rs842489287;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	164093207	164093306	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:155092729;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	164248174	164248273	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:155253852;1allele=G/A;version=Hapmap2;RS=rs841803021;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	164251394	164251493	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:155257072;1allele=A/G;version=Hapmap2;RS=rs812466904;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	164300223	164300322	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:155305075;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	164361685	164361784	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:155346603;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	164386998	164387097	.	+	.	Name=Cob_diameter;B73v2_pos=7:155371911;1allele=G/A;version=Hapmap2;RS=rs846823651;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	164509099	164509198	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:155581029;1allele=G/T;version=Hapmap2;RS=rs813547945;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	164526313	164526412	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:155598243;1allele=T/C;version=Hapmap2;RS=rs817054200;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	164544847	164544946	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:155576459;1allele=C/A;version=Hapmap2;RS=rs840521712;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	164683920	164684019	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:155699968;1allele=G/C;version=Hapmap2;RS=rs843389824;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	164740077	164740176	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:155754006;1allele=T/G;version=Hapmap2;RS=rs802265830;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	164759054	164759153	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:155772484;1allele=T/C;version=Hapmap2;RS=rs841209607;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	164819220	164819319	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:155832442;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	164824845	164824944	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:155838067;1allele=G/A;version=Hapmap2;RS=rs818549474;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	164913299	164913398	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:155916052;1allele=T/C;version=Hapmap2;RS=rs839538995;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	164913940	164914039	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:155916693;1allele=G/A;version=Hapmap2;RS=rs828514990;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	164913943	164914042	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:155916696;1allele=T/G;version=Hapmap2;RS=rs839889261;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	164980319	164980418	.	+	.	Name=Glucose;B73v2_pos=7:156000751;1allele=T/C;version=Hapmap2;RS=rs813922725;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	165052071	165052170	.	+	.	Name=Stalk_strength;B73v2_pos=7:156081689;1allele=C/T;version=Hapmap2;RS=rs816967206;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	165095452	165095551	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:156121198;1allele=TGCGGA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165095620	165095719	.	+	.	Name=Total_amino_acids;B73v2_pos=7:156121366;1allele=C/G;version=Hapmap1;RS=rs130669190;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	165104391	165104490	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:156130137;1allele=G/A;version=Hapmap2;RS=rs130669159;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	165174288	165174387	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:156204019;1allele=G/C;version=Hapmap2;RS=rs130668815;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	165177966	165178065	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:156207698;1allele=C/T;version=Hapmap2;RS=rs825803833;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	165189832	165189931	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:156219564;1allele=T/C;version=Hapmap2;RS=rs130668952;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	165194445	165194544	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:156224177;1allele=C/T;version=Hapmap2;RS=rs814881364;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	165198728	165198827	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:156228460;1allele=+/-;version=Hapmap2;RS=rs130669303;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	165213178	165213277	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:156243242;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165241735	165241834	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:156271280;1allele=C/T;version=Hapmap2;RS=rs840295086;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	165303616	165303715	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:156330205;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165318271	165318370	.	+	.	Name=Starch;B73v2_pos=7:156315549;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165344865	165344964	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:156288945;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165450667	165450766	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:156479054;1allele=C/T;version=Hapmap2;RS=rs278395067;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	165463229	165463328	.	+	.	Name=Cob_diameter;B73v2_pos=7:156491617;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165472434	165472533	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:156500822;1allele=G/A;version=Hapmap2;RS=rs840860319;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	165716819	165716918	.	+	.	Name=Tassel_length;B73v2_pos=7:156717857;1allele=T/C;version=Hapmap2;RS=rs278395572;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	165747074	165747173	.	+	.	Name=Total_amino_acids;B73v2_pos=7:156737630;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165749627	165749726	.	+	.	Name=Total_amino_acids;B73v2_pos=7:156735085;1allele=/GATCT;version=Hapmap1;RS=rs130670405;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	165751196	165751295	.	+	.	Name=Total_amino_acids;B73v2_pos=7:156733516;1allele=C/T;version=Hapmap2;RS=rs840924275;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	165767905	165768004	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:156804256;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165767949	165768048	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:156804212;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	165878266	165878365	.	+	.	Name=Total_amino_acids;B73v2_pos=7:156861951;1allele=C/T;version=Hapmap2;RS=rs837931279;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	166156450	166156549	.	+	.	Name=Tassel_length;B73v2_pos=7:157140496;1allele=T/C;version=Hapmap2;RS=rs846093663;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	166156917	166157016	.	+	.	Name=Tassel_length;B73v2_pos=7:157140963;1allele=G/A;version=Hapmap2;RS=rs725169660;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	166159095	166159194	.	+	.	Name=Tassel_length;B73v2_pos=7:157143141;1allele=ACGATG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	166170928	166171027	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:157154974;1allele=G/A;version=Hapmap2;RS=rs835788883;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	166181563	166181662	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157166236;1allele=T/C;version=Hapmap1;RS=rs132422164;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	166302278	166302377	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:157286869;1allele=G/C;version=Hapmap2;RS=rs804263706;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	166496220	166496319	.	+	.	Name=Total_amino_acids;B73v2_pos=7:157433862;1allele=T/G;version=Hapmap2;RS=rs132422775;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	166496893	166496992	.	+	.	Name=Stalk_strength;B73v2_pos=7:157434534;1allele=G/C;version=Hapmap2;RS=rs836742767;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	166498101	166498200	.	+	.	Name=Tassel_length;B73v2_pos=7:157435742;1allele=T/C;version=Hapmap1;RS=rs1063511129;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166504031	166504130	.	+	.	Name=Tassel_length;B73v2_pos=7:157441672;1allele=C/G;version=Hapmap2;RS=rs804753000;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	166518753	166518852	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:157456394;1allele=G/A;version=Hapmap2;RS=rs803809500;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	166536573	166536672	.	+	.	Name=Tassel_length;B73v2_pos=7:157474160;1allele=G/A;version=Hapmap2;RS=rs278397119;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166536785	166536884	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:157474372;1allele=C/A;version=Hapmap1;RS=rs278397126;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	166536785	166536884	.	+	.	Name=Tassel_length;B73v2_pos=7:157474372;1allele=A/C;version=Hapmap2;RS=rs278397126;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	166543915	166544014	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157481495;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	166543980	166544079	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:157481560;1allele=A/G;version=Hapmap2;RS=rs847532208;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166544979	166545078	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:157482559;1allele=G/T;version=Hapmap2;RS=rs822445785;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	166564336	166564435	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:157501723;1allele=G/A;version=Hapmap2;RS=rs810432345;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	166565990	166566089	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:157503377;1allele=G/A;version=Hapmap2;RS=rs808041632;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	166578537	166578635	.	+	.	Name=Glucose;B73v2_pos=7:157534503;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	166578537	166578628	.	+	.	Name=Glucose;B73v2_pos=7:157534510;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	166640474	166640573	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157585811;1allele=A/G;version=Hapmap2;RS=rs848613913;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166646389	166646488	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:157591726;1allele=A/G;version=Hapmap2;RS=rs847335894;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166650908	166651007	.	+	.	Name=Glucose;B73v2_pos=7:157596245;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	166655234	166655333	.	+	.	Name=Total_amino_acids;B73v2_pos=7:157600567;1allele=A/G;version=Hapmap1;RS=rs132423369;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166683153	166683252	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:157628488;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	166685510	166685609	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:157630775;1allele=C/T;version=Hapmap2;RS=rs812950481;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	166688093	166688192	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:157633358;1allele=C/T;version=Hapmap2;RS=rs816993383;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	166701842	166701941	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157646617;1allele=T/C;version=Hapmap2;RS=rs817333370;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	166702247	166702346	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157647022;1allele=C/A;version=Hapmap2;RS=rs843259481;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	166721933	166722032	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157666709;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	166724114	166724213	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157669122;1allele=A/G;version=Hapmap2;RS=rs807584029;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166724804	166724903	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157669812;1allele=G/A;version=Hapmap2;RS=rs828852247;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	166724998	166725097	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:157670006;1allele=T/C;version=Hapmap2;RS=rs813201412;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	166724998	166725097	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:157670006;1allele=T/C;version=Hapmap2;RS=rs813201412;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	166726810	166726909	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:157671818;1allele=A/G;version=Hapmap2;RS=rs829053448;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166741787	166741886	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:157686882;1allele=C/T;version=Hapmap2;RS=rs831334515;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	166758994	166759093	.	+	.	Name=Nitrate;B73v2_pos=7:157704088;1allele=C/T;version=Hapmap2;RS=rs802487263;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	166766068	166766167	.	+	.	Name=Nitrate;B73v2_pos=7:157711165;1allele=A/G;version=Hapmap2;RS=rs801878102;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	166820032	166820131	.	+	.	Name=Tassel_length;B73v2_pos=7:157767847;1allele=C/G;version=Hapmap2;RS=rs803324263;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	166952789	166952888	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:157895446;1allele=C/G;version=Hapmap2;RS=rs724192818;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	166955393	166955492	.	+	.	Name=Days_to_silk;B73v2_pos=7:157898050;1allele=A/G;version=Hapmap2;RS=rs826574943;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	166961385	166961484	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:157903746;1allele=C/T;version=Hapmap2;RS=rs807516786;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	166961385	166961484	.	+	.	Name=Days_to_silk;B73v2_pos=7:157903746;1allele=C/T;version=Hapmap2;RS=rs807516786;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	166961400	166961499	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:157903761;1allele=T/C;version=Hapmap2;RS=rs804835985;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	166963685	166963784	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:157906046;1allele=G/A;version=Hapmap2;RS=rs1064245274;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	167171810	167171909	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:158103779;1allele=G/C;version=Hapmap1;RS=rs132423829;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	167171905	167172004	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:158103874;1allele=G/A;version=Hapmap2;RS=rs130672662;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	167179681	167179780	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:158111649;1allele=G/A;version=Hapmap2;RS=rs830280443;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	167199213	167199312	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158137838;1allele=G/T;version=Hapmap2;RS=rs841185582;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	167220164	167220263	.	+	.	Name=Nitrate;B73v2_pos=7:158158593;1allele=T/C;version=Hapmap2;RS=rs806100134;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	167220170	167220269	.	+	.	Name=Nitrate;B73v2_pos=7:158158599;1allele=T/A;version=Hapmap2;RS=rs817801082;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	167222532	167222631	.	+	.	Name=Nitrate;B73v2_pos=7:158160961;1allele=C/T;version=Hapmap2;RS=rs130672816;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	167222639	167222738	.	+	.	Name=Days_to_silk;B73v2_pos=7:158161068;1allele=G/T;version=Hapmap1;RS=rs132424053;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	167222691	167222790	.	+	.	Name=Nitrate;B73v2_pos=7:158161120;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167259536	167259635	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158197131;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167267194	167267293	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158204798;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167284413	167284512	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158215183;1allele=-/+;version=Hapmap2;RS=rs827188637;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	167309553	167309652	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158238145;1allele=/TATA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167310133	167310232	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158238725;1allele=T/C;version=Hapmap2;RS=rs132424144;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	167310238	167310334	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:158238827;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167311431	167311530	.	+	.	Name=Glucose;B73v2_pos=7:158240023;1allele=G/T;version=Hapmap1;RS=rs132424164;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	167311910	167312009	.	+	.	Name=Glucose;B73v2_pos=7:158240502;1allele=A/C;version=Hapmap2;RS=rs132424173;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	167313906	167314005	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158242498;1allele=C/A;version=Hapmap2;RS=rs824656730;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	167314215	167314314	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:158242807;1allele=A/C;version=Hapmap2;RS=rs806470841;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	167314222	167314321	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:158242814;1allele=-/+;version=Hapmap2;RS=rs817512659;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	167314631	167314730	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:158243223;1allele=G/A;version=Hapmap2;RS=rs132424213;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	167315174	167315273	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:158243766;1allele=G/T;version=Hapmap2;RS=rs802959721;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	167315174	167315273	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:158243766;1allele=G/T;version=Hapmap2;RS=rs802959721;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	167333441	167333540	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:158262237;1allele=A/T;version=Hapmap2;RS=rs829956856;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	167334576	167334675	.	+	.	Name=Plant_height;B73v2_pos=7:158263372;1allele=T/C;version=Hapmap2;RS=rs822107165;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	167340680	167340779	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:158269476;1allele=G/A;version=Hapmap2;RS=rs130672923;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	167366115	167366214	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:158294914;1allele=C/T;version=Hapmap2;RS=rs130672949;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	167400921	167401020	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158329608;1allele=C/T;version=Hapmap2;RS=rs822092954;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	167416400	167416499	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158345089;1allele=T/A;version=Hapmap2;RS=rs278398275;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	167435881	167435980	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158364142;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167440123	167440222	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:158368384;1allele=C/T;version=Hapmap2;RS=rs130673059;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	167471124	167471223	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:158388739;1allele=G/A;version=Hapmap2;RS=rs822654193;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	167508079	167508178	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158433075;1allele=C/T;version=Hapmap2;RS=rs809658978;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	167553147	167553246	.	+	.	Name=Total_amino_acids;B73v2_pos=7:158510181;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167563132	167563231	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158500193;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167610618	167610717	.	+	.	Name=Glucose;B73v2_pos=7:158535490;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167619762	167619861	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:158544637;1allele=G/T;version=Hapmap2;RS=rs130673370;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	167619802	167619901	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:158544677;1allele=G/A;version=Hapmap2;RS=rs844530147;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	167656034	167656133	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158581074;1allele=C/T;version=Hapmap2;RS=rs825904819;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	167703217	167703316	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158626702;1allele=T/A;version=Hapmap2;RS=rs803782767;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	167714972	167715071	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158638456;1allele=G/A;version=Hapmap2;RS=rs804553165;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	167721900	167721999	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158645385;1allele=G/A;version=Hapmap2;RS=rs845682511;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	167773218	167773317	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:158696673;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167812618	167812717	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158736512;1allele=G/A;version=Hapmap2;RS=rs841120467;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	167835137	167835236	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158759030;1allele=C/T;version=Hapmap2;RS=rs832014648;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	167841887	167841986	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158765780;1allele=C/T;version=Hapmap2;RS=rs827229878;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	167855462	167855561	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158821026;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167939636	167939735	.	+	.	Name=Leaf_length;B73v2_pos=6:129118876;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	167974124	167974223	.	+	.	Name=Days_to_silk;B73v2_pos=7:158936784;1allele=G/C;version=Hapmap1;RS=rs726817731;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	167975245	167975344	.	+	.	Name=Starch;B73v2_pos=7:158937905;1allele=A/G;version=Hapmap1;RS=rs132424693;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	168168906	168169005	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:159131755;1allele=A/G;version=Hapmap2;RS=rs130673845;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	168171422	168171521	.	+	.	Name=Starch;B73v2_pos=7:159134271;1allele=C/T;version=Hapmap1;RS=rs130673851;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	168175465	168175564	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:159138314;1allele=A/G;version=Hapmap2;RS=rs278398951;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	168178763	168178862	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:159141612;1allele=C/A;version=Hapmap2;RS=rs130673880;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	168204247	168204346	.	+	.	Name=Cob_diameter;B73v2_pos=7:159167104;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	168245548	168245647	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:159213776;1allele=G/A;version=Hapmap2;RS=rs804886351;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	168396023	168396122	.	+	.	Name=Total_amino_acids;B73v2_pos=7:159359943;1allele=T/C;version=Hapmap2;RS=rs809729576;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	168448015	168448114	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:159410691;1allele=C/T;version=Hapmap1;RS=rs130674085;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	168450213	168450312	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:159412889;1allele=A/G;version=Hapmap2;RS=rs848472367;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	168503789	168503888	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:159463756;1allele=A/G;version=Hapmap2;RS=rs833563689;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	168539148	168539247	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:159498260;1allele=A/C;version=Hapmap2;RS=rs1064199818;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	168579143	168579242	.	+	.	Name=Cob_diameter;B73v2_pos=7:159538000;1allele=T/C;version=Hapmap2;RS=rs130674494;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	168610090	168610189	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:159568962;1allele=G/A;version=Hapmap2;RS=rs808592286;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	168612954	168613053	.	+	.	Name=Cob_diameter;B73v2_pos=7:159571826;1allele=A/T;version=Hapmap2;RS=rs1062554310;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	168623864	168623963	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:159582737;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	168637043	168637142	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:159595917;1allele=C/T;version=Hapmap2;RS=rs1062315369;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	168783865	168783964	.	+	.	Name=Starch;B73v2_pos=7:159830010;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	168819209	168819308	.	+	.	Name=Stalk_strength;B73v2_pos=7:159732624;1allele=C/A;version=Hapmap2;RS=rs807678135;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	168841983	168842082	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:159743547;1allele=G/A;version=Hapmap2;RS=rs846225290;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	168857694	168857793	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:159757110;1allele=A/C;version=Hapmap1;RS=rs132425830;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	168858571	168858670	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:159757987;1allele=C/G;version=Hapmap2;RS=rs278400081;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	168859466	168859565	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:159758882;1allele=A/G;version=Hapmap2;RS=rs278400105;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	168859947	168860046	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:159759363;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	168871004	168871103	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:159770419;1allele=C/A;version=Hapmap2;RS=rs837811396;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	168872686	168872785	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:159772101;1allele=A/G;version=Hapmap2;RS=rs817394637;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	168872813	168872912	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:159772228;1allele=T/C;version=Hapmap2;RS=rs278400176;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	168877867	168877966	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:159777281;1allele=C/T;version=Hapmap2;RS=rs278400179;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	168880393	168880492	.	+	.	Name=Leaf_length;B73v2_pos=7:159779807;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	168882292	168882391	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:159781706;1allele=A/T;version=Hapmap2;RS=rs826728259;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	168884023	168884122	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:159783437;1allele=T/G;version=Hapmap2;RS=rs132425716;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	168926528	168926627	.	+	.	Name=Ear_row_number;B73v2_pos=7:159893801;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	168929469	168929568	.	+	.	Name=Nodes_to_ear;B73v2_pos=7:159896742;1allele=C/T;version=Hapmap2;RS=rs823731803;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	168933692	168933791	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:159900965;1allele=A/G;version=Hapmap2;RS=rs839945482;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	168933844	168933943	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:159901117;1allele=C/T;version=Hapmap1;RS=rs818027383;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	169116488	169116587	.	+	.	Name=Stalk_strength;B73v2_pos=7:160056404;1allele=C/A;version=Hapmap1;RS=rs132426446;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	169116888	169116987	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:160056804;1allele=C/T;version=Hapmap2;RS=rs827624015;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	169143142	169143241	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:160079655;1allele=G/A;version=Hapmap2;RS=rs827856558;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	169143142	169143241	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:160079655;1allele=G/A;version=Hapmap2;RS=rs827856558;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	169148031	169148130	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:160084544;1allele=G/T;version=Hapmap2;RS=rs130675540;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	169163195	169163294	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:160099710;1allele=G/T;version=Hapmap1;RS=rs132426540;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	169213893	169213992	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:160145666;1allele=A/G;version=Hapmap2;RS=rs815106511;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	169313008	169313107	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:160241332;1allele=T/C;version=Hapmap2;RS=rs803054089;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	169366735	169366834	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:160295195;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169415152	169415251	.	+	.	Name=Leaf_length;B73v2_pos=7:160340594;1allele=T/C;version=Hapmap2;RS=rs829750157;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	169506697	169506796	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:160431863;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169506697	169506796	.	+	.	Name=Plant_height;B73v2_pos=7:160431863;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169528365	169528464	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:160453152;1allele=T/A;version=Hapmap2;RS=rs832162424;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	169528365	169528464	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:160453152;1allele=T/A;version=Hapmap2;RS=rs832162424;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	169528365	169528464	.	+	.	Name=Plant_height;B73v2_pos=7:160453152;1allele=T/A;version=Hapmap2;RS=rs832162424;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	169554103	169554202	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:160481070;1allele=G/A;version=Hapmap2;RS=rs725932008;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	169580959	169581058	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:160508896;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169583092	169583191	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:160511029;1allele=C/T;version=Hapmap1;RS=rs132427338;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	169583105	169583204	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:160511042;1allele=/TTT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169584250	169584349	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:160512187;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169604592	169604691	.	+	.	Name=Plant_height;B73v2_pos=7:160532531;1allele=C/A;version=Hapmap1;RS=rs132427506;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	169606118	169606217	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:160534057;1allele=A/C;version=Hapmap2;RS=rs819753670;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	169606163	169606262	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:160534102;1allele=G/C;version=Hapmap2;RS=rs846224533;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	169606552	169606651	.	+	.	Name=Plant_height;B73v2_pos=7:160534491;1allele=A/G;version=Hapmap2;RS=rs808736002;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	169630227	169630326	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:160557222;1allele=T/C;version=Hapmap2;RS=rs278402171;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	169630532	169630631	.	+	.	Name=Starch;B73v2_pos=7:160557527;1allele=C/T;version=Hapmap2;RS=rs820276111;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	169634653	169634752	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:160561648;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169658461	169658560	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:160575826;1allele=A/G;version=Hapmap2;RS=rs802760111;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	169665526	169665625	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:160588869;1allele=A/C;version=Hapmap2;RS=rs832105555;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	169671674	169671773	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:160595018;1allele=G/A;version=Hapmap2;RS=rs132427704;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	169674883	169674982	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:160598227;1allele=G/C;version=Hapmap2;RS=rs809854553;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	169677121	169677220	.	+	.	Name=Starch;B73v2_pos=7:160600465;1allele=G/C;version=Hapmap2;RS=rs846284661;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	169769073	169769172	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:160750580;1allele=G/T;version=Hapmap2;RS=rs841510681;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	169769093	169769192	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:160750600;1allele=C/T;version=Hapmap2;RS=rs842462428;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	169771128	169771227	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:160752635;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	169773887	169773986	.	+	.	Name=Leaf_length;B73v2_pos=7:160755389;1allele=A/T;version=Hapmap2;RS=rs808292052;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	169773891	169773990	.	+	.	Name=Leaf_length;B73v2_pos=7:160755393;1allele=T/A;version=Hapmap2;RS=rs818817311;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	169899497	169899596	.	+	.	Name=Plant_height;B73v2_pos=7:160929803;1allele=C/T;version=Hapmap2;RS=rs829262018;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	169997218	169997317	.	+	.	Name=Ear_height;B73v2_pos=7:160834189;1allele=A/C;version=Hapmap2;RS=rs809924509;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	170022478	170022577	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:160946036;1allele=G/A;version=Hapmap2;RS=rs724930278;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	170025427	170025526	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:160948985;1allele=G/C;version=Hapmap2;RS=rs841362708;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	170066094	170066193	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:160990575;1allele=G/T;version=Hapmap2;RS=rs278402595;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	170074075	170074174	.	+	.	Name=Leaf_width;B73v2_pos=7:160998555;1allele=C/A;version=Hapmap2;RS=rs804829232;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	170138621	170138720	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:161062988;1allele=G/C;version=Hapmap2;RS=rs819157885;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	170204111	170204210	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:161128198;1allele=C/A;version=Hapmap2;RS=rs845309248;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	170257566	170257665	.	+	.	Name=Stalk_strength;B73v2_pos=7:161193153;1allele=G/A;version=Hapmap2;RS=rs840714632;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	170316814	170316913	.	+	.	Name=Stalk_strength;B73v2_pos=7:161263538;1allele=T/A;version=Hapmap2;RS=rs826857379;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	170354799	170354898	.	+	.	Name=Plant_height;B73v2_pos=7:161285193;1allele=T/G;version=Hapmap2;RS=rs821159835;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	170354815	170354914	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:161285209;1allele=T/C;version=Hapmap2;RS=rs809477750;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	170354815	170354914	.	+	.	Name=Plant_height;B73v2_pos=7:161285209;1allele=T/C;version=Hapmap2;RS=rs809477750;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	170355861	170355960	.	+	.	Name=Plant_height;B73v2_pos=7:161286255;1allele=G/A;version=Hapmap2;RS=rs132428402;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	170419442	170419541	.	+	.	Name=Plant_height;B73v2_pos=7:161339971;1allele=T/G;version=Hapmap1;RS=rs132428552;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	170426595	170426694	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:161347122;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170428938	170429037	.	+	.	Name=Plant_height;B73v2_pos=7:161349465;1allele=A/G;version=Hapmap2;RS=rs844515278;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	170428938	170429037	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:161349465;1allele=A/G;version=Hapmap2;RS=rs844515278;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	170434884	170434983	.	+	.	Name=Plant_height;B73v2_pos=7:161355412;1allele=C/T;version=Hapmap2;RS=rs847334258;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	170434884	170434983	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:161355412;1allele=C/T;version=Hapmap2;RS=rs847334258;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	170434884	170434983	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:161355412;1allele=C/T;version=Hapmap2;RS=rs847334258;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	170436376	170436475	.	+	.	Name=Plant_height;B73v2_pos=7:161356904;1allele=A/C;version=Hapmap2;RS=rs834959335;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	170438973	170439072	.	+	.	Name=Stalk_strength;B73v2_pos=7:161359501;1allele=A/T;version=Hapmap2;RS=rs836256776;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	170439094	170439193	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:161359622;1allele=C/T;version=Hapmap2;RS=rs837037996;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	170473570	170473669	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:161393563;1allele=T/C;version=Hapmap2;RS=rs834171720;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	170475914	170476013	.	+	.	Name=Ear_height;B73v2_pos=7:161395908;1allele=A/G;version=Hapmap2;RS=rs815708686;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	170517082	170517181	.	+	.	Name=Stalk_strength;B73v2_pos=7:161437081;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170517657	170517756	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:161437656;1allele=C/G;version=Hapmap2;RS=rs725391265;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	170518742	170518841	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:161438741;1allele=T/A;version=Hapmap1;RS=rs132428726;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	170531269	170531368	.	+	.	Name=Stalk_strength;B73v2_pos=7:161451268;1allele=A/T;version=Hapmap2;RS=rs832466054;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	170640366	170640465	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:161621437;1allele=A/T;version=Hapmap1;RS=rs132428846;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	170703765	170703864	.	+	.	Name=Plant_height;B73v2_pos=7:161684912;1allele=A/C;version=Hapmap1;RS=rs132428999;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	170703765	170703864	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:161684912;1allele=A/C;version=Hapmap1;RS=rs132428999;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	170703888	170703987	.	+	.	Name=Plant_height;B73v2_pos=7:161685035;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170706439	170706538	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:161687586;1allele=G/A;version=Hapmap2;RS=rs814996098;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	170708075	170708174	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:161689222;1allele=T/C;version=Hapmap2;RS=rs836076739;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	170715634	170715733	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:161696781;1allele=A/G;version=Hapmap2;RS=rs841840034;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	170715972	170716071	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:161697119;1allele=A/G;version=Hapmap1;RS=rs848073480;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	170723968	170724067	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:161705059;1allele=T/C;version=Hapmap1;RS=rs844389857;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	170859546	170859645	.	+	.	Name=Plant_height;B73v2_pos=7:161799584;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170859546	170859645	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:161799584;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170861412	170861511	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:161801450;1allele=A/G;version=Hapmap2;RS=rs278403279;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	170863962	170864061	.	+	.	Name=Ear_height;B73v2_pos=7:161804000;1allele=G/C;version=Hapmap2;RS=rs130677768;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	170865369	170865468	.	+	.	Name=Plant_height;B73v2_pos=7:161805407;1allele=C/G;version=Hapmap1;RS=rs132429444;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	170866336	170866435	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:161806374;1allele=C/G;version=Hapmap2;RS=rs810876987;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	170866830	170866929	.	+	.	Name=Plant_height;B73v2_pos=7:161806868;1allele=G/C;version=Hapmap2;RS=rs824610657;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	170896782	170896881	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:161836981;1allele=G/A;version=Hapmap2;RS=rs823907767;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	170908218	170908317	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:161848417;1allele=G/A;version=Hapmap2;RS=rs727466078;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	170920868	170920967	.	+	.	Name=Stalk_strength;B73v2_pos=7:161861067;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170921207	170921306	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:161861406;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170924539	170924638	.	+	.	Name=Ear_height;B73v2_pos=7:161864738;1allele=C/G;version=Hapmap2;RS=rs842277388;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	170924966	170925065	.	+	.	Name=Ear_height;B73v2_pos=7:161865165;1allele=A/G;version=Hapmap2;RS=rs832730981;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	170931585	170931684	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:161873290;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170931585	170931684	.	+	.	Name=Stalk_strength;B73v2_pos=7:161873290;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	170932443	170932542	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:161874148;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171019431	171019530	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:161956249;1allele=C/T;version=Hapmap2;RS=rs805638746;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171024753	171024852	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:161961571;1allele=C/T;version=Hapmap2;RS=rs130678084;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171065274	171065373	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:162001838;1allele=C/T;version=Hapmap2;RS=rs806065922;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171065274	171065373	.	+	.	Name=Plant_height;B73v2_pos=7:162001838;1allele=C/T;version=Hapmap2;RS=rs806065922;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171086922	171087021	.	+	.	Name=Stalk_strength;B73v2_pos=7:162024484;1allele=A/T;version=Hapmap2;RS=rs819606337;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	171087779	171087878	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:162025339;1allele=A/G;version=Hapmap2;RS=rs132430153;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	171088141	171088240	.	+	.	Name=Stalk_strength;B73v2_pos=7:162025701;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171089507	171089606	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:162027067;1allele=C/T;version=Hapmap2;RS=rs132430211;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171097487	171097586	.	+	.	Name=Stalk_strength;B73v2_pos=7:162035147;1allele=T/C;version=Hapmap2;RS=rs130678171;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	171099088	171099187	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:162036748;1allele=C/T;version=Hapmap2;RS=rs828313803;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171101803	171101902	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162039463;1allele=C/T;version=Hapmap2;RS=rs816328375;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171102563	171102662	.	+	.	Name=Stalk_strength;B73v2_pos=7:162040223;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171134933	171135032	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162072591;1allele=T/A;version=Hapmap2;RS=rs811538367;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	171137301	171137400	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162074959;1allele=C/T;version=Hapmap2;RS=rs844097424;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171140145	171140244	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162077803;1allele=C/G;version=Hapmap2;RS=rs816971432;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	171144624	171144723	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162082282;1allele=G/A;version=Hapmap2;RS=rs846051889;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	171148865	171148964	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:162086523;1allele=T/C;version=Hapmap2;RS=rs278403985;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	171155697	171155796	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:162093355;1allele=C/T;version=Hapmap2;RS=rs839713788;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171206720	171206819	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162144798;1allele=C/T;version=Hapmap2;RS=rs820833802;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171207000	171207099	.	+	.	Name=Stalk_strength;B73v2_pos=7:162145078;1allele=T/C;version=Hapmap2;RS=rs847423597;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	171210177	171210276	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162148255;1allele=A/T;version=Hapmap2;RS=rs808916349;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	171217770	171217869	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:162155848;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171217822	171217921	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:162155900;1allele=A/G;version=Hapmap2;RS=rs810031234;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	171219371	171219470	.	+	.	Name=Leaf_length;B73v2_pos=7:162157449;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171266559	171266658	.	+	.	Name=Height_above_ear;B73v2_pos=7:162179613;1allele=G/A;version=Hapmap2;RS=rs278404187;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	171266819	171266918	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:162179873;1allele=G/A;version=Hapmap2;RS=rs806634725;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	171271168	171271267	.	+	.	Name=Stalk_strength;B73v2_pos=7:162184222;1allele=G/A;version=Hapmap2;RS=rs814474509;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	171274105	171274204	.	+	.	Name=Stalk_strength;B73v2_pos=7:162187160;1allele=C/G;version=Hapmap2;RS=rs829020917;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	171283088	171283187	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162196142;1allele=T/C;version=Hapmap2;RS=rs826379174;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	171285916	171286015	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:162198970;1allele=T/A;version=Hapmap2;RS=rs812883336;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	171288920	171289019	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:162201974;1allele=A/T;version=Hapmap2;RS=rs844385570;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	171288927	171289026	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:162201981;1allele=C/A;version=Hapmap2;RS=rs812028373;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	171289272	171289371	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:162202326;1allele=C/A;version=Hapmap2;RS=rs132430660;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	171289272	171289371	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:162202326;1allele=C/A;version=Hapmap2;RS=rs132430660;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	171291297	171291396	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:162204351;1allele=T/C;version=Hapmap2;RS=rs1062824001;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	171297904	171298003	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:162210958;1allele=A/C;version=Hapmap2;RS=rs805478728;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	171335167	171335266	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162249297;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171356847	171356946	.	+	.	Name=Stalk_strength;B73v2_pos=7:162259613;1allele=C/T;version=Hapmap2;RS=rs132430818;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171358179	171358278	.	+	.	Name=Stalk_strength;B73v2_pos=7:162260945;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171387631	171387730	.	+	.	Name=Stalk_strength;B73v2_pos=7:162311612;1allele=C/T;version=Hapmap2;RS=rs850216181;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171390113	171390212	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:162314094;1allele=A/G;version=Hapmap2;RS=rs802201652;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	171394291	171394390	.	+	.	Name=Leaf_width;B73v2_pos=7:162318272;1allele=A/C;version=Hapmap2;RS=rs1061621137;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	171395531	171395630	.	+	.	Name=Leaf_length;B73v2_pos=7:162319512;1allele=T/C;version=Hapmap2;RS=rs803712107;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	171399023	171399122	.	+	.	Name=Height_above_ear;B73v2_pos=7:162323004;1allele=G/C;version=Hapmap2;RS=rs724213532;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	171413978	171414077	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:162337962;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171414668	171414767	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:162338652;1allele=T/A;version=Hapmap2;RS=rs807203164;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	171418668	171418767	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:162342652;1allele=C/G;version=Hapmap1;RS=rs822977040;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	171466137	171466236	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:162391424;1allele=A/G;version=Hapmap2;RS=rs130678692;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	171495406	171495505	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:162419281;1allele=G/A;version=Hapmap2;RS=rs819894522;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	171577651	171577750	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162506819;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171596322	171596421	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162532478;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171681581	171681680	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:162618538;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171687117	171687216	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162624075;1allele=A/G;version=Hapmap2;RS=rs841344009;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	171716938	171717037	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:162655063;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171796935	171797034	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:162710488;1allele=G/T;version=Hapmap2;RS=rs278405370;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	171884819	171884918	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:162804190;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171890810	171890909	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:162810180;1allele=G/A;version=Hapmap2;RS=rs841547530;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	171920622	171920721	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:162838129;1allele=G/T;version=Hapmap2;RS=rs808949459;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	171923047	171923146	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:162840554;1allele=C/T;version=Hapmap2;RS=rs130679313;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	171923266	171923365	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:162840773;1allele=G/T;version=Hapmap2;RS=rs825869358;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	171936940	171937039	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:162852273;1allele=G/A;version=Hapmap2;RS=rs846986692;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	171963619	171963718	.	+	.	Name=Stalk_strength;B73v2_pos=7:162946808;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171963659	171963758	.	+	.	Name=Ear_row_number;B73v2_pos=7:162946848;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171968974	171969073	.	+	.	Name=Stalk_strength;B73v2_pos=7:162952163;1allele=T/G;version=Hapmap2;RS=rs819279156;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	171969252	171969351	.	+	.	Name=Stalk_strength;B73v2_pos=7:162952441;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	171970504	171970603	.	+	.	Name=Stalk_strength;B73v2_pos=7:162953693;1allele=-/+;version=Hapmap2;RS=rs840222598;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	171979195	171979294	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162962384;1allele=C/A;version=Hapmap2;RS=rs827573154;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	171982967	171983066	.	+	.	Name=Stalk_strength;B73v2_pos=7:162966154;1allele=G/A;version=Hapmap2;RS=rs804854325;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	172000249	172000348	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162983435;1allele=G/A;version=Hapmap1;RS=rs132432091;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	172000395	172000494	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162983581;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	172002938	172003037	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162986123;1allele=A/C;version=Hapmap2;RS=rs821465673;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	172003507	172003606	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162986692;1allele=A/G;version=Hapmap2;RS=rs837211101;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	172004392	172004491	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162987577;1allele=A/G;version=Hapmap2;RS=rs802274276;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	172005730	172005829	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:162988915;1allele=C/A;version=Hapmap1;RS=rs132432156;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	172057179	172057278	.	+	.	Name=Height_above_ear;B73v2_pos=7:162996256;1allele=T/C;version=Hapmap1;RS=rs132432226;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	172060320	172060419	.	+	.	Name=Stalk_strength;B73v2_pos=7:162999397;1allele=A/G;version=Hapmap2;RS=rs821317770;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	172070619	172070718	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163009696;1allele=G/A;version=Hapmap2;RS=rs818521450;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	172074971	172075070	.	+	.	Name=Stalk_strength;B73v2_pos=7:163014048;1allele=T/C;version=Hapmap2;RS=rs810883944;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	172077566	172077665	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163016643;1allele=C/G;version=Hapmap2;RS=rs847897526;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	172088096	172088195	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163026440;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	172107822	172107921	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:163048102;1allele=G/A;version=Hapmap2;RS=rs278405968;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	172110016	172110115	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163050296;1allele=G/C;version=Hapmap2;RS=rs829791222;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	172110677	172110776	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:163050957;1allele=C/A;version=Hapmap2;RS=rs278406007;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	172113454	172113553	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163053734;1allele=A/T;version=Hapmap2;RS=rs827480545;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	172118486	172118585	.	+	.	Name=Stalk_strength;B73v2_pos=7:163058766;1allele=G/A;version=Hapmap1;RS=rs132432380;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	172339205	172339304	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163281036;1allele=G/A;version=Hapmap2;RS=rs808457390;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	172405613	172405712	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163330145;1allele=C/T;version=Hapmap2;RS=rs804629052;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	172454389	172454488	.	+	.	Name=Stalk_strength;B73v2_pos=7:163380802;1allele=A/T;version=Hapmap2;RS=rs803873537;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	172501945	172502044	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163428355;1allele=T/C;version=Hapmap2;RS=rs809193527;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	172518062	172518161	.	+	.	Name=Leaf_length;B73v2_pos=7:163456528;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	172521840	172521939	.	+	.	Name=Cob_diameter;B73v2_pos=7:163452750;1allele=C/A;version=Hapmap2;RS=rs725423658;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	172589558	172589657	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163486724;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	172635529	172635628	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:163546273;1allele=C/A;version=Hapmap2;RS=rs818808874;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	172664237	172664336	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:163574984;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	172694376	172694475	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:163604882;1allele=A/G;version=Hapmap2;RS=rs278406887;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	172698494	172698593	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:163609000;1allele=G/C;version=Hapmap1;RS=rs132432753;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	172703576	172703675	.	+	.	Name=Ear_row_number;B73v2_pos=7:163614088;1allele=T/C;version=Hapmap2;RS=rs1061272814;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	172736692	172736791	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:163650966;1allele=C/T;version=Hapmap2;RS=rs803745315;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	172736702	172736801	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:163650976;1allele=C/T;version=Hapmap2;RS=rs833751116;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	172757102	172757201	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:163671377;1allele=A/G;version=Hapmap2;RS=rs132432840;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	172760861	172760960	.	+	.	Name=Ear_row_number;B73v2_pos=7:163675134;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	172794084	172794183	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:163708361;1allele=C/T;version=Hapmap2;RS=rs278407082;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	172795317	172795416	.	+	.	Name=Ear_row_number;B73v2_pos=7:163709594;1allele=A/T;version=Hapmap2;RS=rs278407102;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	172872021	172872120	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:163794178;1allele=A/G;version=Hapmap2;RS=rs132433056;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	172872043	172872142	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:163794200;1allele=T/C;version=Hapmap1;RS=rs132433057;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	172944940	172945039	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:163863863;1allele=C/T;version=Hapmap2;RS=rs811490010;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173001794	173001893	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:163916937;1allele=G/A;version=Hapmap2;RS=rs130680522;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	173019302	173019401	.	+	.	Name=Glucose;B73v2_pos=7:163934441;1allele=G/C;version=Hapmap2;RS=rs813728401;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	173049920	173050019	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:163961192;1allele=C/G;version=Hapmap2;RS=rs842748831;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	173059774	173059873	.	+	.	Name=Tassel_length;B73v2_pos=7:163963594;1allele=T/C;version=Hapmap2;RS=rs132433087;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	173060447	173060546	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:163964267;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173188771	173188870	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:164081387;1allele=A/G;version=Hapmap2;RS=rs132433515;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	173290138	173290237	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:164197323;1allele=C/A;version=Hapmap2;RS=rs820097007;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	173290288	173290387	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164197473;1allele=/TCACAG;version=Hapmap1;RS=rs811625508;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	173290697	173290796	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164197882;1allele=G/T;version=Hapmap2;RS=rs132433732;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	173291195	173291294	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164198380;1allele=A/G;version=Hapmap2;RS=rs278407838;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	173341907	173342006	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:164249241;1allele=A/C;version=Hapmap2;RS=rs833948966;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	173342253	173342352	.	+	.	Name=Fumarate;B73v2_pos=7:164249587;1allele=G/A;version=Hapmap2;RS=rs130680853;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	173569686	173569785	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:164456171;1allele=A/G;version=Hapmap2;RS=rs820717859;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	173662827	173662926	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:164571904;1allele=C/T;version=Hapmap2;RS=rs130681039;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	173669865	173669964	.	+	.	Name=Fumarate;B73v2_pos=7:164563741;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173722182	173722281	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:164609618;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173725579	173725678	.	+	.	Name=Ear_row_number;B73v2_pos=7:164613015;1allele=T/C;version=Hapmap2;RS=rs818677536;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173736571	173736670	.	+	.	Name=Ear_row_number;B73v2_pos=7:164632926;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173739493	173739592	.	+	.	Name=Ear_row_number;B73v2_pos=7:164630004;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173746517	173746616	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:164622980;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173749505	173749604	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:164619992;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173767201	173767300	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:164652210;1allele=G/T;version=Hapmap1;RS=rs132434103;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	173767640	173767739	.	+	.	Name=Ear_row_number;B73v2_pos=7:164652649;1allele=/CAAACT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	173771707	173771806	.	+	.	Name=Ear_row_number;B73v2_pos=7:164656716;1allele=C/A;version=Hapmap2;RS=rs278408415;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	173772203	173772302	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164657212;1allele=T/C;version=Hapmap2;RS=rs130681265;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173773607	173773706	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164658616;1allele=T/C;version=Hapmap1;RS=rs132434151;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	173774829	173774928	.	+	.	Name=Ear_row_number;B73v2_pos=7:164659838;1allele=T/C;version=Hapmap2;RS=rs278408437;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173775400	173775499	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164660410;1allele=A/G;version=Hapmap2;RS=rs278408442;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	173775581	173775680	.	+	.	Name=Ear_row_number;B73v2_pos=7:164660591;1allele=C/G;version=Hapmap2;RS=rs278408444;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	173776535	173776634	.	+	.	Name=Ear_row_number;B73v2_pos=7:164661544;1allele=A/C;version=Hapmap1;RS=rs726675912;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	173776570	173776669	.	+	.	Name=Ear_row_number;B73v2_pos=7:164661579;1allele=T/G;version=Hapmap1;RS=rs132434178;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	173778170	173778269	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164663179;1allele=A/C;version=Hapmap2;RS=rs278408453;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	173778768	173778867	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:164663777;1allele=T/C;version=Hapmap2;RS=rs824247485;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173779913	173780012	.	+	.	Name=Ear_row_number;B73v2_pos=7:164664922;1allele=C/T;version=Hapmap2;RS=rs278408460;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	173780310	173780409	.	+	.	Name=Ear_row_number;B73v2_pos=7:164665319;1allele=T/G;version=Hapmap2;RS=rs278408466;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	173780881	173780980	.	+	.	Name=Ear_row_number;B73v2_pos=7:164665890;1allele=C/T;version=Hapmap2;RS=rs278408472;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	173812030	173812129	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:164697041;1allele=C/A;version=Hapmap2;RS=rs278408595;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	173844159	173844258	.	+	.	Name=Height_above_ear;B73v2_pos=7:164728429;1allele=C/A;version=Hapmap2;RS=rs130681408;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173868544	173868643	.	+	.	Name=Cob_diameter;B73v2_pos=7:164752815;1allele=T/C;version=Hapmap1;RS=rs726796388;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	173870974	173871073	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:164755245;1allele=C/T;version=Hapmap2;RS=rs825580230;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173870974	173871073	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:164755245;1allele=C/T;version=Hapmap2;RS=rs825580230;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	173911643	173911742	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:164795895;1allele=G/A;version=Hapmap2;RS=rs807568592;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	173937490	173937589	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:164828199;1allele=T/C;version=Hapmap2;RS=rs727168787;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	174026329	174026428	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:164908866;1allele=C/T;version=Hapmap2;RS=rs821586119;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174066917	174067016	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:164946894;1allele=A/T;version=Hapmap2;RS=rs836691014;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	174077886	174077985	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:164957864;1allele=A/G;version=Hapmap2;RS=rs130681786;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174112484	174112583	.	+	.	Name=Tassel_length;B73v2_pos=7:164991494;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174132441	174132540	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:165011452;1allele=G/T;version=Hapmap2;RS=rs838098984;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	174143890	174143989	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:165022901;1allele=C/G;version=Hapmap2;RS=rs278409101;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	174244698	174244797	.	+	.	Name=Stalk_strength;B73v2_pos=7:165125088;1allele=C/T;version=Hapmap2;RS=rs828556223;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174279320	174279419	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:165159711;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174279333	174279432	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:165159724;1allele=A/G;version=Hapmap2;RS=rs826811506;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174279675	174279774	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:165160066;1allele=C/G;version=Hapmap2;RS=rs130682298;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	174329621	174329720	.	+	.	Name=Cob_diameter;B73v2_pos=7:165204855;1allele=A/G;version=Hapmap2;RS=rs811524877;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174329750	174329849	.	+	.	Name=Cob_diameter;B73v2_pos=7:165204984;1allele=T/G;version=Hapmap1;RS=rs130682371;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	174330205	174330304	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165205439;1allele=G/C;version=Hapmap1;RS=rs132435198;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	174349597	174349696	.	+	.	Name=Stalk_strength;B73v2_pos=7:165225855;1allele=G/A;version=Hapmap2;RS=rs837215018;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174367022	174367121	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:165243279;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174370485	174370584	.	+	.	Name=Ear_row_number;B73v2_pos=7:165246742;1allele=C/A;version=Hapmap1;RS=rs132435254;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	174381629	174381728	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165257886;1allele=G/A;version=Hapmap2;RS=rs804132198;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174416870	174416969	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:165297005;1allele=C/G;version=Hapmap2;RS=rs843753699;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	174419662	174419761	.	+	.	Name=Cob_diameter;B73v2_pos=7:165299777;1allele=G/T;version=Hapmap2;RS=rs132435440;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	174422022	174422121	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165302137;1allele=/AC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174429451	174429550	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:165309565;1allele=T/C;version=Hapmap2;RS=rs278409841;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174436978	174437077	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:165316155;1allele=T/C;version=Hapmap2;RS=rs1061995808;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174438697	174438796	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:165317874;1allele=T/C;version=Hapmap2;RS=rs821084340;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	174481038	174481137	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:165360381;1allele=C/G;version=Hapmap1;RS=rs132435677;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174495151	174495250	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:165373838;1allele=A/G;version=Hapmap2;RS=rs278409993;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174495231	174495330	.	+	.	Name=Tassel_length;B73v2_pos=7:165373918;1allele=C/A;version=Hapmap2;RS=rs130682614;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	174495487	174495586	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:165374174;1allele=T/A;version=Hapmap1;RS=rs132435715;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	174510342	174510441	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165389009;1allele=T/C;version=Hapmap2;RS=rs130682696;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174526793	174526892	.	+	.	Name=Ear_height;B73v2_pos=7:165405128;1allele=C/T;version=Hapmap2;RS=rs809355565;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174579986	174580085	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:165455554;1allele=C/G;version=Hapmap2;RS=rs815280157;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	174582525	174582624	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165458093;1allele=A/C;version=Hapmap2;RS=rs130682874;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	174584985	174585084	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:165460553;1allele=G/C;version=Hapmap2;RS=rs841970832;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	174592189	174592288	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165465654;1allele=C/T;version=Hapmap2;RS=rs278410299;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174596651	174596750	.	+	.	Name=Tassel_length;B73v2_pos=7:165470214;1allele=A/G;version=Hapmap1;RS=rs132435902;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174601129	174601228	.	+	.	Name=Tassel_length;B73v2_pos=7:165474693;1allele=C/T;version=Hapmap1;RS=rs132435983;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174624760	174624859	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:165498327;1allele=T/A;version=Hapmap2;RS=rs809268020;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	174630810	174630909	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:165504377;1allele=A/T;version=Hapmap2;RS=rs130682997;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	174635024	174635123	.	+	.	Name=Ear_row_number;B73v2_pos=7:165508591;1allele=A/G;version=Hapmap2;RS=rs278410403;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174635127	174635226	.	+	.	Name=Ear_row_number;B73v2_pos=7:165508694;1allele=G/A;version=Hapmap2;RS=rs278410409;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174635665	174635764	.	+	.	Name=Ear_row_number;B73v2_pos=7:165509232;1allele=C/T;version=Hapmap2;RS=rs130683027;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174635967	174636066	.	+	.	Name=Ear_row_number;B73v2_pos=7:165509534;1allele=A/G;version=Hapmap2;RS=rs278410422;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174660186	174660285	.	+	.	Name=Cob_diameter;B73v2_pos=7:165535755;1allele=T/C;version=Hapmap2;RS=rs812680900;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	174701868	174701967	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165572400;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174702534	174702633	.	+	.	Name=Ear_row_number;B73v2_pos=7:165573067;1allele=C/T;version=Hapmap2;RS=rs278410547;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	174702549	174702648	.	+	.	Name=Ear_row_number;B73v2_pos=7:165573082;1allele=G/T;version=Hapmap2;RS=rs278410548;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	174702605	174702704	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165573138;1allele=A/G;version=Hapmap2;RS=rs132436070;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174702943	174703042	.	+	.	Name=Ear_row_number;B73v2_pos=7:165573476;1allele=A/G;version=Hapmap2;RS=rs278410560;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174711743	174711842	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165582186;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174716919	174717018	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165587362;1allele=A/G;version=Hapmap1;RS=rs132436118;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174785778	174785877	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:165679677;1allele=T/A;version=Hapmap2;RS=rs804060004;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	174787295	174787394	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:165681194;1allele=A/G;version=Hapmap2;RS=rs843967533;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	174828418	174828517	.	+	.	Name=Ear_row_number;B73v2_pos=7:165722608;1allele=A/G;version=Hapmap2;RS=rs132436257;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174829408	174829507	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:165723598;1allele=C/T;version=Hapmap2;RS=rs823519246;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	174841546	174841645	.	+	.	Name=Ear_row_number;B73v2_pos=7:165735593;1allele=C/T;version=Hapmap1;RS=rs278410684;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174841660	174841759	.	+	.	Name=Tassel_length;B73v2_pos=7:165735707;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174841802	174841901	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:165735849;1allele=C/G;version=Hapmap2;RS=rs802007739;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	174852052	174852151	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165746079;1allele=C/A;version=Hapmap2;RS=rs278410703;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	174857482	174857581	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:165751509;1allele=G/A;version=Hapmap2;RS=rs278410717;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174860596	174860695	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:165754623;1allele=T/A;version=Hapmap2;RS=rs130683298;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	174881648	174881747	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:165775996;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174887511	174887610	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165781712;1allele=G/A;version=Hapmap2;RS=rs823795716;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	174905750	174905849	.	+	.	Name=Leaf_width;B73v2_pos=7:165804566;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174909194	174909293	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165801207;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174923557	174923656	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:165815714;1allele=C/G;version=Hapmap2;RS=rs825388372;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	174974034	174974133	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165850584;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174975838	174975937	.	+	.	Name=Ear_row_number;B73v2_pos=7:165848780;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174982058	174982157	.	+	.	Name=Height_above_ear;B73v2_pos=7:165842560;1allele=+/-;version=Hapmap2;RS=rs815616320;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	174983152	174983251	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:165841466;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	174984358	174984457	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:165840260;1allele=/CGGG;version=Hapmap1;RS=rs132436826;2ref_allele=C;3alt_allele=CC
chr7	Wallace_2014	SNP	174988052	174988151	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=7:165836566;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	175479286	175479385	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166368459;1allele=G/C;version=Hapmap2;RS=rs278411633;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	175480436	175480535	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166369609;1allele=C/G;version=Hapmap2;RS=rs843900831;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	175480825	175480924	.	+	.	Name=Nodes_per_plant;B73v2_pos=7:166369998;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	175662856	175662955	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166548286;1allele=A/G;version=Hapmap2;RS=rs132437527;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	175663287	175663386	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166548717;1allele=G/T;version=Hapmap2;RS=rs131181089;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	175670697	175670796	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166556127;1allele=G/A;version=Hapmap2;RS=rs132437653;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	175676307	175676406	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166561737;1allele=A/G;version=Hapmap1;RS=rs132437717;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	175804399	175804498	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166668176;1allele=C/T;version=Hapmap2;RS=rs825183270;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	175804579	175804678	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166668356;1allele=G/C;version=Hapmap2;RS=rs833521119;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	175806112	175806211	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166669889;1allele=A/G;version=Hapmap2;RS=rs132437975;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	175818946	175819045	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:166679862;1allele=G/A;version=Hapmap2;RS=rs842746350;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	175837701	175837800	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166697541;1allele=T/G;version=Hapmap2;RS=rs278412103;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	175859572	175859671	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:166733553;1allele=A/T;version=Hapmap2;RS=rs837698187;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	175860177	175860276	.	+	.	Name=Leaf_length;B73v2_pos=7:166734158;1allele=A/G;version=Hapmap1;RS=rs835198290;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	175868094	175868193	.	+	.	Name=Leaf_width;B73v2_pos=7:166742076;1allele=A/C;version=Hapmap2;RS=rs847201301;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	175879112	175879211	.	+	.	Name=Tassel_length;B73v2_pos=7:166753094;1allele=A/G;version=Hapmap1;RS=rs132438077;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	175880164	175880263	.	+	.	Name=Tassel_length;B73v2_pos=7:166754146;1allele=G/A;version=Hapmap2;RS=rs132438093;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	175883957	175884056	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:166758013;1allele=T/A;version=Hapmap2;RS=rs132438130;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	175883969	175884068	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:166758025;1allele=C/T;version=Hapmap2;RS=rs278412363;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	175988753	175988852	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166862504;1allele=G/A;version=Hapmap2;RS=rs724372374;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	175989962	175990061	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166863713;1allele=C/A;version=Hapmap2;RS=rs278412426;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	176043009	176043108	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:166985653;1allele=CA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	176076315	176076414	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:166960640;1allele=G/T;version=Hapmap2;RS=rs278412471;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	176127244	176127343	.	+	.	Name=Tassel_length;B73v2_pos=7:167021392;1allele=G/A;version=Hapmap1;RS=rs727348716;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	176209561	176209660	.	+	.	Name=Tassel_length;B73v2_pos=7:167102223;1allele=C/T;version=Hapmap2;RS=rs837039606;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	176254002	176254101	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:167145149;1allele=A/C;version=Hapmap2;RS=rs130684751;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	176254203	176254302	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:167145350;1allele=T/C;version=Hapmap2;RS=rs278412771;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	176258690	176258789	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:167149837;1allele=G/T;version=Hapmap2;RS=rs130684805;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	176288567	176288666	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:167180263;1allele=G/A;version=Hapmap2;RS=rs841454141;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	176325874	176325973	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=7:167217569;1allele=G/T;version=Hapmap2;RS=rs132438941;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	176414242	176414341	.	+	.	Name=Tassel_length;B73v2_pos=7:167349263;1allele=C/T;version=Hapmap2;RS=rs836121108;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	176586094	176586193	.	+	.	Name=Days_to_silk;B73v2_pos=7:167505601;1allele=G/A;version=Hapmap2;RS=rs842656334;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	176662788	176662887	.	+	.	Name=Height_above_ear;B73v2_pos=7:167606888;1allele=G/A;version=Hapmap2;RS=rs278413268;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	176685187	176685286	.	+	.	Name=Tassel_length;B73v2_pos=7:167629247;1allele=C/A;version=Hapmap2;RS=rs837213799;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	176685254	176685353	.	+	.	Name=Tassel_length;B73v2_pos=7:167629314;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	176689976	176690075	.	+	.	Name=Leaf_length;B73v2_pos=7:167634032;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	176690287	176690386	.	+	.	Name=Ear_row_number;B73v2_pos=7:167634343;1allele=A/T;version=Hapmap2;RS=rs132439638;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	176696920	176697019	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:167640977;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	176766452	176766551	.	+	.	Name=Ear_row_number;B73v2_pos=7:167713044;1allele=A/G;version=Hapmap2;RS=rs130685372;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	176865358	176865457	.	+	.	Name=Height_above_ear;B73v2_pos=7:167810950;1allele=GAGAAC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	176867271	176867370	.	+	.	Name=Height_above_ear;B73v2_pos=7:167812863;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	177031137	177031236	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:167976332;1allele=A/G;version=Hapmap2;RS=rs132440501;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	177120782	177120881	.	+	.	Name=Tassel_length;B73v2_pos=7:168081486;1allele=C/T;version=Hapmap2;RS=rs831851010;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177129716	177129815	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:168090420;1allele=G/C;version=Hapmap2;RS=rs726109181;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	177129759	177129858	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168090463;1allele=T/C;version=Hapmap2;RS=rs278414569;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177156016	177156115	.	+	.	Name=Height_above_ear;B73v2_pos=7:168105752;1allele=A/T;version=Hapmap2;RS=rs819495719;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	177157031	177157130	.	+	.	Name=Ear_row_number;B73v2_pos=7:168106767;1allele=A/T;version=Hapmap2;RS=rs278414631;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	177298299	177298398	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:168243345;1allele=C/T;version=Hapmap1;RS=rs806794358;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177305445	177305544	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168250491;1allele=A/G;version=Hapmap2;RS=rs819698491;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	177328910	177329009	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:168273966;1allele=A/T;version=Hapmap2;RS=rs1060807888;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	177331309	177331408	.	+	.	Name=Ear_row_number;B73v2_pos=7:168167971;1allele=/TGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	177417099	177417198	.	+	.	Name=Stalk_strength;B73v2_pos=7:168356852;1allele=G/A;version=Hapmap2;RS=rs809592717;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	177437338	177437437	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168387629;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	177440475	177440574	.	+	.	Name=Height_above_ear;B73v2_pos=7:168390765;1allele=C/T;version=Hapmap2;RS=rs817143195;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177459237	177459336	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:168409218;1allele=C/G;version=Hapmap2;RS=rs726002635;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	177460662	177460761	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:168410643;1allele=C/T;version=Hapmap2;RS=rs829533403;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177490586	177490685	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:168455939;1allele=A/G;version=Hapmap2;RS=rs130686773;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	177503458	177503557	.	+	.	Name=Days_to_silk;B73v2_pos=7:168468727;1allele=C/T;version=Hapmap2;RS=rs801846297;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177666040	177666139	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:168639364;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	177666074	177666173	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:168639330;1allele=T/C;version=Hapmap2;RS=rs278415460;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	177671464	177671563	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:168611316;1allele=A/G;version=Hapmap2;RS=rs827900596;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	177672040	177672139	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:168611892;1allele=C/T;version=Hapmap2;RS=rs805591747;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177702187	177702286	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:168653639;1allele=T/C;version=Hapmap1;RS=rs132441989;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	177835657	177835756	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168786788;1allele=C/G;version=Hapmap1;RS=rs132442190;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	177839216	177839315	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168790347;1allele=C/T;version=Hapmap2;RS=rs817515718;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177839490	177839589	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168790621;1allele=C/T;version=Hapmap2;RS=rs818355236;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177862273	177862372	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:168813394;1allele=C/T;version=Hapmap2;RS=rs836312499;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	177911405	177911504	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:168874972;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	177921487	177921586	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168864890;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	177921980	177922079	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:168864397;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178057834	178057933	.	+	.	Name=Height_above_ear;B73v2_pos=7:168994619;1allele=C/G;version=Hapmap1;RS=rs130687569;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	178058050	178058149	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:168994835;1allele=C/A;version=Hapmap2;RS=rs834831660;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	178058050	178058149	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:168994835;1allele=C/A;version=Hapmap2;RS=rs834831660;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	178079831	178079930	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:169016616;1allele=C/T;version=Hapmap2;RS=rs843315792;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	178081374	178081473	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:169018159;1allele=C/T;version=Hapmap2;RS=rs842492718;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	178081466	178081565	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:169018251;1allele=T/C;version=Hapmap2;RS=rs828241141;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	178094319	178094418	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:169031101;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178095773	178095872	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:169032555;1allele=G/A;version=Hapmap2;RS=rs726967206;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	178113018	178113117	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:169049798;1allele=A/C;version=Hapmap2;RS=rs802786559;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	178132181	178132280	.	+	.	Name=Leaf_length;B73v2_pos=7:169068961;1allele=A/C;version=Hapmap1;RS=rs132442426;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	178138675	178138774	.	+	.	Name=Leaf_length;B73v2_pos=7:169075455;1allele=A/G;version=Hapmap2;RS=rs278416265;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178169356	178169455	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:169130307;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178188713	178188812	.	+	.	Name=Leaf_length;B73v2_pos=7:169121507;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178201842	178201941	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:169170644;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178203614	178203713	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:169168872;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178255340	178255439	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:169161458;1allele=C/T;version=Hapmap2;RS=rs837968766;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	178277967	178278066	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:169202112;1allele=T/A;version=Hapmap2;RS=rs278416557;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	178277999	178278098	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:169202144;1allele=G/A;version=Hapmap2;RS=rs278416558;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178281316	178281415	.	+	.	Name=Tassel_length;B73v2_pos=7:169205461;1allele=A/G;version=Hapmap2;RS=rs278416592;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178328374	178328473	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:169252426;1allele=A/C;version=Hapmap2;RS=rs815704293;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	178342777	178342876	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:169266829;1allele=T/C;version=Hapmap1;RS=rs802311678;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178390168	178390267	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:169323073;1allele=C/T;version=Hapmap2;RS=rs833858500;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	178399691	178399790	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:169332599;1allele=A/G;version=Hapmap2;RS=rs278416802;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178402272	178402371	.	+	.	Name=Height_above_ear;B73v2_pos=7:169335180;1allele=+/-;version=Hapmap2;RS=rs818041337;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178402295	178402394	.	+	.	Name=Height_above_ear;B73v2_pos=7:169335203;1allele=C/T;version=Hapmap2;RS=rs847230470;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	178478079	178478178	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:169410835;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178509029	178509128	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:169443282;1allele=G/C;version=Hapmap2;RS=rs850310226;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	178540857	178540956	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:169475229;1allele=C/T;version=Hapmap2;RS=rs828945442;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	178602487	178602586	.	+	.	Name=Ear_row_number;B73v2_pos=7:169534793;1allele=G/A;version=Hapmap1;RS=rs132443106;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	178645100	178645199	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:169577875;1allele=C/A;version=Hapmap2;RS=rs278417207;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	178653602	178653701	.	+	.	Name=Height_above_ear;B73v2_pos=7:169586329;1allele=G/A;version=Hapmap1;RS=rs130688313;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	178656174	178656273	.	+	.	Name=Ear_row_number;B73v2_pos=7:169588901;1allele=T/A;version=Hapmap2;RS=rs130688321;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	178725581	178725680	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:169656099;1allele=C/G;version=Hapmap2;RS=rs841455038;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	178742471	178742570	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:169663546;1allele=G/A;version=Hapmap2;RS=rs810800946;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	178837690	178837789	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:169849771;1allele=A/G;version=Hapmap2;RS=rs831087774;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178848218	178848317	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:169860223;1allele=A/G;version=Hapmap2;RS=rs835104722;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178857842	178857941	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:169869847;1allele=A/G;version=Hapmap2;RS=rs130688663;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	178866364	178866463	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=7:169878372;1allele=TT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178866678	178866777	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:169878686;1allele=G/C;version=Hapmap2;RS=rs130688704;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	178866901	178867000	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:169878909;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	178917263	178917362	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:169804812;1allele=G/A;version=Hapmap2;RS=rs847313642;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	179056684	179056783	.	+	.	Name=Leaf_width;B73v2_pos=7:169970826;1allele=C/T;version=Hapmap2;RS=rs841450958;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	179105114	179105213	.	+	.	Name=Leaf_width;B73v2_pos=7:170019210;1allele=T/C;version=Hapmap2;RS=rs1061187213;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	179120233	179120332	.	+	.	Name=Leaf_width;B73v2_pos=7:170034329;1allele=C/A;version=Hapmap1;RS=rs132443518;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	179121192	179121291	.	+	.	Name=Leaf_width;B73v2_pos=7:170035288;1allele=G/A;version=Hapmap2;RS=rs830600053;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	179121978	179122077	.	+	.	Name=Leaf_width;B73v2_pos=7:170036074;1allele=C/T;version=Hapmap2;RS=rs841435246;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	179123598	179123697	.	+	.	Name=Leaf_width;B73v2_pos=7:170037694;1allele=A/G;version=Hapmap2;RS=rs725922175;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	179157676	179157775	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:170069861;1allele=A/C;version=Hapmap2;RS=rs726240392;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	179349971	179350070	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:170262551;1allele=G/A;version=Hapmap2;RS=rs848478859;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	179387667	179387766	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:170300057;1allele=T/C;version=Hapmap2;RS=rs831710897;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	179395486	179395585	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:170317343;1allele=T/C;version=Hapmap2;RS=rs1061858069;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	179463742	179463841	.	+	.	Name=Leaf_width;B73v2_pos=7:170369833;1allele=G/T;version=Hapmap2;RS=rs825306397;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	179484678	179484777	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170390605;1allele=G/A;version=Hapmap2;RS=rs841889530;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	179489692	179489791	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170395619;1allele=A/C;version=Hapmap2;RS=rs825413063;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	179493537	179493636	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170399464;1allele=T/A;version=Hapmap1;RS=rs132443948;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	179493598	179493697	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170399525;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179496615	179496714	.	+	.	Name=Leaf_length;B73v2_pos=7:170402542;1allele=T/C;version=Hapmap2;RS=rs810461953;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	179537703	179537802	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170439120;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179538705	179538804	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170438120;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179538885	179538984	.	+	.	Name=Starch;B73v2_pos=7:170437940;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179539353	179539452	.	+	.	Name=Leaf_width;B73v2_pos=7:170437472;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179556957	179557056	.	+	.	Name=Malate;B73v2_pos=7:170419868;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179562052	179562151	.	+	.	Name=Leaf_width;B73v2_pos=7:170414773;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179664926	179665025	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170555948;1allele=A/C;version=Hapmap2;RS=rs726711234;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	179672287	179672386	.	+	.	Name=Leaf_length;B73v2_pos=7:170563309;1allele=A/T;version=Hapmap2;RS=rs807064948;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	179678840	179678939	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170569862;1allele=A/G;version=Hapmap2;RS=rs819382928;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	179680838	179680937	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170571861;1allele=A/G;version=Hapmap2;RS=rs806394126;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	179754345	179754444	.	+	.	Name=Leaf_length;B73v2_pos=7:170645376;1allele=C/A;version=Hapmap2;RS=rs840690379;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	179758331	179758430	.	+	.	Name=Days_to_silk;B73v2_pos=7:170649362;1allele=C/T;version=Hapmap2;RS=rs826851057;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	179760040	179760139	.	+	.	Name=Leaf_length;B73v2_pos=7:170651071;1allele=G/A;version=Hapmap2;RS=rs811639195;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	179761552	179761651	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170652583;1allele=G/A;version=Hapmap2;RS=rs130690249;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	179765628	179765727	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:170656659;1allele=G/A;version=Hapmap1;RS=rs727491815;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	179768707	179768806	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:170659738;1allele=G/A;version=Hapmap2;RS=rs840104162;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	179769031	179769130	.	+	.	Name=Leaf_length;B73v2_pos=7:170660062;1allele=A/T;version=Hapmap2;RS=rs840066010;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	179769104	179769203	.	+	.	Name=Leaf_length;B73v2_pos=7:170660135;1allele=A/G;version=Hapmap2;RS=rs819590101;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	179772374	179772473	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:170663405;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	179772659	179772758	.	+	.	Name=Leaf_width;B73v2_pos=7:170663690;1allele=A/G;version=Hapmap2;RS=rs819229708;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	179775447	179775546	.	+	.	Name=Leaf_length;B73v2_pos=7:170666478;1allele=C/G;version=Hapmap1;RS=rs130690329;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	179780195	179780294	.	+	.	Name=Leaf_length;B73v2_pos=7:170671226;1allele=G/T;version=Hapmap1;RS=rs132444563;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	179782368	179782467	.	+	.	Name=Leaf_length;B73v2_pos=7:170673399;1allele=T/C;version=Hapmap2;RS=rs130690360;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	179950252	179950351	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:170835650;1allele=T/C;version=Hapmap1;RS=rs132444748;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	179971130	179971229	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:170856528;1allele=C/T;version=Hapmap2;RS=rs835080456;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	179974123	179974222	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:170859521;1allele=C/A;version=Hapmap2;RS=rs812516900;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	180013264	180013363	.	+	.	Name=Ear_row_number;B73v2_pos=7:170872120;1allele=C/T;version=Hapmap2;RS=rs130690641;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	180071492	180071591	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:170954636;1allele=T/A;version=Hapmap2;RS=rs809632105;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	180092167	180092266	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:170975309;1allele=G/T;version=Hapmap2;RS=rs839134813;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	180097111	180097210	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:170980251;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180098577	180098676	.	+	.	Name=Malate;B73v2_pos=7:170981717;1allele=A/G;version=Hapmap2;RS=rs130690998;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	180105856	180105955	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:170988996;1allele=G/A;version=Hapmap2;RS=rs825973205;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	180118629	180118728	.	+	.	Name=Malate;B73v2_pos=7:171001769;1allele=T/C;version=Hapmap2;RS=rs726799280;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	180122729	180122828	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:171005869;1allele=C/T;version=Hapmap2;RS=rs843319940;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	180140521	180140620	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:171014158;1allele=A/C;version=Hapmap2;RS=rs820849165;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	180141433	180141532	.	+	.	Name=Malate;B73v2_pos=7:171015070;1allele=T/A;version=Hapmap2;RS=rs278419803;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	180154031	180154130	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:171034336;1allele=G/C;version=Hapmap2;RS=rs836406511;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	180196475	180196574	.	+	.	Name=Days_to_silk;B73v2_pos=6:29625829;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180308406	180308505	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:171185454;1allele=G/A;version=Hapmap2;RS=rs1063103645;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	180315052	180315151	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:171192096;1allele=C/T;version=Hapmap2;RS=rs841859385;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	180377319	180377418	.	+	.	Name=Malate;B73v2_pos=7:171254888;1allele=G/A;version=Hapmap2;RS=rs130691699;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	180465853	180465952	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:171344074;1allele=T/C;version=Hapmap2;RS=rs829890661;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	180466003	180466102	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:171344224;1allele=T/G;version=Hapmap2;RS=rs825314829;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	180475038	180475137	.	+	.	Name=Leaf_width;B73v2_pos=7:171353259;1allele=C/T;version=Hapmap2;RS=rs725026450;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	180481966	180482065	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:171360187;1allele=C/A;version=Hapmap1;RS=rs132445555;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	180598359	180598458	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:171467211;1allele=G/A;version=Hapmap2;RS=rs819468878;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	180612807	180612906	.	+	.	Name=Leaf_width;B73v2_pos=7:171481662;1allele=A/T;version=Hapmap2;RS=rs278420554;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	180622539	180622638	.	+	.	Name=Malate;B73v2_pos=7:171539320;1allele=T/C;version=Hapmap2;RS=rs803065653;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	180638166	180638265	.	+	.	Name=Days_to_silk;B73v2_pos=7:171500248;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180640892	180640991	.	+	.	Name=Malate;B73v2_pos=7:171497522;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180641680	180641779	.	+	.	Name=Malate;B73v2_pos=7:171496734;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180687524	180687623	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:171550348;1allele=A/T;version=Hapmap2;RS=rs839807935;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	180687831	180687930	.	+	.	Name=Leaf_width;B73v2_pos=7:171550655;1allele=C/T;version=Hapmap2;RS=rs278420803;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	180691026	180691125	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:171553850;1allele=C/T;version=Hapmap2;RS=rs824375681;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	180712619	180712718	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:171575442;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180712619	180712718	.	+	.	Name=Starch;B73v2_pos=7:171575442;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180713073	180713171	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:171575896;1allele=T/C;version=Hapmap2;RS=rs130692254;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	180713073	180713171	.	+	.	Name=Starch;B73v2_pos=7:171575896;1allele=T/C;version=Hapmap2;RS=rs130692254;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	180728846	180728945	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:171590739;1allele=A/G;version=Hapmap2;RS=rs847521767;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	180765123	180765222	.	+	.	Name=Leaf_length;B73v2_pos=7:171628935;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180765657	180765756	.	+	.	Name=Leaf_length;B73v2_pos=7:171629469;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180824049	180824148	.	+	.	Name=Malate;B73v2_pos=7:171692301;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180838969	180839068	.	+	.	Name=Days_to_silk;B73v2_pos=7:171707220;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180873951	180874050	.	+	.	Name=Leaf_width;B73v2_pos=7:171728686;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180995113	180995212	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:171862832;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180995705	180995804	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:171863424;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180995725	180995824	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:171863444;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180995742	180995841	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:171863461;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	180995780	180995879	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:171863499;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181043590	181043689	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:171825389;1allele=T/C;version=Hapmap2;RS=rs130693063;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	181044606	181044705	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:171824373;1allele=C/T;version=Hapmap2;RS=rs810028603;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	181046512	181046611	.	+	.	Name=Malate;B73v2_pos=7:171822467;1allele=G/A;version=Hapmap2;RS=rs132446186;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	181065186	181065285	.	+	.	Name=Ear_row_number;B73v2_pos=7:171902211;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181092637	181092736	.	+	.	Name=Malate;B73v2_pos=7:171929662;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181123584	181123683	.	+	.	Name=Fumarate;B73v2_pos=7:171959603;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181183799	181183898	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172072247;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181195487	181195586	.	+	.	Name=Malate;B73v2_pos=7:172108242;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181201764	181201863	.	+	.	Name=Malate;B73v2_pos=7:172114516;1allele=T/C;version=Hapmap2;RS=rs848852976;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	181249693	181249792	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:172088316;1allele=A/G;version=Hapmap2;RS=rs825025103;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	181324118	181324217	.	+	.	Name=Fumarate;B73v2_pos=7:172198659;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181329734	181329833	.	+	.	Name=Days_to_silk;B73v2_pos=7:172204275;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181337431	181337530	.	+	.	Name=Malate;B73v2_pos=7:172211972;1allele=+/-;version=Hapmap2;RS=rs817911815;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	181337490	181337589	.	+	.	Name=Malate;B73v2_pos=7:172212031;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181545275	181545374	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172435776;1allele=T/A;version=Hapmap2;RS=rs824187463;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	181545656	181545755	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172436157;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181549252	181549351	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:172439753;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181549470	181549569	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172439971;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181599631	181599730	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:172490413;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181610244	181610343	.	+	.	Name=Glucose;B73v2_pos=7:172501026;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181627010	181627109	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:172517792;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181678219	181678318	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:172569285;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181682856	181682955	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172573922;1allele=G/T;version=Hapmap2;RS=rs278422364;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	181685862	181685961	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172576928;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181690829	181690928	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=7:172581895;1allele=G/A;version=Hapmap2;RS=rs832733876;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	181692840	181692939	.	+	.	Name=Glucose;B73v2_pos=7:172583906;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181728172	181728271	.	+	.	Name=Glucose;B73v2_pos=7:172665825;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181729562	181729661	.	+	.	Name=Glucose;B73v2_pos=7:172667215;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181735685	181735784	.	+	.	Name=Days_to_silk;B73v2_pos=7:172673339;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181777905	181778004	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:172715572;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181780867	181780966	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:172718534;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181783468	181783567	.	+	.	Name=Stalk_strength;B73v2_pos=7:172721061;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181794788	181794887	.	+	.	Name=Leaf_length;B73v2_pos=7:172732381;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181817471	181817570	.	+	.	Name=Ear_height;B73v2_pos=7:172755053;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181832969	181833068	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172769580;1allele=/AGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181864508	181864607	.	+	.	Name=Days_to_silk;B73v2_pos=7:172801120;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181873948	181874047	.	+	.	Name=Malate;B73v2_pos=7:172813437;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181875273	181875372	.	+	.	Name=Leaf_length;B73v2_pos=7:172810836;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181880811	181880910	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:172816283;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181891171	181891270	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:172826643;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181922595	181922694	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172861176;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181923622	181923721	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172862203;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181924646	181924745	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172863227;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181925342	181925441	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172863923;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181925499	181925598	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172864080;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181926392	181926491	.	+	.	Name=Ear_row_number;B73v2_pos=7:172864973;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181929120	181929219	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172868478;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181935783	181935882	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172875144;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181936250	181936349	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172875611;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181937528	181937627	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172876889;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181937549	181937648	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172876910;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181938704	181938803	.	+	.	Name=Malate;B73v2_pos=7:172878065;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181983742	181983841	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172925788;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181990554	181990653	.	+	.	Name=Leaf_width;B73v2_pos=7:172932599;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	181990554	181990653	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:172932599;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182138740	182138839	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173042168;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182153209	182153308	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173056639;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182196791	182196890	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173155233;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182229633	182229732	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:173187769;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182266667	182266766	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173245504;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182271752	182271851	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173250589;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182285730	182285829	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:173679853;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182302153	182302252	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173280993;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182469281	182469380	.	+	.	Name=Ear_height;B73v2_pos=7:173426768;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182484045	182484144	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:173441611;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182485364	182485463	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:173442930;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182487488	182487587	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:173445054;1allele=T/G;version=Hapmap1;RS=rs132449656;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	182563217	182563316	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173513067;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182574916	182575015	.	+	.	Name=Ear_height;B73v2_pos=7:173524766;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182590563	182590662	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=6:153434895;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182605870	182605969	.	+	.	Name=Ear_row_number;B73v2_pos=1:17328103;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182621548	182621647	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:173548935;1allele=C/T;version=Hapmap2;RS=rs839055679;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	182635374	182635473	.	+	.	Name=Starch;B73v2_pos=7:173584201;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182635374	182635473	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:173584201;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182699854	182699953	.	+	.	Name=Starch;B73v2_pos=7:173645807;1allele=A/G;version=Hapmap2;RS=rs821726940;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	182701159	182701258	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:173647112;1allele=T/C;version=Hapmap2;RS=rs840837200;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	182726506	182726605	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173672282;1allele=T/A;version=Hapmap2;RS=rs812080592;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	182734327	182734426	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173738388;1allele=/GT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182801552	182801651	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:173809172;1allele=G/A;version=Hapmap2;RS=rs847582183;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	182801628	182801727	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:173809248;1allele=T/C;version=Hapmap2;RS=rs130696766;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	182803461	182803560	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:173810841;1allele=C/G;version=Hapmap1;RS=rs130696739;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	182814973	182815072	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:173822351;1allele=C/T;version=Hapmap2;RS=rs278424783;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	182877705	182877804	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:173889059;1allele=C/T;version=Hapmap2;RS=rs132450502;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	182880447	182880546	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:173891801;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	182937881	182937980	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:173957039;1allele=T/C;version=Hapmap2;RS=rs130696839;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	182941372	182941471	.	+	.	Name=Stalk_strength;B73v2_pos=7:173960091;1allele=/GTAAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183197184	183197283	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:174224845;1allele=G/A;version=Hapmap2;RS=rs726668889;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	183205995	183206094	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:174233654;1allele=C/T;version=Hapmap2;RS=rs837180162;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183229091	183229190	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:174287927;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183274287	183274378	.	+	.	Name=Glucose;B73v2_pos=7:174268766;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183398771	183398870	.	+	.	Name=Sucrose;B73v2_pos=7:174400832;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183400844	183400943	.	+	.	Name=Starch;B73v2_pos=7:174402905;1allele=G/A;version=Hapmap2;RS=rs822839030;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	183436751	183436850	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:174437986;1allele=A/G;version=Hapmap2;RS=rs130697616;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	183493008	183493107	.	+	.	Name=Stalk_strength;B73v2_pos=7:174495066;1allele=A/C;version=Hapmap2;RS=rs807572780;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	183510650	183510749	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:174512705;1allele=A/G;version=Hapmap2;RS=rs130697735;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	183525815	183525914	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:174527869;1allele=T/A;version=Hapmap2;RS=rs815026760;2ref_allele=T;3alt_allele=A
chr7	Wallace_2014	SNP	183546569	183546668	.	+	.	Name=100_Kernel_weight;B73v2_pos=7:174548567;1allele=T/C;version=Hapmap2;RS=rs838100005;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183565724	183565823	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:174567725;1allele=A/G;version=Hapmap2;RS=rs130698073;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	183570016	183570115	.	+	.	Name=Days_to_silk;B73v2_pos=7:174572017;1allele=C/T;version=Hapmap2;RS=rs811147973;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183570657	183570756	.	+	.	Name=Stalk_strength;B73v2_pos=7:174572661;1allele=C/T;version=Hapmap2;RS=rs848795789;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183571857	183571956	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:174573861;1allele=A/G;version=Hapmap1;RS=rs132451704;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	183572465	183572564	.	+	.	Name=Stalk_strength;B73v2_pos=7:174574469;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183580794	183580893	.	+	.	Name=Stalk_strength;B73v2_pos=7:174582798;1allele=T/C;version=Hapmap2;RS=rs278426513;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183653195	183653294	.	+	.	Name=Stalk_strength;B73v2_pos=7:174655198;1allele=C/T;version=Hapmap2;RS=rs818709987;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183704297	183704396	.	+	.	Name=Stalk_strength;B73v2_pos=7:174705827;1allele=G/T;version=Hapmap2;RS=rs841406521;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	183713114	183713213	.	+	.	Name=Stalk_strength;B73v2_pos=7:174714644;1allele=T/C;version=Hapmap2;RS=rs132451852;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183714847	183714946	.	+	.	Name=Days_to_silk;B73v2_pos=7:174716377;1allele=T/C;version=Hapmap2;RS=rs278426578;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183719523	183719622	.	+	.	Name=Days_to_silk;B73v2_pos=7:174721053;1allele=C/T;version=Hapmap2;RS=rs130698307;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183732072	183732171	.	+	.	Name=Days_to_silk;B73v2_pos=7:174733602;1allele=T/C;version=Hapmap1;RS=rs132451878;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183733286	183733385	.	+	.	Name=Stalk_strength;B73v2_pos=7:174735008;1allele=C/T;version=Hapmap2;RS=rs835755796;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183734450	183734549	.	+	.	Name=Stalk_strength;B73v2_pos=7:174736173;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183734906	183735005	.	+	.	Name=Stalk_strength;B73v2_pos=7:174736629;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183737175	183737274	.	+	.	Name=Days_to_silk;B73v2_pos=7:174737705;1allele=C/T;version=Hapmap2;RS=rs130698386;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183740260	183740359	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:174740790;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	183740695	183740794	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:174741225;1allele=C/T;version=Hapmap1;RS=rs132451894;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183744550	183744649	.	+	.	Name=Days_to_silk;B73v2_pos=7:174745079;1allele=A/G;version=Hapmap2;RS=rs130698474;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	183750864	183750963	.	+	.	Name=Stalk_strength;B73v2_pos=7:174751393;1allele=C/A;version=Hapmap2;RS=rs832524618;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183753973	183754072	.	+	.	Name=Days_to_silk;B73v2_pos=7:174754502;1allele=G/A;version=Hapmap2;RS=rs130698526;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	183753999	183754098	.	+	.	Name=Days_to_silk;B73v2_pos=7:174754528;1allele=A/C;version=Hapmap2;RS=rs278426731;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	183756935	183757034	.	+	.	Name=Days_to_silk;B73v2_pos=7:174757464;1allele=G/T;version=Hapmap2;RS=rs130698550;2ref_allele=T;3alt_allele=G
chr7	Wallace_2014	SNP	183758103	183758202	.	+	.	Name=Days_to_silk;B73v2_pos=7:174758632;1allele=G/A;version=Hapmap2;RS=rs278426738;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	183758396	183758495	.	+	.	Name=Days_to_silk;B73v2_pos=7:174758925;1allele=T/C;version=Hapmap2;RS=rs278426739;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183759808	183759907	.	+	.	Name=Days_to_silk;B73v2_pos=7:174760337;1allele=C/G;version=Hapmap2;RS=rs838100453;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	183759877	183759976	.	+	.	Name=Days_to_silk;B73v2_pos=7:174760406;1allele=G/C;version=Hapmap1;RS=rs130698571;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	183766420	183766519	.	+	.	Name=Days_to_silk;B73v2_pos=7:174766953;1allele=C/T;version=Hapmap2;RS=rs278426761;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183777892	183777991	.	+	.	Name=Stalk_strength;B73v2_pos=7:174778424;1allele=G/T;version=Hapmap2;RS=rs824107503;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	183777906	183778005	.	+	.	Name=Stalk_strength;B73v2_pos=7:174778438;1allele=A/C;version=Hapmap2;RS=rs831402380;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	183779040	183779139	.	+	.	Name=Stalk_strength;B73v2_pos=7:174779572;1allele=A/C;version=Hapmap2;RS=rs725830557;2ref_allele=A;3alt_allele=C
chr7	Wallace_2014	SNP	183983415	183983514	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:174988136;1allele=C/T;version=Hapmap2;RS=rs823025940;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	183992538	183992637	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:174997260;1allele=T/C;version=Hapmap2;RS=rs825730868;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	183993197	183993296	.	+	.	Name=Stalk_strength;B73v2_pos=7:174997919;1allele=C/T;version=Hapmap2;RS=rs848136340;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	184031751	184031850	.	+	.	Name=Leaf_width;B73v2_pos=7:175036041;1allele=G/A;version=Hapmap2;RS=rs278427006;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	184152921	184153020	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:175173707;1allele=G/A;version=Hapmap2;RS=rs132452221;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	184161656	184161755	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:175181720;1allele=G/A;version=Hapmap2;RS=rs278427177;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	184179026	184179125	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175199090;1allele=C/G;version=Hapmap2;RS=rs810358524;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	184179142	184179241	.	+	.	Name=Glucose;B73v2_pos=7:175199206;1allele=G/A;version=Hapmap2;RS=rs829942796;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	184179142	184179241	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=7:175199206;1allele=G/A;version=Hapmap2;RS=rs829942796;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	184180589	184180688	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175200653;1allele=C/T;version=Hapmap1;RS=rs132452345;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	184180605	184180704	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175200669;1allele=G/A;version=Hapmap2;RS=rs278427302;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	184180673	184180772	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175200737;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	184180696	184180795	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175200760;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	184182975	184183074	.	+	.	Name=Glucose;B73v2_pos=7:175203039;1allele=T/C;version=Hapmap2;RS=rs130699183;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	184186809	184186908	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175206869;1allele=G/A;version=Hapmap2;RS=rs132452441;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	184191037	184191136	.	+	.	Name=Days_to_silk;B73v2_pos=7:175211097;1allele=T/A;version=Hapmap2;RS=rs818719622;2ref_allele=A;3alt_allele=T
chr7	Wallace_2014	SNP	184218796	184218895	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175232138;1allele=C/A;version=Hapmap2;RS=rs845368550;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	184218796	184218895	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=7:175232138;1allele=C/A;version=Hapmap2;RS=rs845368550;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	184266455	184266554	.	+	.	Name=Days_to_silk;B73v2_pos=7:175280496;1allele=G/C;version=Hapmap2;RS=rs278427437;2ref_allele=C;3alt_allele=G
chr7	Wallace_2014	SNP	184300878	184300977	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:175314791;1allele=A/G;version=Hapmap2;RS=rs824356969;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	184304737	184304836	.	+	.	Name=Days_to_silk;B73v2_pos=7:175319412;1allele=C/A;version=Hapmap1;RS=rs132452573;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	184329311	184329410	.	+	.	Name=Days_to_silk;B73v2_pos=7:175344206;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	184333494	184333593	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:175348389;1allele=T/C;version=Hapmap2;RS=rs845255131;2ref_allele=T;3alt_allele=C
chr7	Wallace_2014	SNP	184339399	184339498	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:175354294;1allele=A/G;version=Hapmap2;RS=rs803064896;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	184339448	184339547	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:175354343;1allele=C/T;version=Hapmap2;RS=rs841689414;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	184345754	184345853	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:175360659;1allele=C/T;version=Hapmap2;RS=rs816875066;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	184346591	184346690	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:175361496;1allele=C/T;version=Hapmap2;RS=rs820942962;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	184387527	184387626	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175403337;1allele=C/A;version=Hapmap2;RS=rs278427634;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	184525270	184525369	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=7:175535299;1allele=G/A;version=Hapmap2;RS=rs726434440;2ref_allele=G;3alt_allele=A
chr7	Wallace_2014	SNP	184529229	184529328	.	+	.	Name=Stalk_strength;B73v2_pos=7:175539258;1allele=G/C;version=Hapmap1;RS=rs278427819;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	184562658	184562757	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175576625;1allele=T/C;version=Hapmap2;RS=rs278427999;2ref_allele=C;3alt_allele=T
chr7	Wallace_2014	SNP	184564114	184564213	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:175578081;1allele=A/C;version=Hapmap2;RS=rs810915884;2ref_allele=C;3alt_allele=A
chr7	Wallace_2014	SNP	184621143	184621242	.	+	.	Name=Days_to_silk;B73v2_pos=7:175638653;1allele=G/A;version=Hapmap2;RS=rs278428045;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	184661210	184661309	.	+	.	Name=Days_to_silk;B73v2_pos=7:175678072;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr7	Wallace_2014	SNP	184855143	184855242	.	+	.	Name=Stalk_strength;B73v2_pos=7:175848247;1allele=G/C;version=Hapmap2;RS=rs813388156;2ref_allele=G;3alt_allele=C
chr7	Wallace_2014	SNP	184887221	184887320	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:175890284;1allele=G/A;version=Hapmap2;RS=rs130699988;2ref_allele=G;3alt_allele=T
chr7	Wallace_2014	SNP	185156140	185156239	.	+	.	Name=Stalk_strength;B73v2_pos=7:176138497;1allele=A/G;version=Hapmap2;RS=rs822271343;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	185536005	185536104	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:176503705;1allele=A/G;version=Hapmap1;RS=rs132453109;2ref_allele=A;3alt_allele=G
chr7	Wallace_2014	SNP	185552328	185552427	.	+	.	Name=Stalk_strength;B73v2_pos=7:176519662;1allele=G/A;version=Hapmap2;RS=rs830398361;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	610309	610408	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:269128;1allele=C/T;version=Hapmap2;RS=rs831467403;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	625778	625877	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:364128;1allele=G/C;version=Hapmap2;RS=rs815720601;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	659866	659965	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:287350;1allele=C/T;version=Hapmap2;RS=rs827870441;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	664208	664307	.	+	.	Name=Plant_height;B73v2_pos=8:291575;1allele=G/A;version=Hapmap2;RS=rs823089428;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	664428	664527	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:291795;1allele=A/G;version=Hapmap2;RS=rs831304183;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	746082	746181	.	+	.	Name=Plant_height;B73v2_pos=8:403172;1allele=C/T;version=Hapmap2;RS=rs725518890;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	746082	746181	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:403172;1allele=C/T;version=Hapmap2;RS=rs725518890;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	746535	746634	.	+	.	Name=Plant_height;B73v2_pos=8:403625;1allele=C/T;version=Hapmap2;RS=rs806640874;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	803273	803372	.	+	.	Name=Plant_height;B73v2_pos=8:495804;1allele=G/-;version=Hapmap1;RS=rs131638314;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	870690	870789	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:562908;1allele=C/G;version=Hapmap2;RS=rs278429326;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	870690	870789	.	+	.	Name=Plant_height;B73v2_pos=8:562908;1allele=C/G;version=Hapmap2;RS=rs278429326;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	887345	887444	.	+	.	Name=Ear_height;B73v2_pos=8:579565;1allele=G/C;version=Hapmap2;RS=rs278429365;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	984327	984426	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:675300;1allele=T/C;version=Hapmap2;RS=rs278429661;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	993350	993449	.	+	.	Name=Plant_height;B73v2_pos=8:684323;1allele=T/G;version=Hapmap2;RS=rs803441966;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	993350	993449	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:684323;1allele=T/G;version=Hapmap2;RS=rs803441966;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	1003588	1003687	.	+	.	Name=Plant_height;B73v2_pos=8:694561;1allele=G/T;version=Hapmap2;RS=rs278429782;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	1069291	1069390	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:752230;1allele=A/G;version=Hapmap2;RS=rs805046244;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1086408	1086507	.	+	.	Name=Leaf_width;B73v2_pos=8:778041;1allele=T/C;version=Hapmap2;RS=rs1062258735;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	1101529	1101628	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:793617;1allele=T/C;version=Hapmap2;RS=rs810578296;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	1134433	1134532	.	+	.	Name=Plant_height;B73v2_pos=8:828895;1allele=C/T;version=Hapmap2;RS=rs130701138;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	1139692	1139791	.	+	.	Name=Leaf_width;B73v2_pos=8:834154;1allele=G/A;version=Hapmap2;RS=rs131638644;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1139860	1139959	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:834322;1allele=A/G;version=Hapmap2;RS=rs726431438;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1140756	1140855	.	+	.	Name=Leaf_length;B73v2_pos=8:835218;1allele=C/T;version=Hapmap2;RS=rs131638651;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	1142154	1142253	.	+	.	Name=Plant_height;B73v2_pos=8:836616;1allele=C/T;version=Hapmap2;RS=rs278430158;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	1147953	1148052	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:842415;1allele=A/G;version=Hapmap2;RS=rs814020727;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1159466	1159565	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:853929;1allele=C/G;version=Hapmap2;RS=rs849204486;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	1250685	1250784	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:935110;1allele=G/T;version=Hapmap2;RS=rs838632430;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	1253796	1253895	.	+	.	Name=Leaf_length;B73v2_pos=8:938222;1allele=G/C;version=Hapmap2;RS=rs278430508;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	1260847	1260946	.	+	.	Name=Cob_diameter;B73v2_pos=8:945273;1allele=A/G;version=Hapmap2;RS=rs840716401;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1271202	1271301	.	+	.	Name=Stalk_strength;B73v2_pos=8:955629;1allele=A/G;version=Hapmap2;RS=rs844574662;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1274545	1274644	.	+	.	Name=Nitrate;B73v2_pos=8:958972;1allele=G/A;version=Hapmap2;RS=rs850068776;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	1274576	1274675	.	+	.	Name=Nitrate;B73v2_pos=8:959003;1allele=G/A;version=Hapmap2;RS=rs813978279;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	1278039	1278138	.	+	.	Name=Nitrate;B73v2_pos=8:962466;1allele=T/C;version=Hapmap2;RS=rs836976217;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	1280255	1280354	.	+	.	Name=Plant_height;B73v2_pos=8:964682;1allele=A/G;version=Hapmap2;RS=rs727482240;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1282045	1282144	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:966472;1allele=A/G;version=Hapmap2;RS=rs869550407;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	1292715	1292814	.	+	.	Name=Nitrate;B73v2_pos=8:976962;1allele=C/T;version=Hapmap2;RS=rs834316624;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	1345328	1345427	.	+	.	Name=Plant_height;B73v2_pos=8:1028950;1allele=G/A;version=Hapmap1;RS=rs130701270;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	1410567	1410666	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:1146898;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1411628	1411727	.	+	.	Name=Stalk_strength;B73v2_pos=8:1145837;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1423423	1423522	.	+	.	Name=Nitrate;B73v2_pos=8:1134045;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1464768	1464867	.	+	.	Name=Leaf_length;B73v2_pos=8:1098525;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1543004	1543103	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:1232034;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1616071	1616170	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:1355887;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1616874	1616973	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:1355084;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1641878	1641977	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:1330081;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	1752116	1752215	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:1451333;1allele=G/A;version=Hapmap2;RS=rs278430936;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1752834	1752933	.	+	.	Name=Ear_row_number;B73v2_pos=8:1452051;1allele=G/T;version=Hapmap2;RS=rs822170610;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	1752918	1753017	.	+	.	Name=Nitrate;B73v2_pos=8:1452135;1allele=G/A;version=Hapmap2;RS=rs811236352;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	1755102	1755201	.	+	.	Name=Plant_height;B73v2_pos=8:1454419;1allele=G/C;version=Hapmap2;RS=rs802469996;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	1755724	1755823	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:1455041;1allele=G/C;version=Hapmap2;RS=rs278430962;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	1820082	1820181	.	+	.	Name=Plant_height;B73v2_pos=8:1514635;1allele=C/A;version=Hapmap2;RS=rs278431017;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	1820652	1820751	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:1515205;1allele=A/T;version=Hapmap2;RS=rs278431021;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	1820652	1820751	.	+	.	Name=Plant_height;B73v2_pos=8:1515205;1allele=A/T;version=Hapmap2;RS=rs278431021;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	1824595	1824694	.	+	.	Name=Nitrate;B73v2_pos=8:1519148;1allele=A/C;version=Hapmap2;RS=rs278431050;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	1825206	1825305	.	+	.	Name=Plant_height;B73v2_pos=8:1519759;1allele=A/G;version=Hapmap1;RS=rs131639468;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	1825206	1825305	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:1519759;1allele=A/G;version=Hapmap1;RS=rs131639468;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	1825944	1826043	.	+	.	Name=Plant_height;B73v2_pos=8:1520497;1allele=G/A;version=Hapmap2;RS=rs131639496;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	1826817	1826916	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:1521370;1allele=C/T;version=Hapmap2;RS=rs823265114;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	1828587	1828686	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:1523140;1allele=A/C;version=Hapmap1;RS=rs131639548;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	1828884	1828983	.	+	.	Name=Ear_height;B73v2_pos=8:1523437;1allele=G/A;version=Hapmap1;RS=rs131639556;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	1829341	1829440	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:1523894;1allele=T/C;version=Hapmap2;RS=rs131639563;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	1829341	1829440	.	+	.	Name=Plant_height;B73v2_pos=8:1523894;1allele=T/C;version=Hapmap2;RS=rs131639563;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	1829591	1829690	.	+	.	Name=Plant_height;B73v2_pos=8:1524144;1allele=C/T;version=Hapmap2;RS=rs724375332;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	1878467	1878566	.	+	.	Name=Stalk_strength;B73v2_pos=8:1589814;1allele=T/C;version=Hapmap2;RS=rs844111127;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	1946857	1946956	.	+	.	Name=Nitrate;B73v2_pos=8:1638646;1allele=G/A;version=Hapmap2;RS=rs825119797;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	2025789	2025888	.	+	.	Name=Nitrate;B73v2_pos=8:1718172;1allele=G/A;version=Hapmap2;RS=rs804035006;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	2039655	2039754	.	+	.	Name=Plant_height;B73v2_pos=8:1732040;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	2046964	2047063	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:1739349;1allele=A/T;version=Hapmap2;RS=rs1062452886;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	2197311	2197410	.	+	.	Name=Ear_height;B73v2_pos=8:1888825;1allele=A/G;version=Hapmap2;RS=rs278431640;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	2200672	2200771	.	+	.	Name=Stalk_strength;B73v2_pos=8:1892186;1allele=G/A;version=Hapmap2;RS=rs829130496;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	2234633	2234732	.	+	.	Name=Cob_diameter;B73v2_pos=8:1918172;1allele=C/T;version=Hapmap2;RS=rs131639844;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	2248252	2248351	.	+	.	Name=Ear_height;B73v2_pos=8:1931791;1allele=C/A;version=Hapmap2;RS=rs278431967;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	2371422	2371521	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2061891;1allele=A/G;version=Hapmap2;RS=rs131639957;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	2371549	2371648	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2062018;1allele=G/A;version=Hapmap2;RS=rs726373952;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	2387957	2388056	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2078426;1allele=T/C;version=Hapmap2;RS=rs828756731;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	2388696	2388795	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2079165;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	2425513	2425612	.	+	.	Name=Leaf_length;B73v2_pos=8:2116121;1allele=T/A;version=Hapmap2;RS=rs837682210;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	2467372	2467471	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:2156135;1allele=C/G;version=Hapmap2;RS=rs822271217;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	2551678	2551777	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:2246161;1allele=A/G;version=Hapmap2;RS=rs841689391;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	2570868	2570967	.	+	.	Name=Leaf_length;B73v2_pos=8:2265356;1allele=G/A;version=Hapmap2;RS=rs844269270;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	2572240	2572339	.	+	.	Name=Leaf_length;B73v2_pos=8:2266728;1allele=G/A;version=Hapmap2;RS=rs808768759;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	2602393	2602492	.	+	.	Name=Leaf_length;B73v2_pos=8:2298084;1allele=A/G;version=Hapmap2;RS=rs848423138;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	2715595	2715694	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2412048;1allele=T/A;version=Hapmap2;RS=rs806955813;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	2716349	2716448	.	+	.	Name=Plant_height;B73v2_pos=8:2412802;1allele=T/C;version=Hapmap2;RS=rs278432944;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	2717301	2717400	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2413754;1allele=A/G;version=Hapmap2;RS=rs832394429;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	2720687	2720786	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2417140;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	2726217	2726316	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2422664;1allele=A/C;version=Hapmap2;RS=rs278433022;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	2728113	2728212	.	+	.	Name=Leaf_width;B73v2_pos=8:2424562;1allele=T/C;version=Hapmap2;RS=rs278433048;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	2876382	2876481	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:2556506;1allele=G/C;version=Hapmap2;RS=rs821505660;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	2879587	2879686	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:2559709;1allele=G/T;version=Hapmap2;RS=rs836989725;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	2956386	2956485	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:2632223;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3014055	3014154	.	+	.	Name=Plant_height;B73v2_pos=8:2693423;1allele=C/T;version=Hapmap1;RS=rs131640357;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	3014062	3014161	.	+	.	Name=Plant_height;B73v2_pos=8:2693430;1allele=C/G;version=Hapmap1;RS=rs131640359;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	3065008	3065107	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2741883;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3094160	3094259	.	+	.	Name=Leaf_length;B73v2_pos=8:2762172;1allele=/TGTAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3096776	3096875	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:2759556;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3117457	3117556	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:2787905;1allele=A/G;version=Hapmap2;RS=rs809962833;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	3120129	3120228	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2790576;1allele=/AAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3120187	3120286	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2790634;1allele=/GCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3156235	3156334	.	+	.	Name=Plant_height;B73v2_pos=8:2809578;1allele=/GTAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3156328	3156427	.	+	.	Name=Leaf_length;B73v2_pos=8:2809671;1allele=T/C;version=Hapmap1;RS=rs131640551;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	3167974	3168073	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2837472;1allele=C/A;version=Hapmap2;RS=rs831847178;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	3167998	3168097	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2837496;1allele=G/A;version=Hapmap2;RS=rs830838696;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	3168137	3168236	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2837635;1allele=C/T;version=Hapmap2;RS=rs826168236;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	3169399	3169498	.	+	.	Name=Leaf_length;B73v2_pos=8:2838898;1allele=G/A;version=Hapmap1;RS=rs131640584;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	3193735	3193834	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:2863234;1allele=G/A;version=Hapmap2;RS=rs278433553;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	3193779	3193878	.	+	.	Name=Ear_height;B73v2_pos=8:2863278;1allele=G/A;version=Hapmap2;RS=rs278433555;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	3299642	3299741	.	+	.	Name=Stalk_strength;B73v2_pos=8:2960018;1allele=G/A;version=Hapmap2;RS=rs838035562;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	3360087	3360186	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:3053458;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3410526	3410625	.	+	.	Name=Leaf_length;B73v2_pos=8:3101821;1allele=T/A;version=Hapmap2;RS=rs278434091;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	3472762	3472861	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:3164414;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3484731	3484830	.	+	.	Name=Stalk_strength;B73v2_pos=8:3176383;1allele=A/G;version=Hapmap2;RS=rs838266407;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	3803323	3803422	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:3491738;1allele=C/A;version=Hapmap2;RS=rs802211159;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	3803338	3803437	.	+	.	Name=Leaf_length;B73v2_pos=8:3491753;1allele=C/A;version=Hapmap1;RS=rs131641307;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	3854445	3854544	.	+	.	Name=Leaf_width;B73v2_pos=3:209864485;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	3949662	3949761	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:3631936;1allele=G/A;version=Hapmap2;RS=rs845192062;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	3989026	3989125	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:3678950;1allele=T/C;version=Hapmap2;RS=rs1062229221;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	4001834	4001933	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:3691758;1allele=T/C;version=Hapmap2;RS=rs278435328;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4004097	4004196	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:3694021;1allele=C/T;version=Hapmap2;RS=rs131641552;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4189194	4189293	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:3883694;1allele=T/G;version=Hapmap1;RS=rs131641748;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	4196539	4196638	.	+	.	Name=Leaf_width;B73v2_pos=8:3891039;1allele=G/T;version=Hapmap2;RS=rs278435629;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	4224058	4224157	.	+	.	Name=Leaf_width;B73v2_pos=8:3917915;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4301532	4301631	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:4063798;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4349235	4349334	.	+	.	Name=Plant_height;B73v2_pos=8:4042932;1allele=C/A;version=Hapmap2;RS=rs278435863;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	4349235	4349334	.	+	.	Name=Ear_height;B73v2_pos=8:4042932;1allele=C/A;version=Hapmap2;RS=rs278435863;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	4353052	4353151	.	+	.	Name=Leaf_length;B73v2_pos=8:4046743;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4559676	4559775	.	+	.	Name=Leaf_length;B73v2_pos=8:4232471;1allele=G/C;version=Hapmap1;RS=rs131641957;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	4559758	4559857	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4232553;1allele=C/G;version=Hapmap2;RS=rs278436256;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	4559870	4559969	.	+	.	Name=Leaf_length;B73v2_pos=8:4232665;1allele=T/C;version=Hapmap2;RS=rs131641961;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4561561	4561660	.	+	.	Name=Leaf_width;B73v2_pos=8:4234357;1allele=T/C;version=Hapmap2;RS=rs278436267;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4563830	4563934	.	+	.	Name=Leaf_length;B73v2_pos=8:4236625;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4568177	4568276	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:4240967;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4568888	4568987	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4241678;1allele=T/A;version=Hapmap2;RS=rs823102145;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4570212	4570311	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4243002;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4570758	4570857	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4243548;1allele=A/T;version=Hapmap2;RS=rs842954894;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	4581186	4581285	.	+	.	Name=Leaf_length;B73v2_pos=8:4253977;1allele=C/T;version=Hapmap2;RS=rs812658422;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	4583619	4583718	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4256410;1allele=T/C;version=Hapmap2;RS=rs130702420;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4584004	4584103	.	+	.	Name=Leaf_length;B73v2_pos=8:4256795;1allele=C/A;version=Hapmap2;RS=rs803808639;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	4584470	4584569	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4257261;1allele=G/A;version=Hapmap2;RS=rs278436362;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	4605402	4605501	.	+	.	Name=Leaf_width;B73v2_pos=8:4278110;1allele=C/T;version=Hapmap2;RS=rs1062983723;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4662656	4662755	.	+	.	Name=Leaf_width;B73v2_pos=8:4333709;1allele=T/C;version=Hapmap2;RS=rs812408211;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	4663009	4663108	.	+	.	Name=Leaf_width;B73v2_pos=8:4334062;1allele=A/G;version=Hapmap2;RS=rs131642127;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	4679328	4679427	.	+	.	Name=Leaf_width;B73v2_pos=8:4350384;1allele=A/G;version=Hapmap2;RS=rs278436532;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	4687400	4687499	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:4358646;1allele=C/T;version=Hapmap1;RS=rs131642158;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	4741687	4741786	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4411878;1allele=C/T;version=Hapmap2;RS=rs831660400;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	4753609	4753708	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4487776;1allele=C/A;version=Hapmap2;RS=rs839486208;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	4755251	4755350	.	+	.	Name=Leaf_width;B73v2_pos=8:4489418;1allele=A/T;version=Hapmap2;RS=rs278437112;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	4755658	4755757	.	+	.	Name=Leaf_length;B73v2_pos=8:4489825;1allele=A/G;version=Hapmap2;RS=rs843365287;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	4799855	4799954	.	+	.	Name=Leaf_length;B73v2_pos=8:4455661;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4815918	4816017	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:4440796;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4902600	4902699	.	+	.	Name=Leaf_width;B73v2_pos=8:4551092;1allele=A/C;version=Hapmap2;RS=rs278437259;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	4911542	4911641	.	+	.	Name=Leaf_width;B73v2_pos=8:4555299;1allele=G/A;version=Hapmap1;RS=rs131642351;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	4951416	4951515	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:4620095;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4958078	4958177	.	+	.	Name=Leaf_length;B73v2_pos=8:133851551;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4958929	4959028	.	+	.	Name=Leaf_length;B73v2_pos=8:133850700;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4958989	4959088	.	+	.	Name=Leaf_length;B73v2_pos=8:133850640;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4958998	4959097	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:133850631;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4968024	4968123	.	+	.	Name=Leaf_width;B73v2_pos=8:4592394;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	4970083	4970182	.	+	.	Name=Leaf_length;B73v2_pos=8:4590335;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	5015160	5015259	.	+	.	Name=Leaf_length;B73v2_pos=8:4699990;1allele=C/T;version=Hapmap2;RS=rs826033449;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	5103591	5103690	.	+	.	Name=Leaf_width;B73v2_pos=8:4791754;1allele=A/-;version=Hapmap1;RS=rs833374551;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	5123888	5123987	.	+	.	Name=Leaf_width;B73v2_pos=8:4768832;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	5306670	5306769	.	+	.	Name=Tassel_length;B73v2_pos=8:4959993;1allele=C/A;version=Hapmap2;RS=rs809376410;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	5308763	5308862	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:4962086;1allele=C/A;version=Hapmap2;RS=rs840101980;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	5314080	5314179	.	+	.	Name=Glutamate;B73v2_pos=8:4967091;1allele=/TGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	5371974	5372073	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:5038580;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	5472552	5472651	.	+	.	Name=Leaf_width;B73v2_pos=8:5135950;1allele=C/T;version=Hapmap2;RS=rs130703889;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	5536063	5536162	.	+	.	Name=Leaf_width;B73v2_pos=8:5189554;1allele=G/T;version=Hapmap2;RS=rs278438607;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	5579511	5579610	.	+	.	Name=Leaf_length;B73v2_pos=8:5233010;1allele=G/A;version=Hapmap2;RS=rs839247803;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	5597820	5597919	.	+	.	Name=Stalk_strength;B73v2_pos=8:5251323;1allele=C/T;version=Hapmap2;RS=rs808167165;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	5599960	5600059	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:5253463;1allele=C/A;version=Hapmap2;RS=rs803591119;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	5632704	5632803	.	+	.	Name=Leaf_width;B73v2_pos=8:5294623;1allele=A/G;version=Hapmap2;RS=rs824528558;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	5632812	5632911	.	+	.	Name=Leaf_width;B73v2_pos=8:5294731;1allele=C/T;version=Hapmap2;RS=rs815421951;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	5633556	5633655	.	+	.	Name=Days_to_silk;B73v2_pos=8:5295475;1allele=A/G;version=Hapmap1;RS=rs131642932;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	5662507	5662606	.	+	.	Name=Stalk_strength;B73v2_pos=8:5323511;1allele=C/T;version=Hapmap2;RS=rs822146900;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	5849254	5849353	.	+	.	Name=Days_to_silk;B73v2_pos=8:5498873;1allele=A/G;version=Hapmap2;RS=rs819761630;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	5884293	5884392	.	+	.	Name=Stalk_strength;B73v2_pos=8:5533917;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	5947569	5947668	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:5597760;1allele=C/G;version=Hapmap2;RS=rs843793459;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	6179454	6179553	.	+	.	Name=Leaf_width;B73v2_pos=8:5828808;1allele=T/A;version=Hapmap2;RS=rs130704870;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	6203597	6203696	.	+	.	Name=Leaf_width;B73v2_pos=8:5852952;1allele=A/G;version=Hapmap2;RS=rs816682116;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	6206707	6206806	.	+	.	Name=Stalk_strength;B73v2_pos=8:5856062;1allele=A/G;version=Hapmap2;RS=rs838167901;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	6206774	6206873	.	+	.	Name=Stalk_strength;B73v2_pos=8:5856129;1allele=A/G;version=Hapmap2;RS=rs841388167;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	6259251	6259350	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:5908921;1allele=C/T;version=Hapmap2;RS=rs824082079;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	6264537	6264636	.	+	.	Name=Days_to_silk;B73v2_pos=8:5914207;1allele=A/G;version=Hapmap2;RS=rs130705218;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	6429575	6429674	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:6063445;1allele=T/C;version=Hapmap2;RS=rs845413327;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	6502412	6502511	.	+	.	Name=Leaf_width;B73v2_pos=8:6149417;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	6710395	6710494	.	+	.	Name=Leaf_length;B73v2_pos=8:6361805;1allele=C/A;version=Hapmap2;RS=rs1061247822;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	6710589	6710688	.	+	.	Name=Days_to_silk;B73v2_pos=8:6361999;1allele=T/C;version=Hapmap2;RS=rs278441185;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	6769372	6769471	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:104241663;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	6847917	6848016	.	+	.	Name=Leaf_width;B73v2_pos=8:6446516;1allele=G/A;version=Hapmap2;RS=rs847673394;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	6857545	6857644	.	+	.	Name=Days_to_silk;B73v2_pos=8:6456144;1allele=C/G;version=Hapmap2;RS=rs130705686;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	6861217	6861316	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:6459816;1allele=C/T;version=Hapmap2;RS=rs845154788;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	6911064	6911163	.	+	.	Name=Days_to_silk;B73v2_pos=8:6481075;1allele=A/T;version=Hapmap2;RS=rs130705782;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	7000051	7000150	.	+	.	Name=Leaf_width;B73v2_pos=8:6585747;1allele=C/A;version=Hapmap2;RS=rs278441537;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	7003456	7003555	.	+	.	Name=Days_to_silk;B73v2_pos=8:6589146;1allele=G/A;version=Hapmap2;RS=rs1062063358;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	7003908	7004007	.	+	.	Name=Days_to_silk;B73v2_pos=8:6589598;1allele=T/G;version=Hapmap2;RS=rs1063864426;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	7034036	7034135	.	+	.	Name=Days_to_silk;B73v2_pos=8:6637535;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	7065447	7065546	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:6653481;1allele=A/G;version=Hapmap2;RS=rs845066315;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	7078932	7079031	.	+	.	Name=Days_to_silk;B73v2_pos=8:6666973;1allele=G/A;version=Hapmap2;RS=rs130706077;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	7079502	7079601	.	+	.	Name=Days_to_silk;B73v2_pos=8:6667543;1allele=C/G;version=Hapmap2;RS=rs130706087;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	7084145	7084244	.	+	.	Name=Days_to_silk;B73v2_pos=8:6672186;1allele=G/A;version=Hapmap2;RS=rs1060566150;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	7087823	7087922	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:6675835;1allele=C/T;version=Hapmap2;RS=rs845520513;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	7111175	7111274	.	+	.	Name=Days_to_silk;B73v2_pos=8:6700486;1allele=T/C;version=Hapmap2;RS=rs805691640;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	7111572	7111671	.	+	.	Name=Days_to_silk;B73v2_pos=8:6700883;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	7111654	7111753	.	+	.	Name=Days_to_silk;B73v2_pos=8:6700965;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	7220717	7220816	.	+	.	Name=Days_to_silk;B73v2_pos=8:6813455;1allele=A/G;version=Hapmap2;RS=rs130706270;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	7250642	7250741	.	+	.	Name=Days_to_silk;B73v2_pos=8:6843395;1allele=G/A;version=Hapmap2;RS=rs130706333;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	7254154	7254253	.	+	.	Name=Days_to_silk;B73v2_pos=8:6846907;1allele=C/T;version=Hapmap2;RS=rs278441887;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	7254715	7254814	.	+	.	Name=Days_to_silk;B73v2_pos=8:6847468;1allele=C/A;version=Hapmap2;RS=rs801991876;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	7255146	7255245	.	+	.	Name=Days_to_silk;B73v2_pos=8:6847899;1allele=T/C;version=Hapmap2;RS=rs278441915;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	7255152	7255251	.	+	.	Name=Days_to_silk;B73v2_pos=8:6847905;1allele=C/T;version=Hapmap2;RS=rs278441916;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	7255571	7255670	.	+	.	Name=Days_to_silk;B73v2_pos=8:6848324;1allele=G/A;version=Hapmap2;RS=rs278441922;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	7257101	7257200	.	+	.	Name=Days_to_silk;B73v2_pos=8:6849854;1allele=C/T;version=Hapmap1;RS=rs131644262;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	7260438	7260537	.	+	.	Name=Days_to_silk;B73v2_pos=8:6853191;1allele=A/C;version=Hapmap2;RS=rs850450337;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	7262201	7262300	.	+	.	Name=Days_to_silk;B73v2_pos=8:6854954;1allele=T/C;version=Hapmap1;RS=rs130706389;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	7323878	7323977	.	+	.	Name=Days_to_silk;B73v2_pos=8:6920611;1allele=A/G;version=Hapmap2;RS=rs815445362;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	7345228	7345327	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:6941961;1allele=G/A;version=Hapmap2;RS=rs130706596;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	7362206	7362305	.	+	.	Name=Days_to_silk;B73v2_pos=8:6959209;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	7431060	7431159	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:7027398;1allele=G/C;version=Hapmap1;RS=rs131644474;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	7437495	7437594	.	+	.	Name=Days_to_silk;B73v2_pos=8:7033832;1allele=A/G;version=Hapmap2;RS=rs130706647;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	7917234	7917333	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:7511155;1allele=A/C;version=Hapmap2;RS=rs836395517;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	7969314	7969413	.	+	.	Name=Days_to_silk;B73v2_pos=8:7536522;1allele=A/G;version=Hapmap2;RS=rs278442785;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	8427895	8427994	.	+	.	Name=Stalk_strength;B73v2_pos=8:8014326;1allele=A/G;version=Hapmap2;RS=rs840677858;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	8438456	8438555	.	+	.	Name=Days_to_silk;B73v2_pos=8:8024887;1allele=A/G;version=Hapmap2;RS=rs130708166;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	8513719	8513818	.	+	.	Name=Glutamate;B73v2_pos=8:8101465;1allele=A/T;version=Hapmap2;RS=rs812212766;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	8654760	8654859	.	+	.	Name=Glutamate;B73v2_pos=8:8240826;1allele=T/A;version=Hapmap2;RS=rs130708468;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	8685224	8685323	.	+	.	Name=Stalk_strength;B73v2_pos=8:8271295;1allele=C/T;version=Hapmap2;RS=rs130708599;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	8713330	8713429	.	+	.	Name=Stalk_strength;B73v2_pos=8:8299401;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	8925436	8925535	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:117447167;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	8983052	8983151	.	+	.	Name=Stalk_strength;B73v2_pos=8:8585198;1allele=A/G;version=Hapmap2;RS=rs836180738;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	9010958	9011057	.	+	.	Name=Days_to_silk;B73v2_pos=8:8613109;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	9015518	9015617	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:8617669;1allele=/CACCGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	9056347	9056446	.	+	.	Name=Leaf_width;B73v2_pos=8:8632831;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	9126499	9126598	.	+	.	Name=Leaf_width;B73v2_pos=8:8729973;1allele=A/G;version=Hapmap2;RS=rs278445527;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	9156877	9156976	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:124636751;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	9366668	9366767	.	+	.	Name=Glutamate;B73v2_pos=8:8965408;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	9645345	9645444	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:9229336;1allele=T/A;version=Hapmap2;RS=rs832336427;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	9666573	9666672	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:9250434;1allele=C/T;version=Hapmap2;RS=rs818673227;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	10009062	10009161	.	+	.	Name=Leaf_width;B73v2_pos=8:9605627;1allele=T/C;version=Hapmap2;RS=rs842164889;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	10359451	10359550	.	+	.	Name=Leaf_width;B73v2_pos=8:9928719;1allele=T/C;version=Hapmap2;RS=rs278446888;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	10359885	10359984	.	+	.	Name=Leaf_width;B73v2_pos=8:9929153;1allele=A/C;version=Hapmap2;RS=rs278446898;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	10360115	10360214	.	+	.	Name=Leaf_width;B73v2_pos=8:9929383;1allele=T/C;version=Hapmap2;RS=rs842299943;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	10361633	10361732	.	+	.	Name=Leaf_width;B73v2_pos=8:9930901;1allele=C/A;version=Hapmap2;RS=rs278446927;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	10362797	10362896	.	+	.	Name=Leaf_width;B73v2_pos=8:9932065;1allele=G/T;version=Hapmap2;RS=rs130711227;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	10395839	10395938	.	+	.	Name=Glutamate;B73v2_pos=8:9964073;1allele=C/G;version=Hapmap2;RS=rs845468069;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	10505406	10505505	.	+	.	Name=Days_to_silk;B73v2_pos=8:10077464;1allele=T/A;version=Hapmap2;RS=rs821045426;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	10785138	10785237	.	+	.	Name=Stalk_strength;B73v2_pos=8:10364221;1allele=/GTACT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	11187685	11187784	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:10774613;1allele=C/G;version=Hapmap2;RS=rs827819908;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	11188625	11188724	.	+	.	Name=Tassel_length;B73v2_pos=7:130771003;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	11864042	11864141	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:11415439;1allele=C/T;version=Hapmap2;RS=rs807485175;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	11932078	11932177	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:11483494;1allele=C/T;version=Hapmap2;RS=rs802777322;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	12085735	12085834	.	+	.	Name=Stalk_strength;B73v2_pos=8:11663560;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	12339263	12339362	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:11903425;1allele=T/C;version=Hapmap2;RS=rs130714523;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	12345404	12345503	.	+	.	Name=Ear_row_number;B73v2_pos=8:11909565;1allele=G/C;version=Hapmap2;RS=rs817091666;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	12353637	12353736	.	+	.	Name=Leaf_width;B73v2_pos=8:11917794;1allele=G/C;version=Hapmap2;RS=rs131648604;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	12357441	12357540	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:11921584;1allele=G/A;version=Hapmap2;RS=rs842037099;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	12564337	12564436	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:12194586;1allele=T/C;version=Hapmap2;RS=rs807519098;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	12570573	12570672	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:191587373;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	12712756	12712855	.	+	.	Name=Leaf_width;B73v2_pos=8:12265509;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	12731548	12731647	.	+	.	Name=Leaf_width;B73v2_pos=8:12284301;1allele=G/A;version=Hapmap2;RS=rs130714763;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	12835820	12835919	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:12390634;1allele=T/C;version=Hapmap2;RS=rs848080421;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	12877621	12877720	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=2:142188585;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	12999757	12999856	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:12543931;1allele=C/T;version=Hapmap2;RS=rs1061632795;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	12999882	12999981	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:12544056;1allele=A/G;version=Hapmap2;RS=rs130715093;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	13011029	13011128	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:12555203;1allele=A/T;version=Hapmap2;RS=rs130715123;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	13022161	13022260	.	+	.	Name=Leaf_width;B73v2_pos=8:12566335;1allele=A/G;version=Hapmap2;RS=rs130715216;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	13022166	13022265	.	+	.	Name=Leaf_width;B73v2_pos=8:12566340;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13082633	13082732	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:12611113;1allele=A/G;version=Hapmap2;RS=rs839642725;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	13169755	13169854	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:12768695;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13190451	13190550	.	+	.	Name=Leaf_width;B73v2_pos=8:12789392;1allele=A/T;version=Hapmap2;RS=rs278450163;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	13392949	13393048	.	+	.	Name=Ear_row_number;B73v2_pos=8:12990159;1allele=C/G;version=Hapmap1;RS=rs131649793;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	13514035	13514134	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:13132916;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13602307	13602406	.	+	.	Name=Ear_row_number;B73v2_pos=8:13205497;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13693469	13693568	.	+	.	Name=Ear_row_number;B73v2_pos=8:13292618;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13693540	13693639	.	+	.	Name=Ear_row_number;B73v2_pos=8:13292689;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13694202	13694301	.	+	.	Name=Ear_row_number;B73v2_pos=8:13293351;1allele=T/C;version=Hapmap2;RS=rs816821169;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	13828888	13828987	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:13441816;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13829423	13829522	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:13442351;1allele=/GCAAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	13834701	13834800	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:13447629;1allele=G/A;version=Hapmap2;RS=rs726891345;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	14178733	14178832	.	+	.	Name=Ear_row_number;B73v2_pos=8:13774938;1allele=G/T;version=Hapmap2;RS=rs278451631;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	14486713	14486812	.	+	.	Name=Ear_row_number;B73v2_pos=8:14069197;1allele=A/G;version=Hapmap1;RS=rs130717621;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	14490644	14490743	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:14073128;1allele=T/G;version=Hapmap2;RS=rs809542274;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	14493928	14494027	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:14076412;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	14506476	14506575	.	+	.	Name=Ear_row_number;B73v2_pos=8:14088960;1allele=C/A;version=Hapmap2;RS=rs131651065;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	14665056	14665155	.	+	.	Name=Height_above_ear;B73v2_pos=1:173875024;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	14987867	14987966	.	+	.	Name=Ear_row_number;B73v2_pos=8:14545310;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	14988047	14988146	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:14545490;1allele=A/T;version=Hapmap2;RS=rs826218345;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	14988332	14988431	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:14545775;1allele=C/T;version=Hapmap1;RS=rs131651331;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	15039069	15039168	.	+	.	Name=Ear_row_number;B73v2_pos=8:14597187;1allele=G/A;version=Hapmap1;RS=rs131651452;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	15263109	15263208	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:209970990;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	16277443	16277542	.	+	.	Name=100_Kernel_weight;B73v2_pos=1:198960156;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	16416797	16416896	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:15962442;1allele=G/A;version=Hapmap2;RS=rs805620893;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	16639346	16639445	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:184667599;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	16646528	16646627	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:16209859;1allele=G/T;version=Hapmap2;RS=rs825846830;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	16646528	16646627	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:16209859;1allele=G/T;version=Hapmap2;RS=rs825846830;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	16808407	16808506	.	+	.	Name=Height_above_ear;B73v2_pos=8:16269879;1allele=G/A;version=Hapmap2;RS=rs130720297;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	16855744	16855843	.	+	.	Name=Height_above_ear;B73v2_pos=8:16316849;1allele=A/G;version=Hapmap2;RS=rs807296782;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	16929318	16929417	.	+	.	Name=Stalk_strength;B73v2_pos=1:292924876;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	17314867	17314966	.	+	.	Name=Height_above_ear;B73v2_pos=8:16770295;1allele=A/G;version=Hapmap2;RS=rs131653476;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	17394771	17394870	.	+	.	Name=Height_above_ear;B73v2_pos=8:16854519;1allele=A/G;version=Hapmap1;RS=rs131653682;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	17622977	17623076	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:17069261;1allele=G/T;version=Hapmap1;RS=rs869685166;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	17625309	17625408	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:17071593;1allele=T/A;version=Hapmap2;RS=rs278456132;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	17674501	17674600	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:17124522;1allele=G/T;version=Hapmap2;RS=rs278456170;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	17692382	17692481	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:17142408;1allele=A/C;version=Hapmap2;RS=rs834795336;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	17709543	17709642	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:17159996;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	17709589	17709688	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:17160042;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	17709857	17709956	.	+	.	Name=Ear_height;B73v2_pos=8:17160310;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	17728205	17728304	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:17178614;1allele=T/C;version=Hapmap2;RS=rs130721193;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	17936234	17936333	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:17389197;1allele=/ATGTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	17970954	17971053	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:17423920;1allele=G/A;version=Hapmap2;RS=rs845735329;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	17971543	17971642	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:17424509;1allele=G/T;version=Hapmap2;RS=rs842474750;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	18204572	18204671	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:17631373;1allele=C/T;version=Hapmap2;RS=rs821488729;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	18252497	18252596	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:17670688;1allele=T/C;version=Hapmap2;RS=rs131656229;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	18386570	18386669	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:296369251;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	18713146	18713245	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18120596;1allele=A/T;version=Hapmap2;RS=rs825349438;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	18797680	18797779	.	+	.	Name=Leaf_width;B73v2_pos=8:18196897;1allele=T/C;version=Hapmap2;RS=rs824434159;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	18807213	18807312	.	+	.	Name=Leaf_length;B73v2_pos=8:18206430;1allele=T/C;version=Hapmap2;RS=rs278457378;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	18816394	18816493	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18215611;1allele=A/G;version=Hapmap2;RS=rs131655821;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	18845165	18845264	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:18243295;1allele=A/G;version=Hapmap2;RS=rs130721945;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	18930467	18930566	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:18320793;1allele=C/A;version=Hapmap2;RS=rs803415170;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	18959622	18959721	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18349539;1allele=C/T;version=Hapmap2;RS=rs802786192;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	18968433	18968532	.	+	.	Name=Leaf_width;B73v2_pos=8:18358350;1allele=C/T;version=Hapmap2;RS=rs803723751;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	18976835	18976934	.	+	.	Name=Ear_row_number;B73v2_pos=8:18366752;1allele=G/T;version=Hapmap1;RS=rs131655472;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	19029418	19029517	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:18419005;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	19054070	19054169	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:18443655;1allele=G/C;version=Hapmap1;RS=rs832403617;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	19089097	19089196	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:18475157;1allele=C/T;version=Hapmap2;RS=rs812328252;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	19123469	19123568	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:18509533;1allele=T/C;version=Hapmap2;RS=rs830659704;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	19123498	19123597	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:18509562;1allele=A/G;version=Hapmap2;RS=rs810423768;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	19124609	19124708	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:18510673;1allele=C/T;version=Hapmap2;RS=rs842677087;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	19126255	19126354	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:18512321;1allele=A/C;version=Hapmap2;RS=rs849114372;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	19196134	19196233	.	+	.	Name=Nitrate;B73v2_pos=8:18596881;1allele=G/T;version=Hapmap2;RS=rs841059659;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	19251420	19251519	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:18629450;1allele=G/A;version=Hapmap2;RS=rs816821624;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	19251420	19251519	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:18629450;1allele=G/A;version=Hapmap2;RS=rs816821624;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	19332791	19332890	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18710838;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	19412354	19412453	.	+	.	Name=Ear_row_number;B73v2_pos=8:18788520;1allele=A/G;version=Hapmap2;RS=rs824521502;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	19517791	19517890	.	+	.	Name=Height_above_ear;B73v2_pos=8:18897782;1allele=A/C;version=Hapmap1;RS=rs131654927;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	19522125	19522224	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:18902116;1allele=A/G;version=Hapmap1;RS=rs726574025;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	19525347	19525446	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18905337;1allele=T/C;version=Hapmap1;RS=rs130721549;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	19587521	19587620	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18967541;1allele=T/C;version=Hapmap2;RS=rs806634582;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	19587626	19587725	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18967646;1allele=C/T;version=Hapmap2;RS=rs131654836;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	19594457	19594556	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:18974477;1allele=G/A;version=Hapmap2;RS=rs836418700;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	19596361	19596460	.	+	.	Name=Ear_row_number;B73v2_pos=8:18976384;1allele=C/T;version=Hapmap2;RS=rs131654826;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	19596435	19596534	.	+	.	Name=Ear_row_number;B73v2_pos=8:18976458;1allele=A/C;version=Hapmap2;RS=rs834694012;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	19618914	19619013	.	+	.	Name=Ear_height;B73v2_pos=8:19016779;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	19630541	19630640	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:19029025;1allele=C/T;version=Hapmap2;RS=rs844668680;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	19775450	19775549	.	+	.	Name=Ear_row_number;B73v2_pos=8:19121519;1allele=T/G;version=Hapmap1;RS=rs131656337;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	19782488	19782587	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:19128498;1allele=TG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	19792220	19792319	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:19156500;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	19878450	19878549	.	+	.	Name=Ear_row_number;B73v2_pos=8:19233396;1allele=A/G;version=Hapmap2;RS=rs821391630;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	19879392	19879491	.	+	.	Name=Ear_row_number;B73v2_pos=8:19234338;1allele=C/T;version=Hapmap2;RS=rs822090510;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	19879886	19879985	.	+	.	Name=Ear_row_number;B73v2_pos=8:19234832;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	20124919	20125018	.	+	.	Name=Ear_row_number;B73v2_pos=8:19516522;1allele=T/C;version=Hapmap2;RS=rs131179668;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	20171014	20171113	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:19554942;1allele=G/A;version=Hapmap2;RS=rs822027303;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	20284435	20284534	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:19672256;1allele=/GTAGAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	20284847	20284946	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:19672668;1allele=C/T;version=Hapmap2;RS=rs131656757;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	20285663	20285762	.	+	.	Name=Leaf_width;B73v2_pos=8:19673484;1allele=T/A;version=Hapmap2;RS=rs803327934;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	20324698	20324797	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:19711730;1allele=C/T;version=Hapmap1;RS=rs726088122;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	20418140	20418239	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:19804731;1allele=T/G;version=Hapmap1;RS=rs131656896;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	20440137	20440236	.	+	.	Name=Ear_height;B73v2_pos=8:19826786;1allele=C/T;version=Hapmap2;RS=rs815564290;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	20446605	20446704	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:19833254;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	20448491	20448590	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:19835140;1allele=C/A;version=Hapmap1;RS=rs131657065;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	20636997	20637096	.	+	.	Name=Ear_height;B73v2_pos=8:20024043;1allele=T/C;version=Hapmap2;RS=rs837041608;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	20648948	20649047	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:20035992;1allele=C/T;version=Hapmap2;RS=rs816537225;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	20864231	20864330	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:20264687;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	21021312	21021411	.	+	.	Name=Cob_diameter;B73v2_pos=8:20412647;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	21159020	21159119	.	+	.	Name=Height_above_ear;B73v2_pos=8:20516303;1allele=T/A;version=Hapmap2;RS=rs278459678;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	21159459	21159558	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:20516742;1allele=T/A;version=Hapmap2;RS=rs278459679;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	21159498	21159597	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:20516781;1allele=G/A;version=Hapmap2;RS=rs131181502;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	21173252	21173351	.	+	.	Name=Leaf_width;B73v2_pos=8:20542244;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	21251440	21251539	.	+	.	Name=Leaf_width;B73v2_pos=8:20623938;1allele=C/T;version=Hapmap2;RS=rs823918039;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	21284879	21284978	.	+	.	Name=Plant_height;B73v2_pos=8:20675254;1allele=C/G;version=Hapmap2;RS=rs824382246;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	21286518	21286617	.	+	.	Name=Height_above_ear;B73v2_pos=8:20676893;1allele=G/A;version=Hapmap1;RS=rs131658022;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	21288833	21288932	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:20679208;1allele=C/T;version=Hapmap2;RS=rs833939707;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	21304021	21304120	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:20694397;1allele=G/T;version=Hapmap2;RS=rs801990515;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	21312283	21312382	.	+	.	Name=Leaf_length;B73v2_pos=8:20702659;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	21356379	21356478	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:20767924;1allele=T/C;version=Hapmap2;RS=rs844927951;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	21356379	21356478	.	+	.	Name=Plant_height;B73v2_pos=8:20767924;1allele=T/C;version=Hapmap2;RS=rs844927951;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	21421517	21421616	.	+	.	Name=Leaf_width;B73v2_pos=8:20820590;1allele=C/T;version=Hapmap2;RS=rs810528886;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	21422724	21422823	.	+	.	Name=Ear_row_number;B73v2_pos=8:20821797;1allele=A/G;version=Hapmap2;RS=rs820939508;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	21431418	21431517	.	+	.	Name=Height_above_ear;B73v2_pos=8:20830174;1allele=C/T;version=Hapmap1;RS=rs131658280;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	21431527	21431626	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:20830283;1allele=C/A;version=Hapmap1;RS=rs131658285;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	21431527	21431626	.	+	.	Name=Height_above_ear;B73v2_pos=8:20830283;1allele=C/A;version=Hapmap2;RS=rs131658285;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	21431528	21431627	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:20830284;1allele=C/A;version=Hapmap1;RS=rs131658286;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	21431528	21431627	.	+	.	Name=Height_above_ear;B73v2_pos=8:20830284;1allele=C/A;version=Hapmap1;RS=rs131658286;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	21436793	21436892	.	+	.	Name=Ear_row_number;B73v2_pos=8:20835543;1allele=G/A;version=Hapmap2;RS=rs842824736;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	21517351	21517450	.	+	.	Name=Ear_height;B73v2_pos=8:20919831;1allele=G/T;version=Hapmap2;RS=rs850261329;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	21518685	21518784	.	+	.	Name=Leaf_width;B73v2_pos=8:20921165;1allele=T/A;version=Hapmap2;RS=rs130723513;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	21522367	21522466	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:20924847;1allele=C/T;version=Hapmap2;RS=rs819671863;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	21553308	21553407	.	+	.	Name=Cob_diameter;B73v2_pos=8:20955700;1allele=A/G;version=Hapmap1;RS=rs131658352;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	21560897	21560996	.	+	.	Name=Ear_row_number;B73v2_pos=8:20963289;1allele=G/T;version=Hapmap2;RS=rs278460007;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	21574726	21574825	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:20977117;1allele=G/C;version=Hapmap2;RS=rs804998673;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	21574771	21574870	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:20977162;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	21883979	21884078	.	+	.	Name=Ear_row_number;B73v2_pos=8:21286382;1allele=C/T;version=Hapmap1;RS=rs131658626;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	21981754	21981853	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:21384405;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	21986001	21986100	.	+	.	Name=Leaf_width;B73v2_pos=8:21388600;1allele=C/T;version=Hapmap2;RS=rs278460608;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	21989212	21989311	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21391811;1allele=C/T;version=Hapmap2;RS=rs278460652;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	22031013	22031112	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21440149;1allele=G/A;version=Hapmap2;RS=rs278460856;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22037826	22037925	.	+	.	Name=Ear_height;B73v2_pos=8:21446962;1allele=A/G;version=Hapmap2;RS=rs822716920;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	22041111	22041210	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21450247;1allele=G/A;version=Hapmap2;RS=rs846987696;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22046182	22046281	.	+	.	Name=Ear_height;B73v2_pos=8:21454397;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	22129647	22129746	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21528915;1allele=C/A;version=Hapmap2;RS=rs841757639;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	22162498	22162597	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21576153;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	22177267	22177366	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21568847;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	22177338	22177437	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21568776;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	22318844	22318943	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:21769295;1allele=C/T;version=Hapmap2;RS=rs818787727;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	22409071	22409170	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:21823498;1allele=G/C;version=Hapmap2;RS=rs844133582;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	22432015	22432114	.	+	.	Name=Leaf_length;B73v2_pos=8:21846442;1allele=G/T;version=Hapmap1;RS=rs130724292;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	22454474	22454573	.	+	.	Name=Cob_diameter;B73v2_pos=8:21867091;1allele=C/A;version=Hapmap1;RS=rs131659278;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	22454964	22455063	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:21867581;1allele=A/G;version=Hapmap2;RS=rs815269288;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	22459021	22459120	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:21871638;1allele=C/A;version=Hapmap2;RS=rs1064495148;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	22459077	22459176	.	+	.	Name=Height_above_ear;B73v2_pos=8:21871694;1allele=A/G;version=Hapmap2;RS=rs278461332;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	22459146	22459245	.	+	.	Name=Plant_height;B73v2_pos=8:21871763;1allele=G/A;version=Hapmap1;RS=rs131659288;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22547943	22548042	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:21947882;1allele=A/G;version=Hapmap2;RS=rs825975054;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	22559055	22559154	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:21958995;1allele=A/G;version=Hapmap2;RS=rs832271353;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22587008	22587107	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:21986946;1allele=C/T;version=Hapmap2;RS=rs828732422;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	22590408	22590507	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:21990346;1allele=T/C;version=Hapmap2;RS=rs822659217;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	22590409	22590508	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:21990347;1allele=G/A;version=Hapmap2;RS=rs831502492;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22591049	22591148	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:21990987;1allele=A/T;version=Hapmap2;RS=rs130724366;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	22622149	22622248	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:22028761;1allele=C/T;version=Hapmap2;RS=rs822156360;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	22686213	22686312	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:22081190;1allele=T/C;version=Hapmap2;RS=rs827743277;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	22717569	22717668	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:22121953;1allele=C/A;version=Hapmap2;RS=rs130724433;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	22768125	22768224	.	+	.	Name=Plant_height;B73v2_pos=8:22164861;1allele=T/C;version=Hapmap2;RS=rs812099972;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	22769055	22769154	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:22165791;1allele=G/T;version=Hapmap2;RS=rs278461699;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	22770236	22770335	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:22166972;1allele=G/A;version=Hapmap2;RS=rs131659495;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22772903	22773002	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:22169639;1allele=G/A;version=Hapmap2;RS=rs813302416;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22777050	22777149	.	+	.	Name=Plant_height;B73v2_pos=8:22173786;1allele=G/A;version=Hapmap1;RS=rs131659472;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	22778397	22778496	.	+	.	Name=Plant_height;B73v2_pos=8:22175133;1allele=C/T;version=Hapmap2;RS=rs130724442;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	22780244	22780343	.	+	.	Name=Tassel_length;B73v2_pos=8:22176980;1allele=A/C;version=Hapmap2;RS=rs727400854;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	22787115	22787214	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:22189069;1allele=C/T;version=Hapmap1;RS=rs131659511;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	22819765	22819864	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:22213357;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	22826017	22826116	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:22229116;1allele=G/A;version=Hapmap2;RS=rs802266952;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	22855889	22855988	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:22259747;1allele=A/G;version=Hapmap2;RS=rs130724474;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	22916197	22916296	.	+	.	Name=Leaf_width;B73v2_pos=8:22325026;1allele=T/C;version=Hapmap2;RS=rs833883034;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	23044623	23044722	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:22440401;1allele=G/C;version=Hapmap2;RS=rs810992515;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	23060583	23060682	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:22462891;1allele=G/A;version=Hapmap2;RS=rs1061061832;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	23109553	23109652	.	+	.	Name=Plant_height;B73v2_pos=8:22505210;1allele=C/A;version=Hapmap2;RS=rs829813331;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	23109553	23109652	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:22505210;1allele=C/A;version=Hapmap2;RS=rs829813331;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	23109554	23109653	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:22505211;1allele=C/A;version=Hapmap2;RS=rs810963674;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	23109762	23109861	.	+	.	Name=Height_above_ear;B73v2_pos=8:22505419;1allele=A/G;version=Hapmap2;RS=rs836258978;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	23111789	23111888	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:22507450;1allele=A/G;version=Hapmap2;RS=rs809822745;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	23186383	23186482	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:22574163;1allele=G/C;version=Hapmap2;RS=rs804141831;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	23202416	23202515	.	+	.	Name=Ear_height;B73v2_pos=8:22590194;1allele=A/G;version=Hapmap2;RS=rs820601277;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	23253075	23253174	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:22640912;1allele=G/C;version=Hapmap1;RS=rs131660095;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	23263561	23263660	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:22651224;1allele=T/G;version=Hapmap2;RS=rs130724770;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	23272463	23272562	.	+	.	Name=Ear_height;B73v2_pos=8:22660127;1allele=G/A;version=Hapmap2;RS=rs839312660;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	23280488	23280587	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:22682015;1allele=T/C;version=Hapmap2;RS=rs131659837;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	23283346	23283445	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:22684873;1allele=C/A;version=Hapmap2;RS=rs832330593;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	23327566	23327665	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:22695662;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	23328836	23328935	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:22715722;1allele=G/A;version=Hapmap2;RS=rs825138291;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	23333201	23333300	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:22720087;1allele=T/G;version=Hapmap2;RS=rs816493262;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	23414852	23414951	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:22796905;1allele=C/T;version=Hapmap1;RS=rs131660214;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	23414852	23414951	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:22796905;1allele=C/T;version=Hapmap1;RS=rs131660214;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	23414974	23415073	.	+	.	Name=Ear_height;B73v2_pos=8:22797027;1allele=A/G;version=Hapmap2;RS=rs835501303;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	23476467	23476566	.	+	.	Name=Plant_height;B73v2_pos=8:22861312;1allele=T/C;version=Hapmap1;RS=rs131660360;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	23478756	23478855	.	+	.	Name=Ear_height;B73v2_pos=8:22863601;1allele=C/A;version=Hapmap2;RS=rs837352209;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	23478756	23478855	.	+	.	Name=Plant_height;B73v2_pos=8:22863601;1allele=C/A;version=Hapmap2;RS=rs837352209;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	23496355	23496454	.	+	.	Name=Ear_height;B73v2_pos=8:22881525;1allele=G/A;version=Hapmap1;RS=rs130725102;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	23503021	23503120	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:22888191;1allele=T/A;version=Hapmap2;RS=rs845769303;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	23507416	23507515	.	+	.	Name=Ear_height;B73v2_pos=8:22892587;1allele=A/T;version=Hapmap2;RS=rs838343005;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	23507629	23507728	.	+	.	Name=Plant_height;B73v2_pos=8:22892800;1allele=G/C;version=Hapmap2;RS=rs808669950;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	23538467	23538566	.	+	.	Name=Plant_height;B73v2_pos=8:22922782;1allele=C/T;version=Hapmap2;RS=rs819282534;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	23592810	23592909	.	+	.	Name=Ear_height;B73v2_pos=8:22974697;1allele=A/G;version=Hapmap2;RS=rs278463117;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	23703254	23703353	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:23079814;1allele=C/T;version=Hapmap2;RS=rs724781582;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	23703254	23703353	.	+	.	Name=Plant_height;B73v2_pos=8:23079814;1allele=C/T;version=Hapmap2;RS=rs724781582;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	23740456	23740555	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:23114534;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	23805576	23805675	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:23128967;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24045407	24045506	.	+	.	Name=Ear_height;B73v2_pos=8:23422301;1allele=T/C;version=Hapmap2;RS=rs278463425;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	24047570	24047669	.	+	.	Name=Ear_height;B73v2_pos=8:23424465;1allele=A/T;version=Hapmap2;RS=rs278463444;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	24114962	24115061	.	+	.	Name=Ear_height;B73v2_pos=8:23490853;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24120885	24120984	.	+	.	Name=Leaf_width;B73v2_pos=8:23496776;1allele=A/G;version=Hapmap2;RS=rs131660851;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	24239821	24239913	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:162756;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24319069	24319168	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:23666695;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24348764	24348863	.	+	.	Name=Plant_height;B73v2_pos=8:23713495;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24359137	24359236	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:23723872;1allele=G/C;version=Hapmap2;RS=rs801883829;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	24401236	24401335	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:23765976;1allele=T/G;version=Hapmap2;RS=rs822760118;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	24410073	24410172	.	+	.	Name=Ear_height;B73v2_pos=8:23774813;1allele=A/T;version=Hapmap2;RS=rs837453438;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	24573979	24574078	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:23889295;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24702092	24702191	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:24075861;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24704132	24704231	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:24073821;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24715590	24715689	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:23986408;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	24715844	24715943	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:23986662;1allele=A/T;version=Hapmap2;RS=rs831742378;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	24988597	24988696	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:24350478;1allele=T/G;version=Hapmap2;RS=rs836545141;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	25163323	25163422	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:24518510;1allele=G/A;version=Hapmap2;RS=rs727493702;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	25567427	25567526	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:24909830;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	25775512	25775611	.	+	.	Name=Cob_diameter;B73v2_pos=8:25124622;1allele=G/A;version=Hapmap2;RS=rs131662166;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	25778852	25778951	.	+	.	Name=Height_above_ear;B73v2_pos=8:25127962;1allele=C/T;version=Hapmap2;RS=rs725687963;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	25986829	25986928	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:25333420;1allele=T/C;version=Hapmap2;RS=rs810856710;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	25986847	25986946	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:25333438;1allele=A/G;version=Hapmap2;RS=rs845371357;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	25988282	25988381	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:25334873;1allele=A/T;version=Hapmap2;RS=rs278465157;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	26222979	26223078	.	+	.	Name=Plant_height;B73v2_pos=8:25565361;1allele=G/A;version=Hapmap2;RS=rs824178194;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	26269389	26269488	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:25618969;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	26285671	26285770	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:25635249;1allele=T/C;version=Hapmap2;RS=rs806837184;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	26302890	26302989	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:25652467;1allele=C/G;version=Hapmap2;RS=rs832735446;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	26588696	26588795	.	+	.	Name=Cob_diameter;B73v2_pos=8:25946151;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	26656486	26656585	.	+	.	Name=Cob_diameter;B73v2_pos=8:25997894;1allele=C/T;version=Hapmap2;RS=rs836737479;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	26703627	26703726	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:26045486;1allele=C/T;version=Hapmap1;RS=rs131662566;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	26759530	26759629	.	+	.	Name=Ear_height;B73v2_pos=8:26101383;1allele=G/A;version=Hapmap2;RS=rs821769301;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	26762143	26762242	.	+	.	Name=Ear_height;B73v2_pos=8:26103996;1allele=G/A;version=Hapmap2;RS=rs131662793;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	26806490	26806589	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:26148348;1allele=A/G;version=Hapmap2;RS=rs844632990;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	27041702	27041801	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:26351297;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	27321037	27321136	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:26622913;1allele=C/T;version=Hapmap2;RS=rs843078322;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	27323857	27323956	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:26625733;1allele=T/G;version=Hapmap2;RS=rs725598487;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	27323957	27324056	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:26625833;1allele=C/T;version=Hapmap2;RS=rs823301141;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	27323957	27324056	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:26625833;1allele=C/T;version=Hapmap2;RS=rs823301141;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	27324699	27324798	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:26626575;1allele=C/T;version=Hapmap2;RS=rs818807762;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	27325060	27325159	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:26626936;1allele=G/T;version=Hapmap2;RS=rs816924430;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	27326205	27326304	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:26628081;1allele=A/G;version=Hapmap2;RS=rs809775816;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	27352025	27352124	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:26663193;1allele=G/A;version=Hapmap1;RS=rs131664570;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	27442405	27442504	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:26749091;1allele=G/A;version=Hapmap2;RS=rs835379660;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	27459423	27459522	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:26766884;1allele=A/T;version=Hapmap2;RS=rs131664634;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	27473918	27474017	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:26771061;1allele=T/A;version=Hapmap2;RS=rs726807809;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	27576140	27576239	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:26870829;1allele=G/A;version=Hapmap2;RS=rs131664826;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	27801314	27801413	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:27091990;1allele=A/G;version=Hapmap2;RS=rs845486486;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	27831288	27831387	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:27121950;1allele=T/C;version=Hapmap2;RS=rs725032485;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	27935508	27935607	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:27214371;1allele=T/C;version=Hapmap2;RS=rs813669320;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	28153021	28153120	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:27399105;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	28162095	28162194	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:224402562;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	28185946	28186045	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:27432032;1allele=A/G;version=Hapmap2;RS=rs130727782;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	28195800	28195899	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:27441891;1allele=A/T;version=Hapmap2;RS=rs1064612166;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	28233985	28234084	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:27559206;1allele=T/G;version=Hapmap2;RS=rs130728191;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	28247025	28247124	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:27539710;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	28292554	28292653	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:27471533;1allele=G/T;version=Hapmap2;RS=rs130727956;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	28551731	28551830	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:27788184;1allele=C/T;version=Hapmap2;RS=rs278467626;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	29104567	29104666	.	+	.	Name=Cob_diameter;B73v2_pos=8:28324677;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	29247893	29247992	.	+	.	Name=Tassel_length;B73v2_pos=8:28469658;1allele=A/T;version=Hapmap2;RS=rs834002149;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	29300654	29300753	.	+	.	Name=Leaf_width;B73v2_pos=3:176871924;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	29311609	29311708	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:28558300;1allele=C/T;version=Hapmap2;RS=rs1062056225;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	29547955	29548054	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:28753488;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	30302601	30302700	.	+	.	Name=Glucose;B73v2_pos=8:29498140;1allele=G/T;version=Hapmap2;RS=rs835040704;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	30388631	30388730	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:29584182;1allele=C/A;version=Hapmap2;RS=rs278470049;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	30388631	30388730	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:29584182;1allele=C/A;version=Hapmap2;RS=rs278470049;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	30834180	30834279	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:29995078;1allele=C/T;version=Hapmap2;RS=rs130731631;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	31109849	31109948	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:30283212;1allele=G/A;version=Hapmap2;RS=rs1063844738;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	32238949	32239048	.	+	.	Name=Leaf_width;B73v2_pos=8:31361807;1allele=A/G;version=Hapmap2;RS=rs837303686;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	32505451	32505550	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:31623703;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	32546074	32546173	.	+	.	Name=Height_above_ear;B73v2_pos=8:31663976;1allele=A/G;version=Hapmap2;RS=rs820450993;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	32638853	32638952	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:31757084;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	32906507	32906606	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:32025417;1allele=A/G;version=Hapmap2;RS=rs823753016;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	32912168	32912267	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:32031079;1allele=C/A;version=Hapmap2;RS=rs278471862;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	33885477	33885576	.	+	.	Name=Tassel_length;B73v2_pos=8:32976426;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	33946666	33946765	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:33017823;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	33947677	33947776	.	+	.	Name=Cob_diameter;B73v2_pos=8:33016812;1allele=A/C;version=Hapmap2;RS=rs802837347;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	33981077	33981176	.	+	.	Name=Cob_diameter;B73v2_pos=8:33072969;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	34002411	34002510	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:33093912;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	34051002	34051101	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:33142508;1allele=A/G;version=Hapmap2;RS=rs1062955807;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	34068162	34068261	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:33154141;1allele=T/C;version=Hapmap2;RS=rs835265333;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	34306518	34306617	.	+	.	Name=Tassel_length;B73v2_pos=8:33412275;1allele=C/T;version=Hapmap2;RS=rs829541661;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	34372364	34372463	.	+	.	Name=Tassel_length;B73v2_pos=8:33457925;1allele=C/T;version=Hapmap2;RS=rs821448763;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	34386651	34386750	.	+	.	Name=Plant_height;B73v2_pos=8:33472215;1allele=C/T;version=Hapmap2;RS=rs812867753;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	34437178	34437277	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:33522451;1allele=T/C;version=Hapmap2;RS=rs130739015;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	34500377	34500476	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:33584975;1allele=G/C;version=Hapmap1;RS=rs131665649;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	34611343	34611442	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:33696645;1allele=C/T;version=Hapmap2;RS=rs810385205;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	34762868	34762967	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:33855962;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	35083486	35083585	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:34214572;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	35173212	35173311	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:34231711;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	35510614	35510713	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:34579234;1allele=A/G;version=Hapmap2;RS=rs848290822;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	35616191	35616290	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:34682486;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	35616778	35616877	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:34683073;1allele=G/C;version=Hapmap2;RS=rs811754813;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	36756170	36756269	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:35788474;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	36834244	36834343	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:35891954;1allele=G/T;version=Hapmap2;RS=rs843905182;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	36894904	36895003	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:35920279;1allele=G/T;version=Hapmap2;RS=rs825131158;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	37208967	37209066	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:36230886;1allele=A/G;version=Hapmap2;RS=rs130745871;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	37508997	37509096	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:182821841;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	37983365	37983464	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:36978627;1allele=C/T;version=Hapmap2;RS=rs806419946;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	38599794	38599893	.	+	.	Name=Stalk_strength;B73v2_pos=8:37596519;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	38675350	38675449	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:37675076;1allele=C/A;version=Hapmap2;RS=rs838429460;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	38676674	38676773	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:37676400;1allele=T/C;version=Hapmap2;RS=rs831719170;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	38755870	38755969	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:37759875;1allele=G/A;version=Hapmap2;RS=rs278480874;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	38995035	38995134	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:37939305;1allele=T/G;version=Hapmap2;RS=rs278481145;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	39237136	39237235	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:38170754;1allele=G/A;version=Hapmap2;RS=rs1063204278;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	39407049	39407148	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:38344509;1allele=A/G;version=Hapmap2;RS=rs1063121997;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	39541068	39541167	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:21135728;1allele=C/T;version=Hapmap2;RS=rs1060862605;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	40163252	40163351	.	+	.	Name=Tassel_length;B73v2_pos=8:39089895;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	40513951	40514050	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:39436022;1allele=A/T;version=Hapmap2;RS=rs831357482;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	40530228	40530327	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:39387784;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	40530303	40530402	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:39387709;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	40535398	40535497	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:39450936;1allele=A/G;version=Hapmap2;RS=rs278483264;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	40742730	40742829	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:39695871;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	40957199	40957298	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:39869215;1allele=C/A;version=Hapmap2;RS=rs278484450;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	40967749	40967848	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:39879766;1allele=C/T;version=Hapmap2;RS=rs805379501;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	40999357	40999456	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:39911561;1allele=T/G;version=Hapmap2;RS=rs844316504;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	42085447	42085546	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:31069269;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	42638119	42638218	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:83062156;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	42683602	42683701	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:41567871;1allele=C/T;version=Hapmap2;RS=rs1060985506;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	47039853	47039952	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:11289188;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	47231668	47231767	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:46042701;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	48165441	48165540	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:46964634;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	48821165	48821264	.	+	.	Name=Leaf_width;B73v2_pos=1:159274278;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	51711083	51711182	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:50658497;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	53667641	53667740	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:52712031;1allele=T/C;version=Hapmap2;RS=rs836682417;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	53877129	53877228	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:52953127;1allele=T/A;version=Hapmap2;RS=rs822988973;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	53948030	53948130	.	+	.	Name=Height_above_ear;B73v2_pos=4:209990821;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	54180989	54181088	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:53204765;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	55834151	55834250	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:54878220;1allele=C/T;version=Hapmap2;RS=rs278496744;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	56056562	56056661	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:55096421;1allele=A/G;version=Hapmap2;RS=rs810007199;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	56812987	56813086	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:124901540;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	58143977	58144076	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:177369761;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	58183395	58183494	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:57136995;1allele=C/T;version=Hapmap2;RS=rs130765966;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	61169120	61169219	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:60136585;1allele=G/A;version=Hapmap2;RS=rs726634715;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	61540012	61540111	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:60505420;1allele=T/C;version=Hapmap2;RS=rs822274017;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	61762844	61762943	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:60700482;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	61884996	61885095	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:60817969;1allele=G/A;version=Hapmap2;RS=rs130770574;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	62125599	62125698	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:61055970;1allele=C/T;version=Hapmap2;RS=rs130771358;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	62251740	62251839	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:61188684;1allele=C/T;version=Hapmap2;RS=rs130771716;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	62344604	62344703	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:61282193;1allele=G/A;version=Hapmap2;RS=rs842338897;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	62439986	62440085	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:61400772;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	62510836	62510935	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:61448038;1allele=A/G;version=Hapmap2;RS=rs1063918887;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	62513937	62514036	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:61450374;1allele=G/A;version=Hapmap2;RS=rs278503883;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	62542214	62542313	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:61478654;1allele=G/A;version=Hapmap2;RS=rs725260411;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	62543130	62543229	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:61479570;1allele=A/G;version=Hapmap2;RS=rs1064081479;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	62929775	62929874	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:61838663;1allele=T/C;version=Hapmap2;RS=rs278504469;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	63043843	63043942	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:61952737;1allele=C/T;version=Hapmap2;RS=rs816364534;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	63096239	63096338	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:61999376;1allele=G/C;version=Hapmap2;RS=rs806928478;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	63146713	63146812	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:62049865;1allele=G/A;version=Hapmap2;RS=rs130773128;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	63296827	63296926	.	+	.	Name=Leaf_length;B73v2_pos=8:62192296;1allele=C/T;version=Hapmap2;RS=rs801977387;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	63321855	63321954	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:62217745;1allele=T/A;version=Hapmap2;RS=rs1062237008;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	63367934	63368033	.	+	.	Name=Leaf_length;B73v2_pos=8:62263162;1allele=G/A;version=Hapmap2;RS=rs726279514;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	63487620	63487719	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:62425253;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	63512750	63512849	.	+	.	Name=Height_above_ear;B73v2_pos=8:62448732;1allele=A/G;version=Hapmap2;RS=rs846657858;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	63519605	63519704	.	+	.	Name=Height_above_ear;B73v2_pos=8:62455587;1allele=G/T;version=Hapmap2;RS=rs726199059;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	63564751	63564850	.	+	.	Name=Leaf_length;B73v2_pos=8:62514863;1allele=T/A;version=Hapmap2;RS=rs278506380;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	63616742	63616841	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:62551504;1allele=A/G;version=Hapmap2;RS=rs843601716;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	63622932	63623031	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:62557694;1allele=G/A;version=Hapmap2;RS=rs278506481;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	63636865	63636964	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:62571628;1allele=A/G;version=Hapmap2;RS=rs131673036;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	63673548	63673647	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:62608286;1allele=T/C;version=Hapmap2;RS=rs278506616;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	63725085	63725184	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:62661099;1allele=G/A;version=Hapmap2;RS=rs130775252;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	63837994	63838093	.	+	.	Name=Tassel_length;B73v2_pos=8:62783753;1allele=T/C;version=Hapmap2;RS=rs829572000;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	63881176	63881275	.	+	.	Name=Tassel_length;B73v2_pos=8:62819256;1allele=T/C;version=Hapmap2;RS=rs849785450;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	63908258	63908357	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:62846338;1allele=C/A;version=Hapmap2;RS=rs834025677;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	64000052	64000151	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:62918029;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	64037564	64037663	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:62978151;1allele=C/G;version=Hapmap2;RS=rs131673194;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	64319414	64319513	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:63264690;1allele=G/A;version=Hapmap2;RS=rs813933568;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	64336533	64336632	.	+	.	Name=Tassel_length;B73v2_pos=8:63281807;1allele=A/G;version=Hapmap2;RS=rs824114479;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	64337358	64337457	.	+	.	Name=Tassel_length;B73v2_pos=8:63282632;1allele=T/C;version=Hapmap2;RS=rs820809829;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	64369231	64369330	.	+	.	Name=Tassel_length;B73v2_pos=8:63312853;1allele=A/G;version=Hapmap2;RS=rs832829340;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	64997066	64997165	.	+	.	Name=Tassel_length;B73v2_pos=8:64506701;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	65035382	65035481	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:64461019;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	65041282	65041381	.	+	.	Name=Tassel_length;B73v2_pos=8:64455119;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	65193055	65193154	.	+	.	Name=Leaf_width;B73v2_pos=8:64293938;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	65388647	65388746	.	+	.	Name=Tassel_length;B73v2_pos=8:64107128;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	65621777	65621876	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:63883692;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	65959356	65959455	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:64705019;1allele=G/A;version=Hapmap2;RS=rs811853523;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	65960498	65960597	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:64706161;1allele=A/T;version=Hapmap2;RS=rs810936187;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	66415622	66415721	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:65153639;1allele=G/A;version=Hapmap2;RS=rs1061992570;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	66604964	66605063	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:65347602;1allele=G/A;version=Hapmap2;RS=rs807529267;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	67027636	67027735	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:65773586;1allele=C/T;version=Hapmap2;RS=rs832448550;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	67350354	67350453	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:66093741;1allele=G/A;version=Hapmap2;RS=rs130780313;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	67408803	67408902	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:66150236;1allele=A/G;version=Hapmap2;RS=rs830466863;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	67552119	67552218	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:66294173;1allele=A/G;version=Hapmap2;RS=rs835219454;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	67561087	67561186	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:66303141;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	67597340	67597439	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:66340885;1allele=T/A;version=Hapmap2;RS=rs1061543680;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	67734053	67734152	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:66473072;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	67827530	67827629	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:66557865;1allele=G/A;version=Hapmap2;RS=rs816653149;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	68744724	68744823	.	+	.	Name=Total_amino_acids;B73v2_pos=8:67492713;1allele=A/C;version=Hapmap2;RS=rs842955761;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	68752915	68753014	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:67502893;1allele=T/C;version=Hapmap2;RS=rs835779697;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	68776523	68776622	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:67523125;1allele=A/T;version=Hapmap2;RS=rs850396378;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	68805949	68806048	.	+	.	Name=Total_amino_acids;B73v2_pos=8:67545647;1allele=A/G;version=Hapmap2;RS=rs1060882886;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	69004781	69004880	.	+	.	Name=Total_amino_acids;B73v2_pos=8:67733582;1allele=T/G;version=Hapmap2;RS=rs278509559;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	69196099	69196198	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:68038666;1allele=C/T;version=Hapmap2;RS=rs809506596;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	69357137	69357236	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:68088046;1allele=T/A;version=Hapmap2;RS=rs725404078;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	69756128	69756227	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:68498851;1allele=T/C;version=Hapmap2;RS=rs824659734;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	69769313	69769411	.	+	.	Name=Days_to_silk;B73v2_pos=8:68512038;1allele=C/T;version=Hapmap2;RS=rs839292847;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	70028521	70028620	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:68773158;1allele=C/T;version=Hapmap2;RS=rs818590932;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	70039085	70039184	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:68783728;1allele=A/T;version=Hapmap2;RS=rs1064564557;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	70042871	70042970	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:68787514;1allele=G/A;version=Hapmap2;RS=rs826894967;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	70133051	70133150	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:68876643;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	70149553	70149652	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:158814887;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	72030226	72030325	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:70749196;1allele=C/T;version=Hapmap2;RS=rs814470843;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	72183429	72183528	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:70893438;1allele=C/T;version=Hapmap2;RS=rs808460298;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	72302751	72302850	.	+	.	Name=Days_to_silk;B73v2_pos=8:71010833;1allele=G/A;version=Hapmap2;RS=rs841188784;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	72356436	72356535	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:71064528;1allele=G/A;version=Hapmap2;RS=rs823308986;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	72433409	72433508	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:71135407;1allele=A/G;version=Hapmap2;RS=rs130784635;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	72471765	72471864	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:71173765;1allele=G/A;version=Hapmap2;RS=rs806569890;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	72471848	72471947	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:71173848;1allele=G/A;version=Hapmap2;RS=rs820204199;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	72474436	72474535	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:71176436;1allele=G/A;version=Hapmap2;RS=rs813541967;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	72492303	72492402	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:71194304;1allele=G/C;version=Hapmap2;RS=rs827897550;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	72924719	72924818	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:71612798;1allele=C/T;version=Hapmap2;RS=rs130785420;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	73096035	73096134	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:71774729;1allele=G/A;version=Hapmap2;RS=rs130785557;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	73187483	73187582	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:71865650;1allele=C/T;version=Hapmap2;RS=rs1063811434;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	73212746	73212845	.	+	.	Name=Days_to_silk;B73v2_pos=8:71926345;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	73296566	73296665	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:71975532;1allele=A/G;version=Hapmap1;RS=rs822211065;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	73368479	73368578	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:72048201;1allele=G/A;version=Hapmap2;RS=rs1061468955;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	73421590	73421689	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:72098547;1allele=G/T;version=Hapmap2;RS=rs820574159;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	73441629	73441728	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:72111554;1allele=T/C;version=Hapmap2;RS=rs804742457;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	73657557	73657656	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64832024;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	73721836	73721935	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:72387941;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	73725773	73725872	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:72384004;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	74119262	74119361	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:72775710;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	74289244	74289343	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:72899320;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	74477903	74478002	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:73088500;1allele=cnv;version=CNV_genic;RS=rs278513152;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	74519566	74519665	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=5:201656141;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	75135741	75135840	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:73749269;1allele=G/A;version=Hapmap2;RS=rs130787745;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	75173781	75173880	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:73861371;1allele=T/C;version=Hapmap2;RS=rs818182310;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	75287755	75287854	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:73892241;1allele=C/T;version=Hapmap2;RS=rs849330990;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	75682108	75682207	.	+	.	Name=Leaf_length;B73v2_pos=8:74274549;1allele=G/A;version=Hapmap2;RS=rs130788606;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	76096645	76096744	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:74689640;1allele=C/T;version=Hapmap2;RS=rs837207079;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	76176086	76176185	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:74769338;1allele=A/C;version=Hapmap2;RS=rs1064567832;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	76424862	76424961	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:74851218;1allele=G/C;version=Hapmap2;RS=rs831102923;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	76475221	76475320	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:74907952;1allele=A/G;version=Hapmap2;RS=rs820057594;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	76478420	76478519	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:74911152;1allele=A/G;version=Hapmap2;RS=rs833114025;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	76591880	76591979	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:75030440;1allele=A/C;version=Hapmap2;RS=rs130789967;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	76619864	76619963	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75058168;1allele=C/T;version=Hapmap2;RS=rs130790016;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	76659447	76659546	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75112790;1allele=T/C;version=Hapmap2;RS=rs278514866;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	76675938	76676037	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:75133166;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	76677483	76677582	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:75131621;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	76859749	76859848	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:75304155;1allele=C/G;version=Hapmap1;RS=rs131679414;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	76870601	76870700	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75314639;1allele=A/G;version=Hapmap2;RS=rs278515125;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	76870701	76870800	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:75314739;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	76877549	76877648	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:75321587;1allele=T/G;version=Hapmap2;RS=rs845089879;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	76878889	76878988	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:75322927;1allele=G/A;version=Hapmap2;RS=rs816591814;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	76974443	76974542	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:75415273;1allele=C/G;version=Hapmap2;RS=rs130790742;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	77163993	77164092	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75602439;1allele=G/A;version=Hapmap2;RS=rs824505107;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	77203622	77203721	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:75642067;1allele=A/C;version=Hapmap2;RS=rs825286783;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	77205517	77205616	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75643962;1allele=A/G;version=Hapmap1;RS=rs130791002;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	77212397	77212496	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:75650835;1allele=T/C;version=Hapmap2;RS=rs803575086;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	77229024	77229123	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75667464;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	77367795	77367894	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75820651;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	77542214	77542313	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:75990746;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	77588958	77589057	.	+	.	Name=Leaf_width;B73v2_pos=8:76037411;1allele=C/T;version=Hapmap2;RS=rs278515781;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	77708676	77708775	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:76161413;1allele=G/T;version=Hapmap2;RS=rs1064493413;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	78807362	78807461	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:77226881;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	78890903	78891002	.	+	.	Name=Leaf_length;B73v2_pos=8:77310803;1allele=G/A;version=Hapmap2;RS=rs1060974597;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	79936564	79936663	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:78368880;1allele=G/C;version=Hapmap2;RS=rs278517168;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	79971860	79971960	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:78404349;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	79983165	79983264	.	+	.	Name=Ear_height;B73v2_pos=8:78415654;1allele=A/T;version=Hapmap2;RS=rs822105751;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	80371798	80371897	.	+	.	Name=Stalk_strength;B73v2_pos=3:176275588;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	80433517	80433616	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:78869446;1allele=A/G;version=Hapmap2;RS=rs847012304;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	80433517	80433616	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:78869446;1allele=A/G;version=Hapmap2;RS=rs847012304;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	80665335	80665434	.	+	.	Name=Plant_height;B73v2_pos=6:26466545;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	80888315	80888414	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:79340114;1allele=C/T;version=Hapmap2;RS=rs131680979;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	80889257	80889356	.	+	.	Name=Leaf_length;B73v2_pos=8:79341056;1allele=A/G;version=Hapmap2;RS=rs278517715;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	81503390	81503489	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:79917242;1allele=A/G;version=Hapmap2;RS=rs1061812852;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	81553357	81553456	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:79962198;1allele=T/C;version=Hapmap2;RS=rs839992369;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	81553357	81553456	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:79962198;1allele=T/C;version=Hapmap2;RS=rs839992369;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	81662936	81663035	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:79999427;1allele=T/C;version=Hapmap2;RS=rs816082131;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	81671631	81671730	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:80008132;1allele=A/T;version=Hapmap2;RS=rs816762319;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	81830094	81830193	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:80168093;1allele=C/T;version=Hapmap2;RS=rs833928183;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	81857181	81857280	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:80195186;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	81859225	81859324	.	+	.	Name=Leaf_length;B73v2_pos=8:80197230;1allele=C/T;version=Hapmap1;RS=rs131681296;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	81888618	81888717	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:80222262;1allele=T/G;version=Hapmap2;RS=rs278518788;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	82004812	82004911	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:80341790;1allele=A/C;version=Hapmap2;RS=rs278518953;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	82007786	82007885	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:80344764;1allele=T/C;version=Hapmap2;RS=rs811172298;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	82012596	82012695	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:80349863;1allele=T/C;version=Hapmap2;RS=rs1063353322;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	82131276	82131375	.	+	.	Name=Ear_height;B73v2_pos=8:80452649;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	82214513	82214612	.	+	.	Name=Height_above_ear;B73v2_pos=8:80673691;1allele=G/A;version=Hapmap2;RS=rs130796430;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82390266	82390365	.	+	.	Name=Plant_height;B73v2_pos=8:80728393;1allele=A/G;version=Hapmap2;RS=rs804959947;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82497782	82497881	.	+	.	Name=Ear_height;B73v2_pos=8:80836134;1allele=G/A;version=Hapmap2;RS=rs1064364696;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82533842	82533941	.	+	.	Name=Ear_height;B73v2_pos=8:80852262;1allele=G/A;version=Hapmap2;RS=rs130796742;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82603893	82603992	.	+	.	Name=Leaf_length;B73v2_pos=8:81032850;1allele=G/A;version=Hapmap2;RS=rs816884412;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	82603999	82604098	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:81032956;1allele=A/G;version=Hapmap2;RS=rs278519655;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82646541	82646640	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:81075502;1allele=A/G;version=Hapmap2;RS=rs1064730499;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82646747	82646846	.	+	.	Name=Ear_height;B73v2_pos=8:81075708;1allele=A/G;version=Hapmap2;RS=rs843579585;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	82659861	82659960	.	+	.	Name=Ear_height;B73v2_pos=8:81088822;1allele=T/C;version=Hapmap2;RS=rs1063771633;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	82659861	82659960	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:81088822;1allele=T/C;version=Hapmap2;RS=rs1063771633;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	82665110	82665209	.	+	.	Name=Leaf_length;B73v2_pos=8:81094072;1allele=A/G;version=Hapmap2;RS=rs1062345734;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82713949	82714048	.	+	.	Name=Leaf_length;B73v2_pos=8:81142880;1allele=A/G;version=Hapmap2;RS=rs1063050996;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	82719130	82719229	.	+	.	Name=Leaf_length;B73v2_pos=8:81148061;1allele=C/T;version=Hapmap2;RS=rs817881670;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	82726793	82726892	.	+	.	Name=Leaf_length;B73v2_pos=8:81155724;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	82727483	82727582	.	+	.	Name=Leaf_length;B73v2_pos=8:81156414;1allele=A/T;version=Hapmap2;RS=rs1061962568;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	82728636	82728735	.	+	.	Name=Ear_height;B73v2_pos=8:81157567;1allele=G/A;version=Hapmap2;RS=rs831176887;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	82743368	82743467	.	+	.	Name=Ear_height;B73v2_pos=8:81172304;1allele=C/T;version=Hapmap1;RS=rs131681781;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	83279195	83279294	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:81650471;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	83279196	83279295	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:81650470;1allele=C/T;version=Hapmap2;RS=rs278520332;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	83279196	83279295	.	+	.	Name=Plant_height;B73v2_pos=8:81650470;1allele=C/T;version=Hapmap2;RS=rs278520332;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	83297329	83297428	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:81632368;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	83342729	83342828	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:81697123;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	83402841	83402940	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=4:71368596;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	83547415	83547514	.	+	.	Name=Days_to_silk;B73v2_pos=1:234914323;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	83873191	83873290	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:82222937;1allele=T/C;version=Hapmap2;RS=rs805186803;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	83876573	83876672	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:82226321;1allele=G/A;version=Hapmap2;RS=rs130798550;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	83877385	83877484	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:82227133;1allele=A/G;version=Hapmap2;RS=rs801582375;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	84033734	84033833	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:82381395;1allele=A/G;version=Hapmap2;RS=rs278521124;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	84042600	84042699	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:82390270;1allele=A/G;version=Hapmap2;RS=rs130798664;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	84059449	84059548	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:82407125;1allele=G/A;version=Hapmap1;RS=rs131682035;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	84086438	84086537	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:82434119;1allele=C/A;version=Hapmap2;RS=rs278521360;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	84094909	84095008	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:82442590;1allele=C/A;version=Hapmap2;RS=rs130798895;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	84099756	84099855	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:82447437;1allele=C/T;version=Hapmap2;RS=rs813929884;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	84099959	84100058	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:82447640;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	84164568	84164667	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:82512327;1allele=A/G;version=Hapmap2;RS=rs130799310;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	85138465	85138564	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:83441981;1allele=A/C;version=Hapmap2;RS=rs724652946;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	85159095	85159194	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:83462310;1allele=A/G;version=Hapmap2;RS=rs724598801;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	85420964	85421063	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:83715506;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	85535532	85535631	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:83824129;1allele=C/T;version=Hapmap2;RS=rs828716738;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	85535532	85535631	.	+	.	Name=Plant_height;B73v2_pos=8:83824129;1allele=C/T;version=Hapmap2;RS=rs828716738;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	85641087	85641186	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:83930565;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	85683242	85683341	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:83971281;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	85938286	85938385	.	+	.	Name=Plant_height;B73v2_pos=8:84244407;1allele=T/G;version=Hapmap2;RS=rs818710870;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	85960433	85960532	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:16187167;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	86097275	86097374	.	+	.	Name=Ear_height;B73v2_pos=8:84400224;1allele=G/T;version=Hapmap2;RS=rs1063460955;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	86292881	86292980	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:84596488;1allele=G/A;version=Hapmap2;RS=rs822890173;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	86822707	86822806	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:85123531;1allele=C/A;version=Hapmap1;RS=rs131682841;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	86860733	86860832	.	+	.	Name=Plant_height;B73v2_pos=8:85166487;1allele=T/C;version=Hapmap2;RS=rs812756601;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	86888427	86888526	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:85193942;1allele=G/A;version=Hapmap2;RS=rs838110858;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	87035457	87035556	.	+	.	Name=Plant_height;B73v2_pos=8:85330273;1allele=A/G;version=Hapmap2;RS=rs838179698;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	87111356	87111455	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:85402936;1allele=A/C;version=Hapmap2;RS=rs811772107;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	87215570	87215669	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:85519602;1allele=A/C;version=Hapmap2;RS=rs835558665;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	87238885	87238984	.	+	.	Name=Plant_height;B73v2_pos=8:85535151;1allele=A/G;version=Hapmap2;RS=rs827690867;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	87248236	87248335	.	+	.	Name=Plant_height;B73v2_pos=8:85544502;1allele=A/G;version=Hapmap2;RS=rs835942503;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	87580017	87580116	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:85842825;1allele=T/G;version=Hapmap2;RS=rs833263887;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	87737668	87737767	.	+	.	Name=Plant_height;B73v2_pos=8:86027704;1allele=T/A;version=Hapmap2;RS=rs832835552;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	87779249	87779348	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:86065872;1allele=A/T;version=Hapmap2;RS=rs804640722;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	87846119	87846218	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:86235445;1allele=G/A;version=Hapmap2;RS=rs847815476;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	87868730	87868829	.	+	.	Name=Plant_height;B73v2_pos=8:86129349;1allele=C/T;version=Hapmap2;RS=rs824809438;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	87885358	87885457	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:86145979;1allele=G/A;version=Hapmap2;RS=rs819205998;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	87917980	87918079	.	+	.	Name=Plant_height;B73v2_pos=8:86177980;1allele=G/A;version=Hapmap2;RS=rs849520529;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	88058498	88058597	.	+	.	Name=Plant_height;B73v2_pos=8:86353265;1allele=T/C;version=Hapmap2;RS=rs837805849;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	88094983	88095082	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:86389755;1allele=G/A;version=Hapmap2;RS=rs1062903912;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	88184052	88184151	.	+	.	Name=Plant_height;B73v2_pos=8:86478452;1allele=G/A;version=Hapmap2;RS=rs849647846;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	88336896	88336995	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:86514225;1allele=A/C;version=Hapmap2;RS=rs803848246;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	88464127	88464226	.	+	.	Name=Plant_height;B73v2_pos=8:86642298;1allele=T/C;version=Hapmap2;RS=rs840144663;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	88502195	88502294	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:86679600;1allele=C/T;version=Hapmap2;RS=rs814792229;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	88580633	88580732	.	+	.	Name=Plant_height;B73v2_pos=8:86761622;1allele=A/G;version=Hapmap2;RS=rs837920857;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	88843081	88843180	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:87029633;1allele=C/G;version=Hapmap2;RS=rs812957190;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	88858650	88858750	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:87050692;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	88891109	88891208	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:87083247;1allele=A/G;version=Hapmap2;RS=rs278526311;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	88902808	88902907	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:87094944;1allele=G/C;version=Hapmap2;RS=rs805559670;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	89046470	89046569	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:87238606;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	89115099	89115198	.	+	.	Name=Leaf_length;B73v2_pos=8:87307244;1allele=C/T;version=Hapmap2;RS=rs278526496;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	89117733	89117832	.	+	.	Name=Ear_height;B73v2_pos=8:87309878;1allele=G/A;version=Hapmap2;RS=rs724746215;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	89119247	89119346	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:87311392;1allele=A/T;version=Hapmap2;RS=rs278526523;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	89121863	89121962	.	+	.	Name=Leaf_length;B73v2_pos=8:87314009;1allele=T/C;version=Hapmap2;RS=rs834984656;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	89121877	89121976	.	+	.	Name=Tassel_length;B73v2_pos=8:87314023;1allele=T/C;version=Hapmap2;RS=rs842312616;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	89299314	89299413	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:87500937;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	89302682	89302781	.	+	.	Name=Ear_height;B73v2_pos=8:87497569;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	89306213	89306312	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:87494038;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	89346009	89346108	.	+	.	Name=Plant_height;B73v2_pos=8:87476032;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	89375079	89375178	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:87546139;1allele=G/T;version=Hapmap2;RS=rs131683169;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	89566038	89566137	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:87782100;1allele=G/A;version=Hapmap2;RS=rs823483066;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	89566221	89566320	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:87782283;1allele=T/C;version=Hapmap2;RS=rs1061104557;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	89829757	89829855	.	+	.	Name=Days_to_silk;B73v2_pos=8:88035893;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	90185649	90185748	.	+	.	Name=Nodes_to_ear;B73v2_pos=1:183226722;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	90332600	90332699	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:88561926;1allele=A/G;version=Hapmap2;RS=rs820356289;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	90375371	90375470	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:188370627;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	90375371	90375470	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:188370627;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	90496411	90496510	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:38654825;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	90821491	90821590	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:89011190;1allele=A/G;version=Hapmap2;RS=rs847951751;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	91261305	91261404	.	+	.	Name=Plant_height;B73v2_pos=8:89444997;1allele=C/A;version=Hapmap2;RS=rs816790310;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	91342637	91342736	.	+	.	Name=Leaf_width;B73v2_pos=8:89502944;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	91840548	91840647	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:90008026;1allele=G/A;version=Hapmap2;RS=rs804470347;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	92029484	92029583	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:90220873;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	92208997	92209096	.	+	.	Name=Ear_height;B73v2_pos=8:90361958;1allele=C/T;version=Hapmap2;RS=rs130811199;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	92241226	92241325	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:90394329;1allele=A/G;version=Hapmap2;RS=rs832102544;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	92373229	92373328	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:90490382;1allele=C/A;version=Hapmap2;RS=rs847355302;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	92410190	92410289	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:90573832;1allele=T/G;version=Hapmap2;RS=rs838133687;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	92620543	92620642	.	+	.	Name=Height_above_ear;B73v2_pos=8:90788724;1allele=A/C;version=Hapmap2;RS=rs824487365;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	92623268	92623367	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:90791445;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	93216948	93217047	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:91394518;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	93218831	93218930	.	+	.	Name=Leaf_length;B73v2_pos=8:91419962;1allele=C/A;version=Hapmap2;RS=rs815888529;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	93321731	93321830	.	+	.	Name=Height_above_ear;B73v2_pos=8:91484011;1allele=A/G;version=Hapmap2;RS=rs841299519;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	93628335	93628434	.	+	.	Name=Starch;B73v2_pos=7:24142394;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	93648199	93648298	.	+	.	Name=Ear_height;B73v2_pos=8:91905164;1allele=+/-;version=Hapmap2;RS=rs849370487;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	93698690	93698789	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:91935982;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	93728425	93728524	.	+	.	Name=Ear_height;B73v2_pos=8:91965173;1allele=T/C;version=Hapmap2;RS=rs278530395;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	93729247	93729346	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:91965995;1allele=T/G;version=Hapmap2;RS=rs278530416;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	93729247	93729346	.	+	.	Name=Ear_height;B73v2_pos=8:91965995;1allele=T/G;version=Hapmap2;RS=rs278530416;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	93731287	93731386	.	+	.	Name=Ear_height;B73v2_pos=8:91968035;1allele=G/A;version=Hapmap2;RS=rs1061193358;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	93731287	93731386	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:91968035;1allele=G/A;version=Hapmap2;RS=rs1061193358;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	93732365	93732464	.	+	.	Name=Leaf_length;B73v2_pos=8:91969113;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	93746113	93746212	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:91981332;1allele=T/C;version=Hapmap2;RS=rs825077325;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	93753603	93753702	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:91988823;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	93788065	93788164	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:92025212;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	93830193	93830292	.	+	.	Name=Leaf_length;B73v2_pos=8:92010816;1allele=C/T;version=Hapmap2;RS=rs130813722;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	93966316	93966415	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:92194049;1allele=T/A;version=Hapmap2;RS=rs1063634155;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	93976609	93976708	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:92204346;1allele=G/A;version=Hapmap2;RS=rs1060640535;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	94081218	94081317	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:92322880;1allele=C/T;version=Hapmap2;RS=rs130814232;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	94238187	94238286	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:92481351;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	94377829	94377928	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:92620747;1allele=G/A;version=Hapmap2;RS=rs130814686;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	94477979	94478078	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:92722308;1allele=C/A;version=Hapmap2;RS=rs812891446;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	94885524	94885623	.	+	.	Name=Ear_height;B73v2_pos=8:93122041;1allele=G/A;version=Hapmap2;RS=rs278531369;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	95107412	95107511	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:93347588;1allele=C/T;version=Hapmap2;RS=rs130815204;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	95730847	95730946	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:93970516;1allele=G/A;version=Hapmap2;RS=rs1063982947;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	95744580	95744679	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=7:110097807;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	95967072	95967171	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:94211819;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	96179225	96179324	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:94437152;1allele=G/C;version=Hapmap1;RS=rs130816679;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	96183451	96183550	.	+	.	Name=Leaf_length;B73v2_pos=8:97827521;1allele=A/G;version=Hapmap2;RS=rs818017767;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	96239851	96239950	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:94499830;1allele=G/A;version=Hapmap2;RS=rs1060985887;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	96774505	96774604	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=6:96510047;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	96796882	96796981	.	+	.	Name=Leaf_length;B73v2_pos=8:95041748;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	96848765	96848864	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:95093304;1allele=T/C;version=Hapmap2;RS=rs840832069;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	97316583	97316682	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:95582059;1allele=A/G;version=Hapmap2;RS=rs278534025;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	97316657	97316756	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:95582133;1allele=C/T;version=Hapmap2;RS=rs1061469968;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	97336197	97336296	.	+	.	Name=Height_above_ear;B73v2_pos=8:95602249;1allele=T/C;version=Hapmap2;RS=rs811295306;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	97363820	97363919	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:95630411;1allele=G/A;version=Hapmap2;RS=rs130819011;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	97388626	97388725	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:95655216;1allele=G/A;version=Hapmap2;RS=rs825513271;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	97389552	97389651	.	+	.	Name=Leaf_width;B73v2_pos=8:95656142;1allele=G/A;version=Hapmap2;RS=rs820958897;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	97396202	97396301	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:95662792;1allele=T/C;version=Hapmap2;RS=rs806149885;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	97448219	97448318	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:95714809;1allele=A/G;version=Hapmap2;RS=rs278534151;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	97459859	97459958	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:95726446;1allele=C/G;version=Hapmap2;RS=rs832187996;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	97476626	97476725	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:95743213;1allele=G/C;version=Hapmap2;RS=rs822505614;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	97509817	97509916	.	+	.	Name=Ear_height;B73v2_pos=8:95776404;1allele=C/T;version=Hapmap2;RS=rs724698213;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	97560763	97560862	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:95826500;1allele=T/G;version=Hapmap2;RS=rs820593678;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	97565041	97565140	.	+	.	Name=Days_to_silk;B73v2_pos=8:95830778;1allele=G/A;version=Hapmap2;RS=rs803875981;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	97689841	97689940	.	+	.	Name=Ear_height;B73v2_pos=8:95956051;1allele=G/A;version=Hapmap2;RS=rs828256936;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	97691398	97691497	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:95957608;1allele=C/T;version=Hapmap2;RS=rs130819601;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	97975012	97975111	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:96252566;1allele=G/C;version=Hapmap1;RS=rs131686911;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	97975012	97975111	.	+	.	Name=Days_to_silk;B73v2_pos=8:96252566;1allele=C/G;version=Hapmap2;RS=rs131686911;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	98003524	98003623	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:96281004;1allele=A/G;version=Hapmap2;RS=rs845361504;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	98015399	98015498	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:96293120;1allele=G/A;version=Hapmap1;RS=rs131686992;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	98437647	98437746	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:96702037;1allele=A/T;version=Hapmap2;RS=rs1064298912;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	98449370	98449469	.	+	.	Name=Days_to_silk;B73v2_pos=8:96713760;1allele=G/A;version=Hapmap2;RS=rs130820631;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	98454342	98454441	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:96718732;1allele=G/A;version=Hapmap2;RS=rs847186218;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	98471840	98471939	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:96736232;1allele=C/T;version=Hapmap2;RS=rs1064755812;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	98480798	98480897	.	+	.	Name=Height_above_ear;B73v2_pos=8:96744771;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	98488642	98488741	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:96752615;1allele=T/C;version=Hapmap1;RS=rs131687155;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	98489435	98489534	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:96753408;1allele=G/A;version=Hapmap2;RS=rs130820665;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	98523959	98524058	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:96789251;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	98772971	98773070	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:97028659;1allele=T/C;version=Hapmap2;RS=rs130820952;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	98892499	98892598	.	+	.	Name=Ear_height;B73v2_pos=8:97154881;1allele=C/T;version=Hapmap2;RS=rs810712620;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	99240193	99240292	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:97404702;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	100357806	100357905	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:98485330;1allele=C/T;version=Hapmap2;RS=rs804400052;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	100712864	100712963	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:98830214;1allele=T/G;version=Hapmap2;RS=rs848054189;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	100721510	100721609	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:98838860;1allele=C/T;version=Hapmap2;RS=rs847430703;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	100957793	100957892	.	+	.	Name=Leaf_width;B73v2_pos=8:99070965;1allele=A/G;version=Hapmap2;RS=rs816146031;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	100981925	100982024	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:99096450;1allele=C/T;version=Hapmap2;RS=rs829826602;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	101019567	101019666	.	+	.	Name=Leaf_width;B73v2_pos=8:99133806;1allele=A/G;version=Hapmap2;RS=rs823737442;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	101064240	101064339	.	+	.	Name=Ear_height;B73v2_pos=8:99176306;1allele=A/G;version=Hapmap2;RS=rs801676129;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	101067246	101067345	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:99179313;1allele=T/G;version=Hapmap2;RS=rs278536434;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	101075262	101075361	.	+	.	Name=Ear_height;B73v2_pos=8:99187331;1allele=A/G;version=Hapmap2;RS=rs1063941116;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	101115955	101116054	.	+	.	Name=Ear_height;B73v2_pos=8:99230010;1allele=C/A;version=Hapmap1;RS=rs131687962;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	101213869	101213968	.	+	.	Name=Leaf_width;B73v2_pos=8:99338944;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	101373873	101373972	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:99476774;1allele=C/T;version=Hapmap2;RS=rs1063535934;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	101500311	101500410	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:99638373;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	101617544	101617643	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:99713247;1allele=C/T;version=Hapmap2;RS=rs804627653;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	101617544	101617643	.	+	.	Name=Height_above_ear;B73v2_pos=8:99713247;1allele=C/T;version=Hapmap2;RS=rs804627653;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	101617544	101617643	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:99713247;1allele=C/T;version=Hapmap2;RS=rs804627653;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	101637709	101637808	.	+	.	Name=Height_above_ear;B73v2_pos=8:99733412;1allele=G/C;version=Hapmap2;RS=rs839641586;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	101637709	101637808	.	+	.	Name=Leaf_length;B73v2_pos=8:99733412;1allele=G/C;version=Hapmap2;RS=rs839641586;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	101814598	101814697	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:99904212;1allele=G/T;version=Hapmap2;RS=rs841754291;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	101873724	101873823	.	+	.	Name=Ear_height;B73v2_pos=8:99956551;1allele=G/A;version=Hapmap2;RS=rs130824410;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	101990395	101990494	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:100085166;1allele=C/T;version=Hapmap2;RS=rs278537426;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	102271824	102271923	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:100340116;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	102566634	102566733	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:100624348;1allele=A/T;version=Hapmap2;RS=rs726683280;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	102606311	102606410	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:100664029;1allele=G/T;version=Hapmap2;RS=rs838282989;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	102657978	102658077	.	+	.	Name=Height_above_ear;B73v2_pos=8:100714735;1allele=C/A;version=Hapmap2;RS=rs842101025;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	102714269	102714368	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:100771268;1allele=G/A;version=Hapmap2;RS=rs847577195;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	102714273	102714372	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:100771272;1allele=G/A;version=Hapmap2;RS=rs810570025;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	102767450	102767549	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:100826390;1allele=A/G;version=Hapmap2;RS=rs804231724;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	102839180	102839279	.	+	.	Name=Ear_height;B73v2_pos=8:100884556;1allele=C/T;version=Hapmap2;RS=rs130825614;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	102906479	102906578	.	+	.	Name=Height_above_ear;B73v2_pos=8:100952331;1allele=C/T;version=Hapmap2;RS=rs817494699;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	103143181	103143280	.	+	.	Name=Ear_height;B73v2_pos=8:101176344;1allele=C/G;version=Hapmap2;RS=rs130825987;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	103144973	103145072	.	+	.	Name=Plant_height;B73v2_pos=8:101178136;1allele=G/A;version=Hapmap2;RS=rs813831929;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	103144973	103145072	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:101178136;1allele=G/A;version=Hapmap2;RS=rs813831929;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	103164181	103164280	.	+	.	Name=Leaf_width;B73v2_pos=6:14122690;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	103168928	103169027	.	+	.	Name=Ear_height;B73v2_pos=8:101200686;1allele=G/A;version=Hapmap2;RS=rs130826027;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	103178579	103178678	.	+	.	Name=Leaf_width;B73v2_pos=8:101210332;1allele=G/C;version=Hapmap2;RS=rs130826031;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	103209702	103209801	.	+	.	Name=Ear_height;B73v2_pos=8:101241457;1allele=C/G;version=Hapmap2;RS=rs827709124;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	103210329	103210428	.	+	.	Name=Days_to_anthesis;B73v2_pos=7:15750609;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	103236434	103236533	.	+	.	Name=Ear_height;B73v2_pos=8:101268198;1allele=C/T;version=Hapmap2;RS=rs832760000;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	103238168	103238267	.	+	.	Name=Ear_height;B73v2_pos=8:101269932;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	103379315	103379414	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:101408877;1allele=T/A;version=Hapmap2;RS=rs839687377;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	103379316	103379415	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:101408878;1allele=T/C;version=Hapmap2;RS=rs820733101;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	103402312	103402411	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:101512794;1allele=T/C;version=Hapmap2;RS=rs843847745;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	103808610	103808709	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:101771630;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	103809153	103809252	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:101771087;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	103827023	103827122	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:101753198;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	103892080	103892179	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:101927932;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	103908504	103908603	.	+	.	Name=Leaf_width;B73v2_pos=8:101977423;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	104004005	104004104	.	+	.	Name=Malate;B73v2_pos=8:102027886;1allele=T/C;version=Hapmap2;RS=rs829564092;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	104030241	104030340	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:102054124;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	104071707	104071806	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:102095548;1allele=T/C;version=Hapmap2;RS=rs850243027;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	104081113	104081212	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:102104957;1allele=G/A;version=Hapmap2;RS=rs849001257;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	104086085	104086184	.	+	.	Name=Ear_height;B73v2_pos=8:102109929;1allele=C/T;version=Hapmap2;RS=rs829274919;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	104142369	104142468	.	+	.	Name=Ear_height;B73v2_pos=8:102164640;1allele=G/C;version=Hapmap1;RS=rs132453893;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	104143159	104143258	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:102165430;1allele=G/A;version=Hapmap1;RS=rs132453911;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	104143161	104143260	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:102165432;1allele=A/G;version=Hapmap1;RS=rs132453913;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	104143469	104143568	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:102165740;1allele=T/G;version=Hapmap2;RS=rs130826977;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	104168195	104168294	.	+	.	Name=Leaf_length;B73v2_pos=8:102190470;1allele=T/C;version=Hapmap2;RS=rs804786748;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	104271423	104271522	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:102261706;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	104358505	104358604	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:102362397;1allele=T/C;version=Hapmap2;RS=rs278539540;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	104358505	104358604	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:102362397;1allele=T/C;version=Hapmap2;RS=rs278539540;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	104484085	104484184	.	+	.	Name=Total_amino_acids;B73v2_pos=8:102488625;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	104971161	104971260	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:102864132;1allele=C/T;version=Hapmap2;RS=rs726053757;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	104973014	104973113	.	+	.	Name=Ear_height;B73v2_pos=8:102865986;1allele=G/T;version=Hapmap2;RS=rs812627954;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	104996851	104996950	.	+	.	Name=Height_above_ear;B73v2_pos=8:102898321;1allele=C/T;version=Hapmap2;RS=rs807812114;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	105021994	105022093	.	+	.	Name=Ear_height;B73v2_pos=8:102990083;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	105024706	105024805	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:102987371;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	105156278	105156377	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:103056591;1allele=G/A;version=Hapmap2;RS=rs831165008;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	105160531	105160630	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:103060844;1allele=C/T;version=Hapmap2;RS=rs821823578;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	105221208	105221307	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:103122212;1allele=A/G;version=Hapmap2;RS=rs820976263;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	105221355	105221454	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:103122359;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	105224866	105224965	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:103125870;1allele=G/A;version=Hapmap2;RS=rs278540488;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	105294143	105294242	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:103196224;1allele=C/T;version=Hapmap2;RS=rs130828403;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	105294393	105294492	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:103196474;1allele=A/G;version=Hapmap2;RS=rs835954566;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	105294513	105294612	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:103196594;1allele=G/A;version=Hapmap2;RS=rs130828406;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	105350349	105350448	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:103251740;1allele=A/G;version=Hapmap2;RS=rs278540560;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	105350349	105350448	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:103251740;1allele=A/G;version=Hapmap2;RS=rs278540560;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	105352429	105352528	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:103253820;1allele=C/G;version=Hapmap2;RS=rs132454510;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	105364894	105364993	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:103266285;1allele=G/A;version=Hapmap2;RS=rs132454526;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	105463371	105463470	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:103367574;1allele=C/G;version=Hapmap2;RS=rs849423852;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	105497084	105497183	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:103399453;1allele=C/T;version=Hapmap2;RS=rs807750407;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	105898892	105898991	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:103817286;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	105933766	105933865	.	+	.	Name=Leaf_length;B73v2_pos=8:103849222;1allele=C/T;version=Hapmap2;RS=rs829397195;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	106415064	106415163	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:104275002;1allele=A/C;version=Hapmap2;RS=rs849077619;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	106418067	106418166	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:104278005;1allele=A/G;version=Hapmap2;RS=rs726357778;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	106420137	106420236	.	+	.	Name=Glutamate;B73v2_pos=8:104280075;1allele=G/C;version=Hapmap2;RS=rs132455014;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	106443338	106443437	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:104303276;1allele=G/A;version=Hapmap2;RS=rs814787411;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	106474650	106474749	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:104334588;1allele=C/A;version=Hapmap2;RS=rs130829639;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	106478165	106478264	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:104338103;1allele=G/A;version=Hapmap2;RS=rs817580504;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	106561555	106561654	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:104380896;1allele=T/C;version=Hapmap2;RS=rs130829754;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	106723789	106723888	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:104561601;1allele=G/A;version=Hapmap2;RS=rs828971062;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	106772680	106772779	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:104608911;1allele=A/G;version=Hapmap2;RS=rs812695567;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	106773945	106774044	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:104610176;1allele=A/G;version=Hapmap2;RS=rs811652832;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	106778097	106778196	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:104614328;1allele=C/G;version=Hapmap2;RS=rs816492264;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	106779472	106779571	.	+	.	Name=Total_amino_acids;B73v2_pos=8:104615703;1allele=G/A;version=Hapmap1;RS=rs130830003;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	106780566	106780665	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:104616797;1allele=C/G;version=Hapmap2;RS=rs130830011;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	106780728	106780827	.	+	.	Name=Total_amino_acids;B73v2_pos=8:104616959;1allele=G/A;version=Hapmap2;RS=rs132455157;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	106819998	106820097	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:104660765;1allele=C/T;version=Hapmap2;RS=rs130830121;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	106824196	106824295	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:104664963;1allele=A/C;version=Hapmap2;RS=rs278541529;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	106844896	106844995	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:104685552;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	106860067	106860166	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:104700725;1allele=T/C;version=Hapmap2;RS=rs838405786;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	106860074	106860173	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:104700732;1allele=T/C;version=Hapmap2;RS=rs840460701;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	106911516	106911615	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:104772019;1allele=C/T;version=Hapmap2;RS=rs278541641;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	107042533	107042632	.	+	.	Name=Leaf_length;B73v2_pos=8:104819385;1allele=G/A;version=Hapmap2;RS=rs726540549;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	107044310	107044409	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:104821157;1allele=C/G;version=Hapmap2;RS=rs278541710;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	107045701	107045800	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:104822548;1allele=A/C;version=Hapmap1;RS=rs132455345;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	107122297	107122396	.	+	.	Name=Height_above_ear;B73v2_pos=8:104955278;1allele=G/A;version=Hapmap2;RS=rs828768527;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	107288196	107288295	.	+	.	Name=100_Kernel_weight;B73v2_pos=5:208212987;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	107355167	107355266	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:105188295;1allele=G/C;version=Hapmap2;RS=rs278542127;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	107411744	107411843	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:105233352;1allele=A/C;version=Hapmap2;RS=rs278542261;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	107492855	107492954	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:105335177;1allele=A/G;version=Hapmap2;RS=rs130831346;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	107637178	107637277	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:105478607;1allele=T/A;version=Hapmap2;RS=rs130831649;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	107704955	107705054	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:105530679;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	107830272	107830358	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:105654833;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	107884685	107884784	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:105747329;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	107893942	107894041	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:105738069;1allele=G/A;version=Hapmap2;RS=rs822941339;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	107897289	107897388	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:105734722;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	107999688	107999787	.	+	.	Name=Days_to_silk;B73v2_pos=8:105827588;1allele=C/T;version=Hapmap2;RS=rs816311064;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	108022882	108022981	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:105849863;1allele=G/A;version=Hapmap2;RS=rs813423865;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	108061831	108061930	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:105899098;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108069867	108069966	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:105891062;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108070036	108070135	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:105890893;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108073439	108073538	.	+	.	Name=Glutamate;B73v2_pos=8:105887490;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108085464	108085563	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:105875465;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108219110	108219209	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:106025883;1allele=C/A;version=Hapmap2;RS=rs726396218;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	108258288	108258387	.	+	.	Name=Leaf_length;B73v2_pos=8:106093308;1allele=G/T;version=Hapmap2;RS=rs130832922;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	108427942	108428041	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:106237120;1allele=A/T;version=Hapmap1;RS=rs840169984;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	108459946	108460045	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:106269122;1allele=G/T;version=Hapmap2;RS=rs278543299;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	108601232	108601331	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:106423270;1allele=A/G;version=Hapmap2;RS=rs1061781142;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	108740995	108741094	.	+	.	Name=Height_above_ear;B73v2_pos=8:106547539;1allele=G/A;version=Hapmap2;RS=rs819254738;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	108757106	108757205	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:106565582;1allele=T/C;version=Hapmap2;RS=rs130833725;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	108761438	108761537	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:106569915;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108841793	108841892	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:106678869;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108867337	108867436	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:106653322;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	108876020	108876119	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:106686689;1allele=G/A;version=Hapmap2;RS=rs814708127;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	109001162	109001261	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:106810293;1allele=T/G;version=Hapmap2;RS=rs278543876;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	109018056	109018155	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:106827187;1allele=C/T;version=Hapmap2;RS=rs823189179;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	109034453	109034552	.	+	.	Name=Glutamate;B73v2_pos=8:106843584;1allele=A/G;version=Hapmap2;RS=rs130834317;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	109037511	109037610	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:106846642;1allele=T/C;version=Hapmap2;RS=rs817690584;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	109037806	109037905	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:106846937;1allele=G/A;version=Hapmap2;RS=rs819551758;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	109047606	109047705	.	+	.	Name=Leaf_length;B73v2_pos=8:106856737;1allele=T/C;version=Hapmap2;RS=rs727159351;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	109322306	109322405	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:107012386;1allele=TT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	109346085	109346184	.	+	.	Name=Tassel_length;B73v2_pos=8:107036351;1allele=G/T;version=Hapmap2;RS=rs815320399;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	109376929	109377028	.	+	.	Name=Height_above_ear;B73v2_pos=8:107067118;1allele=T/A;version=Hapmap2;RS=rs808851107;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	109391768	109391867	.	+	.	Name=Height_above_ear;B73v2_pos=8:107081957;1allele=C/T;version=Hapmap2;RS=rs804728633;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	109445328	109445427	.	+	.	Name=Height_above_ear;B73v2_pos=8:107135279;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	109474890	109474989	.	+	.	Name=Height_above_ear;B73v2_pos=8:107169536;1allele=G/A;version=Hapmap2;RS=rs130835235;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	109541498	109541597	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:107230224;1allele=G/A;version=Hapmap2;RS=rs821679621;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	109575665	109575764	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:107264398;1allele=A/G;version=Hapmap2;RS=rs130835593;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	109644136	109644235	.	+	.	Name=Leaf_length;B73v2_pos=8:107340330;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	109676863	109676962	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:107416290;1allele=A/G;version=Hapmap2;RS=rs825315932;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	109679288	109679387	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:107359398;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	109707591	109707690	.	+	.	Name=Height_above_ear;B73v2_pos=8:107387875;1allele=A/G;version=Hapmap2;RS=rs132456513;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	109765334	109765433	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:107450817;1allele=C/T;version=Hapmap2;RS=rs825166278;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	109803615	109803714	.	+	.	Name=Leaf_length;B73v2_pos=8:107489760;1allele=A/C;version=Hapmap2;RS=rs806684164;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	109804769	109804868	.	+	.	Name=Leaf_length;B73v2_pos=8:107490914;1allele=A/G;version=Hapmap2;RS=rs130836004;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	109855914	109856013	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:107581681;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	110104764	110104863	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:107790246;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	110113528	110113627	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:107799022;1allele=G/A;version=Hapmap2;RS=rs807988245;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	110142419	110142518	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:107829033;1allele=T/G;version=Hapmap2;RS=rs845736812;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	110295071	110295170	.	+	.	Name=Leaf_length;B73v2_pos=8:107950112;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	110306573	110306672	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:107998298;1allele=G/A;version=Hapmap2;RS=rs833625390;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	110427049	110427148	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:108122055;1allele=C/T;version=Hapmap2;RS=rs827524186;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	110482403	110482502	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:108169708;1allele=A/C;version=Hapmap2;RS=rs130837294;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	110487014	110487113	.	+	.	Name=Height_above_ear;B73v2_pos=8:108174319;1allele=T/C;version=Hapmap2;RS=rs816677817;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	110617421	110617520	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:108306905;1allele=C/T;version=Hapmap2;RS=rs130837443;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	110651826	110651925	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:108341045;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	110795754	110795853	.	+	.	Name=Leaf_length;B73v2_pos=8:108485307;1allele=A/G;version=Hapmap2;RS=rs1063628694;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	110808623	110808722	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:108498176;1allele=A/G;version=Hapmap2;RS=rs278545612;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	111264568	111264667	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=4:182049901;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	111283225	111283324	.	+	.	Name=Total_amino_acids;B73v2_pos=8:108965342;1allele=G/A;version=Hapmap2;RS=rs1061444506;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	111667607	111667706	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:109331864;1allele=T/C;version=Hapmap2;RS=rs827974993;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	111698404	111698503	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:109358698;1allele=T/C;version=Hapmap2;RS=rs823473441;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	111716438	111716537	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:109376749;1allele=G/A;version=Hapmap2;RS=rs132457252;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	111731020	111731119	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:109392134;1allele=A/G;version=Hapmap2;RS=rs724895979;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	111731675	111731774	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:109392789;1allele=C/T;version=Hapmap2;RS=rs831362214;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	112107973	112108072	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:109593276;1allele=T/C;version=Hapmap2;RS=rs817303127;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112108898	112108997	.	+	.	Name=Plant_height;B73v2_pos=8:109594201;1allele=G/A;version=Hapmap2;RS=rs812273052;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	112266900	112266999	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:109728348;1allele=G/C;version=Hapmap2;RS=rs725531003;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	112341301	112341400	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:109871131;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	112361624	112361723	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:109833804;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	112419080	112419179	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:109897513;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	112421948	112422047	.	+	.	Name=Height_above_ear;B73v2_pos=8:109900381;1allele=G/A;version=Hapmap2;RS=rs826461944;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	112427623	112427722	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:109906056;1allele=C/T;version=Hapmap2;RS=rs837365662;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	112429676	112429775	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:109908109;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	112433466	112433565	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:109911899;1allele=A/T;version=Hapmap2;RS=rs840636646;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	112433492	112433591	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:109911925;1allele=G/A;version=Hapmap2;RS=rs1063595519;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	112454220	112454319	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:109932656;1allele=A/G;version=Hapmap2;RS=rs1062757028;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	112476392	112476491	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:109954829;1allele=A/G;version=Hapmap2;RS=rs816310445;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	112477759	112477858	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:109956196;1allele=C/A;version=Hapmap2;RS=rs820982245;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	112489256	112489355	.	+	.	Name=Leaf_length;B73v2_pos=8:109967702;1allele=C/T;version=Hapmap2;RS=rs801522937;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	112614108	112614207	.	+	.	Name=Plant_height;B73v2_pos=8:110090537;1allele=T/A;version=Hapmap2;RS=rs835857209;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	112630016	112630115	.	+	.	Name=Glutamate;B73v2_pos=8:110117209;1allele=A/G;version=Hapmap2;RS=rs831620081;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	112706511	112706610	.	+	.	Name=Glutamate;B73v2_pos=8:110182407;1allele=C/G;version=Hapmap1;RS=rs132457679;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	112731306	112731405	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:110210019;1allele=C/T;version=Hapmap2;RS=rs1061691281;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112732245	112732344	.	+	.	Name=Total_amino_acids;B73v2_pos=8:110210958;1allele=G/A;version=Hapmap2;RS=rs813680566;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	112732991	112733090	.	+	.	Name=Total_amino_acids;B73v2_pos=8:110211704;1allele=A/C;version=Hapmap2;RS=rs278546984;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	112733347	112733446	.	+	.	Name=Glutamate;B73v2_pos=8:110212060;1allele=T/G;version=Hapmap2;RS=rs821729842;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	112737747	112737846	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:110216460;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	112737748	112737847	.	+	.	Name=Total_amino_acids;B73v2_pos=8:110216461;1allele=T/G;version=Hapmap1;RS=rs132457768;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	112767065	112767164	.	+	.	Name=Leaf_length;B73v2_pos=8:110245779;1allele=T/A;version=Hapmap2;RS=rs824604836;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	112767494	112767593	.	+	.	Name=Tassel_length;B73v2_pos=8:110246207;1allele=A/G;version=Hapmap2;RS=rs130839467;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	112767761	112767860	.	+	.	Name=Leaf_length;B73v2_pos=8:110246474;1allele=T/C;version=Hapmap2;RS=rs842555948;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112768339	112768438	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:110247052;1allele=C/A;version=Hapmap2;RS=rs849825432;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	112769700	112769799	.	+	.	Name=Plant_height;B73v2_pos=8:110249623;1allele=T/C;version=Hapmap2;RS=rs278547055;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112770991	112771090	.	+	.	Name=Cob_diameter;B73v2_pos=8:110250914;1allele=A/T;version=Hapmap2;RS=rs833605062;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	112771119	112771218	.	+	.	Name=Plant_height;B73v2_pos=8:110251042;1allele=G/A;version=Hapmap2;RS=rs842593546;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	112772695	112772794	.	+	.	Name=Tassel_length;B73v2_pos=8:110252618;1allele=C/T;version=Hapmap2;RS=rs834492989;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112807058	112807157	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:110288503;1allele=G/A;version=Hapmap2;RS=rs726773919;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	112807513	112807612	.	+	.	Name=Tassel_length;B73v2_pos=8:110288958;1allele=T/C;version=Hapmap2;RS=rs278547068;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112809224	112809323	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:110290670;1allele=C/T;version=Hapmap2;RS=rs840114281;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	112809473	112809572	.	+	.	Name=Tassel_length;B73v2_pos=8:110290919;1allele=A/G;version=Hapmap2;RS=rs808843757;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	112809507	112809606	.	+	.	Name=Tassel_length;B73v2_pos=8:110290953;1allele=T/C;version=Hapmap2;RS=rs813121282;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112868341	112868440	.	+	.	Name=Tassel_length;B73v2_pos=8:110341550;1allele=C/A;version=Hapmap1;RS=rs833868727;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	112870371	112870470	.	+	.	Name=Tassel_length;B73v2_pos=8:110343580;1allele=C/G;version=Hapmap2;RS=rs726580225;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	112911510	112911609	.	+	.	Name=Height_above_ear;B73v2_pos=8:110373238;1allele=C/T;version=Hapmap1;RS=rs132457831;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	112917598	112917697	.	+	.	Name=Leaf_length;B73v2_pos=8:110379326;1allele=T/C;version=Hapmap2;RS=rs807859732;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	112936650	112936749	.	+	.	Name=Plant_height;B73v2_pos=8:110398377;1allele=G/A;version=Hapmap1;RS=rs132457861;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	113017927	113018026	.	+	.	Name=Leaf_length;B73v2_pos=8:110478595;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113018835	113018934	.	+	.	Name=Tassel_length;B73v2_pos=8:110477687;1allele=T/G;version=Hapmap2;RS=rs811925141;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	113019883	113019982	.	+	.	Name=Tassel_length;B73v2_pos=8:110476639;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113020165	113020264	.	+	.	Name=Tassel_length;B73v2_pos=8:110476357;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113021439	113021538	.	+	.	Name=Plant_height;B73v2_pos=8:110475083;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113021619	113021718	.	+	.	Name=Days_to_silk;B73v2_pos=8:110474903;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113021619	113021718	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:110474903;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113021723	113021822	.	+	.	Name=Height_above_ear;B73v2_pos=8:110474799;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113029831	113029930	.	+	.	Name=Tassel_length;B73v2_pos=8:110585309;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113030888	113030987	.	+	.	Name=Tassel_length;B73v2_pos=8:110584252;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113031467	113031566	.	+	.	Name=Height_above_ear;B73v2_pos=8:110583673;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113031554	113031653	.	+	.	Name=Tassel_length;B73v2_pos=8:110583586;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113063305	113063404	.	+	.	Name=Tassel_length;B73v2_pos=8:110524398;1allele=G/A;version=Hapmap2;RS=rs833289210;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	113063653	113063752	.	+	.	Name=Plant_height;B73v2_pos=8:110524746;1allele=A/C;version=Hapmap2;RS=rs130839616;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	113064110	113064209	.	+	.	Name=Tassel_length;B73v2_pos=8:110525203;1allele=C/T;version=Hapmap2;RS=rs830189142;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	113065237	113065336	.	+	.	Name=Height_above_ear;B73v2_pos=8:110526333;1allele=C/G;version=Hapmap2;RS=rs835502353;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	113065237	113065336	.	+	.	Name=Tassel_length;B73v2_pos=8:110526333;1allele=C/G;version=Hapmap2;RS=rs835502353;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	113123730	113123829	.	+	.	Name=Tassel_length;B73v2_pos=8:110596224;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113136973	113137072	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:110609513;1allele=C/T;version=Hapmap2;RS=rs130839679;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	113336535	113336634	.	+	.	Name=Leaf_width;B73v2_pos=8:110802603;1allele=T/C;version=Hapmap2;RS=rs809245536;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	113562956	113563055	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:111021661;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113568936	113569035	.	+	.	Name=Height_above_ear;B73v2_pos=8:111015679;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113570865	113570964	.	+	.	Name=Leaf_length;B73v2_pos=8:111013750;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113571433	113571532	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:111013182;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113628742	113628841	.	+	.	Name=Height_above_ear;B73v2_pos=8:111120094;1allele=A/C;version=Hapmap2;RS=rs841413968;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	113628742	113628841	.	+	.	Name=Leaf_length;B73v2_pos=8:111120094;1allele=A/C;version=Hapmap2;RS=rs841413968;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	113648956	113649055	.	+	.	Name=Leaf_length;B73v2_pos=8:111101120;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113650392	113650491	.	+	.	Name=Tassel_length;B73v2_pos=8:111099683;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113656074	113656173	.	+	.	Name=Tassel_length;B73v2_pos=8:111093936;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113664870	113664969	.	+	.	Name=Leaf_length;B73v2_pos=8:111111196;1allele=A/C;version=Hapmap2;RS=rs132458274;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	113725900	113725999	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:111192862;1allele=C/G;version=Hapmap1;RS=rs132458340;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	113726563	113726662	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:111193517;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113729376	113729475	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:111196328;1allele=G/C;version=Hapmap1;RS=rs132458365;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	113909981	113910080	.	+	.	Name=Days_to_silk;B73v2_pos=8:111370729;1allele=C/T;version=Hapmap2;RS=rs826021753;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	113931558	113931657	.	+	.	Name=Cob_diameter;B73v2_pos=8:111392305;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	113966478	113966577	.	+	.	Name=Ear_height;B73v2_pos=8:111423343;1allele=C/T;version=Hapmap2;RS=rs828969833;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	113977434	113977533	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=2:228711162;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	114030837	114030936	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=3:166887540;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	114087585	114087684	.	+	.	Name=Sucrose;B73v2_pos=7:116338212;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	114171467	114171566	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:111626223;1allele=G/A;version=Hapmap2;RS=rs130840868;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	114313195	114313294	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:111765720;1allele=A/G;version=Hapmap2;RS=rs818339365;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	114332418	114332517	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:111784945;1allele=A/C;version=Hapmap2;RS=rs804664283;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	114333634	114333733	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:111786161;1allele=T/C;version=Hapmap2;RS=rs830744700;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	114374059	114374158	.	+	.	Name=Total_amino_acids;B73v2_pos=8:111826588;1allele=G/A;version=Hapmap2;RS=rs829164586;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	114380690	114380789	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:111833870;1allele=A/G;version=Hapmap2;RS=rs824932742;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	114381385	114381484	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:111834565;1allele=T/C;version=Hapmap2;RS=rs845019044;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	114381404	114381503	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:111834584;1allele=G/A;version=Hapmap2;RS=rs824072422;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	114422784	114422883	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:111875972;1allele=C/T;version=Hapmap2;RS=rs817418996;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	114426195	114426294	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:111879383;1allele=C/T;version=Hapmap2;RS=rs812354556;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	114547544	114547643	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:111996140;1allele=T/C;version=Hapmap2;RS=rs844311907;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	114548393	114548492	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:111996989;1allele=A/C;version=Hapmap2;RS=rs850267257;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	114654392	114654491	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:112104924;1allele=A/G;version=Hapmap2;RS=rs832022353;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	114917708	114917807	.	+	.	Name=Days_to_silk;B73v2_pos=8:112372681;1allele=T/C;version=Hapmap2;RS=rs849759306;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	114934532	114934631	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:112389506;1allele=G/C;version=Hapmap2;RS=rs132458834;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	115054062	115054161	.	+	.	Name=Days_to_silk;B73v2_pos=8:112510750;1allele=T/C;version=Hapmap2;RS=rs804154756;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	115075945	115076044	.	+	.	Name=Glutamate;B73v2_pos=8:112532584;1allele=A/-;version=Hapmap1;RS=rs132458877;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	115111135	115111234	.	+	.	Name=Days_to_silk;B73v2_pos=8:112567774;1allele=A/C;version=Hapmap2;RS=rs815473687;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	115262768	115262867	.	+	.	Name=Tassel_length;B73v2_pos=8:112708981;1allele=T/C;version=Hapmap2;RS=rs278549054;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	115270380	115270479	.	+	.	Name=Days_to_silk;B73v2_pos=8:112716593;1allele=C/T;version=Hapmap2;RS=rs839159060;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	115308762	115308861	.	+	.	Name=Leaf_length;B73v2_pos=8:112785216;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	115352876	115352975	.	+	.	Name=Total_amino_acids;B73v2_pos=8:112741156;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	115354393	115354492	.	+	.	Name=Total_amino_acids;B73v2_pos=8:112739639;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	115501741	115501840	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:112952957;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	115501741	115501840	.	+	.	Name=Height_above_ear;B73v2_pos=8:112952957;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	115530272	115530371	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:112978591;1allele=G/C;version=Hapmap2;RS=rs132459130;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	115558744	115558843	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:113007214;1allele=T/C;version=Hapmap2;RS=rs835930142;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	115560386	115560485	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:113008856;1allele=/GCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	115756255	115756354	.	+	.	Name=Ear_height;B73v2_pos=8:113184579;1allele=C/T;version=Hapmap2;RS=rs831375287;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	115763910	115764008	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:113192237;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	115815104	115815203	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:113231262;1allele=T/C;version=Hapmap1;RS=rs130843509;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	115904240	115904339	.	+	.	Name=Height_above_ear;B73v2_pos=8:113347031;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	116092794	116092893	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:113493952;1allele=T/C;version=Hapmap2;RS=rs825527249;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	116123639	116123738	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:113553083;1allele=A/G;version=Hapmap2;RS=rs812956749;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	116184396	116184495	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:113603547;1allele=A/G;version=Hapmap2;RS=rs847229905;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	116298456	116298555	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:113705665;1allele=C/T;version=Hapmap2;RS=rs130844180;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	116322114	116322213	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:113741677;1allele=T/C;version=Hapmap2;RS=rs809113704;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	116387070	116387169	.	+	.	Name=Leaf_width;B73v2_pos=8:113794575;1allele=A/G;version=Hapmap2;RS=rs1061558228;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	116387807	116387906	.	+	.	Name=Leaf_width;B73v2_pos=8:113795312;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	116400138	116400237	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:113806177;1allele=A/T;version=Hapmap2;RS=rs847832759;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	116444667	116444766	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:113845781;1allele=A/G;version=Hapmap2;RS=rs278550207;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	116470334	116470433	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:113871448;1allele=G/C;version=Hapmap1;RS=rs132459754;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	116470335	116470434	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:113871449;1allele=C/T;version=Hapmap1;RS=rs132459755;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	116594106	116594205	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:113994847;1allele=G/T;version=Hapmap2;RS=rs813821428;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	116594106	116594205	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:113994847;1allele=G/T;version=Hapmap2;RS=rs813821428;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	116620200	116620299	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:114020942;1allele=A/G;version=Hapmap2;RS=rs807256346;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	116743526	116743625	.	+	.	Name=Plant_height;B73v2_pos=8:114145130;1allele=G/A;version=Hapmap2;RS=rs813847568;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	116780970	116781069	.	+	.	Name=Plant_height;B73v2_pos=8:114182888;1allele=G/A;version=Hapmap2;RS=rs817045856;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	116816817	116816916	.	+	.	Name=Plant_height;B73v2_pos=8:114218704;1allele=G/A;version=Hapmap2;RS=rs726686790;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	116817269	116817368	.	+	.	Name=Plant_height;B73v2_pos=8:114219156;1allele=A/G;version=Hapmap2;RS=rs724448048;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	116946306	116946405	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:114323484;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	116985702	116985801	.	+	.	Name=Plant_height;B73v2_pos=8:114420828;1allele=G/T;version=Hapmap2;RS=rs130845097;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	117035414	117035513	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:114469829;1allele=A/T;version=Hapmap2;RS=rs822634888;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	117038504	117038603	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:114472921;1allele=G/A;version=Hapmap2;RS=rs808513476;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	117038504	117038603	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:114472921;1allele=G/A;version=Hapmap2;RS=rs808513476;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	117041108	117041207	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:114475525;1allele=C/T;version=Hapmap2;RS=rs130845250;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	117089311	117089410	.	+	.	Name=Days_to_silk;B73v2_pos=8:114522429;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	117194158	117194257	.	+	.	Name=Leaf_width;B73v2_pos=8:114623124;1allele=G/A;version=Hapmap2;RS=rs820112335;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	117391360	117391459	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:114819917;1allele=T/C;version=Hapmap2;RS=rs823149795;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	117479261	117479360	.	+	.	Name=Leaf_width;B73v2_pos=8:114907823;1allele=C/T;version=Hapmap2;RS=rs819695580;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	117804185	117804284	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:115232821;1allele=T/C;version=Hapmap2;RS=rs130846776;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	117864573	117864672	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:115294513;1allele=A/G;version=Hapmap1;RS=rs130846957;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	117865841	117865940	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:115295781;1allele=A/G;version=Hapmap2;RS=rs825177612;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	117868227	117868326	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:115298167;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	117873752	117873851	.	+	.	Name=Ear_height;B73v2_pos=8:115303692;1allele=T/C;version=Hapmap2;RS=rs844250783;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	117878140	117878239	.	+	.	Name=Plant_height;B73v2_pos=8:115308080;1allele=T/C;version=Hapmap2;RS=rs830669835;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	118024471	118024570	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:115451261;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	118083262	118083361	.	+	.	Name=Days_to_silk;B73v2_pos=8:115510346;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	118219065	118219164	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:115640200;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	118297493	118297592	.	+	.	Name=Ear_height;B73v2_pos=8:115700664;1allele=A/T;version=Hapmap2;RS=rs821188822;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	118372400	118372499	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:115768891;1allele=A/T;version=Hapmap2;RS=rs810691301;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	118431310	118431409	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:115828715;1allele=C/A;version=Hapmap2;RS=rs844470743;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	118511160	118511259	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:115907549;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	118589247	118589346	.	+	.	Name=Leaf_width;B73v2_pos=8:115935419;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	118779386	118779485	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:116119968;1allele=T/G;version=Hapmap1;RS=rs132460790;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	118840454	118840553	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:116197566;1allele=G/A;version=Hapmap2;RS=rs278552459;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	118845883	118845982	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:116202995;1allele=A/T;version=Hapmap2;RS=rs1063037715;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	118902004	118902103	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:116255224;1allele=A/G;version=Hapmap2;RS=rs130847937;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	119118853	119118952	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:116481063;1allele=C/A;version=Hapmap2;RS=rs278552614;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	119339204	119339303	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:116750309;1allele=G/A;version=Hapmap2;RS=rs1060641960;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	119456511	119456610	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:116844434;1allele=A/T;version=Hapmap2;RS=rs825306180;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	119466968	119467067	.	+	.	Name=Ear_height;B73v2_pos=8:116854892;1allele=G/A;version=Hapmap2;RS=rs278552964;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	119482959	119483058	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:116870884;1allele=A/T;version=Hapmap2;RS=rs818275886;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	119512841	119512940	.	+	.	Name=Total_amino_acids;B73v2_pos=8:116883756;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	119533299	119533398	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:116965936;1allele=A/G;version=Hapmap2;RS=rs1062959392;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	119533299	119533398	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:116965936;1allele=A/G;version=Hapmap2;RS=rs1062959392;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	119553158	119553257	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:116982391;1allele=C/G;version=Hapmap2;RS=rs278553180;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	119766053	119766152	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:117073154;1allele=C/A;version=Hapmap2;RS=rs814524048;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	119831475	119831574	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=6:27656820;1allele=T/C;version=Hapmap2;RS=rs818746124;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	120033326	120033425	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:117383709;1allele=T/A;version=Hapmap2;RS=rs278553616;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	120039407	120039506	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:117389346;1allele=T/C;version=Hapmap2;RS=rs130849674;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	120067405	120067504	.	+	.	Name=Ear_height;B73v2_pos=8:117347404;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	120104236	120104335	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:117423905;1allele=T/C;version=Hapmap2;RS=rs820658117;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	120239809	120239908	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:117551655;1allele=T/C;version=Hapmap2;RS=rs819728240;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	120293408	120293507	.	+	.	Name=Tassel_length;B73v2_pos=8:117612411;1allele=G/A;version=Hapmap2;RS=rs726068193;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	120310587	120310686	.	+	.	Name=Plant_height;B73v2_pos=8:117629590;1allele=C/A;version=Hapmap2;RS=rs278554031;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	120449769	120449868	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:117762650;1allele=A/G;version=Hapmap2;RS=rs1060915171;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	120450577	120450676	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:117763458;1allele=A/G;version=Hapmap2;RS=rs830616170;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	120514951	120515050	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:117829523;1allele=C/T;version=Hapmap2;RS=rs843902468;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	120517962	120518061	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:117832534;1allele=G/T;version=Hapmap2;RS=rs849948189;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	120537883	120537982	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:117861514;1allele=G/A;version=Hapmap1;RS=rs132461685;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	120640274	120640373	.	+	.	Name=Height_above_ear;B73v2_pos=8:117955019;1allele=C/T;version=Hapmap2;RS=rs829039711;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	120671430	120671521	.	+	.	Name=Tassel_length;B73v2_pos=8:118010684;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	120671504	120671603	.	+	.	Name=Tassel_length;B73v2_pos=8:118010766;1allele=T/C;version=Hapmap2;RS=rs839060057;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	120686196	120686295	.	+	.	Name=Tassel_length;B73v2_pos=8:117986123;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	120799487	120799586	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:118103814;1allele=-/+;version=Hapmap2;RS=rs132462037;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	120937337	120937436	.	+	.	Name=Glucose;B73v2_pos=8:118224390;1allele=G/A;version=Hapmap2;RS=rs725814408;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	120940849	120940948	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:118227905;1allele=G/A;version=Hapmap2;RS=rs802346975;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	121004753	121004852	.	+	.	Name=Days_to_silk;B73v2_pos=8:118285567;1allele=C/T;version=Hapmap2;RS=rs278554743;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121040849	121040948	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:118322119;1allele=A/G;version=Hapmap1;RS=rs130851103;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	121049305	121049404	.	+	.	Name=Cob_diameter;B73v2_pos=8:118330579;1allele=C/T;version=Hapmap2;RS=rs1061162257;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	121053677	121053776	.	+	.	Name=Cob_diameter;B73v2_pos=8:118334951;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	121144126	121144225	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:118424881;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	121232402	121232501	.	+	.	Name=Total_amino_acids;B73v2_pos=8:118530916;1allele=T/C;version=Hapmap2;RS=rs828640635;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	121244750	121244849	.	+	.	Name=Days_to_silk;B73v2_pos=8:118652895;1allele=C/T;version=Hapmap2;RS=rs839637171;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121245351	121245450	.	+	.	Name=Days_to_silk;B73v2_pos=8:118653496;1allele=G/A;version=Hapmap2;RS=rs811668691;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	121262097	121262196	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:118670243;1allele=C/G;version=Hapmap2;RS=rs834868861;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	121263240	121263339	.	+	.	Name=Total_amino_acids;B73v2_pos=8:118671386;1allele=A/G;version=Hapmap1;RS=rs130851424;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	121263670	121263769	.	+	.	Name=Total_amino_acids;B73v2_pos=8:118671816;1allele=G/A;version=Hapmap2;RS=rs813340534;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	121264053	121264152	.	+	.	Name=Total_amino_acids;B73v2_pos=8:118672199;1allele=T/G;version=Hapmap2;RS=rs132462415;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	121264382	121264481	.	+	.	Name=Leaf_width;B73v2_pos=8:118672528;1allele=C/T;version=Hapmap2;RS=rs130851428;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121266105	121266204	.	+	.	Name=Days_to_silk;B73v2_pos=8:118674251;1allele=G/C;version=Hapmap1;RS=rs132462427;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	121273375	121273474	.	+	.	Name=Days_to_silk;B73v2_pos=8:118681521;1allele=A/G;version=Hapmap2;RS=rs801946857;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	121273375	121273474	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:118681521;1allele=A/G;version=Hapmap2;RS=rs801946857;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	121399911	121400010	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:118697748;1allele=C/T;version=Hapmap2;RS=rs805180237;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121425813	121425912	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:118731417;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	121464219	121464318	.	+	.	Name=Days_to_silk;B73v2_pos=8:118758507;1allele=G/C;version=Hapmap2;RS=rs817782921;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	121472632	121472731	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:118766921;1allele=A/G;version=Hapmap2;RS=rs832293754;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	121472777	121472876	.	+	.	Name=Days_to_silk;B73v2_pos=8:118767066;1allele=C/A;version=Hapmap2;RS=rs804055221;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	121482184	121482283	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:118776474;1allele=T/C;version=Hapmap2;RS=rs132462531;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	121492782	121492881	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:118787072;1allele=G/A;version=Hapmap2;RS=rs805338488;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	121506497	121506596	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:118800970;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	121562097	121562196	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:118856861;1allele=C/T;version=Hapmap2;RS=rs727207827;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121572692	121572791	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:118867458;1allele=G/A;version=Hapmap2;RS=rs132462627;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	121584960	121585059	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:118879726;1allele=G/A;version=Hapmap2;RS=rs278555249;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	121597376	121597475	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:118892142;1allele=T/C;version=Hapmap2;RS=rs808666263;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	121712039	121712138	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:118969184;1allele=+/-;version=Hapmap2;RS=rs815250665;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	121712182	121712281	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:118969327;1allele=G/C;version=Hapmap2;RS=rs832752834;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	121777859	121777958	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:119036629;1allele=T/C;version=Hapmap2;RS=rs132462777;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121778142	121778241	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:119036912;1allele=G/T;version=Hapmap1;RS=rs132462783;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	121778518	121778617	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119037288;1allele=T/C;version=Hapmap2;RS=rs832581070;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	121782622	121782721	.	+	.	Name=Total_amino_acids;B73v2_pos=8:119041392;1allele=A/G;version=Hapmap2;RS=rs130851814;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	121783075	121783174	.	+	.	Name=Total_amino_acids;B73v2_pos=8:119041845;1allele=T/C;version=Hapmap2;RS=rs130851817;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121876006	121876105	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119124270;1allele=C/T;version=Hapmap2;RS=rs278555514;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121906690	121906789	.	+	.	Name=Tassel_length;B73v2_pos=8:119154954;1allele=G/T;version=Hapmap2;RS=rs278555553;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	121908663	121908762	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119156927;1allele=C/T;version=Hapmap2;RS=rs811166032;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	121908987	121909086	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:119157251;1allele=G/A;version=Hapmap2;RS=rs849960592;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	121909365	121909464	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119157629;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	121986765	121986864	.	+	.	Name=Days_to_silk;B73v2_pos=8:119237098;1allele=T/G;version=Hapmap2;RS=rs132462968;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	121987284	121987383	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119237617;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	121988089	121988188	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119238421;1allele=A/C;version=Hapmap1;RS=rs132462997;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	121988484	121988583	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119238816;1allele=C/T;version=Hapmap2;RS=rs841824686;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	121988772	121988871	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:119239104;1allele=A/C;version=Hapmap2;RS=rs830290380;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	121989257	121989356	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119239589;1allele=T/A;version=Hapmap1;RS=rs130852232;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	122006016	122006115	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119256348;1allele=T/C;version=Hapmap2;RS=rs846660334;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122056101	122056200	.	+	.	Name=Protein;B73v2_pos=8:119306134;1allele=T/C;version=Hapmap2;RS=rs842337628;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122075856	122075955	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:119321968;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122087089	122087188	.	+	.	Name=Ear_height;B73v2_pos=8:119332207;1allele=C/T;version=Hapmap2;RS=rs811707596;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122351051	122351150	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:119606989;1allele=T/C;version=Hapmap2;RS=rs846008198;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122398801	122398900	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119644801;1allele=-/G;version=Hapmap1;RS=rs278555966;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	122399145	122399244	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119645145;1allele=C/T;version=Hapmap2;RS=rs132463312;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122399576	122399675	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119645576;1allele=C/T;version=Hapmap2;RS=rs130852498;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122504090	122504189	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119740656;1allele=C/T;version=Hapmap2;RS=rs278556013;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122504090	122504189	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:119740656;1allele=C/T;version=Hapmap2;RS=rs278556013;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122510347	122510446	.	+	.	Name=Plant_height;B73v2_pos=8:119746913;1allele=G/A;version=Hapmap2;RS=rs813909812;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	122510347	122510446	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:119746913;1allele=G/A;version=Hapmap2;RS=rs813909812;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	122592847	122592946	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:119832114;1allele=C/T;version=Hapmap2;RS=rs725247335;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122595667	122595766	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119834934;1allele=C/T;version=Hapmap2;RS=rs811203037;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122597039	122597138	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119836306;1allele=G/A;version=Hapmap2;RS=rs278556099;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	122597239	122597338	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119836506;1allele=G/T;version=Hapmap2;RS=rs278556100;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	122598404	122598503	.	+	.	Name=Height_above_ear;B73v2_pos=8:119837671;1allele=G/T;version=Hapmap2;RS=rs814296762;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	122600215	122600314	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:119839483;1allele=G/A;version=Hapmap2;RS=rs132463459;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	122608674	122608773	.	+	.	Name=Height_above_ear;B73v2_pos=8:119847942;1allele=A/G;version=Hapmap2;RS=rs130852745;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	122608785	122608884	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119848053;1allele=C/T;version=Hapmap2;RS=rs812939457;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122612234	122612333	.	+	.	Name=Plant_height;B73v2_pos=8:119851503;1allele=A/G;version=Hapmap2;RS=rs1060526260;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	122663431	122663530	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:119904727;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122666178	122666277	.	+	.	Name=Ear_height;B73v2_pos=8:119907474;1allele=C/T;version=Hapmap2;RS=rs278556177;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122666178	122666277	.	+	.	Name=Plant_height;B73v2_pos=8:119907474;1allele=C/T;version=Hapmap2;RS=rs278556177;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122666178	122666277	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:119907474;1allele=C/T;version=Hapmap2;RS=rs278556177;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122701612	122701711	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:119944403;1allele=G/A;version=Hapmap2;RS=rs835539707;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	122702097	122702196	.	+	.	Name=Plant_height;B73v2_pos=8:119944888;1allele=G/A;version=Hapmap2;RS=rs806115841;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	122702132	122702231	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:119944923;1allele=A/G;version=Hapmap2;RS=rs823046932;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	122703192	122703291	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:119945983;1allele=C/T;version=Hapmap2;RS=rs818632072;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122703408	122703507	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:119946199;1allele=T/C;version=Hapmap2;RS=rs836704209;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122703408	122703507	.	+	.	Name=Ear_height;B73v2_pos=8:119946199;1allele=T/C;version=Hapmap2;RS=rs836704209;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122703412	122703511	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:119946203;1allele=A/T;version=Hapmap2;RS=rs278556213;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	122703412	122703511	.	+	.	Name=Ear_height;B73v2_pos=8:119946203;1allele=A/T;version=Hapmap2;RS=rs278556213;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	122703412	122703511	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:119946203;1allele=A/T;version=Hapmap2;RS=rs278556213;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	122704358	122704457	.	+	.	Name=Ear_height;B73v2_pos=8:119947149;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122704443	122704542	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:119947234;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122704453	122704552	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:119947244;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122748669	122748768	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:119991374;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122806069	122806168	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:120045732;1allele=G/A;version=Hapmap2;RS=rs826737157;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	122810979	122811078	.	+	.	Name=Plant_height;B73v2_pos=8:120050642;1allele=C/T;version=Hapmap1;RS=rs826052922;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	122813119	122813218	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:120052782;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122823474	122823573	.	+	.	Name=Plant_height;B73v2_pos=8:120063138;1allele=A/G;version=Hapmap2;RS=rs132463714;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	122874965	122875064	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:120114223;1allele=T/C;version=Hapmap2;RS=rs812769264;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	122903538	122903637	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:120176064;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122931679	122931778	.	+	.	Name=Ear_height;B73v2_pos=8:120147982;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	122980830	122980929	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:120217943;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	123357157	123357256	.	+	.	Name=Height_above_ear;B73v2_pos=8:120606595;1allele=C/T;version=Hapmap2;RS=rs130854021;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	123357721	123357820	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:120607159;1allele=A/G;version=Hapmap2;RS=rs847011713;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	123358524	123358623	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:120607962;1allele=A/G;version=Hapmap2;RS=rs130854047;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	123358531	123358630	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:120607969;1allele=G/C;version=Hapmap2;RS=rs130854048;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	123360196	123360295	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:120609634;1allele=C/A;version=Hapmap2;RS=rs130854072;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	123366175	123366274	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:120615613;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	123369463	123369562	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:120618901;1allele=A/G;version=Hapmap2;RS=rs834141460;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	123369472	123369571	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:120618910;1allele=A/T;version=Hapmap2;RS=rs838012632;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	123369826	123369925	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:120619264;1allele=C/T;version=Hapmap2;RS=rs841148897;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	123417698	123417798	.	+	.	Name=Days_to_silk;B73v2_pos=8:120659007;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	123512745	123512844	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:120761287;1allele=G/A;version=Hapmap2;RS=rs132464050;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	123512882	123512981	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:120761424;1allele=/GGGCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	123796769	123796868	.	+	.	Name=Plant_height;B73v2_pos=8:121027099;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	123980815	123980914	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:121214065;1allele=C/T;version=Hapmap2;RS=rs130854539;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	124059761	124059860	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:121293011;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124308447	124308546	.	+	.	Name=Ear_height;B73v2_pos=8:121436057;1allele=G/C;version=Hapmap2;RS=rs846146159;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	124362737	124362836	.	+	.	Name=Days_to_silk;B73v2_pos=8:121490491;1allele=G/A;version=Hapmap2;RS=rs816574292;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	124424051	124424150	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:121563554;1allele=T/C;version=Hapmap2;RS=rs839570276;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	124510106	124510205	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:121632191;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124587564	124587663	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:121707530;1allele=A/G;version=Hapmap2;RS=rs808935409;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	124589191	124589290	.	+	.	Name=Plant_height;B73v2_pos=8:121709157;1allele=/TTCTCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124659916	124660015	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121780751;1allele=C/T;version=Hapmap2;RS=rs808053874;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	124659916	124660015	.	+	.	Name=Days_to_silk;B73v2_pos=8:121780751;1allele=C/T;version=Hapmap2;RS=rs808053874;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	124659916	124660015	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:121780751;1allele=C/T;version=Hapmap2;RS=rs808053874;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	124671492	124671591	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121792328;1allele=A/G;version=Hapmap2;RS=rs812500000;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	124677716	124677815	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121798554;1allele=A/C;version=Hapmap1;RS=rs132464496;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	124677816	124677915	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:121798654;1allele=G/-;version=Hapmap1;RS=rs132464499;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	124677827	124677926	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:121798665;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124766650	124766749	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:121884592;1allele=T/C;version=Hapmap2;RS=rs132464554;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	124766650	124766749	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121884592;1allele=T/C;version=Hapmap2;RS=rs132464554;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	124766679	124766778	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121884621;1allele=/TAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124766679	124766778	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:121884621;1allele=/TAT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124767478	124767577	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:121885420;1allele=C/T;version=Hapmap1;RS=rs132464558;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	124771757	124771856	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:121889698;1allele=G/C;version=Hapmap1;RS=rs132464618;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	124781791	124781890	.	+	.	Name=Ear_height;B73v2_pos=8:121899731;1allele=C/T;version=Hapmap2;RS=rs130855582;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	124782683	124782782	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121900623;1allele=A/G;version=Hapmap2;RS=rs130855595;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	124782879	124782978	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:121900819;1allele=T/C;version=Hapmap2;RS=rs130855598;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	124784709	124784808	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121902649;1allele=A/T;version=Hapmap2;RS=rs278558001;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	124786357	124786456	.	+	.	Name=Days_to_silk;B73v2_pos=8:121904297;1allele=T/G;version=Hapmap1;RS=rs130855617;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	124786396	124786495	.	+	.	Name=Days_to_silk;B73v2_pos=8:121904336;1allele=G/T;version=Hapmap2;RS=rs132464675;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	124787197	124787296	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:121905137;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124846232	124846331	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:121956643;1allele=A/G;version=Hapmap2;RS=rs827565017;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	124893090	124893189	.	+	.	Name=Tassel_length;B73v2_pos=8:121999543;1allele=G/A;version=Hapmap2;RS=rs820000020;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	124903147	124903246	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122042782;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124903155	124903254	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122042774;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124903738	124903837	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122042191;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124903738	124903837	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122042191;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124909941	124910040	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:122035988;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124909941	124910040	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122035988;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124912380	124912479	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122033549;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124913879	124913978	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122032050;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124913879	124913978	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:122032050;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124939315	124939414	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122006138;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124940854	124940953	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122004599;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	124949740	124949839	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:122059885;1allele=C/T;version=Hapmap2;RS=rs811107969;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	124950932	124951031	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122061077;1allele=C/T;version=Hapmap2;RS=rs845669614;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	124952484	124952583	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122062629;1allele=A/G;version=Hapmap2;RS=rs827663482;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	124953495	124953594	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122063640;1allele=C/A;version=Hapmap2;RS=rs726902016;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	124953495	124953594	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122063640;1allele=C/A;version=Hapmap2;RS=rs726902016;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	124954991	124955090	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:122065136;1allele=A/C;version=Hapmap2;RS=rs837484946;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	125036056	125036155	.	+	.	Name=Ear_height;B73v2_pos=8:122118793;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125036645	125036744	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122119382;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125039501	125039600	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:122125314;1allele=C/A;version=Hapmap2;RS=rs726902639;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	125047742	125047842	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:122132357;1allele=C/T;version=Hapmap2;RS=rs806457096;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125048108	125048207	.	+	.	Name=Days_to_silk;B73v2_pos=8:122132722;1allele=G/A;version=Hapmap2;RS=rs725016673;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125048108	125048207	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122132722;1allele=G/A;version=Hapmap2;RS=rs725016673;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125048108	125048207	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:122132722;1allele=G/A;version=Hapmap2;RS=rs725016673;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125067028	125067127	.	+	.	Name=Leaf_width;B73v2_pos=8:122151181;1allele=C/A;version=Hapmap2;RS=rs130855927;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	125070065	125070164	.	+	.	Name=Tassel_length;B73v2_pos=8:122154218;1allele=A/C;version=Hapmap2;RS=rs812507453;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	125172124	125172223	.	+	.	Name=Days_to_silk;B73v2_pos=8:122263450;1allele=C/T;version=Hapmap2;RS=rs850378435;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125173096	125173195	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122264422;1allele=G/A;version=Hapmap2;RS=rs847552583;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125174176	125174275	.	+	.	Name=Leaf_width;B73v2_pos=8:122265503;1allele=T/A;version=Hapmap2;RS=rs829058895;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	125229357	125229456	.	+	.	Name=Plant_height;B73v2_pos=8:122320857;1allele=T/C;version=Hapmap2;RS=rs132464825;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	125274060	125274159	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:122365361;1allele=G/T;version=Hapmap2;RS=rs843456564;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	125274403	125274502	.	+	.	Name=Leaf_width;B73v2_pos=8:122365704;1allele=G/T;version=Hapmap2;RS=rs810716609;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	125297956	125298055	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:122383655;1allele=G/A;version=Hapmap2;RS=rs827349577;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125298880	125298979	.	+	.	Name=Protein;B73v2_pos=8:122384579;1allele=G/A;version=Hapmap2;RS=rs823600886;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125341150	125341249	.	+	.	Name=Days_to_silk;B73v2_pos=8:122425747;1allele=G/C;version=Hapmap1;RS=rs130856318;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	125376188	125376287	.	+	.	Name=Leaf_width;B73v2_pos=8:122460794;1allele=T/A;version=Hapmap2;RS=rs130856354;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	125378815	125378914	.	+	.	Name=Plant_height;B73v2_pos=8:122463421;1allele=A/T;version=Hapmap2;RS=rs829666072;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	125379380	125379479	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122463986;1allele=C/G;version=Hapmap2;RS=rs130856365;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	125384747	125384846	.	+	.	Name=Leaf_width;B73v2_pos=8:122469353;1allele=C/A;version=Hapmap2;RS=rs130856386;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	125387104	125387203	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122471710;1allele=C/T;version=Hapmap2;RS=rs130856393;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125387213	125387312	.	+	.	Name=Ear_height;B73v2_pos=8:122471819;1allele=C/T;version=Hapmap2;RS=rs815169333;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125387213	125387312	.	+	.	Name=Plant_height;B73v2_pos=8:122471819;1allele=C/T;version=Hapmap2;RS=rs815169333;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125387905	125388004	.	+	.	Name=Plant_height;B73v2_pos=8:122472511;1allele=G/A;version=Hapmap2;RS=rs834229074;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125391306	125391405	.	+	.	Name=Leaf_width;B73v2_pos=8:122475454;1allele=T/C;version=Hapmap2;RS=rs1063867288;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	125392144	125392243	.	+	.	Name=Plant_height;B73v2_pos=8:122476292;1allele=G/A;version=Hapmap2;RS=rs811313578;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125393013	125393112	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122477161;1allele=G/A;version=Hapmap2;RS=rs849238443;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125397487	125397586	.	+	.	Name=Leaf_width;B73v2_pos=8:122481642;1allele=G/A;version=Hapmap2;RS=rs816359159;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125397592	125397691	.	+	.	Name=Leaf_width;B73v2_pos=8:122481747;1allele=G/A;version=Hapmap2;RS=rs845738917;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125399930	125400029	.	+	.	Name=Plant_height;B73v2_pos=8:122484085;1allele=C/A;version=Hapmap2;RS=rs839910863;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	125400047	125400146	.	+	.	Name=Leaf_width;B73v2_pos=8:122484202;1allele=C/T;version=Hapmap2;RS=rs130856416;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125412047	125412146	.	+	.	Name=Leaf_width;B73v2_pos=8:122499369;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125430143	125430242	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122519085;1allele=C/T;version=Hapmap2;RS=rs727384363;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125436592	125436691	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122525534;1allele=G/A;version=Hapmap2;RS=rs806988043;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125496649	125496748	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122622492;1allele=A/G;version=Hapmap2;RS=rs835531700;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125497918	125498017	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122621223;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125497918	125498017	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122621223;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125508762	125508861	.	+	.	Name=Starch;B73v2_pos=8:122610048;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125519388	125519487	.	+	.	Name=Days_to_silk;B73v2_pos=8:122599422;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125539822	125539921	.	+	.	Name=Height_above_ear;B73v2_pos=8:122651153;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125554341	125554440	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:122636634;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125554759	125554858	.	+	.	Name=Ear_height;B73v2_pos=8:122636216;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125557358	125557457	.	+	.	Name=Ear_height;B73v2_pos=8:122633617;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125560181	125560280	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122656443;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125599673	125599772	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:122696593;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125600798	125600897	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122697718;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125601161	125601260	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122698081;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125601182	125601281	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122698102;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125601947	125602046	.	+	.	Name=Tassel_length;B73v2_pos=8:122698867;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125603331	125603430	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:122700251;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	125876419	125876518	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:122753846;1allele=C/A;version=Hapmap2;RS=rs131179791;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	125898825	125898924	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:122774084;1allele=C/T;version=Hapmap2;RS=rs802982502;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125898832	125898931	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:122774091;1allele=C/T;version=Hapmap2;RS=rs835224676;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	125901349	125901448	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:122776608;1allele=G/A;version=Hapmap2;RS=rs828873243;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	125917348	125917447	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:122791190;1allele=A/G;version=Hapmap2;RS=rs812009562;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	125951800	125951899	.	+	.	Name=Height_above_ear;B73v2_pos=8:122825484;1allele=A/T;version=Hapmap2;RS=rs840490418;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	125951808	125951907	.	+	.	Name=Height_above_ear;B73v2_pos=8:122825492;1allele=A/G;version=Hapmap2;RS=rs821115422;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	126022571	126022670	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:122901230;1allele=C/G;version=Hapmap2;RS=rs278558525;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	126023373	126023472	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122902032;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126034771	126034870	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:122902909;1allele=C/T;version=Hapmap2;RS=rs278558536;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126036814	126036913	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:122904952;1allele=G/A;version=Hapmap2;RS=rs130856725;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	126037720	126037819	.	+	.	Name=Leaf_width;B73v2_pos=8:122905858;1allele=A/T;version=Hapmap2;RS=rs132465127;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	126045962	126046061	.	+	.	Name=Ear_height;B73v2_pos=8:122914100;1allele=G/A;version=Hapmap2;RS=rs809038406;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	126081382	126081481	.	+	.	Name=Leaf_width;B73v2_pos=8:122949292;1allele=T/A;version=Hapmap2;RS=rs130856866;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	126081421	126081520	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122949331;1allele=C/G;version=Hapmap2;RS=rs130856867;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	126081578	126081677	.	+	.	Name=Ear_height;B73v2_pos=8:122949488;1allele=T/C;version=Hapmap1;RS=rs130856869;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126082456	126082555	.	+	.	Name=Leaf_width;B73v2_pos=8:122950366;1allele=C/G;version=Hapmap2;RS=rs132465199;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	126083586	126083685	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:122951496;1allele=C/T;version=Hapmap2;RS=rs835178704;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126084323	126084422	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122952233;1allele=-/+;version=Hapmap2;RS=rs840679125;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	126108491	126108590	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:122988524;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126178557	126178656	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123044223;1allele=T/C;version=Hapmap1;RS=rs278558690;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126178609	126178708	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:123044275;1allele=G/C;version=Hapmap2;RS=rs819387178;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	126178729	126178828	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:123044395;1allele=C/T;version=Hapmap1;RS=rs132465280;2ref_allele=C;3alt_allele=CGT
chr8	Wallace_2014	SNP	126178965	126179064	.	+	.	Name=Ear_height;B73v2_pos=8:123044631;1allele=A/G;version=Hapmap1;RS=rs132465284;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	126190926	126191025	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:123056594;1allele=C/T;version=Hapmap2;RS=rs804569604;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126203868	126203967	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:123074155;1allele=T/C;version=Hapmap2;RS=rs838788124;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126211426	126211525	.	+	.	Name=Ear_height;B73v2_pos=8:123081128;1allele=G/A;version=Hapmap2;RS=rs130857114;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	126211803	126211902	.	+	.	Name=Ear_height;B73v2_pos=8:123081505;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126287934	126288033	.	+	.	Name=Ear_height;B73v2_pos=8:123136545;1allele=G/A;version=Hapmap2;RS=rs278558800;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	126288730	126288829	.	+	.	Name=Ear_height;B73v2_pos=8:123137341;1allele=T/C;version=Hapmap2;RS=rs130857218;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126299412	126299511	.	+	.	Name=Ear_height;B73v2_pos=8:123145019;1allele=T/G;version=Hapmap2;RS=rs828918154;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	126448339	126448438	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123272358;1allele=C/T;version=Hapmap2;RS=rs278558871;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126475222	126475321	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123297253;1allele=T/C;version=Hapmap2;RS=rs1062023124;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126504583	126504682	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123326592;1allele=G/A;version=Hapmap2;RS=rs814902735;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	126504583	126504682	.	+	.	Name=Ear_height;B73v2_pos=8:123326592;1allele=G/A;version=Hapmap2;RS=rs814902735;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	126520553	126520652	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123342566;1allele=C/T;version=Hapmap2;RS=rs724527241;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126535137	126535236	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123357150;1allele=G/A;version=Hapmap2;RS=rs846077497;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	126541810	126541909	.	+	.	Name=Ear_height;B73v2_pos=8:123363823;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126586496	126586595	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:123407731;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126623169	126623268	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:123459668;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126649412	126649511	.	+	.	Name=Ear_height;B73v2_pos=8:123471027;1allele=G/C;version=Hapmap1;RS=rs132465462;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	126649777	126649876	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:123471392;1allele=T/C;version=Hapmap2;RS=rs278558927;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126653524	126653623	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:123475139;1allele=C/A;version=Hapmap2;RS=rs130857486;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	126657478	126657577	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123479097;1allele=C/T;version=Hapmap2;RS=rs1061293081;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126657478	126657577	.	+	.	Name=Ear_height;B73v2_pos=8:123479097;1allele=C/T;version=Hapmap2;RS=rs1061293081;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126668704	126668803	.	+	.	Name=Ear_height;B73v2_pos=8:123490922;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126682667	126682766	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123505113;1allele=CCT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126682887	126682986	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:123505333;1allele=T/C;version=Hapmap2;RS=rs847478496;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126682887	126682986	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123505333;1allele=T/C;version=Hapmap2;RS=rs847478496;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126682925	126683024	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123505371;1allele=T/C;version=Hapmap2;RS=rs802259946;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126683695	126683794	.	+	.	Name=Ear_height;B73v2_pos=8:123506141;1allele=C/T;version=Hapmap2;RS=rs132465487;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126683695	126683794	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123506141;1allele=C/T;version=Hapmap2;RS=rs132465487;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126683695	126683794	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123506141;1allele=C/T;version=Hapmap2;RS=rs132465487;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126684669	126684768	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123507115;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126684669	126684768	.	+	.	Name=Ear_height;B73v2_pos=8:123507115;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126690567	126690666	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:123513013;1allele=G/T;version=Hapmap2;RS=rs130857537;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	126690615	126690714	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:123513061;1allele=A/T;version=Hapmap2;RS=rs132465515;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	126690974	126691073	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:123513420;1allele=C/T;version=Hapmap2;RS=rs132465523;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126714274	126714373	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:123537415;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126717769	126717868	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123540910;1allele=G/T;version=Hapmap2;RS=rs132465658;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	126718154	126718253	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123541304;1allele=C/G;version=Hapmap2;RS=rs726883590;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	126718849	126718948	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123541999;1allele=T/A;version=Hapmap2;RS=rs816493586;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	126740673	126740772	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:123573349;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126752725	126752824	.	+	.	Name=Leaf_width;B73v2_pos=8:123586249;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	126766122	126766221	.	+	.	Name=Tassel_length;B73v2_pos=8:123599555;1allele=T/C;version=Hapmap2;RS=rs839745303;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	126766521	126766620	.	+	.	Name=Leaf_width;B73v2_pos=8:123599954;1allele=A/G;version=Hapmap2;RS=rs130857599;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	126769830	126769929	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123603261;1allele=A/T;version=Hapmap2;RS=rs278558993;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	126769830	126769929	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123603261;1allele=A/T;version=Hapmap2;RS=rs278558993;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	126771173	126771272	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123604604;1allele=G/A;version=Hapmap2;RS=rs132465678;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	126771287	126771386	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123604718;1allele=G/A;version=Hapmap2;RS=rs278559009;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	126775748	126775847	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:123609179;1allele=C/T;version=Hapmap2;RS=rs130857640;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	126798320	126798419	.	+	.	Name=Cob_diameter;B73v2_pos=8:123631186;1allele=A/G;version=Hapmap2;RS=rs1061289516;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	126953294	126953393	.	+	.	Name=Cob_diameter;B73v2_pos=8:123775197;1allele=T/G;version=Hapmap1;RS=rs132465835;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	126981669	126981768	.	+	.	Name=Cob_diameter;B73v2_pos=8:123912793;1allele=C/G;version=Hapmap2;RS=rs130857981;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	126981799	126981898	.	+	.	Name=Leaf_length;B73v2_pos=8:123912923;1allele=A/G;version=Hapmap2;RS=rs278559259;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	126987818	126987917	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123812737;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127006702	127006801	.	+	.	Name=Ear_height;B73v2_pos=8:123801645;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127040459	127040558	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:123843422;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127040459	127040558	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123843422;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127043128	127043227	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123846091;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127043700	127043799	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123846663;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127128101	127128200	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:123949825;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127139647	127139746	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:123937231;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127139647	127139746	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123937231;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127214705	127214804	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:124014848;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127224497	127224596	.	+	.	Name=Days_to_silk;B73v2_pos=8:124003848;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127248154	127248253	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:123980192;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127347017	127347116	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:124178687;1allele=G/A;version=Hapmap2;RS=rs807935060;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	127390051	127390150	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:124208446;1allele=T/C;version=Hapmap2;RS=rs832160138;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	127391194	127391293	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:124207303;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127392626	127392725	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124205871;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127392649	127392748	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124205848;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127394040	127394139	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:124204457;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127401197	127401296	.	+	.	Name=Ear_height;B73v2_pos=8:124223884;1allele=A/G;version=Hapmap2;RS=rs830282416;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127402338	127402437	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:124225025;1allele=A/G;version=Hapmap2;RS=rs130858345;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127403252	127403351	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:124225939;1allele=C/T;version=Hapmap2;RS=rs130858349;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	127403486	127403585	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124226173;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127403488	127403587	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:124226175;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127451177	127451276	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:124273857;1allele=G/A;version=Hapmap2;RS=rs130858369;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127460823	127460922	.	+	.	Name=Days_to_silk;B73v2_pos=8:124283503;1allele=A/G;version=Hapmap2;RS=rs132466054;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127460823	127460922	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124283503;1allele=A/G;version=Hapmap2;RS=rs132466054;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127464783	127464882	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124287463;1allele=G/A;version=Hapmap1;RS=rs130858415;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127469269	127469368	.	+	.	Name=Leaf_length;B73v2_pos=8:124291949;1allele=G/T;version=Hapmap2;RS=rs845093103;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	127508262	127508361	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:124330656;1allele=C/T;version=Hapmap2;RS=rs846551643;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	127532984	127533083	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124355380;1allele=C/T;version=Hapmap2;RS=rs823184012;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	127534481	127534580	.	+	.	Name=Leaf_length;B73v2_pos=8:124356877;1allele=A/G;version=Hapmap2;RS=rs130858456;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127535243	127535342	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:124357639;1allele=C/G;version=Hapmap2;RS=rs132466120;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	127536644	127536743	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124359040;1allele=T/G;version=Hapmap2;RS=rs1061367992;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	127539972	127540071	.	+	.	Name=Plant_height;B73v2_pos=8:124362911;1allele=T/C;version=Hapmap2;RS=rs829978751;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	127540181	127540280	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:124363120;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127637543	127637642	.	+	.	Name=Ear_height;B73v2_pos=8:124460303;1allele=T/C;version=Hapmap2;RS=rs278559514;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	127637543	127637642	.	+	.	Name=Plant_height;B73v2_pos=8:124460303;1allele=T/C;version=Hapmap2;RS=rs278559514;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	127637543	127637642	.	+	.	Name=Days_to_silk;B73v2_pos=8:124460303;1allele=T/C;version=Hapmap2;RS=rs278559514;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	127637543	127637642	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:124460303;1allele=T/C;version=Hapmap2;RS=rs278559514;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	127637543	127637642	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:124460303;1allele=T/C;version=Hapmap2;RS=rs278559514;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	127643386	127643485	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:124466146;1allele=G/A;version=Hapmap2;RS=rs812806687;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127645720	127645819	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124468485;1allele=A/G;version=Hapmap2;RS=rs843457964;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127721382	127721481	.	+	.	Name=Days_to_silk;B73v2_pos=8:124544274;1allele=A/G;version=Hapmap2;RS=rs818479696;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127774060	127774159	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:124588343;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127813770	127813869	.	+	.	Name=Leaf_width;B73v2_pos=8:124644241;1allele=T/G;version=Hapmap2;RS=rs132466418;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	127814006	127814105	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124644477;1allele=A/C;version=Hapmap1;RS=rs130858719;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127814077	127814176	.	+	.	Name=Days_to_silk;B73v2_pos=8:124644548;1allele=-/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127816174	127816273	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:124646645;1allele=T/G;version=Hapmap1;RS=rs132466482;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	127816174	127816273	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124646645;1allele=T/G;version=Hapmap1;RS=rs132466482;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	127816520	127816619	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124646991;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127818894	127818993	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124649365;1allele=C/T;version=Hapmap2;RS=rs726312215;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	127818894	127818993	.	+	.	Name=Days_to_silk;B73v2_pos=8:124649365;1allele=C/T;version=Hapmap2;RS=rs726312215;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	127819642	127819741	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:124650113;1allele=G/A;version=Hapmap2;RS=rs726784923;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127819642	127819741	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124650113;1allele=G/A;version=Hapmap2;RS=rs726784923;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127819838	127819937	.	+	.	Name=Plant_height;B73v2_pos=8:124650309;1allele=G/T;version=Hapmap2;RS=rs827601390;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	127820372	127820471	.	+	.	Name=Leaf_length;B73v2_pos=8:124650843;1allele=G/A;version=Hapmap2;RS=rs724737349;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127820466	127820565	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124650937;1allele=G/A;version=Hapmap2;RS=rs130858744;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127820755	127820854	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:124651226;1allele=G/A;version=Hapmap2;RS=rs836614494;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127820755	127820854	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124651226;1allele=G/A;version=Hapmap2;RS=rs836614494;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127821494	127821593	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124651965;1allele=A/G;version=Hapmap1;RS=rs132466553;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127821525	127821624	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:124651996;1allele=A/G;version=Hapmap1;RS=rs132466554;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	127823230	127823329	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:124653701;1allele=C/A;version=Hapmap2;RS=rs849239777;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	127825912	127826011	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124656383;1allele=G/A;version=Hapmap2;RS=rs130858762;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	127960952	127961051	.	+	.	Name=Height_above_ear;B73v2_pos=8:124780835;1allele=C/T;version=Hapmap2;RS=rs826755023;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	127973903	127974002	.	+	.	Name=Ear_height;B73v2_pos=8:124793786;1allele=A/T;version=Hapmap2;RS=rs130858873;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	127980892	127980991	.	+	.	Name=Leaf_width;B73v2_pos=8:124800774;1allele=C/T;version=Hapmap2;RS=rs278559700;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	127992360	127992459	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124845248;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127992394	127992493	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124845214;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127992809	127992908	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124844799;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127993989	127994088	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124843619;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127994065	127994164	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:124843543;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127994710	127994809	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124842898;1allele=/TCGCTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127996109	127996208	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:124841499;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127998181	127998280	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:124839431;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127998252	127998351	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:124839360;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127999230	127999329	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124838382;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127999230	127999329	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124838382;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127999980	128000079	.	+	.	Name=Days_to_silk;B73v2_pos=8:124837632;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	127999980	128000079	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:124837632;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128000093	128000192	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:124837519;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128000888	128000987	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124836724;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128003409	128003508	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124834201;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128003409	128003508	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124834201;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128003851	128003950	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:124833759;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128016718	128016817	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124883973;1allele=C/T;version=Hapmap2;RS=rs848839163;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	128016718	128016817	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124883973;1allele=C/T;version=Hapmap2;RS=rs848839163;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	128037936	128038035	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:124847310;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128064302	128064401	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:124891761;1allele=A/G;version=Hapmap2;RS=rs841135139;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	128076605	128076704	.	+	.	Name=Tassel_length;B73v2_pos=8:124904065;1allele=T/C;version=Hapmap2;RS=rs817518297;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	128118625	128118724	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:124936232;1allele=G/T;version=Hapmap2;RS=rs803583337;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	128118625	128118724	.	+	.	Name=Days_to_silk;B73v2_pos=8:124936232;1allele=G/T;version=Hapmap2;RS=rs803583337;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	128118625	128118724	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:124936232;1allele=G/T;version=Hapmap2;RS=rs803583337;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	128135403	128135502	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:124953011;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128191721	128191820	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125007238;1allele=A/G;version=Hapmap1;RS=rs132466959;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	128191724	128191823	.	+	.	Name=Days_to_silk;B73v2_pos=8:125007241;1allele=G/C;version=Hapmap1;RS=rs132466960;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	128191955	128192054	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:125007472;1allele=C/T;version=Hapmap2;RS=rs727329814;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	128191955	128192054	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125007472;1allele=C/T;version=Hapmap2;RS=rs727329814;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	128191959	128192058	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:125007476;1allele=A/G;version=Hapmap2;RS=rs130859223;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	128191959	128192058	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125007476;1allele=A/G;version=Hapmap2;RS=rs130859223;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	128192247	128192346	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:125007764;1allele=G/T;version=Hapmap2;RS=rs827552960;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	128239980	128240079	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:125059847;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128252365	128252464	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:125091743;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128253560	128253659	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125090548;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128260328	128260427	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:125083779;1allele=C/T;version=Hapmap2;RS=rs813639062;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	128260328	128260427	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125083779;1allele=C/T;version=Hapmap2;RS=rs813639062;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	128284400	128284499	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125097038;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128287309	128287408	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:125099948;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128372678	128372777	.	+	.	Name=Days_to_silk;B73v2_pos=8:125178341;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128373282	128373381	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:125178945;1allele=A/T;version=Hapmap2;RS=rs840886333;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	128425505	128425604	.	+	.	Name=Days_to_silk;B73v2_pos=8:125250992;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128446198	128446297	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:125230297;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	128493288	128493387	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:125295256;1allele=T/C;version=Hapmap2;RS=rs727442204;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	128493322	128493421	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125295290;1allele=A/G;version=Hapmap2;RS=rs725039435;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	128497467	128497566	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:125299435;1allele=G/A;version=Hapmap1;RS=rs132467239;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	128503237	128503336	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:125305205;1allele=cnv;version=CNV_genic;RS=rs130859548;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	128515583	128515682	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:125317545;1allele=T/A;version=Hapmap2;RS=rs1064569193;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	128588582	128588681	.	+	.	Name=Days_to_silk;B73v2_pos=8:125389835;1allele=C/T;version=Hapmap2;RS=rs823378127;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	128667818	128667917	.	+	.	Name=Days_to_silk;B73v2_pos=8:125469002;1allele=G/A;version=Hapmap2;RS=rs812005213;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	128669440	128669539	.	+	.	Name=Protein;B73v2_pos=8:125470624;1allele=C/T;version=Hapmap2;RS=rs724545591;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	129078163	129078262	.	+	.	Name=Height_above_ear;B73v2_pos=8:125511118;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	129078421	129078520	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:125511376;1allele=/GG;version=Hapmap1;RS=rs803995330;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	129078906	129079005	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:125511861;1allele=A/G;version=Hapmap2;RS=rs130859797;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	129079388	129079487	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125512343;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	129080330	129080429	.	+	.	Name=Ear_height;B73v2_pos=8:125513285;1allele=A/G;version=Hapmap2;RS=rs130859806;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	129085394	129085493	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125518349;1allele=C/A;version=Hapmap2;RS=rs829672692;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	129085564	129085663	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125518519;1allele=C/T;version=Hapmap2;RS=rs824079410;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	129086647	129086746	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:125519602;1allele=G/A;version=Hapmap2;RS=rs819287182;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	129089588	129089687	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:125522543;1allele=T/G;version=Hapmap2;RS=rs725045373;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	129089588	129089687	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:125522543;1allele=T/G;version=Hapmap2;RS=rs725045373;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	129090021	129090120	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125522976;1allele=A/G;version=Hapmap2;RS=rs130859862;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	129091433	129091532	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:125524388;1allele=G/A;version=Hapmap2;RS=rs130859883;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	129235123	129235222	.	+	.	Name=Height_above_ear;B73v2_pos=8:125668305;1allele=G/T;version=Hapmap2;RS=rs822078970;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	129352954	129353053	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:125784158;1allele=T/C;version=Hapmap2;RS=rs826523997;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	129353491	129353590	.	+	.	Name=Days_to_silk;B73v2_pos=8:125784695;1allele=G/A;version=Hapmap2;RS=rs278560725;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	129377221	129377320	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:125808430;1allele=T/C;version=Hapmap2;RS=rs846793078;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	129377282	129377381	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125808491;1allele=G/A;version=Hapmap2;RS=rs130860437;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	129386070	129386169	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:125817280;1allele=G/A;version=Hapmap2;RS=rs827032570;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	129386085	129386184	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:125817295;1allele=C/T;version=Hapmap2;RS=rs1061186173;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	129431106	129431205	.	+	.	Name=Leaf_length;B73v2_pos=8:125856175;1allele=C/G;version=Hapmap2;RS=rs842804711;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	129463058	129463157	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:125970107;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	129492813	129492912	.	+	.	Name=Leaf_width;B73v2_pos=8:125925137;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	129538231	129538330	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:125955123;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	129587840	129587939	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:125981894;1allele=T/G;version=Hapmap2;RS=rs839614501;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	129602407	129602506	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:125997484;1allele=C/G;version=Hapmap2;RS=rs830067871;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	129602953	129603052	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:125998030;1allele=T/G;version=Hapmap2;RS=rs727463987;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	129754838	129754937	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:126139992;1allele=C/T;version=Hapmap2;RS=rs837810134;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	129815078	129815177	.	+	.	Name=Leaf_length;B73v2_pos=8:126186459;1allele=A/T;version=Hapmap2;RS=rs805526398;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	129837746	129837845	.	+	.	Name=Days_to_silk;B73v2_pos=8:126209127;1allele=C/T;version=Hapmap2;RS=rs839357009;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	129882008	129882107	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:126252706;1allele=A/G;version=Hapmap2;RS=rs814018347;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	129909299	129909398	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:126280656;1allele=T/C;version=Hapmap2;RS=rs807148602;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	130139091	130139190	.	+	.	Name=Protein;B73v2_pos=8:126507047;1allele=A/G;version=Hapmap2;RS=rs830226436;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	130236968	130237067	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:126598288;1allele=G/C;version=Hapmap2;RS=rs278561616;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	130283761	130283860	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:126645133;1allele=T/C;version=Hapmap1;RS=rs132467643;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	130364262	130364361	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:126725240;1allele=T/C;version=Hapmap2;RS=rs808774240;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	130409803	130409902	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:126770781;1allele=G/A;version=Hapmap2;RS=rs130862463;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	130453323	130453422	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:126820890;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	130511878	130511977	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:126958262;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	130531430	130531529	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:126978070;1allele=C/A;version=Hapmap2;RS=rs724890768;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	130570039	130570138	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:127010267;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	130818509	130818608	.	+	.	Name=Days_to_silk;B73v2_pos=8:127259298;1allele=G/T;version=Hapmap1;RS=rs132467804;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	130848625	130848724	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:127289665;1allele=C/T;version=Hapmap2;RS=rs278561887;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	130848654	130848753	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:127289694;1allele=C/T;version=Hapmap2;RS=rs278561888;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	130937020	130937119	.	+	.	Name=Leaf_length;B73v2_pos=8:127376460;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	130990265	130990362	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:127437945;1allele=A/G;version=Hapmap2;RS=rs827451049;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	131082145	131082244	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:127528185;1allele=G/A;version=Hapmap2;RS=rs844653089;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	131152277	131152376	.	+	.	Name=Days_to_silk;B73v2_pos=8:127597980;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131162328	131162427	.	+	.	Name=Days_to_silk;B73v2_pos=8:127616828;1allele=C/T;version=Hapmap2;RS=rs813630641;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	131167516	131167615	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:127622016;1allele=C/G;version=Hapmap2;RS=rs130863157;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	131294676	131294775	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:127743265;1allele=C/T;version=Hapmap1;RS=rs132467972;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	131344038	131344137	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:127775255;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131344731	131344830	.	+	.	Name=Leaf_length;B73v2_pos=8:127774562;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131351001	131351100	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:127768291;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131351625	131351724	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:127767667;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131352301	131352400	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:127766991;1allele=C/T;version=Hapmap2;RS=rs130863574;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	131353843	131353942	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:127765443;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131413864	131413963	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:127835363;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131414251	131414350	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:127834976;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	131872664	131872763	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:128294756;1allele=G/C;version=Hapmap2;RS=rs869641082;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	131873969	131874068	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:128296061;1allele=C/G;version=Hapmap2;RS=rs130864846;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	131874984	131875083	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128297076;1allele=C/T;version=Hapmap2;RS=rs816035577;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	131874996	131875095	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128297088;1allele=C/A;version=Hapmap2;RS=rs727049719;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	131884026	131884125	.	+	.	Name=Leaf_length;B73v2_pos=8:128306120;1allele=G/A;version=Hapmap2;RS=rs278563253;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	132006192	132006291	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:128428318;1allele=A/G;version=Hapmap2;RS=rs130865035;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	132006600	132006699	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:128428726;1allele=C/T;version=Hapmap2;RS=rs278563324;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	132100029	132100128	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:128498882;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	132128312	132128411	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:128541691;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	132143646	132143745	.	+	.	Name=Height_above_ear;B73v2_pos=8:128557025;1allele=C/T;version=Hapmap1;RS=rs132468305;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	132190124	132190223	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:128603505;1allele=G/A;version=Hapmap2;RS=rs806091389;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	132190251	132190350	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:128603632;1allele=A/G;version=Hapmap2;RS=rs1063043010;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132249025	132249124	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:128664985;1allele=A/T;version=Hapmap2;RS=rs1060969760;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	132263815	132263914	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:128634224;1allele=A/G;version=Hapmap2;RS=rs839756581;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132265918	132266017	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:128636326;1allele=C/T;version=Hapmap2;RS=rs724424114;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132275999	132276098	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:128684470;1allele=G/A;version=Hapmap2;RS=rs802006042;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	132288572	132288671	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128697044;1allele=A/T;version=Hapmap2;RS=rs805457159;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	132300222	132300321	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:128708694;1allele=C/T;version=Hapmap2;RS=rs815259054;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132305968	132306067	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:128714441;1allele=A/G;version=Hapmap2;RS=rs724655063;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132331775	132331874	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128731553;1allele=C/T;version=Hapmap2;RS=rs837219472;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132341975	132342074	.	+	.	Name=Leaf_length;B73v2_pos=8:128751404;1allele=A/G;version=Hapmap1;RS=rs818297612;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132401312	132401411	.	+	.	Name=Height_above_ear;B73v2_pos=8:128811224;1allele=G/C;version=Hapmap2;RS=rs130865474;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	132402324	132402423	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:128812236;1allele=A/T;version=Hapmap2;RS=rs132468446;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	132402357	132402456	.	+	.	Name=Height_above_ear;B73v2_pos=8:128812269;1allele=C/T;version=Hapmap2;RS=rs278563659;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132424822	132424921	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128834734;1allele=C/T;version=Hapmap2;RS=rs816680202;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132428724	132428823	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128838636;1allele=G/A;version=Hapmap2;RS=rs130865552;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132430583	132430682	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128840490;1allele=G/A;version=Hapmap2;RS=rs816998438;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	132430583	132430682	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:128840490;1allele=G/A;version=Hapmap2;RS=rs816998438;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	132431590	132431689	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:128841497;1allele=G/T;version=Hapmap2;RS=rs278563706;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	132432364	132432463	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:128842271;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	132432515	132432614	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:128842422;1allele=C/T;version=Hapmap1;RS=rs132468468;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132432515	132432614	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:128842422;1allele=C/T;version=Hapmap1;RS=rs132468468;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132432515	132432614	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:128842422;1allele=C/T;version=Hapmap1;RS=rs132468468;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132432515	132432614	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:128842422;1allele=C/T;version=Hapmap2;RS=rs132468468;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132433015	132433114	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:128842922;1allele=A/T;version=Hapmap2;RS=rs1064136948;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	132491040	132491139	.	+	.	Name=Tassel_length;B73v2_pos=8:128901139;1allele=A/T;version=Hapmap2;RS=rs278563841;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	132506224	132506323	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:128916562;1allele=C/T;version=Hapmap2;RS=rs833657240;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132526246	132526345	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:128936534;1allele=A/G;version=Hapmap2;RS=rs847097649;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132537036	132537135	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:128947324;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	132537474	132537573	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:128947762;1allele=T/C;version=Hapmap2;RS=rs278563905;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132537577	132537676	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:128947865;1allele=T/C;version=Hapmap2;RS=rs130865730;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132537964	132538063	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:128948252;1allele=C/T;version=Hapmap2;RS=rs278563912;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	132548750	132548849	.	+	.	Name=Leaf_width;B73v2_pos=8:128958240;1allele=C/T;version=Hapmap2;RS=rs824474219;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132597567	132597666	.	+	.	Name=Protein;B73v2_pos=8:129007025;1allele=T/G;version=Hapmap2;RS=rs278564093;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	132644618	132644717	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:129054313;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	132711622	132711721	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129116805;1allele=A/G;version=Hapmap2;RS=rs803993847;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132711622	132711721	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:129116805;1allele=A/G;version=Hapmap2;RS=rs803993847;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132728856	132728954	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:129135352;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	132775345	132775444	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:129181859;1allele=C/A;version=Hapmap2;RS=rs278564542;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	132802773	132802872	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:129209307;1allele=A/G;version=Hapmap2;RS=rs839792561;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	132934037	132934136	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129341141;1allele=C/T;version=Hapmap2;RS=rs130866930;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	132989857	132989956	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:129417995;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	132998597	132998696	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129409255;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	133017877	133017976	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129379639;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	133018394	133018493	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:129379121;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	133068895	133068994	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129486359;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	133078386	133078485	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129495811;1allele=C/G;version=Hapmap2;RS=rs130867218;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	133080434	133080533	.	+	.	Name=Days_to_silk;B73v2_pos=8:129497859;1allele=G/A;version=Hapmap2;RS=rs130867237;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	133080434	133080533	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129497859;1allele=G/A;version=Hapmap2;RS=rs130867237;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	133087135	133087234	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129504560;1allele=A/C;version=Hapmap2;RS=rs130867281;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	133246616	133246715	.	+	.	Name=Leaf_length;B73v2_pos=8:129668579;1allele=G/A;version=Hapmap2;RS=rs829387209;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	133338383	133338482	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:129755407;1allele=C/T;version=Hapmap2;RS=rs812119966;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	133357057	133357156	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:129774082;1allele=T/C;version=Hapmap1;RS=rs132468929;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	133437814	133437913	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:129859841;1allele=T/G;version=Hapmap2;RS=rs821218443;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	133451397	133451496	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:129905753;1allele=A/G;version=Hapmap2;RS=rs278565245;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	133506896	133506995	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:129936667;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	133528065	133528164	.	+	.	Name=Leaf_length;B73v2_pos=8:129957837;1allele=C/T;version=Hapmap2;RS=rs802552684;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	133531616	133531715	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:129961389;1allele=A/G;version=Hapmap2;RS=rs724511977;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	133661515	133661614	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:130098144;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	134027359	134027458	.	+	.	Name=Stalk_strength;B73v2_pos=8:130431406;1allele=A/G;version=Hapmap2;RS=rs802894794;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	134061766	134061865	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:130465816;1allele=T/C;version=Hapmap2;RS=rs1061929875;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	134087890	134087989	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:130485590;1allele=C/G;version=Hapmap2;RS=rs820360131;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	134087890	134087989	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:130485590;1allele=C/G;version=Hapmap2;RS=rs820360131;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	134117970	134118069	.	+	.	Name=Stalk_strength;B73v2_pos=8:130515353;1allele=T/C;version=Hapmap2;RS=rs846882287;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	134154076	134154175	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:130551482;1allele=G/T;version=Hapmap2;RS=rs831831935;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	134210164	134210263	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:130608795;1allele=G/A;version=Hapmap2;RS=rs829992161;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	134211138	134211237	.	+	.	Name=Stalk_strength;B73v2_pos=8:130609769;1allele=G/A;version=Hapmap2;RS=rs817210607;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	134253554	134253653	.	+	.	Name=Leaf_length;B73v2_pos=8:130680681;1allele=T/G;version=Hapmap2;RS=rs801490975;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	134254571	134254670	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:130681698;1allele=A/T;version=Hapmap2;RS=rs847890979;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	134320286	134320385	.	+	.	Name=Cob_diameter;B73v2_pos=8:130724855;1allele=T/C;version=Hapmap2;RS=rs278566306;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	134322677	134322776	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:130727247;1allele=G/T;version=Hapmap2;RS=rs130869424;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	134385602	134385701	.	+	.	Name=Leaf_length;B73v2_pos=8:130771387;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	134431026	134431125	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:130831900;1allele=C/A;version=Hapmap2;RS=rs808775719;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	134442000	134442099	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:130842875;1allele=T/C;version=Hapmap2;RS=rs278566668;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	134452890	134452989	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:130853765;1allele=G/A;version=Hapmap2;RS=rs812854778;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	134466753	134466852	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:24576813;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	134475871	134475970	.	+	.	Name=Tassel_length;B73v2_pos=8:130877688;1allele=G/A;version=Hapmap2;RS=rs836619951;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	134477698	134477797	.	+	.	Name=Leaf_width;B73v2_pos=8:130879515;1allele=G/A;version=Hapmap2;RS=rs819705688;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	134483969	134484068	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:130885786;1allele=A/C;version=Hapmap2;RS=rs826299972;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	134488982	134489081	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:130890799;1allele=G/A;version=Hapmap2;RS=rs724707689;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	134567804	134567903	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:130982994;1allele=G/A;version=Hapmap2;RS=rs725098685;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	134610370	134610469	.	+	.	Name=Leaf_length;B73v2_pos=8:131026167;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	134712635	134712734	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:131126799;1allele=T/G;version=Hapmap2;RS=rs809132964;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	134716441	134716540	.	+	.	Name=Height_above_ear;B73v2_pos=8:131130605;1allele=T/C;version=Hapmap2;RS=rs727360026;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	134717123	134717222	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:131131287;1allele=T/A;version=Hapmap2;RS=rs832656539;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	134756765	134756864	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:131170776;1allele=G/T;version=Hapmap2;RS=rs823216016;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	134760067	134760166	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:131174080;1allele=C/T;version=Hapmap2;RS=rs824345727;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	134760067	134760166	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131174080;1allele=C/T;version=Hapmap2;RS=rs824345727;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	134764512	134764611	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:131178525;1allele=T/G;version=Hapmap2;RS=rs805277826;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	134764512	134764611	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:131178525;1allele=T/G;version=Hapmap2;RS=rs805277826;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	134765263	134765362	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:131179276;1allele=T/C;version=Hapmap2;RS=rs132470094;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	134794867	134794966	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:131209179;1allele=C/T;version=Hapmap2;RS=rs810539825;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	134798460	134798559	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:131212772;1allele=G/C;version=Hapmap2;RS=rs840689189;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	134851340	134851439	.	+	.	Name=Plant_height;B73v2_pos=1:253786437;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	134928443	134928542	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:131334024;1allele=T/A;version=Hapmap2;RS=rs130870674;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	134928665	134928764	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131334246;1allele=C/T;version=Hapmap2;RS=rs130870678;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	135088171	135088270	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:131485978;1allele=C/T;version=Hapmap2;RS=rs130870934;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135088236	135088335	.	+	.	Name=Days_to_silk;B73v2_pos=8:131486043;1allele=C/T;version=Hapmap2;RS=rs130870936;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135102560	135102659	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:131500366;1allele=G/T;version=Hapmap2;RS=rs823475010;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	135102839	135102938	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131500645;1allele=G/C;version=Hapmap2;RS=rs820328581;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	135118890	135118989	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:131516698;1allele=T/C;version=Hapmap2;RS=rs726809098;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	135120671	135120770	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131518479;1allele=A/T;version=Hapmap2;RS=rs1060775632;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	135121588	135121687	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131519396;1allele=C/A;version=Hapmap2;RS=rs820779079;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	135121737	135121836	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:131519545;1allele=G/A;version=Hapmap2;RS=rs130871024;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	135122445	135122544	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:131520253;1allele=A/G;version=Hapmap2;RS=rs807094899;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135122445	135122544	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:131520253;1allele=A/G;version=Hapmap2;RS=rs807094899;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135122445	135122544	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:131520253;1allele=A/G;version=Hapmap2;RS=rs807094899;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135123971	135124070	.	+	.	Name=Days_to_silk;B73v2_pos=8:131521779;1allele=C/T;version=Hapmap2;RS=rs130871044;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135124378	135124477	.	+	.	Name=Days_to_silk;B73v2_pos=8:131522186;1allele=G/A;version=Hapmap2;RS=rs130871048;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	135124378	135124477	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:131522186;1allele=G/A;version=Hapmap2;RS=rs130871048;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	135128320	135128419	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131526128;1allele=C/T;version=Hapmap2;RS=rs130871093;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135129033	135129132	.	+	.	Name=Days_to_silk;B73v2_pos=8:131526841;1allele=A/G;version=Hapmap1;RS=rs130871097;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135131354	135131453	.	+	.	Name=Days_to_silk;B73v2_pos=8:131529162;1allele=G/A;version=Hapmap1;RS=rs132470433;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	135131745	135131844	.	+	.	Name=Days_to_silk;B73v2_pos=8:131529553;1allele=C/A;version=Hapmap2;RS=rs130871098;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135134190	135134289	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131531998;1allele=G/C;version=Hapmap2;RS=rs130871107;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	135135524	135135623	.	+	.	Name=Leaf_length;B73v2_pos=8:131533332;1allele=A/T;version=Hapmap2;RS=rs130871125;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	135290766	135290865	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:131684515;1allele=A/G;version=Hapmap2;RS=rs817985146;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135301379	135301478	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:131695128;1allele=C/T;version=Hapmap2;RS=rs132470624;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135560986	135561085	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:131947399;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	135561928	135562027	.	+	.	Name=Leaf_length;B73v2_pos=8:131948341;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	135573474	135573573	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:131967293;1allele=T/C;version=Hapmap1;RS=rs132470849;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135590749	135590848	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:131984568;1allele=C/G;version=Hapmap2;RS=rs130871967;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135620152	135620251	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:131962570;1allele=T/C;version=Hapmap2;RS=rs278567758;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	135669280	135669379	.	+	.	Name=Cob_diameter;B73v2_pos=8:132059388;1allele=G/A;version=Hapmap2;RS=rs130872127;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135670208	135670307	.	+	.	Name=Cob_diameter;B73v2_pos=8:132060316;1allele=G/A;version=Hapmap2;RS=rs843055176;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	135672107	135672206	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:132062215;1allele=T/C;version=Hapmap1;RS=rs132470938;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	135678052	135678151	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:132068160;1allele=C/T;version=Hapmap2;RS=rs130872212;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135678052	135678151	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:132068160;1allele=C/T;version=Hapmap2;RS=rs130872212;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135686561	135686660	.	+	.	Name=Leaf_length;B73v2_pos=8:132013913;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	135720695	135720794	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:132104542;1allele=T/C;version=Hapmap2;RS=rs130872258;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135723787	135723886	.	+	.	Name=Cob_diameter;B73v2_pos=8:132107634;1allele=C/T;version=Hapmap2;RS=rs726256471;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135724046	135724145	.	+	.	Name=Cob_diameter;B73v2_pos=8:132107893;1allele=C/T;version=Hapmap2;RS=rs130872280;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	135786331	135786430	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:132171213;1allele=A/G;version=Hapmap2;RS=rs818867240;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	135786619	135786718	.	+	.	Name=Cob_diameter;B73v2_pos=8:132171501;1allele=T/G;version=Hapmap2;RS=rs130872307;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	135891147	135891246	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:132270911;1allele=C/G;version=Hapmap2;RS=rs130872484;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	135892754	135892853	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:132272518;1allele=C/T;version=Hapmap2;RS=rs823890300;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	135917666	135917765	.	+	.	Name=Cob_diameter;B73v2_pos=8:132297469;1allele=C/G;version=Hapmap1;RS=rs1062605376;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	135962526	135962625	.	+	.	Name=Leaf_length;B73v2_pos=8:132340418;1allele=A/G;version=Hapmap2;RS=rs804645177;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136029760	136029859	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:132408485;1allele=C/T;version=Hapmap2;RS=rs726977171;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136029760	136029859	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:132408485;1allele=C/T;version=Hapmap2;RS=rs726977171;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136029906	136030005	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:132408631;1allele=G/T;version=Hapmap2;RS=rs132471225;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	136076472	136076571	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:132455176;1allele=C/A;version=Hapmap2;RS=rs130872690;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	136086473	136086572	.	+	.	Name=Leaf_length;B73v2_pos=8:132465180;1allele=G/A;version=Hapmap2;RS=rs804268148;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	136103398	136103497	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:132482106;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136107451	136107550	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:132486165;1allele=C/T;version=Hapmap2;RS=rs839597882;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136169489	136169588	.	+	.	Name=Days_to_silk;B73v2_pos=8:132540645;1allele=G/T;version=Hapmap2;RS=rs833595308;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	136169489	136169588	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:132540645;1allele=G/T;version=Hapmap2;RS=rs833595308;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	136169489	136169588	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:132540645;1allele=G/T;version=Hapmap2;RS=rs833595308;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	136170958	136171057	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:132542114;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136171011	136171110	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:132542167;1allele=A/C;version=Hapmap2;RS=rs811207043;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	136182427	136182526	.	+	.	Name=Days_to_silk;B73v2_pos=8:132560244;1allele=G/A;version=Hapmap2;RS=rs828551612;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	136182594	136182693	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:132560411;1allele=G/T;version=Hapmap2;RS=rs278568617;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	136183227	136183326	.	+	.	Name=Days_to_silk;B73v2_pos=8:132561044;1allele=C/T;version=Hapmap2;RS=rs278568623;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136183385	136183484	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:132561202;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136188326	136188425	.	+	.	Name=Cob_diameter;B73v2_pos=8:132566143;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136189237	136189336	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:132567054;1allele=C/A;version=Hapmap2;RS=rs278568674;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	136190187	136190286	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:132568004;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136297724	136297823	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:132673306;1allele=A/G;version=Hapmap2;RS=rs130873128;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136298125	136298224	.	+	.	Name=Days_to_silk;B73v2_pos=8:132673707;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136298125	136298224	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:132673707;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136322223	136322322	.	+	.	Name=Tassel_length;B73v2_pos=8:132697808;1allele=A/G;version=Hapmap2;RS=rs829078933;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136323378	136323477	.	+	.	Name=Ear_height;B73v2_pos=8:132698963;1allele=T/A;version=Hapmap2;RS=rs840887859;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	136324177	136324276	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:132699762;1allele=T/C;version=Hapmap2;RS=rs806225392;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	136324993	136325092	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:132700578;1allele=G/A;version=Hapmap2;RS=rs727320122;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	136325151	136325250	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:132700736;1allele=C/T;version=Hapmap2;RS=rs724484773;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136325219	136325317	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:132700804;1allele=T/G;version=Hapmap2;RS=rs724408983;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	136325622	136325721	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:132701208;1allele=T/C;version=Hapmap2;RS=rs130873184;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136375029	136375128	.	+	.	Name=Ear_height;B73v2_pos=8:132749428;1allele=A/G;version=Hapmap2;RS=rs1062152028;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136381640	136381739	.	+	.	Name=Days_to_silk;B73v2_pos=8:132756040;1allele=A/G;version=Hapmap2;RS=rs726189888;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136410556	136410654	.	+	.	Name=Cob_diameter;B73v2_pos=8:132784510;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	136416686	136416785	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:132790641;1allele=G/T;version=Hapmap2;RS=rs724165503;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	136430874	136430973	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:132804827;1allele=G/C;version=Hapmap2;RS=rs1063390171;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	136445767	136445866	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:132819916;1allele=T/C;version=Hapmap2;RS=rs803338230;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	136474862	136474961	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:132849104;1allele=G/A;version=Hapmap1;RS=rs132471450;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	136501762	136501861	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:132876005;1allele=A/G;version=Hapmap1;RS=rs816178821;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136506422	136506521	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:132880665;1allele=A/C;version=Hapmap2;RS=rs725776929;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	136518669	136518768	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:132892774;1allele=A/G;version=Hapmap2;RS=rs724872087;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136600843	136600942	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:132974958;1allele=A/G;version=Hapmap2;RS=rs278569067;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	136604782	136604881	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:132978897;1allele=A/T;version=Hapmap2;RS=rs1062940509;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	136803824	136803923	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:133177332;1allele=G/A;version=Hapmap2;RS=rs130873967;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	136809142	136809241	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:133182650;1allele=T/C;version=Hapmap2;RS=rs130873997;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	136809725	136809824	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:133183233;1allele=A/C;version=Hapmap2;RS=rs278569634;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	136809742	136809841	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:133183250;1allele=G/A;version=Hapmap2;RS=rs130874001;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	136809913	136810012	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:133183421;1allele=C/T;version=Hapmap2;RS=rs130874003;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136813272	136813371	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:133186780;1allele=A/T;version=Hapmap2;RS=rs130874038;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	136813272	136813371	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:133186780;1allele=A/T;version=Hapmap2;RS=rs130874038;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	136904745	136904844	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:133275400;1allele=G/C;version=Hapmap2;RS=rs278569712;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	136905548	136905647	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:133276203;1allele=G/T;version=Hapmap1;RS=rs132471763;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	136945177	136945276	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:133315708;1allele=C/T;version=Hapmap2;RS=rs842952633;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	136961121	136961220	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:133331652;1allele=T/G;version=Hapmap2;RS=rs845967482;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	136974293	136974392	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:133345133;1allele=T/C;version=Hapmap2;RS=rs816024987;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	137015804	137015903	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:133354908;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137019684	137019783	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:133351028;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137060107	137060206	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:133443547;1allele=G/A;version=Hapmap2;RS=rs810308256;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	137060411	137060510	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:133443851;1allele=A/G;version=Hapmap2;RS=rs130874389;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	137072440	137072539	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:133455878;1allele=C/T;version=Hapmap2;RS=rs848221946;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	137181715	137181814	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:133564775;1allele=C/T;version=Hapmap2;RS=rs278570006;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	137195708	137195807	.	+	.	Name=Leaf_length;B73v2_pos=8:133578926;1allele=T/A;version=Hapmap2;RS=rs849054507;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	137242456	137242555	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:133624254;1allele=T/C;version=Hapmap2;RS=rs834797934;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	137258135	137258234	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:133637465;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137305220	137305319	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:133685654;1allele=C/T;version=Hapmap2;RS=rs803661847;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	137513309	137513408	.	+	.	Name=Ear_height;B73v2_pos=8:133936430;1allele=C/T;version=Hapmap2;RS=rs815254224;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	137515438	137515537	.	+	.	Name=Ear_height;B73v2_pos=8:133938559;1allele=G/A;version=Hapmap2;RS=rs827855323;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	137523708	137523807	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:133946829;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137575455	137575554	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:133996716;1allele=T/C;version=Hapmap2;RS=rs811976484;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	137591995	137592094	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:134012685;1allele=T/C;version=Hapmap2;RS=rs132472310;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	137652703	137652802	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:134073119;1allele=C/T;version=Hapmap2;RS=rs724399261;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	137656884	137656983	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:134077300;1allele=/GACGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137656894	137656993	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:134077310;1allele=G/A;version=Hapmap2;RS=rs806017197;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	137657088	137657187	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:134077504;1allele=C/T;version=Hapmap2;RS=rs802247965;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	137659297	137659396	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:134079713;1allele=C/A;version=Hapmap2;RS=rs726121494;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	137675601	137675700	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:134098126;1allele=A/G;version=Hapmap2;RS=rs828270794;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	137689520	137689619	.	+	.	Name=Cob_diameter;B73v2_pos=8:134112045;1allele=A/C;version=Hapmap2;RS=rs724781612;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	137689892	137689991	.	+	.	Name=Cob_diameter;B73v2_pos=8:134112417;1allele=C/T;version=Hapmap2;RS=rs842646982;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	137689986	137690085	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:134112511;1allele=G/A;version=Hapmap2;RS=rs724420121;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	137690616	137690715	.	+	.	Name=Cob_diameter;B73v2_pos=8:134113141;1allele=G/A;version=Hapmap2;RS=rs724284891;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	137691188	137691287	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:134113713;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137691188	137691287	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:134113713;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137718494	137718593	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:134141435;1allele=T/G;version=Hapmap2;RS=rs816870613;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	137751560	137751659	.	+	.	Name=Leaf_length;B73v2_pos=8:134174896;1allele=A/C;version=Hapmap2;RS=rs835147654;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	137751560	137751659	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:134174896;1allele=A/C;version=Hapmap2;RS=rs835147654;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	137797857	137797956	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:134221366;1allele=G/C;version=Hapmap2;RS=rs278570619;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	137797857	137797956	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:134221366;1allele=G/C;version=Hapmap2;RS=rs278570619;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	137803003	137803102	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:134226514;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	137822396	137822495	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:134246106;1allele=T/C;version=Hapmap2;RS=rs802907018;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	138065302	138065401	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:134498590;1allele=G/T;version=Hapmap2;RS=rs839641749;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	138085064	138085163	.	+	.	Name=Leaf_length;B73v2_pos=8:134518351;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	138125575	138125674	.	+	.	Name=Leaf_length;B73v2_pos=8:134569185;1allele=A/G;version=Hapmap2;RS=rs278570920;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	138158746	138158845	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:134590141;1allele=T/C;version=Hapmap2;RS=rs805367148;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	138181913	138182012	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:134631250;1allele=C/T;version=Hapmap2;RS=rs811763359;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	138211511	138211610	.	+	.	Name=Leaf_length;B73v2_pos=8:134660507;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	138220376	138220475	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:134669372;1allele=C/T;version=Hapmap2;RS=rs844215393;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	138244892	138244991	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:134693767;1allele=T/C;version=Hapmap2;RS=rs1061885786;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	138373044	138373143	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:134785272;1allele=G/A;version=Hapmap2;RS=rs844103984;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	138373044	138373143	.	+	.	Name=Ear_height;B73v2_pos=8:134785272;1allele=G/A;version=Hapmap2;RS=rs844103984;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	138631324	138631423	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:135049838;1allele=T/G;version=Hapmap2;RS=rs1061978889;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	138664714	138664813	.	+	.	Name=Ear_height;B73v2_pos=8:135083231;1allele=G/A;version=Hapmap1;RS=rs130876385;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	138897868	138897967	.	+	.	Name=Ear_height;B73v2_pos=8:135322387;1allele=T/C;version=Hapmap2;RS=rs832711011;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	138897932	138898031	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:135322451;1allele=A/T;version=Hapmap2;RS=rs847564752;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	138922376	138922475	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:135346901;1allele=A/G;version=Hapmap2;RS=rs1064089370;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	138931949	138932048	.	+	.	Name=Days_to_silk;B73v2_pos=8:135356474;1allele=A/G;version=Hapmap2;RS=rs810726457;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	138987874	138987973	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:135412406;1allele=G/T;version=Hapmap2;RS=rs726783371;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	138989875	138989974	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:135414408;1allele=T/C;version=Hapmap2;RS=rs813043925;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	138990087	138990186	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:135414620;1allele=A/G;version=Hapmap2;RS=rs844955185;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	138995946	138996045	.	+	.	Name=Leaf_length;B73v2_pos=8:135420479;1allele=G/A;version=Hapmap2;RS=rs838998902;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	138995946	138996045	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:135420479;1allele=G/A;version=Hapmap2;RS=rs838998902;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	139018148	139018247	.	+	.	Name=Days_to_silk;B73v2_pos=8:135442003;1allele=G/A;version=Hapmap2;RS=rs820870607;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	139034171	139034270	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:135457324;1allele=A/T;version=Hapmap1;RS=rs132473276;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	139094405	139094504	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:135519523;1allele=G/A;version=Hapmap2;RS=rs130876856;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	139094405	139094504	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:135519523;1allele=G/A;version=Hapmap2;RS=rs130876856;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	139124116	139124215	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:135549271;1allele=C/G;version=Hapmap2;RS=rs803057062;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	139230442	139230541	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:135655155;1allele=A/G;version=Hapmap1;RS=rs132473360;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	139245279	139245378	.	+	.	Name=Leaf_length;B73v2_pos=8:135669992;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	139310376	139310475	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:135728612;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	139310376	139310475	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:135728612;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	139461367	139461466	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:135869563;1allele=T/C;version=Hapmap2;RS=rs834950073;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	139631089	139631188	.	+	.	Name=Ear_height;B73v2_pos=8:136040926;1allele=/GG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	139649328	139649427	.	+	.	Name=Ear_height;B73v2_pos=8:136086593;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	139890539	139890638	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:136302573;1allele=T/C;version=Hapmap2;RS=rs831683691;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	139969813	139969912	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:136352709;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	139996931	139997030	.	+	.	Name=Days_to_silk;B73v2_pos=8:136383805;1allele=T/C;version=Hapmap2;RS=rs806677981;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	139998976	139999075	.	+	.	Name=Leaf_length;B73v2_pos=8:136385852;1allele=C/T;version=Hapmap2;RS=rs726876564;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	139998976	139999075	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:136385852;1allele=C/T;version=Hapmap2;RS=rs726876564;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	140002573	140002672	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:136400543;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	140004072	140004171	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:136399044;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	140006409	140006508	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:136396707;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	140087246	140087345	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:136478766;1allele=G/C;version=Hapmap2;RS=rs1060775857;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	140093558	140093657	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:136485077;1allele=C/T;version=Hapmap2;RS=rs828340355;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	140363538	140363637	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:136750668;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	140398327	140398426	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:136785580;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	140492978	140493077	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:136871553;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	140530289	140530388	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:136911310;1allele=T/C;version=Hapmap2;RS=rs130879045;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	140530357	140530456	.	+	.	Name=Ear_height;B73v2_pos=8:136911378;1allele=C/T;version=Hapmap2;RS=rs130879049;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	140637136	140637235	.	+	.	Name=Leaf_length;B73v2_pos=8:137017233;1allele=A/G;version=Hapmap2;RS=rs726151649;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	140964387	140964486	.	+	.	Name=Leaf_length;B73v2_pos=8:137410128;1allele=T/A;version=Hapmap2;RS=rs822132414;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	140986657	140986756	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:137299677;1allele=A/G;version=Hapmap2;RS=rs278576954;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	141020712	141020811	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:137333448;1allele=G/A;version=Hapmap2;RS=rs833360249;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	141052515	141052614	.	+	.	Name=Ear_height;B73v2_pos=8:137283498;1allele=C/T;version=Hapmap2;RS=rs130880437;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141089840	141089939	.	+	.	Name=Ear_height;B73v2_pos=8:137461675;1allele=T/C;version=Hapmap2;RS=rs278577452;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141094460	141094559	.	+	.	Name=Plant_height;B73v2_pos=8:137466295;1allele=A/G;version=Hapmap2;RS=rs130880854;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	141108119	141108218	.	+	.	Name=Leaf_length;B73v2_pos=8:137479955;1allele=T/C;version=Hapmap2;RS=rs278577530;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	141108618	141108717	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:137480454;1allele=A/C;version=Hapmap2;RS=rs278577540;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	141154533	141154632	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:137526369;1allele=C/T;version=Hapmap2;RS=rs726098605;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	141180928	141181027	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:137552258;1allele=G/A;version=Hapmap2;RS=rs840679978;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	141192918	141193017	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:137563144;1allele=G/A;version=Hapmap2;RS=rs833827467;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	141227471	141227570	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:137597666;1allele=C/T;version=Hapmap2;RS=rs278577878;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141257694	141257793	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:137627422;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	141263399	141263498	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:137633127;1allele=T/C;version=Hapmap2;RS=rs130881299;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	141266255	141266354	.	+	.	Name=Leaf_length;B73v2_pos=8:137635983;1allele=T/C;version=Hapmap2;RS=rs807389449;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	141274075	141274174	.	+	.	Name=Leaf_length;B73v2_pos=8:137644175;1allele=C/A;version=Hapmap1;RS=rs132474748;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141357503	141357602	.	+	.	Name=Leaf_length;B73v2_pos=8:137728249;1allele=G/A;version=Hapmap2;RS=rs812824719;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	141391197	141391296	.	+	.	Name=Leaf_length;B73v2_pos=8:137761941;1allele=A/G;version=Hapmap1;RS=rs132474804;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	141393215	141393314	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:137763960;1allele=T/C;version=Hapmap2;RS=rs130881549;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	141397508	141397607	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:137768253;1allele=A/G;version=Hapmap1;RS=rs130881575;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	141710069	141710168	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:138068657;1allele=G/A;version=Hapmap2;RS=rs838914670;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	141732339	141732438	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:138090930;1allele=C/T;version=Hapmap2;RS=rs839907872;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141779981	141780080	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:138138578;1allele=A/G;version=Hapmap2;RS=rs278578556;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	141783977	141784076	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:138142575;1allele=A/G;version=Hapmap2;RS=rs828613534;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	141823100	141823199	.	+	.	Name=Leaf_length;B73v2_pos=8:138185982;1allele=G/A;version=Hapmap2;RS=rs849760384;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	141823981	141824080	.	+	.	Name=Tassel_length;B73v2_pos=8:138186863;1allele=A/G;version=Hapmap2;RS=rs820916800;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	141824640	141824739	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:138187522;1allele=C/T;version=Hapmap2;RS=rs841558904;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141825010	141825109	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:138187892;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	141856038	141856137	.	+	.	Name=Ear_height;B73v2_pos=8:138221866;1allele=T/C;version=Hapmap2;RS=rs130881944;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141888849	141888948	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:138249753;1allele=C/T;version=Hapmap2;RS=rs130882066;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	141904675	141904774	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:138261043;1allele=C/T;version=Hapmap2;RS=rs828168406;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141941570	141941669	.	+	.	Name=Ear_height;B73v2_pos=8:138298098;1allele=C/T;version=Hapmap2;RS=rs830435467;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	141947843	141947942	.	+	.	Name=Ear_height;B73v2_pos=8:138304371;1allele=C/A;version=Hapmap2;RS=rs808854745;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	141951844	141951943	.	+	.	Name=Leaf_length;B73v2_pos=8:138308372;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	141970189	141970288	.	+	.	Name=Ear_height;B73v2_pos=8:138326717;1allele=T/C;version=Hapmap2;RS=rs278578939;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	141990501	141990600	.	+	.	Name=Ear_height;B73v2_pos=8:138343031;1allele=T/A;version=Hapmap2;RS=rs278578949;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	142030733	142030832	.	+	.	Name=Ear_height;B73v2_pos=8:138383270;1allele=G/A;version=Hapmap2;RS=rs1064725016;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	142116797	142116896	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:138466734;1allele=T/C;version=Hapmap2;RS=rs829754198;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	142159692	142159791	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:138509724;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	142160407	142160506	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:138510439;1allele=C/T;version=Hapmap2;RS=rs839249139;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	142218752	142218851	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:138563806;1allele=A/G;version=Hapmap2;RS=rs811210932;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	142226747	142226846	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:77115390;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	142298190	142298289	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:138643617;1allele=C/G;version=Hapmap2;RS=rs813225213;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142301678	142301777	.	+	.	Name=Leaf_length;B73v2_pos=8:138647091;1allele=C/T;version=Hapmap2;RS=rs825733901;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142302410	142302509	.	+	.	Name=Cob_diameter;B73v2_pos=8:138647823;1allele=C/T;version=Hapmap1;RS=rs132475378;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142306844	142306943	.	+	.	Name=Cob_diameter;B73v2_pos=8:138652257;1allele=A/G;version=Hapmap2;RS=rs132475431;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	142310638	142310737	.	+	.	Name=Leaf_length;B73v2_pos=8:138656051;1allele=G/A;version=Hapmap2;RS=rs805974042;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	142315354	142315453	.	+	.	Name=Ear_height;B73v2_pos=8:138660767;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	142329542	142329641	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:138674955;1allele=C/T;version=Hapmap2;RS=rs834189265;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142366455	142366554	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:138713253;1allele=A/G;version=Hapmap2;RS=rs1062038118;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	142374707	142374806	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:138721505;1allele=C/T;version=Hapmap2;RS=rs1061461448;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	142585419	142585518	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:138880610;1allele=C/T;version=Hapmap2;RS=rs808465900;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142585854	142585953	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:138881045;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	142591463	142591562	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:138886654;1allele=C/T;version=Hapmap2;RS=rs278580314;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142815814	142815913	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139105125;1allele=C/T;version=Hapmap2;RS=rs278580545;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142832539	142832638	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139121852;1allele=T/A;version=Hapmap2;RS=rs130883045;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	142832610	142832709	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139121923;1allele=C/A;version=Hapmap2;RS=rs827552517;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	142833575	142833674	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139122888;1allele=T/C;version=Hapmap1;RS=rs132476041;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	142864742	142864841	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139154058;1allele=C/T;version=Hapmap2;RS=rs808579531;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	142946189	142946288	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139236866;1allele=C/T;version=Hapmap2;RS=rs727392699;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	142966721	142966820	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:139257402;1allele=C/T;version=Hapmap2;RS=rs1061971883;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	142967969	142968068	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139258650;1allele=C/T;version=Hapmap2;RS=rs1064357365;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	143007385	143007484	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139298071;1allele=T/A;version=Hapmap2;RS=rs130883340;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	143007929	143008028	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:139298615;1allele=C/T;version=Hapmap1;RS=rs130883344;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	143047313	143047412	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:139338977;1allele=C/T;version=Hapmap2;RS=rs278580681;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	143084373	143084472	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:139376257;1allele=T/C;version=Hapmap2;RS=rs826285046;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	143162502	143162601	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:139535493;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	143381845	143381944	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:139632652;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	143566790	143566889	.	+	.	Name=Tassel_length;B73v2_pos=8:139757388;1allele=T/C;version=Hapmap2;RS=rs838363426;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	143911040	143911139	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:140164809;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	143919613	143919712	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:140173382;1allele=T/C;version=Hapmap2;RS=rs821199692;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	143981079	143981178	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:140237418;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	144130627	144130726	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:140373036;1allele=T/C;version=Hapmap2;RS=rs1063056499;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	144136481	144136580	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:140378890;1allele=G/A;version=Hapmap2;RS=rs847557665;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	144413716	144413815	.	+	.	Name=Leaf_length;B73v2_pos=8:140610419;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	144413716	144413815	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:140610419;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	144464147	144464246	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:140709252;1allele=C/A;version=Hapmap2;RS=rs1063273128;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	144502441	144502540	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:140748681;1allele=C/T;version=Hapmap2;RS=rs818727275;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	144691947	144692046	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:140987074;1allele=A/G;version=Hapmap2;RS=rs130885460;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	144697800	144697899	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:141063805;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	144718114	144718213	.	+	.	Name=Nitrate;B73v2_pos=8:141002468;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	144786108	144786207	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:141079813;1allele=A/G;version=Hapmap2;RS=rs130885533;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	144786421	144786520	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:141080126;1allele=C/T;version=Hapmap2;RS=rs842925969;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	144788407	144788506	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:141082113;1allele=G/A;version=Hapmap2;RS=rs841453433;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	144788632	144788731	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:141082338;1allele=C/T;version=Hapmap2;RS=rs836070665;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	144809511	144809610	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:141103219;1allele=C/T;version=Hapmap2;RS=rs132477429;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	145027601	145027700	.	+	.	Name=Height_above_ear;B73v2_pos=8:141315593;1allele=G/T;version=Hapmap2;RS=rs278584109;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	145063983	145064082	.	+	.	Name=Tassel_length;B73v2_pos=8:141351825;1allele=G/A;version=Hapmap2;RS=rs805433040;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	145095201	145095300	.	+	.	Name=Tassel_length;B73v2_pos=8:141382749;1allele=T/C;version=Hapmap2;RS=rs804885859;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	145505160	145505259	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:141803661;1allele=A/G;version=Hapmap1;RS=rs132477927;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	145505748	145505847	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:141804249;1allele=A/T;version=Hapmap1;RS=rs130886224;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	145619644	145619743	.	+	.	Name=Height_above_ear;B73v2_pos=8:141912426;1allele=G/A;version=Hapmap2;RS=rs132477999;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	145654062	145654161	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:141947946;1allele=C/A;version=Hapmap1;RS=rs132478057;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	145654550	145654649	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:141948434;1allele=T/G;version=Hapmap1;RS=rs130886574;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	145714075	145714174	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:142003807;1allele=G/A;version=Hapmap2;RS=rs844687938;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	145837281	145837380	.	+	.	Name=Ear_height;B73v2_pos=8:142137379;1allele=C/T;version=Hapmap2;RS=rs822530029;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	145837320	145837419	.	+	.	Name=Ear_height;B73v2_pos=8:142137418;1allele=G/A;version=Hapmap2;RS=rs847998578;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	145838203	145838302	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:142138301;1allele=A/G;version=Hapmap2;RS=rs808724530;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	145843111	145843210	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:142143209;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	145934543	145934642	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:142225737;1allele=C/T;version=Hapmap1;RS=rs132478363;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	145945766	145945865	.	+	.	Name=Days_to_silk;B73v2_pos=8:142236962;1allele=A/G;version=Hapmap1;RS=rs132478543;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	146022514	146022613	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:142301258;1allele=T/C;version=Hapmap2;RS=rs841964361;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	146065107	146065206	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:142357010;1allele=G/T;version=Hapmap2;RS=rs130887546;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	146076665	146076764	.	+	.	Name=Leaf_length;B73v2_pos=8:142368568;1allele=T/A;version=Hapmap2;RS=rs130887619;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	146145497	146145596	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:142428819;1allele=T/C;version=Hapmap2;RS=rs278586681;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	146190705	146190804	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:142471977;1allele=A/C;version=Hapmap2;RS=rs816993469;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	146219384	146219483	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:142500659;1allele=G/C;version=Hapmap2;RS=rs278586915;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	146584892	146584991	.	+	.	Name=Ear_height;B73v2_pos=8:142840746;1allele=CT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	146595053	146595152	.	+	.	Name=Leaf_length;B73v2_pos=8:142830584;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	146845664	146845763	.	+	.	Name=Height_above_ear;B73v2_pos=8:143120857;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	147024195	147024294	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:143243006;1allele=C/A;version=Hapmap2;RS=rs828083865;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	147035396	147035495	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:143254208;1allele=G/A;version=Hapmap2;RS=rs805038120;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	147042020	147042119	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:143260833;1allele=G/A;version=Hapmap2;RS=rs727171840;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	147057494	147057593	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:143276312;1allele=C/T;version=Hapmap2;RS=rs845141770;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	147060112	147060211	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:143278930;1allele=C/T;version=Hapmap2;RS=rs845919646;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	147094906	147095005	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:143312956;1allele=A/T;version=Hapmap2;RS=rs822867029;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	147820571	147820670	.	+	.	Name=Leaf_length;B73v2_pos=8:144065292;1allele=A/C;version=Hapmap2;RS=rs278589011;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	147862039	147862138	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:144106865;1allele=A/G;version=Hapmap2;RS=rs810538578;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	148071359	148071458	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:144323045;1allele=A/T;version=Hapmap2;RS=rs839945800;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	148200062	148200161	.	+	.	Name=Days_to_silk;B73v2_pos=8:144451171;1allele=C/T;version=Hapmap2;RS=rs841426605;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	148207607	148207706	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:144458856;1allele=C/G;version=Hapmap1;RS=rs132480011;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	148221409	148221508	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:144492786;1allele=T/C;version=Hapmap2;RS=rs846512520;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	148285235	148285334	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:144545680;1allele=G/A;version=Hapmap2;RS=rs278589717;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	148302171	148302270	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:144562616;1allele=C/T;version=Hapmap2;RS=rs726835357;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	148313768	148313867	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:144574215;1allele=A/G;version=Hapmap2;RS=rs823315278;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	148419038	148419137	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:144679775;1allele=G/A;version=Hapmap2;RS=rs810528907;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	148467192	148467291	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:144725394;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	148552894	148552993	.	+	.	Name=Leaf_length;B73v2_pos=8:144810039;1allele=G/A;version=Hapmap2;RS=rs825333137;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	148598242	148598341	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:5534035;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	148939786	148939885	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:145139613;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	148992237	148992336	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145192029;1allele=G/A;version=Hapmap2;RS=rs132480604;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	148999005	148999104	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:145198794;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	149027964	149028063	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:145229984;1allele=T/C;version=Hapmap2;RS=rs843410290;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	149081322	149081421	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:145277763;1allele=A/G;version=Hapmap2;RS=rs818781674;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	149097750	149097849	.	+	.	Name=Leaf_length;B73v2_pos=8:145294328;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	149154164	149154263	.	+	.	Name=Starch;B73v2_pos=8:145350898;1allele=G/A;version=Hapmap2;RS=rs824043314;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	149176789	149176888	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145375690;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	149222859	149222958	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145396611;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	149268591	149268690	.	+	.	Name=Tassel_length;B73v2_pos=8:145462065;1allele=G/C;version=Hapmap1;RS=rs807708459;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	149270610	149270709	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:145464084;1allele=G/C;version=Hapmap2;RS=rs823961392;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	149270711	149270810	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:145464185;1allele=T/C;version=Hapmap2;RS=rs278591121;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	149280723	149280822	.	+	.	Name=Leaf_length;B73v2_pos=8:145474195;1allele=T/C;version=Hapmap2;RS=rs835285678;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	149302192	149302291	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145496027;1allele=C/T;version=Hapmap2;RS=rs828360603;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	149333478	149333577	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145526760;1allele=C/T;version=Hapmap2;RS=rs130892455;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	149333889	149333988	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145527171;1allele=A/T;version=Hapmap1;RS=rs725938814;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	149358682	149358781	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:145551964;1allele=G/A;version=Hapmap2;RS=rs835252348;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	149395285	149395384	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145590934;1allele=C/T;version=Hapmap2;RS=rs725447254;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	149414820	149414919	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:145610457;1allele=T/A;version=Hapmap2;RS=rs278591471;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	149430104	149430203	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145625741;1allele=C/T;version=Hapmap2;RS=rs725317873;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	149482734	149482833	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145697484;1allele=T/C;version=Hapmap2;RS=rs801892697;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	149485247	149485346	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145699997;1allele=G/C;version=Hapmap1;RS=rs132481254;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	149627273	149627372	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145783249;1allele=C/T;version=Hapmap2;RS=rs828361134;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	149627279	149627378	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:145783255;1allele=G/A;version=Hapmap2;RS=rs820645389;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	149642303	149642402	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:145798280;1allele=T/C;version=Hapmap2;RS=rs801472415;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	149643407	149643506	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:145799384;1allele=C/A;version=Hapmap2;RS=rs278592008;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	149681895	149681994	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:145838217;1allele=C/T;version=Hapmap2;RS=rs845603649;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	149682052	149682151	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:145838374;1allele=G/A;version=Hapmap2;RS=rs1062208738;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	149682489	149682588	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145838811;1allele=T/A;version=Hapmap2;RS=rs823613870;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	149694875	149694974	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:145851196;1allele=A/G;version=Hapmap2;RS=rs830463371;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	149885290	149885389	.	+	.	Name=Days_to_silk;B73v2_pos=8:146060083;1allele=/GGGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	149889043	149889142	.	+	.	Name=Tassel_length;B73v2_pos=8:146063836;1allele=C/T;version=Hapmap2;RS=rs830294687;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	149895260	149895359	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:146070053;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	149896029	149896128	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:146070822;1allele=T/C;version=Hapmap2;RS=rs814490089;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	149938284	149938383	.	+	.	Name=Starch;B73v2_pos=8:146114039;1allele=G/C;version=Hapmap2;RS=rs840040886;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	149956983	149957082	.	+	.	Name=Starch;B73v2_pos=8:146132737;1allele=T/A;version=Hapmap2;RS=rs803914274;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	149972483	149972582	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:146149255;1allele=C/G;version=Hapmap1;RS=rs132482057;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	150011058	150011157	.	+	.	Name=Starch;B73v2_pos=8:146189886;1allele=T/A;version=Hapmap2;RS=rs822379724;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	150307451	150307550	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:146477469;1allele=G/A;version=Hapmap2;RS=rs130893777;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	150316943	150317042	.	+	.	Name=Leaf_length;B73v2_pos=8:146486963;1allele=C/T;version=Hapmap2;RS=rs825740956;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	150375084	150375183	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:146545919;1allele=A/G;version=Hapmap2;RS=rs1061129868;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	150432068	150432167	.	+	.	Name=Starch;B73v2_pos=8:146601475;1allele=T/C;version=Hapmap2;RS=rs814491723;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	150434500	150434599	.	+	.	Name=Tassel_length;B73v2_pos=8:146603907;1allele=C/T;version=Hapmap2;RS=rs132482538;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	150719305	150719404	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:146890756;1allele=C/T;version=Hapmap2;RS=rs727168062;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	150930327	150930426	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:147115257;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	151160010	151160109	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:147319674;1allele=A/G;version=Hapmap2;RS=rs826322185;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	151221675	151221774	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:147381719;1allele=G/A;version=Hapmap2;RS=rs846151719;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	151331647	151331746	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:147498548;1allele=G/C;version=Hapmap2;RS=rs726259578;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	151350725	151350824	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:147523873;1allele=T/C;version=Hapmap2;RS=rs833214151;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	151352359	151352458	.	+	.	Name=Tassel_length;B73v2_pos=8:147525507;1allele=C/T;version=Hapmap2;RS=rs822700221;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	151591506	151591605	.	+	.	Name=Plant_height;B73v2_pos=8:147755731;1allele=A/G;version=Hapmap2;RS=rs816210382;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	151973376	151973475	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:148158613;1allele=A/T;version=Hapmap2;RS=rs810392097;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	152130625	152130724	.	+	.	Name=Cob_diameter;B73v2_pos=8:148277336;1allele=C/T;version=Hapmap2;RS=rs130895599;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	152347944	152348043	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:148488565;1allele=A/G;version=Hapmap2;RS=rs838460074;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	152514787	152514886	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:148642352;1allele=A/C;version=Hapmap2;RS=rs843090291;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	152518575	152518674	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:148646140;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	152576781	152576880	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:148677184;1allele=A/C;version=Hapmap1;RS=rs132484296;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	152580816	152580915	.	+	.	Name=Days_to_silk;B73v2_pos=8:148681219;1allele=T/A;version=Hapmap2;RS=rs819858803;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	152580973	152581072	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:148681376;1allele=T/C;version=Hapmap2;RS=rs811502339;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	152582841	152582940	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:148683246;1allele=A/G;version=Hapmap2;RS=rs811370398;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	152620901	152621000	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:148730012;1allele=G/A;version=Hapmap2;RS=rs823826987;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	152682195	152682294	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:148789917;1allele=C/T;version=Hapmap2;RS=rs821585044;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	152687211	152687310	.	+	.	Name=Days_to_silk;B73v2_pos=8:148794933;1allele=A/G;version=Hapmap2;RS=rs130896612;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	152691168	152691267	.	+	.	Name=Days_to_silk;B73v2_pos=8:148890092;1allele=G/A;version=Hapmap2;RS=rs816146968;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	152852265	152852364	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:148959889;1allele=T/C;version=Hapmap1;RS=rs132484618;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	152936634	152936733	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:149043271;1allele=G/T;version=Hapmap2;RS=rs824484304;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	152939679	152939778	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:149045193;1allele=C/A;version=Hapmap1;RS=rs132484535;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	152972014	152972113	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:149074457;1allele=G/A;version=Hapmap2;RS=rs831271373;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	152974450	152974549	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:149076893;1allele=T/A;version=Hapmap2;RS=rs809474944;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	152976022	152976121	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:149078465;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	152976231	152976330	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:149078674;1allele=/CA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	152978659	152978758	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:149081102;1allele=G/A;version=Hapmap1;RS=rs869560799;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	152980251	152980350	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:149082693;1allele=A/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153032358	153032457	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:149127040;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153032720	153032819	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:149127402;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153051627	153051726	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:149146309;1allele=G/A;version=Hapmap2;RS=rs828245920;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	153065235	153065334	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:149160219;1allele=C/T;version=Hapmap2;RS=rs834756246;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	153162632	153162731	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:149257527;1allele=A/G;version=Hapmap2;RS=rs817716884;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	153164444	153164543	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:149259339;1allele=A/G;version=Hapmap2;RS=rs825125930;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	153164536	153164635	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:149259431;1allele=G/A;version=Hapmap2;RS=rs132484940;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	153166456	153166555	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:149261351;1allele=C/T;version=Hapmap2;RS=rs804697895;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	153166799	153166898	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:149261694;1allele=G/T;version=Hapmap2;RS=rs1061225386;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	153167373	153167472	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:149262268;1allele=T/C;version=Hapmap2;RS=rs1063025705;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	153331181	153331280	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:149420953;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153374468	153374567	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:149464240;1allele=T/C;version=Hapmap2;RS=rs810659052;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	153437664	153437763	.	+	.	Name=Plant_height;B73v2_pos=5:187681253;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153437664	153437763	.	+	.	Name=Ear_height;B73v2_pos=5:187681253;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153437664	153437763	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=5:187681253;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153437664	153437763	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=5:187681253;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153515820	153515919	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:149615734;1allele=C/T;version=Hapmap2;RS=rs278596017;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	153651216	153651315	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:149723971;1allele=T/G;version=Hapmap2;RS=rs1062692781;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	153677902	153678001	.	+	.	Name=Cob_diameter;B73v2_pos=8:149750658;1allele=G/A;version=Hapmap2;RS=rs825653349;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	153709586	153709685	.	+	.	Name=Cob_diameter;B73v2_pos=8:149776427;1allele=T/C;version=Hapmap2;RS=rs1062599320;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	153715976	153716075	.	+	.	Name=Days_to_silk;B73v2_pos=8:149782817;1allele=T/C;version=Hapmap2;RS=rs130898174;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	153764403	153764502	.	+	.	Name=Ear_height;B73v2_pos=2:60446727;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	153790746	153790845	.	+	.	Name=Ear_height;B73v2_pos=8:149860952;1allele=C/T;version=Hapmap2;RS=rs811213870;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	153969290	153969389	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150029226;1allele=A/G;version=Hapmap2;RS=rs130898886;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	153972932	153973031	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150032868;1allele=A/G;version=Hapmap2;RS=rs130898946;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	154080672	154080771	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150150937;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154148000	154148099	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150210092;1allele=A/G;version=Hapmap2;RS=rs840666580;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	154185697	154185796	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:150247006;1allele=G/T;version=Hapmap2;RS=rs130899537;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	154211486	154211585	.	+	.	Name=Ear_height;B73v2_pos=8:150272794;1allele=A/G;version=Hapmap2;RS=rs836304733;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	154220188	154220287	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:150281446;1allele=-/+;version=Hapmap2;RS=rs804844308;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	154423568	154423667	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150488101;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154567378	154567477	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150632272;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154578114	154578213	.	+	.	Name=Cob_diameter;B73v2_pos=8:150642355;1allele=A/T;version=Hapmap2;RS=rs835726375;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	154602278	154602377	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:150667959;1allele=C/T;version=Hapmap1;RS=rs132486313;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	154675329	154675428	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150741134;1allele=A/G;version=Hapmap2;RS=rs809614438;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	154705832	154705931	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150773527;1allele=G/A;version=Hapmap2;RS=rs847579245;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	154736509	154736608	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150802061;1allele=T/C;version=Hapmap2;RS=rs278597581;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	154777674	154777773	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150843169;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154805530	154805629	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:150871676;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154805791	154805890	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150871937;1allele=T/C;version=Hapmap2;RS=rs805800343;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	154829945	154830044	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150896318;1allele=G/A;version=Hapmap2;RS=rs1063633031;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	154841488	154841587	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150906366;1allele=G/A;version=Hapmap1;RS=rs132486512;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	154841634	154841733	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150906512;1allele=C/A;version=Hapmap2;RS=rs132486502;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	154842282	154842381	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150907160;1allele=T/A;version=Hapmap2;RS=rs132486471;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	154842648	154842747	.	+	.	Name=Ear_height;B73v2_pos=8:150907526;1allele=T/C;version=Hapmap1;RS=rs130900808;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	154843127	154843226	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150908005;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154844204	154844303	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:150909082;1allele=G/A;version=Hapmap2;RS=rs843939548;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	154844894	154844993	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150909772;1allele=+/-;version=Hapmap2;RS=rs805425754;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	154844895	154844994	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150909773;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154858786	154858885	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150923352;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	154899672	154899771	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:150962495;1allele=C/T;version=Hapmap2;RS=rs804184157;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	155027600	155027699	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:151092003;1allele=G/A;version=Hapmap2;RS=rs834364032;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	155129786	155129885	.	+	.	Name=Days_to_silk;B73v2_pos=8:151193889;1allele=G/C;version=Hapmap1;RS=rs132486804;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	155130840	155130939	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:151194943;1allele=C/G;version=Hapmap2;RS=rs727437977;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	155152242	155152341	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:151216341;1allele=G/C;version=Hapmap1;RS=rs132486858;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	155152597	155152696	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:151216696;1allele=A/G;version=Hapmap2;RS=rs132486868;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	155254575	155254674	.	+	.	Name=Tassel_length;B73v2_pos=8:151309437;1allele=A/G;version=Hapmap2;RS=rs726446224;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	155282207	155282306	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:151337069;1allele=T/C;version=Hapmap2;RS=rs807677759;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	155282291	155282390	.	+	.	Name=Days_to_silk;B73v2_pos=8:151337153;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	155285728	155285827	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:151340590;1allele=G/C;version=Hapmap2;RS=rs812908692;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	155543868	155543967	.	+	.	Name=Days_to_silk;B73v2_pos=8:151607604;1allele=C/T;version=Hapmap2;RS=rs130901554;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	155620302	155620401	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:151634862;1allele=C/T;version=Hapmap2;RS=rs278598364;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	155631082	155631180	.	+	.	Name=Tassel_length;B73v2_pos=8:151690481;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	155848857	155848956	.	+	.	Name=Days_to_silk;B73v2_pos=8:151914525;1allele=T/G;version=Hapmap1;RS=rs823417510;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	156054398	156054497	.	+	.	Name=Nitrate;B73v2_pos=8:152110994;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	156079897	156079996	.	+	.	Name=Days_to_silk;B73v2_pos=8:152134173;1allele=T/C;version=Hapmap2;RS=rs130902612;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	156090743	156090842	.	+	.	Name=Nitrate;B73v2_pos=8:152145019;1allele=C/G;version=Hapmap1;RS=rs132488055;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	156207931	156208030	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:152255705;1allele=A/G;version=Hapmap2;RS=rs846662103;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	156262495	156262594	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:152308845;1allele=G/A;version=Hapmap2;RS=rs807471540;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	156273192	156273291	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:152319542;1allele=C/A;version=Hapmap2;RS=rs825924268;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	156502384	156502483	.	+	.	Name=Days_to_silk;B73v2_pos=8:152538123;1allele=T/G;version=Hapmap2;RS=rs130903118;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	156505523	156505622	.	+	.	Name=Days_to_silk;B73v2_pos=8:152541262;1allele=G/A;version=Hapmap1;RS=rs130903126;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	156506344	156506443	.	+	.	Name=Days_to_silk;B73v2_pos=8:152542083;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	156597115	156597214	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:152634790;1allele=A/G;version=Hapmap2;RS=rs812891176;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	156635367	156635466	.	+	.	Name=Starch;B73v2_pos=8:152673184;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	156709631	156709730	.	+	.	Name=Days_to_silk;B73v2_pos=8:152776638;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	156813213	156813312	.	+	.	Name=Days_to_silk;B73v2_pos=8:152848452;1allele=A/G;version=Hapmap2;RS=rs1060604499;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	156847267	156847366	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:77888676;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	156860278	156860377	.	+	.	Name=Nitrate;B73v2_pos=8:152895525;1allele=A/G;version=Hapmap2;RS=rs819156696;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	156920626	156920725	.	+	.	Name=Days_to_silk;B73v2_pos=8:152953674;1allele=A/C;version=Hapmap2;RS=rs132489009;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	156983596	156983695	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:153016458;1allele=G/C;version=Hapmap2;RS=rs132489370;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	156986131	156986230	.	+	.	Name=Nitrate;B73v2_pos=8:153018993;1allele=T/G;version=Hapmap2;RS=rs812671759;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	157030916	157031015	.	+	.	Name=Nitrate;B73v2_pos=8:153077731;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	157281052	157281151	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:153283574;1allele=C/T;version=Hapmap2;RS=rs278600410;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	157502922	157503021	.	+	.	Name=Days_to_silk;B73v2_pos=8:153509189;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	157725495	157725594	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:153728501;1allele=T/A;version=Hapmap2;RS=rs278600816;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	157733700	157733799	.	+	.	Name=Nitrate;B73v2_pos=8:153680717;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	157838438	157838537	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:164319977;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	157852407	157852506	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:153832650;1allele=A/G;version=Hapmap2;RS=rs805477539;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	158552707	158552806	.	+	.	Name=Cob_diameter;B73v2_pos=8:154509139;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	158931479	158931578	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:154878028;1allele=G/T;version=Hapmap2;RS=rs838136101;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	159100459	159100558	.	+	.	Name=Days_to_silk;B73v2_pos=8:155052886;1allele=T/G;version=Hapmap2;RS=rs1061810126;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	159140402	159140501	.	+	.	Name=Cob_diameter;B73v2_pos=8:155080620;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159140404	159140503	.	+	.	Name=Cob_diameter;B73v2_pos=8:155080622;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159143008	159143107	.	+	.	Name=Days_to_silk;B73v2_pos=8:155083226;1allele=G/A;version=Hapmap2;RS=rs1062091269;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	159207073	159207172	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155161379;1allele=T/G;version=Hapmap2;RS=rs818469942;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	159229553	159229652	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155183865;1allele=C/T;version=Hapmap2;RS=rs829550157;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	159332601	159332700	.	+	.	Name=Days_to_silk;B73v2_pos=8:155243380;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159417388	159417487	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155351510;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159430450	159430549	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155364396;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159492568	159492667	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155461336;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159495145	159495244	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155463913;1allele=T/G;version=Hapmap2;RS=rs807672910;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	159516222	159516321	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155482176;1allele=A/G;version=Hapmap1;RS=rs132491148;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	159623368	159623467	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155588835;1allele=-/+;version=Hapmap2;RS=rs829171807;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	159671300	159671399	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:155635644;1allele=C/T;version=Hapmap2;RS=rs838574740;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	159684754	159684853	.	+	.	Name=Nitrate;B73v2_pos=8:155649098;1allele=A/G;version=Hapmap2;RS=rs846204472;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	159698108	159698207	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155662452;1allele=A/G;version=Hapmap2;RS=rs844353991;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	159706711	159706810	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155711403;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159707183	159707282	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155710931;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159708170	159708269	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155709944;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159717718	159717817	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155700396;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159730301	159730400	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155687814;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159744588	159744687	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155673518;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159747193	159747292	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155670913;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159759185	159759284	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155723587;1allele=C/T;version=Hapmap2;RS=rs806266782;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	159815380	159815479	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155779507;1allele=G/A;version=Hapmap2;RS=rs832254902;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	159919844	159919943	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:155905648;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	159936305	159936404	.	+	.	Name=Tassel_length;B73v2_pos=1:275106237;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	160042970	160043069	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:156029252;1allele=C/T;version=Hapmap2;RS=rs837788424;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	160109364	160109463	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:156096985;1allele=G/A;version=Hapmap2;RS=rs839855400;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	162352408	162352507	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:156197323;1allele=A/C;version=Hapmap2;RS=rs823223639;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	162426649	162426748	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:156263154;1allele=C/G;version=Hapmap2;RS=rs839434827;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	162432558	162432657	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:156269063;1allele=C/T;version=Hapmap2;RS=rs824189863;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	162466529	162466628	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:156303036;1allele=A/G;version=Hapmap2;RS=rs840551429;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	162528835	162528934	.	+	.	Name=Days_to_silk;B73v2_pos=8:156356558;1allele=C/T;version=Hapmap2;RS=rs1062915927;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	162540461	162540560	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:156369737;1allele=G/T;version=Hapmap2;RS=rs817109466;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	162541494	162541593	.	+	.	Name=Height_above_ear;B73v2_pos=8:156370770;1allele=T/C;version=Hapmap1;RS=rs132492232;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	162542421	162542520	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:156371697;1allele=A/G;version=Hapmap2;RS=rs819720204;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	162547666	162547765	.	+	.	Name=Nitrate;B73v2_pos=8:156376942;1allele=T/A;version=Hapmap2;RS=rs842322273;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	162607795	162607894	.	+	.	Name=Ear_height;B73v2_pos=8:156437266;1allele=C/A;version=Hapmap2;RS=rs724609074;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	162637444	162637543	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:156461755;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	162684503	162684602	.	+	.	Name=Nitrate;B73v2_pos=8:156498401;1allele=G/A;version=Hapmap2;RS=rs815696869;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	162827034	162827133	.	+	.	Name=Ear_height;B73v2_pos=8:156641144;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	162854105	162854204	.	+	.	Name=Tassel_length;B73v2_pos=8:156669106;1allele=C/A;version=Hapmap2;RS=rs725236883;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	163074038	163074137	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:156885700;1allele=+/-;version=Hapmap2;RS=rs810173248;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	163346365	163346464	.	+	.	Name=Leaf_length;B73v2_pos=8:157243577;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	163398256	163398355	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:157168203;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	163486176	163486275	.	+	.	Name=Tassel_length;B73v2_pos=8:157304729;1allele=A/G;version=Hapmap2;RS=rs816413807;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	163556884	163556983	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:157379202;1allele=C/G;version=Hapmap2;RS=rs822315830;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	163750411	163750510	.	+	.	Name=Ear_height;B73v2_pos=8:157563448;1allele=C/T;version=Hapmap2;RS=rs811142336;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	163798213	163798312	.	+	.	Name=Chlorophyll_B;B73v2_pos=8:157611252;1allele=C/T;version=Hapmap2;RS=rs834144986;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	163809420	163809519	.	+	.	Name=Leaf_length;B73v2_pos=8:157622459;1allele=A/C;version=Hapmap2;RS=rs841130509;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	163824157	163824256	.	+	.	Name=Leaf_length;B73v2_pos=8:157637196;1allele=C/T;version=Hapmap2;RS=rs840851714;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	163824261	163824360	.	+	.	Name=Leaf_length;B73v2_pos=8:157637300;1allele=A/G;version=Hapmap2;RS=rs816234368;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	163854622	163854721	.	+	.	Name=Height_above_ear;B73v2_pos=8:157667490;1allele=T/A;version=Hapmap2;RS=rs278602493;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	163855542	163855641	.	+	.	Name=Leaf_length;B73v2_pos=8:157668410;1allele=G/A;version=Hapmap2;RS=rs815316267;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	163857421	163857520	.	+	.	Name=Height_above_ear;B73v2_pos=8:157670289;1allele=A/G;version=Hapmap2;RS=rs132493830;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	164013201	164013300	.	+	.	Name=Days_to_silk;B73v2_pos=8:157885356;1allele=C/T;version=Hapmap2;RS=rs132494202;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	164172686	164172785	.	+	.	Name=Days_to_silk;B73v2_pos=8:157990317;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	164197790	164197889	.	+	.	Name=Days_to_silk;B73v2_pos=8:158045581;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	164239818	164239917	.	+	.	Name=Days_to_silk;B73v2_pos=8:158055041;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	164353729	164353828	.	+	.	Name=Leaf_length;B73v2_pos=8:158129181;1allele=C/T;version=Hapmap2;RS=rs278602994;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	164396130	164396229	.	+	.	Name=Leaf_length;B73v2_pos=8:158204772;1allele=G/A;version=Hapmap2;RS=rs809904751;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	164396178	164396277	.	+	.	Name=Leaf_length;B73v2_pos=8:158204820;1allele=C/T;version=Hapmap2;RS=rs822098762;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	165170917	165171016	.	+	.	Name=Days_to_silk;B73v2_pos=8:158967200;1allele=G/C;version=Hapmap2;RS=rs826970564;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	165188187	165188286	.	+	.	Name=Leaf_length;B73v2_pos=8:158984475;1allele=T/C;version=Hapmap2;RS=rs844457816;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	165190770	165190869	.	+	.	Name=Days_to_silk;B73v2_pos=8:158987058;1allele=T/A;version=Hapmap1;RS=rs837259279;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	165235560	165235659	.	+	.	Name=Days_to_silk;B73v2_pos=8:159031753;1allele=C/G;version=Hapmap2;RS=rs806200184;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	165237085	165237184	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:159033278;1allele=T/C;version=Hapmap1;RS=rs131179839;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	165369698	165369797	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:159165362;1allele=C/T;version=Hapmap2;RS=rs804062025;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	165462373	165462472	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:159258018;1allele=T/C;version=Hapmap2;RS=rs824034418;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	165506595	165506694	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:159299513;1allele=G/A;version=Hapmap2;RS=rs835933642;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	165602835	165602934	.	+	.	Name=Leaf_length;B73v2_pos=8:159391841;1allele=A/G;version=Hapmap2;RS=rs132495610;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	165602899	165602998	.	+	.	Name=Leaf_length;B73v2_pos=8:159391905;1allele=G/A;version=Hapmap2;RS=rs724474367;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	165713514	165713613	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:159495121;1allele=T/C;version=Hapmap2;RS=rs821916422;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	165714063	165714162	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:159495670;1allele=C/G;version=Hapmap2;RS=rs823487808;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	165954306	165954405	.	+	.	Name=Ear_height;B73v2_pos=8:159709019;1allele=G/A;version=Hapmap2;RS=rs1061038188;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	166031311	166031410	.	+	.	Name=Cob_diameter;B73v2_pos=8:159790189;1allele=G/A;version=Hapmap2;RS=rs804863463;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	166032323	166032422	.	+	.	Name=Leaf_width;B73v2_pos=8:159791201;1allele=T/G;version=Hapmap2;RS=rs724977352;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	166032559	166032658	.	+	.	Name=Cob_diameter;B73v2_pos=8:159791437;1allele=T/C;version=Hapmap2;RS=rs846889910;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	166126650	166126749	.	+	.	Name=Cob_diameter;B73v2_pos=8:159885995;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	166131013	166131112	.	+	.	Name=Cob_diameter;B73v2_pos=8:159890359;1allele=C/T;version=Hapmap1;RS=rs132496423;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	166131598	166131697	.	+	.	Name=Cob_diameter;B73v2_pos=8:159890944;1allele=G/C;version=Hapmap1;RS=rs132496443;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	166148961	166149060	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:159908307;1allele=C/G;version=Hapmap2;RS=rs806300947;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	166153035	166153134	.	+	.	Name=Ear_height;B73v2_pos=8:159912381;1allele=G/A;version=Hapmap2;RS=rs811596122;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	166153495	166153594	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:159912841;1allele=T/A;version=Hapmap2;RS=rs130910967;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	166193302	166193401	.	+	.	Name=Tassel_length;B73v2_pos=8:159952230;1allele=G/C;version=Hapmap1;RS=rs814204638;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	166193302	166193401	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:159952230;1allele=G/C;version=Hapmap2;RS=rs814204638;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	166224204	166224303	.	+	.	Name=Leaf_length;B73v2_pos=8:159983532;1allele=A/G;version=Hapmap1;RS=rs130911158;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	166228483	166228582	.	+	.	Name=Tassel_length;B73v2_pos=8:159987811;1allele=A/G;version=Hapmap2;RS=rs841269506;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	166232901	166233000	.	+	.	Name=Height_above_ear;B73v2_pos=8:159992229;1allele=C/T;version=Hapmap1;RS=rs130911213;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	166387426	166387525	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:160181432;1allele=G/C;version=Hapmap1;RS=rs813061027;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	166387426	166387525	.	+	.	Name=Days_to_silk;B73v2_pos=8:160181432;1allele=G/C;version=Hapmap1;RS=rs813061027;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	166457810	166457909	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:160234740;1allele=T/C;version=Hapmap2;RS=rs839777982;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	166458720	166458819	.	+	.	Name=Nitrate;B73v2_pos=8:160235650;1allele=T/A;version=Hapmap2;RS=rs801432456;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	166464235	166464334	.	+	.	Name=Nitrate;B73v2_pos=8:160241165;1allele=T/A;version=Hapmap2;RS=rs822671498;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	166464883	166464982	.	+	.	Name=Nitrate;B73v2_pos=8:160241813;1allele=C/T;version=Hapmap2;RS=rs808501428;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	166476366	166476465	.	+	.	Name=Nitrate;B73v2_pos=8:160253296;1allele=G/A;version=Hapmap2;RS=rs835068698;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	166477176	166477275	.	+	.	Name=Nitrate;B73v2_pos=8:160254106;1allele=A/G;version=Hapmap2;RS=rs822708158;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	166524296	166524395	.	+	.	Name=Tassel_length;B73v2_pos=8:160295652;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	166528647	166528745	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:160300003;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	166546546	166546645	.	+	.	Name=Nitrate;B73v2_pos=8:160322870;1allele=T/C;version=Hapmap2;RS=rs826622677;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	166595563	166595662	.	+	.	Name=Ear_row_number;B73v2_pos=8:160371890;1allele=C/T;version=Hapmap2;RS=rs278604764;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	166613134	166613233	.	+	.	Name=Leaf_width;B73v2_pos=8:160395015;1allele=A/C;version=Hapmap2;RS=rs845947621;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	166634359	166634458	.	+	.	Name=Nitrate;B73v2_pos=8:160416236;1allele=C/T;version=Hapmap2;RS=rs815348054;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	166643251	166643350	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:160425128;1allele=T/C;version=Hapmap1;RS=rs132497800;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	166668038	166668137	.	+	.	Name=Nitrate;B73v2_pos=8:160449917;1allele=C/T;version=Hapmap2;RS=rs815185835;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	166730651	166730750	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:160511259;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	166755923	166756022	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:160537636;1allele=G/T;version=Hapmap2;RS=rs824088333;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	166776952	166777051	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:160558749;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	166776952	166777051	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:160558749;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	166799374	166799473	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:160581173;1allele=C/T;version=Hapmap2;RS=rs727329772;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	166920256	166920355	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:160620235;1allele=G/A;version=Hapmap2;RS=rs838646275;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	167417926	167418025	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161127681;1allele=A/C;version=Hapmap2;RS=rs836488161;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	167447292	167447391	.	+	.	Name=Total_amino_acids;B73v2_pos=8:161157047;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	167460023	167460122	.	+	.	Name=Cob_diameter;B73v2_pos=8:161169777;1allele=A/G;version=Hapmap2;RS=rs804778489;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	167519397	167519496	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:161188821;1allele=C/T;version=Hapmap2;RS=rs278605793;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	167532726	167532825	.	+	.	Name=Fumarate;B73v2_pos=8:161202150;1allele=G/A;version=Hapmap2;RS=rs847532989;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	167582669	167582768	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:161286477;1allele=C/T;version=Hapmap2;RS=rs811592407;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	167584213	167584312	.	+	.	Name=Fumarate;B73v2_pos=8:161288021;1allele=C/A;version=Hapmap2;RS=rs726942044;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	167605865	167605964	.	+	.	Name=Total_amino_acids;B73v2_pos=8:161308292;1allele=A/G;version=Hapmap2;RS=rs725469004;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	167616786	167616885	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:161319218;1allele=G/A;version=Hapmap2;RS=rs834509116;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	167650409	167650508	.	+	.	Name=Nitrate;B73v2_pos=8:161353986;1allele=T/A;version=Hapmap2;RS=rs132498309;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	167695261	167695360	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161398841;1allele=/ATA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	167695591	167695690	.	+	.	Name=Leaf_width;B73v2_pos=8:161399171;1allele=C/T;version=Hapmap2;RS=rs130914098;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	167738767	167738866	.	+	.	Name=Nitrate;B73v2_pos=8:161425232;1allele=T/A;version=Hapmap2;RS=rs829843983;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	167791986	167792085	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:161482741;1allele=T/C;version=Hapmap2;RS=rs844385477;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	167823184	167823283	.	+	.	Name=Nitrate;B73v2_pos=8:161514222;1allele=C/T;version=Hapmap2;RS=rs808524981;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	167841342	167841441	.	+	.	Name=Nitrate;B73v2_pos=8:161531963;1allele=G/A;version=Hapmap2;RS=rs819081203;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	167851897	167851996	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:161542518;1allele=T/C;version=Hapmap2;RS=rs816842063;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	167860667	167860766	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:161550094;1allele=C/T;version=Hapmap2;RS=rs829251458;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	167875385	167875484	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161563027;1allele=+/-;version=Hapmap2;RS=rs130914296;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	167944745	167944844	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161627615;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	168030208	168030307	.	+	.	Name=Days_to_silk;B73v2_pos=8:161710984;1allele=G/T;version=Hapmap2;RS=rs847151094;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	168030208	168030307	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161710984;1allele=G/T;version=Hapmap2;RS=rs847151094;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	168030209	168030308	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161710985;1allele=G/T;version=Hapmap2;RS=rs802556511;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	168030482	168030581	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161711258;1allele=A/G;version=Hapmap2;RS=rs132499186;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	168041711	168041810	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161722487;1allele=T/C;version=Hapmap2;RS=rs818046324;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	168041831	168041930	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:161722607;1allele=A/C;version=Hapmap2;RS=rs809651870;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	168041831	168041930	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:161722607;1allele=A/C;version=Hapmap2;RS=rs809651870;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	168043729	168043828	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161724505;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	168043949	168044048	.	+	.	Name=Total_amino_acids;B73v2_pos=8:161724725;1allele=C/T;version=Hapmap2;RS=rs132499228;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168051634	168051733	.	+	.	Name=Starch;B73v2_pos=8:161732413;1allele=C/T;version=Hapmap2;RS=rs803473462;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168052514	168052613	.	+	.	Name=Tassel_length;B73v2_pos=8:161733294;1allele=C/T;version=Hapmap2;RS=rs832214389;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168052823	168052922	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:161733603;1allele=G/A;version=Hapmap2;RS=rs278606337;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	168052968	168053067	.	+	.	Name=Total_amino_acids;B73v2_pos=8:161733748;1allele=C/T;version=Hapmap2;RS=rs810908755;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168060882	168060981	.	+	.	Name=Fumarate;B73v2_pos=8:161741662;1allele=C/T;version=Hapmap1;RS=rs132499299;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168061868	168061967	.	+	.	Name=Height_above_ear;B73v2_pos=8:161742648;1allele=C/T;version=Hapmap2;RS=rs823198700;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168110157	168110256	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:161790885;1allele=G/A;version=Hapmap2;RS=rs828481866;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	168130414	168130513	.	+	.	Name=Cob_diameter;B73v2_pos=8:161811143;1allele=A/C;version=Hapmap2;RS=rs828223097;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	168157320	168157419	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161838050;1allele=A/G;version=Hapmap1;RS=rs132499471;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	168157518	168157617	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161838248;1allele=T/C;version=Hapmap2;RS=rs132499477;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	168202933	168203032	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:161883666;1allele=C/G;version=Hapmap2;RS=rs725199492;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	168222859	168222958	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:161903596;1allele=A/G;version=Hapmap2;RS=rs132499577;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	168232326	168232425	.	+	.	Name=Cob_diameter;B73v2_pos=8:161913063;1allele=G/A;version=Hapmap2;RS=rs836579395;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	168501582	168501681	.	+	.	Name=Days_to_silk;B73v2_pos=8:162186643;1allele=A/G;version=Hapmap1;RS=rs132499750;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	168502033	168502132	.	+	.	Name=Days_to_silk;B73v2_pos=8:162187094;1allele=A/C;version=Hapmap1;RS=rs132499758;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	168503613	168503712	.	+	.	Name=Days_to_silk;B73v2_pos=8:162188674;1allele=A/T;version=Hapmap2;RS=rs130915612;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	168532139	168532238	.	+	.	Name=Fumarate;B73v2_pos=8:162219601;1allele=C/A;version=Hapmap2;RS=rs817824257;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	168532382	168532481	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:162219844;1allele=G/C;version=Hapmap2;RS=rs725551709;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	168534319	168534418	.	+	.	Name=Fumarate;B73v2_pos=8:162221781;1allele=G/T;version=Hapmap2;RS=rs278606985;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	168628360	168628459	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:162316817;1allele=T/C;version=Hapmap2;RS=rs823468607;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	168641078	168641177	.	+	.	Name=Total_amino_acids;B73v2_pos=8:162329535;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	168822062	168822161	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:162514024;1allele=C/T;version=Hapmap2;RS=rs130916098;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168825475	168825574	.	+	.	Name=Leaf_length;B73v2_pos=8:162517437;1allele=T/C;version=Hapmap2;RS=rs726181542;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	168837545	168837644	.	+	.	Name=Ear_height;B73v2_pos=8:162529507;1allele=C/A;version=Hapmap2;RS=rs130916193;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	168840896	168840995	.	+	.	Name=Ear_row_number;B73v2_pos=8:162532858;1allele=G/A;version=Hapmap1;RS=rs132500004;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	168845741	168845840	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:162537703;1allele=+/-;version=Hapmap2;RS=rs807878891;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168849230	168849329	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:162541192;1allele=G/C;version=Hapmap1;RS=rs132500109;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	168849302	168849401	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:162541264;1allele=A/G;version=Hapmap2;RS=rs132500114;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	168850283	168850382	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:162542245;1allele=T/C;version=Hapmap2;RS=rs808294118;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	168851543	168851642	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:162543505;1allele=/ACG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	168856763	168856862	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:162548722;1allele=C/T;version=Hapmap2;RS=rs846998667;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	168870554	168870653	.	+	.	Name=Days_to_silk;B73v2_pos=8:162562513;1allele=C/G;version=Hapmap2;RS=rs727027568;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	168872584	168872683	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:162564543;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	168988457	168988556	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:162675049;1allele=A/G;version=Hapmap2;RS=rs839093872;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	169063820	169063919	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:162754524;1allele=C/A;version=Hapmap2;RS=rs807002388;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	169066229	169066328	.	+	.	Name=Days_to_silk;B73v2_pos=8:162756933;1allele=C/A;version=Hapmap2;RS=rs130916710;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	169066467	169066566	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:162757171;1allele=G/A;version=Hapmap2;RS=rs817502491;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	169066556	169066655	.	+	.	Name=Days_to_silk;B73v2_pos=8:162757260;1allele=G/C;version=Hapmap2;RS=rs130916716;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	169096139	169096238	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:162786574;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	169101176	169101275	.	+	.	Name=Total_amino_acids;B73v2_pos=8:162791611;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	169102082	169102181	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:162792517;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	169106916	169107015	.	+	.	Name=Total_amino_acids;B73v2_pos=8:162797351;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	169137841	169137940	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:162832035;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	169163825	169163924	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:162857953;1allele=A/G;version=Hapmap2;RS=rs847594567;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	169238750	169238849	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:162934126;1allele=A/G;version=Hapmap2;RS=rs1062337073;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	169243220	169243319	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:162938596;1allele=C/T;version=Hapmap2;RS=rs278607858;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	169329984	169330083	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163037655;1allele=T/C;version=Hapmap2;RS=rs278608023;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	169331174	169331273	.	+	.	Name=Days_to_silk;B73v2_pos=8:163038845;1allele=C/T;version=Hapmap2;RS=rs132500997;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	169411467	169411566	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:163119406;1allele=T/C;version=Hapmap2;RS=rs813871384;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	169470781	169470880	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163179712;1allele=G/A;version=Hapmap1;RS=rs132501044;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	169508122	169508221	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163215108;1allele=T/G;version=Hapmap1;RS=rs130917614;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	169513386	169513485	.	+	.	Name=Glucose;B73v2_pos=8:163220372;1allele=T/A;version=Hapmap2;RS=rs130917664;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	169573330	169573429	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:163285276;1allele=C/A;version=Hapmap2;RS=rs278608130;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	169600039	169600138	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:163311987;1allele=C/T;version=Hapmap2;RS=rs839744038;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	169710673	169710772	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:163423041;1allele=T/C;version=Hapmap2;RS=rs841654384;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	169832014	169832113	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:163549190;1allele=/CGGGGT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170000254	170000352	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:163715623;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170000852	170000951	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163716223;1allele=A/C;version=Hapmap2;RS=rs132501654;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	170009538	170009637	.	+	.	Name=Ear_row_number;B73v2_pos=8:163724905;1allele=C/T;version=Hapmap1;RS=rs132501679;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170014911	170015010	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163730118;1allele=+/-;version=Hapmap2;RS=rs825341689;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170014912	170015011	.	+	.	Name=Days_to_silk;B73v2_pos=8:163730119;1allele=CG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170023027	170023126	.	+	.	Name=Days_to_silk;B73v2_pos=8:163738234;1allele=C/T;version=Hapmap2;RS=rs844009704;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170030139	170030238	.	+	.	Name=Protein;B73v2_pos=8:163745346;1allele=T/A;version=Hapmap2;RS=rs809076352;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	170030171	170030270	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163745378;1allele=T/G;version=Hapmap2;RS=rs842781527;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	170049000	170049099	.	+	.	Name=Nitrate;B73v2_pos=8:163760327;1allele=C/T;version=Hapmap2;RS=rs827822423;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170148171	170148270	.	+	.	Name=Days_to_silk;B73v2_pos=8:163853887;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170148171	170148270	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163853887;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170155919	170156018	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:163844793;1allele=T/C;version=Hapmap2;RS=rs824673150;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170155934	170156033	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163844778;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170158346	170158445	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:163842366;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170164617	170164716	.	+	.	Name=Ear_height;B73v2_pos=8:163892155;1allele=T/G;version=Hapmap2;RS=rs801872342;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	170164617	170164716	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:163892155;1allele=T/G;version=Hapmap2;RS=rs801872342;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	170166573	170166672	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:163894111;1allele=T/C;version=Hapmap2;RS=rs817538527;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170167195	170167294	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:163894733;1allele=T/C;version=Hapmap2;RS=rs826273319;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170171087	170171186	.	+	.	Name=Tassel_length;B73v2_pos=8:163898625;1allele=G/A;version=Hapmap2;RS=rs130918283;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170178857	170178956	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:163906395;1allele=C/T;version=Hapmap2;RS=rs130918344;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170180230	170180329	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:163907768;1allele=C/G;version=Hapmap2;RS=rs814493312;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170186766	170186865	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163914223;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170246535	170246634	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163968977;1allele=A/G;version=Hapmap2;RS=rs821636154;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170257949	170258048	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163980393;1allele=T/C;version=Hapmap2;RS=rs821433306;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170260105	170260204	.	+	.	Name=Total_amino_acids;B73v2_pos=8:163982549;1allele=T/A;version=Hapmap2;RS=rs829890973;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	170273784	170273883	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:163998002;1allele=T/C;version=Hapmap2;RS=rs130918545;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170274164	170274263	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:163998382;1allele=A/G;version=Hapmap2;RS=rs828308233;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170287180	170287279	.	+	.	Name=Days_to_silk;B73v2_pos=8:164011398;1allele=G/A;version=Hapmap1;RS=rs132502162;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170287180	170287279	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164011398;1allele=G/A;version=Hapmap1;RS=rs132502162;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170287573	170287672	.	+	.	Name=Days_to_silk;B73v2_pos=8:164011791;1allele=C/G;version=Hapmap2;RS=rs829275740;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170287573	170287672	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:164011791;1allele=C/G;version=Hapmap1;RS=rs829275740;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170287654	170287753	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164011872;1allele=C/A;version=Hapmap1;RS=rs132502169;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170287943	170288042	.	+	.	Name=Days_to_silk;B73v2_pos=8:164012161;1allele=G/C;version=Hapmap1;RS=rs838512426;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	170290034	170290133	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164014252;1allele=T/C;version=Hapmap1;RS=rs132502466;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	170291654	170291753	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164015816;1allele=A/C;version=Hapmap1;RS=rs132502489;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170291895	170291994	.	+	.	Name=Ear_height;B73v2_pos=8:164016057;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170297307	170297406	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164021469;1allele=C/-;version=Hapmap1;RS=rs132502291;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170303963	170304062	.	+	.	Name=Plant_height;B73v2_pos=8:164028125;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170306182	170306281	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164030344;1allele=G/A;version=Hapmap2;RS=rs840310922;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	170306755	170306854	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164030917;1allele=G/A;version=Hapmap2;RS=rs807314675;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170314813	170314912	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:164038974;1allele=A/C;version=Hapmap2;RS=rs845259238;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170314822	170314921	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:164038983;1allele=T/C;version=Hapmap2;RS=rs827426774;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170335352	170335451	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164061051;1allele=G/A;version=Hapmap2;RS=rs130918606;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170335808	170335907	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164061507;1allele=A/G;version=Hapmap2;RS=rs850370706;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170339722	170339821	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164065421;1allele=T/C;version=Hapmap2;RS=rs130918640;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170340179	170340278	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164065878;1allele=A/G;version=Hapmap2;RS=rs847146639;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170340179	170340278	.	+	.	Name=Days_to_silk;B73v2_pos=8:164065878;1allele=A/G;version=Hapmap2;RS=rs847146639;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170356130	170356229	.	+	.	Name=Days_to_silk;B73v2_pos=8:164081553;1allele=C/T;version=Hapmap2;RS=rs845311834;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170368226	170368325	.	+	.	Name=Total_amino_acids;B73v2_pos=8:164093744;1allele=A/G;version=Hapmap2;RS=rs278608969;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170413974	170414073	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164137870;1allele=A/G;version=Hapmap2;RS=rs132502613;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170413974	170414073	.	+	.	Name=Days_to_silk;B73v2_pos=8:164137870;1allele=A/G;version=Hapmap2;RS=rs132502613;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170469805	170469904	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:164182062;1allele=G/A;version=Hapmap2;RS=rs130919051;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170476406	170476505	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164188667;1allele=A/T;version=Hapmap2;RS=rs727281888;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	170478694	170478793	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:164190955;1allele=G/A;version=Hapmap2;RS=rs130919113;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170557551	170557650	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164266443;1allele=C/G;version=Hapmap2;RS=rs842326054;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170627399	170627498	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:164399060;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170631650	170631749	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164403310;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170652459	170652558	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164353684;1allele=G/A;version=Hapmap2;RS=rs812160766;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170655388	170655487	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:164356614;1allele=G/C;version=Hapmap1;RS=rs827443197;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170655388	170655487	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164356614;1allele=C/G;version=Hapmap2;RS=rs827443197;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170655388	170655487	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:164356614;1allele=G/C;version=Hapmap1;RS=rs827443197;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	170661870	170661969	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164363096;1allele=G/A;version=Hapmap1;RS=rs132502918;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170662011	170662110	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:164363237;1allele=C/T;version=Hapmap2;RS=rs132502914;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170673740	170673839	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164375068;1allele=T/C;version=Hapmap2;RS=rs824789471;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170673918	170674017	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164375246;1allele=A/G;version=Hapmap2;RS=rs846996042;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170674414	170674513	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:164375742;1allele=T/C;version=Hapmap2;RS=rs726534841;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170682974	170683073	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=8:164384302;1allele=C/G;version=Hapmap1;RS=rs130919228;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	170686543	170686642	.	+	.	Name=Height_above_ear;B73v2_pos=8:164387871;1allele=G/A;version=Hapmap2;RS=rs841585496;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170695779	170695878	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:164408415;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	170722019	170722118	.	+	.	Name=Stalk_strength;B73v2_pos=8:164432714;1allele=A/T;version=Hapmap2;RS=rs836577619;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	170724266	170724365	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:164434961;1allele=T/C;version=Hapmap2;RS=rs130919329;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170733003	170733102	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:164443699;1allele=T/C;version=Hapmap2;RS=rs825575358;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	170817392	170817491	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:164526327;1allele=C/T;version=Hapmap2;RS=rs817173618;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	170842114	170842213	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:164550821;1allele=A/G;version=Hapmap2;RS=rs278609343;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170842376	170842475	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:164551083;1allele=G/A;version=Hapmap1;RS=rs278609348;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170846954	170847053	.	+	.	Name=Days_to_silk;B73v2_pos=8:164555661;1allele=G/A;version=Hapmap2;RS=rs849195399;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170849493	170849592	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:164558200;1allele=A/G;version=Hapmap2;RS=rs130919581;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	170851503	170851602	.	+	.	Name=Height_above_ear;B73v2_pos=8:164560210;1allele=A/T;version=Hapmap1;RS=rs132503237;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	170866919	170867018	.	+	.	Name=Days_to_silk;B73v2_pos=8:164575626;1allele=A/G;version=Hapmap2;RS=rs832767640;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	170902354	170902453	.	+	.	Name=Height_above_ear;B73v2_pos=8:164615755;1allele=G/T;version=Hapmap2;RS=rs838688038;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	171156731	171156830	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:164686518;1allele=T/G;version=Hapmap2;RS=rs803326145;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171197110	171197209	.	+	.	Name=Stalk_strength;B73v2_pos=8:164728738;1allele=C/T;version=Hapmap2;RS=rs802467873;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171205070	171205169	.	+	.	Name=Total_amino_acids;B73v2_pos=8:164736697;1allele=T/C;version=Hapmap1;RS=rs132503654;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171207043	171207142	.	+	.	Name=Height_above_ear;B73v2_pos=8:164738670;1allele=G/C;version=Hapmap2;RS=rs132503717;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	171220383	171220482	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:164752009;1allele=A/G;version=Hapmap1;RS=rs130920219;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	171228084	171228183	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:164759710;1allele=C/T;version=Hapmap2;RS=rs818579470;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171249571	171249670	.	+	.	Name=Stalk_strength;B73v2_pos=8:164780572;1allele=G/A;version=Hapmap2;RS=rs830983275;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	171273789	171273888	.	+	.	Name=Height_above_ear;B73v2_pos=8:164842352;1allele=C/T;version=Hapmap1;RS=rs132503828;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171324202	171324301	.	+	.	Name=Stalk_strength;B73v2_pos=8:164855032;1allele=T/C;version=Hapmap2;RS=rs844703779;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	171335977	171336076	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:164866795;1allele=C/T;version=Hapmap1;RS=rs132503901;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171364903	171365002	.	+	.	Name=Stalk_strength;B73v2_pos=8:164895913;1allele=G/T;version=Hapmap2;RS=rs132503934;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	171377874	171377973	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:164908884;1allele=A/T;version=Hapmap2;RS=rs827776443;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	171377888	171377987	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:164908898;1allele=A/T;version=Hapmap2;RS=rs823371186;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	171378036	171378135	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:164909046;1allele=A/G;version=Hapmap2;RS=rs278609843;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	171406056	171406155	.	+	.	Name=Ear_row_number;B73v2_pos=8:164935484;1allele=G/T;version=Hapmap2;RS=rs278609893;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171407352	171407451	.	+	.	Name=Ear_row_number;B73v2_pos=8:164936780;1allele=C/A;version=Hapmap2;RS=rs132504139;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	171415099	171415198	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:164944528;1allele=T/C;version=Hapmap2;RS=rs836056856;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	171436907	171437006	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:164963701;1allele=A/G;version=Hapmap2;RS=rs840806519;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	171437775	171437874	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:164964569;1allele=G/C;version=Hapmap2;RS=rs130920752;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	171438238	171438337	.	+	.	Name=Stalk_strength;B73v2_pos=8:164965032;1allele=C/T;version=Hapmap2;RS=rs726105817;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171461451	171461550	.	+	.	Name=Stalk_strength;B73v2_pos=8:164981620;1allele=G/A;version=Hapmap2;RS=rs819611853;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	171522105	171522204	.	+	.	Name=Stalk_strength;B73v2_pos=8:165042018;1allele=C/T;version=Hapmap2;RS=rs819530309;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171585410	171585509	.	+	.	Name=Stalk_strength;B73v2_pos=8:165113162;1allele=T/G;version=Hapmap2;RS=rs825755709;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171594216	171594315	.	+	.	Name=Stalk_strength;B73v2_pos=8:165121973;1allele=T/G;version=Hapmap2;RS=rs844137691;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171631329	171631428	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:165155743;1allele=A/C;version=Hapmap1;RS=rs132504274;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	171633053	171633152	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165157467;1allele=A/C;version=Hapmap2;RS=rs130920919;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	171636668	171636767	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165161082;1allele=A/G;version=Hapmap2;RS=rs132504316;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	171641685	171641784	.	+	.	Name=Stalk_strength;B73v2_pos=8:165166099;1allele=T/A;version=Hapmap2;RS=rs805180989;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	171658437	171658536	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165182851;1allele=C/A;version=Hapmap1;RS=rs132504405;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	171697560	171697659	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165221980;1allele=G/T;version=Hapmap2;RS=rs842320645;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	171708737	171708836	.	+	.	Name=Leaf_length;B73v2_pos=8:165233157;1allele=A/C;version=Hapmap1;RS=rs132504488;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	171708904	171709003	.	+	.	Name=Leaf_length;B73v2_pos=8:165233324;1allele=C/A;version=Hapmap1;RS=rs132504492;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171709101	171709200	.	+	.	Name=Leaf_length;B73v2_pos=8:165233521;1allele=AAAA/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171714058	171714157	.	+	.	Name=Height_above_ear;B73v2_pos=8:165238478;1allele=G/A;version=Hapmap2;RS=rs130921338;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	171714344	171714443	.	+	.	Name=Plant_height;B73v2_pos=8:165238764;1allele=T/A;version=Hapmap2;RS=rs130921339;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	171714344	171714443	.	+	.	Name=Height_above_ear;B73v2_pos=8:165238764;1allele=T/A;version=Hapmap1;RS=rs130921339;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	171714467	171714566	.	+	.	Name=Stalk_strength;B73v2_pos=8:165238887;1allele=G/A;version=Hapmap1;RS=rs132504566;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	171714567	171714666	.	+	.	Name=Height_above_ear;B73v2_pos=8:165238987;1allele=T/C;version=Hapmap1;RS=rs130921340;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	171729049	171729148	.	+	.	Name=Starch;B73v2_pos=8:165253474;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171729049	171729148	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:165253474;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171736331	171736430	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:165260756;1allele=/ATTCT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171737473	171737572	.	+	.	Name=Stalk_strength;B73v2_pos=8:165261898;1allele=G/A;version=Hapmap2;RS=rs813980471;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	171740295	171740394	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:165264213;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171742640	171742739	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:165266558;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171745019	171745118	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:165268937;1allele=A/G;version=Hapmap2;RS=rs130921423;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	171745074	171745173	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:165268992;1allele=A/C;version=Hapmap1;RS=rs132504752;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	171745732	171745831	.	+	.	Name=Height_above_ear;B73v2_pos=8:165269650;1allele=G/T;version=Hapmap2;RS=rs132504758;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	171745968	171746067	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165269886;1allele=A/C;version=Hapmap1;RS=rs130921436;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	171749888	171749987	.	+	.	Name=Stalk_strength;B73v2_pos=8:165273806;1allele=G/C;version=Hapmap2;RS=rs833263091;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	171751086	171751185	.	+	.	Name=Height_above_ear;B73v2_pos=8:165275004;1allele=T/G;version=Hapmap2;RS=rs130921460;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171753700	171753799	.	+	.	Name=Leaf_length;B73v2_pos=8:165277564;1allele=G/T;version=Hapmap2;RS=rs846243731;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	171753870	171753969	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165277734;1allele=CTG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171754071	171754170	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165277935;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171755987	171756086	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165279851;1allele=G/A;version=Hapmap2;RS=rs820741025;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	171757296	171757395	.	+	.	Name=Stalk_strength;B73v2_pos=8:165281160;1allele=T/C;version=Hapmap2;RS=rs838701927;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171761831	171761930	.	+	.	Name=Stalk_strength;B73v2_pos=8:165285695;1allele=T/G;version=Hapmap2;RS=rs831649467;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171770143	171770242	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165294007;1allele=A/G;version=Hapmap2;RS=rs809548378;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	171771805	171771904	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:165295669;1allele=T/G;version=Hapmap2;RS=rs278610470;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	171792724	171792823	.	+	.	Name=Height_above_ear;B73v2_pos=8:165316588;1allele=G/A;version=Hapmap2;RS=rs1062477784;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	171824687	171824786	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:165350680;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171826070	171826169	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:165352063;1allele=C/T;version=Hapmap2;RS=rs278610511;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171868483	171868582	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:165395856;1allele=G/C;version=Hapmap2;RS=rs820310412;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	171868483	171868582	.	+	.	Name=Height_above_ear;B73v2_pos=8:165395856;1allele=G/C;version=Hapmap2;RS=rs820310412;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	171874033	171874132	.	+	.	Name=Leaf_length;B73v2_pos=8:165401406;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171874106	171874205	.	+	.	Name=Leaf_length;B73v2_pos=8:165401479;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	171878186	171878285	.	+	.	Name=Leaf_width;B73v2_pos=8:165405559;1allele=C/T;version=Hapmap2;RS=rs278610575;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171883816	171883915	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165411189;1allele=C/T;version=Hapmap1;RS=rs130921780;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171901047	171901146	.	+	.	Name=Starch;B73v2_pos=8:165428420;1allele=C/T;version=Hapmap2;RS=rs810532103;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	171909323	171909422	.	+	.	Name=Leaf_width;B73v2_pos=8:165436696;1allele=A/G;version=Hapmap2;RS=rs824212860;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	171910640	171910739	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:165438014;1allele=T/C;version=Hapmap2;RS=rs806468852;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172010320	172010419	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:165532390;1allele=G/A;version=Hapmap2;RS=rs801561285;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172010684	172010783	.	+	.	Name=Height_above_ear;B73v2_pos=8:165532754;1allele=A/C;version=Hapmap2;RS=rs1060680336;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	172024676	172024775	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:165546746;1allele=A/C;version=Hapmap2;RS=rs838424632;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	172025290	172025389	.	+	.	Name=Starch;B73v2_pos=8:165547360;1allele=A/G;version=Hapmap2;RS=rs278610691;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172030378	172030477	.	+	.	Name=Height_above_ear;B73v2_pos=8:165552448;1allele=C/G;version=Hapmap1;RS=rs132505221;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	172035511	172035610	.	+	.	Name=Total_amino_acids;B73v2_pos=8:165557566;1allele=G/C;version=Hapmap2;RS=rs727496744;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	172039993	172040092	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165562048;1allele=C/G;version=Hapmap2;RS=rs849712068;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172060425	172060524	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165582480;1allele=T/G;version=Hapmap2;RS=rs831956545;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	172062588	172062687	.	+	.	Name=Stalk_strength;B73v2_pos=8:165584643;1allele=-/+;version=Hapmap2;RS=rs810839436;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172064295	172064394	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:165586350;1allele=T/G;version=Hapmap2;RS=rs130922038;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	172064324	172064423	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165586379;1allele=ATCT/;version=Hapmap1;RS=rs844538025;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	172066883	172066982	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:165588938;1allele=G/A;version=Hapmap2;RS=rs813444921;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172066883	172066982	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165588938;1allele=G/A;version=Hapmap2;RS=rs813444921;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172066910	172067009	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:165588965;1allele=G/C;version=Hapmap2;RS=rs844119185;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	172071655	172071754	.	+	.	Name=Plant_height;B73v2_pos=8:165593710;1allele=A/G;version=Hapmap1;RS=rs132505422;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172073486	172073585	.	+	.	Name=Height_above_ear;B73v2_pos=8:165595541;1allele=A/G;version=Hapmap1;RS=rs132505443;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172073598	172073697	.	+	.	Name=Height_above_ear;B73v2_pos=8:165595653;1allele=T/G;version=Hapmap2;RS=rs823101921;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	172106216	172106315	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:165628249;1allele=A/G;version=Hapmap2;RS=rs842508824;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172107404	172107503	.	+	.	Name=Height_above_ear;B73v2_pos=8:165629437;1allele=T/C;version=Hapmap2;RS=rs802184199;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172120237	172120336	.	+	.	Name=Height_above_ear;B73v2_pos=8:165655444;1allele=C/G;version=Hapmap2;RS=rs278610843;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172120253	172120352	.	+	.	Name=Height_above_ear;B73v2_pos=8:165655460;1allele=T/C;version=Hapmap2;RS=rs278610844;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172201040	172201139	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165715764;1allele=C/G;version=Hapmap1;RS=rs132505600;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172201239	172201338	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165715963;1allele=/GTAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172201900	172201999	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:165716624;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172201932	172202031	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:165716656;1allele=T/C;version=Hapmap1;RS=rs132505614;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172202008	172202107	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165716732;1allele=A/G;version=Hapmap2;RS=rs850206990;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172206426	172206525	.	+	.	Name=Sucrose;B73v2_pos=8:165721140;1allele=A/C;version=Hapmap2;RS=rs815091351;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	172207186	172207285	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:165721900;1allele=C/T;version=Hapmap2;RS=rs844241750;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	172207333	172207432	.	+	.	Name=Stalk_strength;B73v2_pos=8:165722047;1allele=G/C;version=Hapmap2;RS=rs842057089;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	172207407	172207506	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:165722121;1allele=G/C;version=Hapmap2;RS=rs278610971;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172211085	172211184	.	+	.	Name=Stalk_strength;B73v2_pos=8:165725799;1allele=/TA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172211133	172211232	.	+	.	Name=Stalk_strength;B73v2_pos=8:165725847;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172279996	172280095	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:187716217;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172350115	172350214	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:165859468;1allele=A/T;version=Hapmap2;RS=rs810134515;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	172350634	172350733	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:165859987;1allele=T/C;version=Hapmap2;RS=rs817263917;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172366315	172366414	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165874312;1allele=AG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172366550	172366649	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165874547;1allele=+/-;version=Hapmap2;RS=rs132506093;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	172373113	172373206	.	+	.	Name=Stalk_strength;B73v2_pos=8:165881112;1allele=T/G;version=Hapmap2;RS=rs816556203;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	172414244	172414343	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:165890708;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172418224	172418323	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165894384;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172447551	172447650	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165925377;1allele=C/G;version=Hapmap2;RS=rs130922815;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172447900	172447999	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:165925726;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172497710	172497809	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:165975467;1allele=G/T;version=Hapmap2;RS=rs818673704;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	172506767	172506866	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165984526;1allele=G/A;version=Hapmap2;RS=rs132506187;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172507062	172507161	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165984821;1allele=C/T;version=Hapmap2;RS=rs725606225;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	172508355	172508454	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165986114;1allele=G/A;version=Hapmap2;RS=rs802158122;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172509913	172510012	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165987672;1allele=G/T;version=Hapmap2;RS=rs848483757;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	172511126	172511225	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:165988885;1allele=A/T;version=Hapmap2;RS=rs809326707;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	172512425	172512524	.	+	.	Name=Starch;B73v2_pos=8:165990184;1allele=T/A;version=Hapmap2;RS=rs130922905;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	172515527	172515626	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:165993286;1allele=T/C;version=Hapmap2;RS=rs816360747;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172515695	172515794	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:165993454;1allele=C/G;version=Hapmap2;RS=rs278611383;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172520247	172520346	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:165997992;1allele=G/A;version=Hapmap2;RS=rs802236145;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172545399	172545498	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:166022928;1allele=T/G;version=Hapmap2;RS=rs820218226;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	172600852	172600951	.	+	.	Name=Starch;B73v2_pos=8:166078095;1allele=A/G;version=Hapmap2;RS=rs278611447;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172603524	172603623	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:166080767;1allele=G/C;version=Hapmap2;RS=rs813976567;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	172605813	172605912	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:166083056;1allele=T/C;version=Hapmap2;RS=rs827830986;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172625274	172625373	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166103978;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172707504	172707603	.	+	.	Name=Starch;B73v2_pos=8:166184503;1allele=A/T;version=Hapmap2;RS=rs821888053;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	172707504	172707603	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:166184503;1allele=A/T;version=Hapmap2;RS=rs821888053;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	172710391	172710490	.	+	.	Name=Starch;B73v2_pos=8:166187391;1allele=G/A;version=Hapmap2;RS=rs130923236;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172766488	172766587	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166241960;1allele=A/T;version=Hapmap2;RS=rs278611625;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	172888055	172888154	.	+	.	Name=Days_to_anthesis;B73v2_pos=8:166368091;1allele=T/C;version=Hapmap2;RS=rs850253645;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	172892240	172892339	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166372281;1allele=G/A;version=Hapmap2;RS=rs278611651;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172892672	172892771	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166372713;1allele=C/T;version=Hapmap2;RS=rs132506491;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	172906346	172906445	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166386387;1allele=G/A;version=Hapmap2;RS=rs724370979;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172906803	172906902	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166386844;1allele=A/G;version=Hapmap2;RS=rs1063051932;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	172906856	172906955	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166386897;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172913194	172913293	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166392130;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	172913742	172913841	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166392678;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173003149	173003248	.	+	.	Name=Height_above_ear;B73v2_pos=8:166484516;1allele=T/C;version=Hapmap2;RS=rs832435673;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173023182	173023281	.	+	.	Name=Starch;B73v2_pos=8:166504553;1allele=C/T;version=Hapmap2;RS=rs821971028;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173033243	173033342	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166514680;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173059546	173059645	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:166530906;1allele=G/A;version=Hapmap2;RS=rs847965839;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	173059781	173059880	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:166531141;1allele=G/A;version=Hapmap1;RS=rs132506980;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173090380	173090479	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:166564077;1allele=C/T;version=Hapmap2;RS=rs848340243;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173093215	173093314	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166566912;1allele=G/A;version=Hapmap2;RS=rs132506780;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173093419	173093518	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166567116;1allele=C/T;version=Hapmap2;RS=rs132506790;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173093480	173093579	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166567177;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173102527	173102626	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:166576224;1allele=C/A;version=Hapmap1;RS=rs132506812;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	173110753	173110852	.	+	.	Name=Height_above_ear;B73v2_pos=8:166584448;1allele=C/T;version=Hapmap2;RS=rs1063708746;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173114891	173114990	.	+	.	Name=Height_above_ear;B73v2_pos=8:166613526;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173117320	173117419	.	+	.	Name=Height_above_ear;B73v2_pos=8:166615955;1allele=C/G;version=Hapmap2;RS=rs817501554;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	173119196	173119295	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:166617831;1allele=C/G;version=Hapmap1;RS=rs132507097;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173120070	173120169	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:166618705;1allele=A/G;version=Hapmap2;RS=rs801474516;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173120070	173120169	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:166618705;1allele=A/G;version=Hapmap2;RS=rs801474516;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173122462	173122561	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166621099;1allele=C/T;version=Hapmap2;RS=rs130923971;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173124037	173124136	.	+	.	Name=Height_above_ear;B73v2_pos=8:166622674;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173128019	173128118	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:166626656;1allele=/CTTGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173144144	173144243	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166642906;1allele=A/G;version=Hapmap2;RS=rs836834470;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173154250	173154349	.	+	.	Name=Starch;B73v2_pos=8:166653012;1allele=C/G;version=Hapmap2;RS=rs132507060;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	173155558	173155657	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:166654320;1allele=T/G;version=Hapmap2;RS=rs823737551;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	173197420	173197519	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:166673368;1allele=C/T;version=Hapmap2;RS=rs804251868;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173200417	173200516	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166676366;1allele=C/A;version=Hapmap1;RS=rs132507308;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173211142	173211241	.	+	.	Name=Starch;B73v2_pos=8:166705684;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173240847	173240946	.	+	.	Name=Starch;B73v2_pos=8:166714843;1allele=A/T;version=Hapmap2;RS=rs832458967;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	173241218	173241317	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166715214;1allele=C/A;version=Hapmap2;RS=rs807697111;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	173271725	173271824	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:166745433;1allele=A/C;version=Hapmap2;RS=rs808748158;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	173274036	173274135	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:166747744;1allele=T/A;version=Hapmap1;RS=rs132507370;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	173308479	173308578	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166781587;1allele=C/T;version=Hapmap2;RS=rs132507401;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173309916	173310015	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166783024;1allele=C/A;version=Hapmap2;RS=rs132507428;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	173309919	173310018	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166783027;1allele=G/C;version=Hapmap1;RS=rs278612225;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	173322551	173322650	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166795660;1allele=C/T;version=Hapmap2;RS=rs726290528;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173325458	173325557	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166798567;1allele=C/T;version=Hapmap2;RS=rs132507579;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173326938	173327037	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166800047;1allele=G/T;version=Hapmap2;RS=rs827435646;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	173331574	173331673	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:166804683;1allele=C/T;version=Hapmap2;RS=rs837038247;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	173331726	173331825	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166804835;1allele=C/T;version=Hapmap2;RS=rs132507589;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173331726	173331825	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:166804835;1allele=C/T;version=Hapmap2;RS=rs132507589;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173334026	173334125	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166807135;1allele=G/C;version=Hapmap2;RS=rs845592316;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	173334890	173334989	.	+	.	Name=Stalk_strength;B73v2_pos=8:166807999;1allele=G/A;version=Hapmap1;RS=rs132507604;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	173335387	173335486	.	+	.	Name=Ear_height;B73v2_pos=8:166808496;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173335387	173335486	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:166808496;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173337022	173337121	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166810131;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173338151	173338250	.	+	.	Name=Starch;B73v2_pos=8:166811260;1allele=T/C;version=Hapmap2;RS=rs845556870;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173345032	173345131	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166818141;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173345055	173345154	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166818164;1allele=+/-;version=Hapmap2;RS=rs849637789;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173351571	173351670	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166824680;1allele=C/T;version=Hapmap2;RS=rs821731920;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173351642	173351741	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166824751;1allele=C/A;version=Hapmap2;RS=rs823072967;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173351780	173351879	.	+	.	Name=Starch;B73v2_pos=8:166824889;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173356029	173356128	.	+	.	Name=Starch;B73v2_pos=8:166831383;1allele=G/C;version=Hapmap2;RS=rs814586933;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	173356029	173356128	.	+	.	Name=Ear_height;B73v2_pos=8:166831383;1allele=G/C;version=Hapmap2;RS=rs814586933;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	173356029	173356128	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:166831383;1allele=G/C;version=Hapmap2;RS=rs814586933;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	173357819	173357918	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:166833173;1allele=A/C;version=Hapmap2;RS=rs837090888;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	173357819	173357918	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166833173;1allele=A/C;version=Hapmap2;RS=rs837090888;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	173357962	173358061	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166833316;1allele=G/A;version=Hapmap2;RS=rs802652307;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	173358300	173358399	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:166833654;1allele=G/T;version=Hapmap2;RS=rs850013165;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	173360179	173360278	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166835533;1allele=A/G;version=Hapmap2;RS=rs130924458;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	173361272	173361371	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:166836626;1allele=T/C;version=Hapmap2;RS=rs832107557;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173395212	173395311	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166874011;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173423444	173423543	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166900460;1allele=C/G;version=Hapmap2;RS=rs1063679418;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	173425772	173425871	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166902788;1allele=G/A;version=Hapmap2;RS=rs132507963;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173435885	173435984	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166912900;1allele=G/C;version=Hapmap2;RS=rs132507903;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173436327	173436426	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:166913342;1allele=C/T;version=Hapmap2;RS=rs132507889;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173441675	173441774	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166918690;1allele=C/A;version=Hapmap2;RS=rs1061410134;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	173441844	173441943	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166918859;1allele=T/G;version=Hapmap2;RS=rs1061686602;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	173441878	173441977	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:166918893;1allele=A/G;version=Hapmap2;RS=rs278612413;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	173530339	173530438	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:167004358;1allele=C/T;version=Hapmap2;RS=rs841241574;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173539756	173539855	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167013775;1allele=T/C;version=Hapmap2;RS=rs278612538;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173545020	173545119	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:167019039;1allele=G/A;version=Hapmap2;RS=rs130924904;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173609729	173609828	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:167085082;1allele=T/C;version=Hapmap2;RS=rs804017921;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173611538	173611637	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:167086891;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173613083	173613182	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:167088349;1allele=C/T;version=Hapmap2;RS=rs130925039;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173675127	173675226	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:167145345;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173675738	173675837	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:167145956;1allele=G/A;version=Hapmap1;RS=rs130925308;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	173683639	173683738	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:167153856;1allele=T/C;version=Hapmap2;RS=rs813071203;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173689986	173690085	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167159875;1allele=C/A;version=Hapmap2;RS=rs833356914;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	173725792	173725891	.	+	.	Name=Stalk_strength;B73v2_pos=8:167182540;1allele=C/A;version=Hapmap2;RS=rs819052908;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	173740601	173740700	.	+	.	Name=Ear_row_number;B73v2_pos=8:167196300;1allele=G/A;version=Hapmap2;RS=rs1061284784;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173751437	173751536	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:167229430;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173783019	173783118	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:167254887;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173783347	173783446	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:167255215;1allele=C/T;version=Hapmap2;RS=rs819755061;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173795433	173795532	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:167267301;1allele=G/A;version=Hapmap2;RS=rs278613079;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173810961	173811060	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167282828;1allele=A/G;version=Hapmap2;RS=rs130925623;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	173814895	173814994	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:167286762;1allele=/ACGCTA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173827357	173827456	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:167299059;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173907811	173907910	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:167380259;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173910952	173911051	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167383400;1allele=T/C;version=Hapmap1;RS=rs132508764;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	173911291	173911390	.	+	.	Name=Nitrate;B73v2_pos=8:167383739;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173911705	173911804	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167384153;1allele=G/A;version=Hapmap2;RS=rs806494781;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	173911732	173911831	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167384180;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	173917176	173917275	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:167389624;1allele=G/C;version=Hapmap2;RS=rs847834381;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	173950709	173950808	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167421723;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174095048	174095147	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167557932;1allele=G/T;version=Hapmap2;RS=rs130926017;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	174117791	174117890	.	+	.	Name=Stalk_strength;B73v2_pos=8:167605510;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174117791	174117890	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167605510;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174139016	174139115	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:205915306;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174139016	174139115	.	+	.	Name=Days_to_silk;B73v2_pos=2:205915306;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174174011	174174110	.	+	.	Name=Stalk_strength;B73v2_pos=8:167637237;1allele=T/A;version=Hapmap2;RS=rs842838908;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	174308038	174308137	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167778720;1allele=G/A;version=Hapmap1;RS=rs725677387;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	174309028	174309127	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:167779710;1allele=A/T;version=Hapmap2;RS=rs132509351;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	174523219	174523318	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:167989596;1allele=A/T;version=Hapmap2;RS=rs130926755;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	174533788	174533887	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168000166;1allele=T/C;version=Hapmap2;RS=rs132509513;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	174542554	174542653	.	+	.	Name=Plant_height;B73v2_pos=8:168008930;1allele=A/T;version=Hapmap2;RS=rs807794046;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	174550532	174550631	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:168016908;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174551173	174551272	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:168017549;1allele=A/T;version=Hapmap2;RS=rs1064032402;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	174552573	174552672	.	+	.	Name=Ear_row_number;B73v2_pos=8:168018949;1allele=G/C;version=Hapmap2;RS=rs132509638;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	174603903	174604002	.	+	.	Name=Nodes_per_plant;B73v2_pos=1:177523336;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174659945	174660044	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:168076648;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174660147	174660246	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:168076446;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174686898	174686997	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168153898;1allele=A/G;version=Hapmap2;RS=rs846552939;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	174699839	174699938	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:168166840;1allele=A/G;version=Hapmap2;RS=rs130927085;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	174700141	174700240	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:168167142;1allele=T/C;version=Hapmap2;RS=rs130927084;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	174700141	174700240	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:168167142;1allele=T/C;version=Hapmap2;RS=rs130927084;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	174709690	174709789	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168176691;1allele=G/A;version=Hapmap2;RS=rs132509770;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	174746691	174746790	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168213507;1allele=G/C;version=Hapmap2;RS=rs813892951;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	174748530	174748629	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168215346;1allele=A/G;version=Hapmap2;RS=rs842876731;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	174749509	174749608	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168216325;1allele=A/T;version=Hapmap2;RS=rs725285130;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	174765023	174765122	.	+	.	Name=Nitrate;B73v2_pos=8:168231821;1allele=C/T;version=Hapmap2;RS=rs807225878;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	174768414	174768513	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168235213;1allele=T/C;version=Hapmap2;RS=rs841735938;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	174781884	174781983	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:168248687;1allele=G/C;version=Hapmap2;RS=rs826653934;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	174808123	174808222	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168274931;1allele=C/T;version=Hapmap2;RS=rs132509882;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	174813430	174813529	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168280238;1allele=G/A;version=Hapmap2;RS=rs278614345;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	174817239	174817338	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168284045;1allele=G/C;version=Hapmap2;RS=rs724565531;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	174819433	174819532	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:168286239;1allele=+/-;version=Hapmap2;RS=rs827343819;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	174824326	174824425	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:168291132;1allele=T/C;version=Hapmap2;RS=rs804398288;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	174824849	174824948	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:168291655;1allele=C/T;version=Hapmap2;RS=rs812484162;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	174854173	174854272	.	+	.	Name=Nitrate;B73v2_pos=8:168321352;1allele=T/C;version=Hapmap2;RS=rs823839125;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	174862744	174862843	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168330530;1allele=T/C;version=Hapmap2;RS=rs811039701;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	174970435	174970534	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168438931;1allele=C/T;version=Hapmap2;RS=rs818625625;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	174973189	174973288	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168447726;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174973467	174973566	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168448004;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	174990199	174990298	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168469797;1allele=C/T;version=Hapmap2;RS=rs822306598;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175002815	175002914	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:168482413;1allele=/CTCC;version=Hapmap1;RS=rs816158505;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	175011979	175012078	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168492399;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175021095	175021194	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168501515;1allele=G/A;version=Hapmap2;RS=rs810331419;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	175144738	175144837	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168625161;1allele=C/T;version=Hapmap2;RS=rs814247043;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175177324	175177423	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168658231;1allele=G/A;version=Hapmap2;RS=rs278614762;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	175213445	175213544	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168692171;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175224626	175224725	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168788857;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175245017	175245116	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168745170;1allele=C/T;version=Hapmap2;RS=rs278614797;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175254211	175254310	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168754369;1allele=T/C;version=Hapmap1;RS=rs130928110;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	175256415	175256514	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168756573;1allele=A/G;version=Hapmap1;RS=rs132510417;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175320230	175320329	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168823664;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175323273	175323372	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168826707;1allele=A/C;version=Hapmap2;RS=rs130928059;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	175331644	175331743	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168833584;1allele=C/T;version=Hapmap2;RS=rs833726803;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175364880	175364979	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168867482;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175401505	175401604	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:168916542;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175401514	175401613	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:168916551;1allele=C/A;version=Hapmap2;RS=rs828590116;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	175403129	175403228	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:168918166;1allele=T/A;version=Hapmap1;RS=rs132510610;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175403129	175403228	.	+	.	Name=Ear_height;B73v2_pos=8:168918166;1allele=T/A;version=Hapmap1;RS=rs132510610;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175406003	175406102	.	+	.	Name=Nitrate;B73v2_pos=8:168921040;1allele=A/T;version=Hapmap2;RS=rs848854525;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	175408446	175408545	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:168923483;1allele=G/C;version=Hapmap1;RS=rs132510645;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175408869	175408968	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168923906;1allele=C/G;version=Hapmap2;RS=rs1061124885;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175409694	175409793	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:168924731;1allele=/GAGG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175411435	175411534	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168926472;1allele=C/T;version=Hapmap2;RS=rs1064782981;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175414298	175414397	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168929337;1allele=C/T;version=Hapmap2;RS=rs278614985;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175417707	175417806	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:168932746;1allele=G/T;version=Hapmap2;RS=rs826890732;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	175424531	175424630	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:168939570;1allele=T/G;version=Hapmap2;RS=rs278615056;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	175424655	175424754	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:168939694;1allele=T/G;version=Hapmap2;RS=rs278615058;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	175424703	175424802	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:168939742;1allele=T/C;version=Hapmap2;RS=rs130928343;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175424875	175424974	.	+	.	Name=Ear_row_number;B73v2_pos=8:168939914;1allele=A/T;version=Hapmap1;RS=rs130928346;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	175424927	175425026	.	+	.	Name=Ear_row_number;B73v2_pos=8:168939966;1allele=GCG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175428522	175428621	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:168943561;1allele=C/G;version=Hapmap2;RS=rs849783661;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	175430119	175430218	.	+	.	Name=Ear_height;B73v2_pos=8:168945158;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175430699	175430782	.	+	.	Name=Ear_row_number;B73v2_pos=8:168951243;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175435598	175435697	.	+	.	Name=Ear_row_number;B73v2_pos=8:168956158;1allele=C/T;version=Hapmap2;RS=rs725381168;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175488653	175488752	.	+	.	Name=Plant_height;B73v2_pos=8:169012186;1allele=C/T;version=Hapmap2;RS=rs805643909;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175489894	175489993	.	+	.	Name=Starch;B73v2_pos=8:169013427;1allele=T/C;version=Hapmap2;RS=rs727405811;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175492690	175492789	.	+	.	Name=Sucrose;B73v2_pos=8:169016223;1allele=G/A;version=Hapmap2;RS=rs130928533;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	175549298	175549397	.	+	.	Name=Ear_height;B73v2_pos=8:169055506;1allele=G/A;version=Hapmap2;RS=rs848409215;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	175557016	175557115	.	+	.	Name=Ear_row_number;B73v2_pos=8:169063224;1allele=C/G;version=Hapmap2;RS=rs130928666;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175560459	175560558	.	+	.	Name=Ear_row_number;B73v2_pos=8:169066667;1allele=C/T;version=Hapmap2;RS=rs805437873;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175560520	175560619	.	+	.	Name=Ear_row_number;B73v2_pos=8:169066728;1allele=G/C;version=Hapmap2;RS=rs130928680;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	175566134	175566233	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:169072342;1allele=G/C;version=Hapmap2;RS=rs827189683;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175566134	175566233	.	+	.	Name=Ear_height;B73v2_pos=8:169072342;1allele=G/C;version=Hapmap2;RS=rs827189683;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175585141	175585240	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:169091461;1allele=/TGGAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175585147	175585246	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:169091467;1allele=A/T;version=Hapmap2;RS=rs820801702;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	175586473	175586572	.	+	.	Name=Ear_row_number;B73v2_pos=8:169092793;1allele=T/C;version=Hapmap2;RS=rs829790454;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175587421	175587520	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:169093739;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175605426	175605525	.	+	.	Name=Ear_height;B73v2_pos=8:169111751;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175609529	175609628	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169115942;1allele=G/C;version=Hapmap2;RS=rs132511330;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175618375	175618474	.	+	.	Name=Ear_height;B73v2_pos=8:169124770;1allele=T/C;version=Hapmap2;RS=rs825387772;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175621307	175621406	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:169127702;1allele=T/G;version=Hapmap2;RS=rs839693513;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	175638584	175638683	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:169145056;1allele=A/T;version=Hapmap2;RS=rs848319011;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	175638879	175638978	.	+	.	Name=Height_above_ear;B73v2_pos=8:169145351;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175675643	175675742	.	+	.	Name=Ear_row_number;B73v2_pos=8:169195234;1allele=C/T;version=Hapmap2;RS=rs1062355774;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	175724638	175724737	.	+	.	Name=Ear_height;B73v2_pos=8:169244653;1allele=T/A;version=Hapmap1;RS=rs724162056;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	175726220	175726319	.	+	.	Name=Ear_height;B73v2_pos=8:169246235;1allele=A/G;version=Hapmap2;RS=rs824861678;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	175733112	175733211	.	+	.	Name=Ear_height;B73v2_pos=8:169252620;1allele=A/G;version=Hapmap2;RS=rs132511709;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	175736817	175736916	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:169256325;1allele=-/+;version=Hapmap2;RS=rs841611081;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	175849404	175849503	.	+	.	Name=Ear_row_number;B73v2_pos=8:169401635;1allele=G/A;version=Hapmap2;RS=rs130929407;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	175869254	175869353	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169419910;1allele=TTC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175869393	175869492	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:169420049;1allele=C/G;version=Hapmap2;RS=rs130929294;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175871291	175871390	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:169421947;1allele=C/T;version=Hapmap2;RS=rs132511883;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175871291	175871390	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:169421947;1allele=C/T;version=Hapmap1;RS=rs132511883;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175873813	175873912	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:169424469;1allele=/TGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175873813	175873912	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169424469;1allele=/TGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175874232	175874331	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169424888;1allele=G/A;version=Hapmap2;RS=rs130929316;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	175874232	175874331	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:169424888;1allele=G/A;version=Hapmap2;RS=rs130929316;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	175874470	175874569	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169425126;1allele=G/A;version=Hapmap2;RS=rs130929321;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	175875277	175875376	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169425933;1allele=C/G;version=Hapmap2;RS=rs278615860;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	175875444	175875543	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:169426100;1allele=A/T;version=Hapmap2;RS=rs850432711;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	175875494	175875593	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169426150;1allele=A/G;version=Hapmap2;RS=rs130929334;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	175923004	175923103	.	+	.	Name=Height_above_ear;B73v2_pos=8:169472092;1allele=C/T;version=Hapmap2;RS=rs832832204;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	175954465	175954564	.	+	.	Name=Ear_row_number;B73v2_pos=8:169503553;1allele=C/A;version=Hapmap2;RS=rs132512038;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	175968945	175969044	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:169518033;1allele=A/T;version=Hapmap2;RS=rs278615993;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	175969203	175969302	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:169518291;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	175973625	175973724	.	+	.	Name=Ear_row_number;B73v2_pos=8:169522713;1allele=A/G;version=Hapmap2;RS=rs278616013;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	175974239	175974338	.	+	.	Name=Ear_row_number;B73v2_pos=8:169523327;1allele=C/A;version=Hapmap2;RS=rs847312427;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	175984227	175984326	.	+	.	Name=Ear_row_number;B73v2_pos=8:169533315;1allele=A/C;version=Hapmap1;RS=rs130929754;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	175984713	175984812	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:169533801;1allele=G/A;version=Hapmap1;RS=rs818333753;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176034583	176034682	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169622905;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176035371	176035470	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169623693;1allele=G/A;version=Hapmap2;RS=rs808940625;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176105633	176105732	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:169659163;1allele=A/G;version=Hapmap2;RS=rs846141281;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	176109259	176109358	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:169662789;1allele=A/G;version=Hapmap2;RS=rs842657194;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	176224662	176224761	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:169783776;1allele=C/T;version=Hapmap2;RS=rs843150738;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176300087	176300186	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:169862714;1allele=G/A;version=Hapmap1;RS=rs132512676;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176324448	176324547	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:169887079;1allele=A/G;version=Hapmap2;RS=rs815473248;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176337253	176337352	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:169899884;1allele=T/A;version=Hapmap2;RS=rs130930613;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	176340791	176340890	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:169903422;1allele=G/A;version=Hapmap2;RS=rs813198187;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	176344937	176345036	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:169907568;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176350363	176350462	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:169912994;1allele=G/A;version=Hapmap2;RS=rs726545786;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176350367	176350466	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:169912998;1allele=C/T;version=Hapmap2;RS=rs813871806;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176433331	176433430	.	+	.	Name=Ear_row_number;B73v2_pos=8:169996326;1allele=C/T;version=Hapmap2;RS=rs132512990;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	176435615	176435714	.	+	.	Name=Ear_height;B73v2_pos=8:169998610;1allele=C/G;version=Hapmap2;RS=rs832941848;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	176499178	176499277	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:170018294;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176499273	176499372	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:170018199;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176525809	176525908	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:170037393;1allele=G/C;version=Hapmap1;RS=rs132513058;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	176542618	176542717	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:170054202;1allele=A/T;version=Hapmap2;RS=rs833252459;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	176544557	176544656	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:170056141;1allele=A/G;version=Hapmap2;RS=rs847933816;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	176547506	176547605	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:170059090;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176550126	176550225	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:170061710;1allele=T/G;version=Hapmap2;RS=rs278617128;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	176574585	176574684	.	+	.	Name=Ear_row_number;B73v2_pos=8:170085776;1allele=C/A;version=Hapmap2;RS=rs278617132;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	176587167	176587266	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:170098358;1allele=A/G;version=Hapmap2;RS=rs843486674;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	176587800	176587899	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170098991;1allele=A/G;version=Hapmap2;RS=rs804385631;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	176601363	176601462	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170112554;1allele=C/T;version=Hapmap2;RS=rs831597768;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176626818	176626917	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170138009;1allele=T/C;version=Hapmap2;RS=rs842822797;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	176628493	176628592	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170139684;1allele=CG/;version=Hapmap1;RS=rs832370843;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	176651465	176651564	.	+	.	Name=Ear_height;B73v2_pos=8:170162657;1allele=C/G;version=Hapmap2;RS=rs833180261;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	176651802	176651901	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:170162994;1allele=A/G;version=Hapmap2;RS=rs832079497;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	176652003	176652102	.	+	.	Name=Ear_height;B73v2_pos=8:170163195;1allele=T/C;version=Hapmap2;RS=rs806601515;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	176652546	176652645	.	+	.	Name=Plant_height;B73v2_pos=8:170163738;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176677330	176677429	.	+	.	Name=Ear_row_number;B73v2_pos=8:170188529;1allele=T/C;version=Hapmap2;RS=rs130931484;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176697867	176697966	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170209067;1allele=C/T;version=Hapmap2;RS=rs130931543;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176697884	176697983	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170209084;1allele=G/A;version=Hapmap2;RS=rs834002514;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176704783	176704882	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170215983;1allele=C/T;version=Hapmap2;RS=rs801527449;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176706464	176706563	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170217665;1allele=A/C;version=Hapmap1;RS=rs132513859;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	176706522	176706621	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170217723;1allele=/TGCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176706884	176706983	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170218085;1allele=G/A;version=Hapmap2;RS=rs132513874;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176707025	176707124	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170218226;1allele=G/A;version=Hapmap2;RS=rs828896567;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176715528	176715627	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170226729;1allele=A/C;version=Hapmap2;RS=rs844786367;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	176715915	176716014	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:170227116;1allele=C/A;version=Hapmap2;RS=rs132513951;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	176733021	176733120	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:170244163;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176733317	176733416	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:170244459;1allele=A/G;version=Hapmap2;RS=rs278617497;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	176778901	176779000	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170290049;1allele=T/C;version=Hapmap2;RS=rs845494193;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	176784778	176784877	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170295927;1allele=C/T;version=Hapmap1;RS=rs845390071;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176784778	176784877	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:170295927;1allele=C/T;version=Hapmap1;RS=rs845390071;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176811802	176811901	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:170315266;1allele=T/C;version=Hapmap2;RS=rs828799729;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	176833393	176833492	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170336857;1allele=C/T;version=Hapmap1;RS=rs132514294;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176836943	176837042	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:170340347;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176837438	176837537	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170340842;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176855488	176855587	.	+	.	Name=Starch;B73v2_pos=8:170359053;1allele=C/T;version=Hapmap2;RS=rs278617866;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	176881698	176881797	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170384367;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176950267	176950366	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170446829;1allele=G/A;version=Hapmap2;RS=rs132514559;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176950267	176950366	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170446829;1allele=G/A;version=Hapmap1;RS=rs132514559;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	176950412	176950511	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=8:170446974;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	176963789	176963888	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:170460359;1allele=A/T;version=Hapmap2;RS=rs831877920;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	177125301	177125400	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:170629693;1allele=/TGAAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	177127812	177127911	.	+	.	Name=Plant_height;B73v2_pos=8:170632204;1allele=T/G;version=Hapmap2;RS=rs807243561;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	177144646	177144745	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:170648397;1allele=C/G;version=Hapmap2;RS=rs130932784;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	177146574	177146673	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=8:170650325;1allele=G/T;version=Hapmap2;RS=rs278618329;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	177188899	177188998	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:170707675;1allele=G/A;version=Hapmap2;RS=rs802792451;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	177274041	177274140	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170777813;1allele=C/G;version=Hapmap1;RS=rs132515029;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	177301852	177301951	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170805614;1allele=C/G;version=Hapmap2;RS=rs830821414;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	177301857	177301956	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170805619;1allele=T/A;version=Hapmap2;RS=rs842440415;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	177301902	177302001	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:170805664;1allele=A/T;version=Hapmap2;RS=rs828413924;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	177304864	177304963	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170808626;1allele=A/G;version=Hapmap2;RS=rs816851112;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	177314528	177314627	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:170818325;1allele=A/T;version=Hapmap2;RS=rs832091446;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	177316120	177316219	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:170819917;1allele=C/G;version=Hapmap1;RS=rs130933224;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	177497807	177497906	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:171000060;1allele=A/C;version=Hapmap2;RS=rs806723232;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	177514455	177514554	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171016710;1allele=A/C;version=Hapmap1;RS=rs131179858;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	177535298	177535397	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171037469;1allele=C/T;version=Hapmap1;RS=rs132515569;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	177727153	177727252	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171212795;1allele=C/G;version=Hapmap2;RS=rs846064719;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	177727185	177727284	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171212827;1allele=A/G;version=Hapmap2;RS=rs842048256;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	177731903	177732002	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171217542;1allele=C/T;version=Hapmap1;RS=rs132515945;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	177731913	177732012	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171217552;1allele=C/T;version=Hapmap1;RS=rs132515946;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	177762256	177762355	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171289970;1allele=G/A;version=Hapmap2;RS=rs1061943032;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	177762257	177762356	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171289971;1allele=A/G;version=Hapmap2;RS=rs1064686007;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	177764648	177764747	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171292281;1allele=T/A;version=Hapmap2;RS=rs846724647;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	177769290	177769389	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:171296923;1allele=T/C;version=Hapmap2;RS=rs130934207;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	177833757	177833856	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171329729;1allele=T/C;version=Hapmap2;RS=rs130934326;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	177838566	177838665	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171334536;1allele=A/G;version=Hapmap2;RS=rs822954497;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	177893834	177893933	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171396020;1allele=C/T;version=Hapmap2;RS=rs839618752;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	177898227	177898326	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171400413;1allele=C/T;version=Hapmap2;RS=rs825493578;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	177902413	177902512	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171404599;1allele=G/A;version=Hapmap2;RS=rs818595887;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	177949986	177950085	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171452421;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	177991142	177991241	.	+	.	Name=Sucrose;B73v2_pos=8:171493301;1allele=G/A;version=Hapmap2;RS=rs844499340;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	177999208	177999307	.	+	.	Name=Starch;B73v2_pos=8:171501367;1allele=A/T;version=Hapmap2;RS=rs808664031;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	177999208	177999307	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171501367;1allele=A/T;version=Hapmap2;RS=rs808664031;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	178032430	178032529	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171534590;1allele=T/C;version=Hapmap2;RS=rs850101754;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178032433	178032532	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171534593;1allele=T/C;version=Hapmap2;RS=rs806100413;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178040044	178040143	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:171542204;1allele=C/A;version=Hapmap2;RS=rs278619993;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	178040071	178040170	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:171542231;1allele=G/C;version=Hapmap2;RS=rs130934941;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	178059276	178059375	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171561436;1allele=G/A;version=Hapmap2;RS=rs278620037;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178064013	178064112	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171566173;1allele=A/G;version=Hapmap2;RS=rs824222560;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	178064232	178064331	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171566392;1allele=C/G;version=Hapmap2;RS=rs726135061;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	178081445	178081544	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:171582402;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178083594	178083693	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171584551;1allele=G/T;version=Hapmap2;RS=rs1063054086;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	178084587	178084686	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171585544;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178084598	178084697	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171585555;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178085165	178085264	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171586122;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178085825	178085924	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171586782;1allele=A/G;version=Hapmap2;RS=rs130935170;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178087382	178087481	.	+	.	Name=Starch;B73v2_pos=8:171588339;1allele=A/T;version=Hapmap2;RS=rs813723324;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	178092984	178093083	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171593941;1allele=C/T;version=Hapmap2;RS=rs725192776;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178114494	178114593	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171613905;1allele=/TGCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178116050	178116149	.	+	.	Name=Days_to_silk;B73v2_pos=8:171615461;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178116310	178116409	.	+	.	Name=Starch;B73v2_pos=8:171615721;1allele=C/A;version=Hapmap2;RS=rs838346009;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	178116316	178116415	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171615727;1allele=C/T;version=Hapmap2;RS=rs278620301;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178117817	178117916	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171617228;1allele=G/C;version=Hapmap1;RS=rs132517057;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	178118548	178118647	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:171617959;1allele=A/G;version=Hapmap2;RS=rs132517084;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	178118605	178118704	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:171618016;1allele=G/C;version=Hapmap2;RS=rs132517090;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	178121318	178121417	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171620729;1allele=C/G;version=Hapmap2;RS=rs844073875;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	178121970	178122069	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171621381;1allele=T/C;version=Hapmap2;RS=rs130935387;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178123922	178124021	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:171623333;1allele=A/G;version=Hapmap2;RS=rs278620324;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178124056	178124155	.	+	.	Name=Days_to_silk;B73v2_pos=8:171623467;1allele=T/C;version=Hapmap2;RS=rs819059725;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178126800	178126899	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:171626211;1allele=A/G;version=Hapmap1;RS=rs130935415;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	178127196	178127295	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:171626607;1allele=C/G;version=Hapmap1;RS=rs130935422;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178134487	178134586	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171633898;1allele=A/G;version=Hapmap2;RS=rs130935448;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178135010	178135109	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171634421;1allele=A/G;version=Hapmap2;RS=rs278620349;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178135133	178135232	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171634544;1allele=C/G;version=Hapmap2;RS=rs278620352;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	178135146	178135245	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171634557;1allele=C/T;version=Hapmap2;RS=rs278620355;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178135991	178136090	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171635411;1allele=T/C;version=Hapmap2;RS=rs830134544;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178136319	178136418	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171635739;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178145831	178145930	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171645251;1allele=C/G;version=Hapmap2;RS=rs132517386;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	178146219	178146318	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171645639;1allele=C/T;version=Hapmap1;RS=rs132517397;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178146219	178146318	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171645639;1allele=C/T;version=Hapmap1;RS=rs132517397;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178149082	178149181	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171648502;1allele=T/C;version=Hapmap2;RS=rs835945619;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178210665	178210764	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:171710014;1allele=T/C;version=Hapmap2;RS=rs724665988;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178212094	178212193	.	+	.	Name=Height_above_ear;B73v2_pos=8:171711443;1allele=T/G;version=Hapmap1;RS=rs130935676;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	178213063	178213162	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171712412;1allele=A/C;version=Hapmap2;RS=rs132517643;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	178226065	178226164	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171725432;1allele=A/G;version=Hapmap2;RS=rs831350489;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178226078	178226177	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171725445;1allele=T/C;version=Hapmap2;RS=rs130935702;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178289305	178289404	.	+	.	Name=100_Kernel_weight;B73v2_pos=8:171754842;1allele=A/T;version=Hapmap2;RS=rs840472723;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	178309227	178309326	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171774764;1allele=A/T;version=Hapmap2;RS=rs847057785;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	178309584	178309683	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171775121;1allele=G/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178309845	178309944	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171775382;1allele=G/T;version=Hapmap2;RS=rs130935903;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	178313435	178313534	.	+	.	Name=Starch;B73v2_pos=8:171778972;1allele=C/T;version=Hapmap2;RS=rs130935920;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178317631	178317730	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171783168;1allele=G/T;version=Hapmap2;RS=rs130935948;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	178320816	178320915	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171786353;1allele=A/-;version=Hapmap1;RS=rs132517948;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	178321923	178322022	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171787460;1allele=C/T;version=Hapmap2;RS=rs1061338767;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178335170	178335269	.	+	.	Name=Total_amino_acids;B73v2_pos=8:171800640;1allele=G/A;version=Hapmap1;RS=rs132517987;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178338075	178338174	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:171803545;1allele=G/A;version=Hapmap2;RS=rs130936019;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178346555	178346654	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:171812025;1allele=T/C;version=Hapmap1;RS=rs828540970;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	178347142	178347241	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171812604;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178347956	178348055	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:171813418;1allele=A/G;version=Hapmap2;RS=rs842068107;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	178352789	178352888	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:171818251;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178388593	178388692	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:171854796;1allele=G/A;version=Hapmap2;RS=rs824340563;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178410447	178410546	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:171874418;1allele=A/G;version=Hapmap2;RS=rs808982708;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	178414922	178415021	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:171878893;1allele=G/A;version=Hapmap2;RS=rs803587428;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178500516	178500615	.	+	.	Name=Plant_height;B73v2_pos=8:171959197;1allele=-/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178500833	178500932	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=8:171959514;1allele=G/A;version=Hapmap2;RS=rs833466292;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	178530027	178530126	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171988712;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178530071	178530170	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:171988756;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178544668	178544767	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172003354;1allele=C/G;version=Hapmap2;RS=rs828284681;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	178544780	178544879	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172003466;1allele=T/A;version=Hapmap2;RS=rs819178761;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	178546941	178547040	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172005627;1allele=C/A;version=Hapmap2;RS=rs130936508;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	178564412	178564511	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172023097;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178569845	178569944	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:172028215;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	178571077	178571176	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:172029447;1allele=C/G;version=Hapmap1;RS=rs132518670;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	178802927	178803026	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172249157;1allele=T/C;version=Hapmap2;RS=rs132519000;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	178936425	178936524	.	+	.	Name=Ear_row_number;B73v2_pos=8:172372584;1allele=G/T;version=Hapmap2;RS=rs827238958;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	178979246	178979345	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=4:171644398;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179025716	179025815	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:172460311;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179053972	179054071	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172488573;1allele=G/A;version=Hapmap2;RS=rs130937481;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	179058321	179058420	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172492922;1allele=A/G;version=Hapmap1;RS=rs130937506;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	179058348	179058447	.	+	.	Name=Ear_row_number;B73v2_pos=8:172492949;1allele=C/G;version=Hapmap1;RS=rs130937507;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	179061455	179061554	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172496056;1allele=A/G;version=Hapmap2;RS=rs841802348;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179115642	179115741	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172549376;1allele=T/C;version=Hapmap2;RS=rs130937583;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	179172430	179172529	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172636680;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179244335	179244434	.	+	.	Name=Ear_row_number;B73v2_pos=8:172677305;1allele=C/T;version=Hapmap2;RS=rs132519603;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	179246158	179246257	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172679128;1allele=G/A;version=Hapmap2;RS=rs814227431;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	179249804	179249903	.	+	.	Name=Tassel_length;B73v2_pos=8:172682774;1allele=G/A;version=Hapmap2;RS=rs130937802;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179253039	179253138	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172686009;1allele=A/C;version=Hapmap2;RS=rs278621704;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	179253162	179253261	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172686132;1allele=T/C;version=Hapmap2;RS=rs132519618;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179254407	179254506	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172687377;1allele=A/T;version=Hapmap2;RS=rs130937835;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	179258010	179258109	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:172690984;1allele=A/C;version=Hapmap2;RS=rs278621715;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	179258025	179258124	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172690999;1allele=C/A;version=Hapmap2;RS=rs278621717;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	179264779	179264878	.	+	.	Name=Tassel_length;B73v2_pos=8:172697753;1allele=T/C;version=Hapmap2;RS=rs726154864;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	179271574	179271673	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:172704548;1allele=C/A;version=Hapmap2;RS=rs829275527;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179272176	179272275	.	+	.	Name=Starch;B73v2_pos=8:172705150;1allele=A/G;version=Hapmap2;RS=rs810746162;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179274993	179275092	.	+	.	Name=Starch;B73v2_pos=8:172707967;1allele=C/T;version=Hapmap2;RS=rs1061859059;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179309161	179309260	.	+	.	Name=Cob_diameter;B73v2_pos=8:172752104;1allele=T/C;version=Hapmap2;RS=rs827715893;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179312941	179313040	.	+	.	Name=Stalk_strength;B73v2_pos=8:172755884;1allele=G/C;version=Hapmap1;RS=rs132519753;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	179334117	179334216	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:172777059;1allele=G/A;version=Hapmap2;RS=rs825678372;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	179443196	179443295	.	+	.	Name=Tassel_length;B73v2_pos=8:172890083;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179457173	179457272	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:172904136;1allele=G/C;version=Hapmap2;RS=rs823198439;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	179459090	179459189	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:172906053;1allele=T/C;version=Hapmap2;RS=rs801869300;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	179500393	179500492	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:172949279;1allele=G/A;version=Hapmap2;RS=rs132519958;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	179531376	179531475	.	+	.	Name=Tassel_length;B73v2_pos=8:172992571;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179531535	179531634	.	+	.	Name=Cob_diameter;B73v2_pos=8:172992412;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179531535	179531634	.	+	.	Name=Tassel_length;B73v2_pos=8:172992412;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179535500	179535599	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172988447;1allele=-/C;version=Hapmap1;RS=rs132520226;2ref_allele=G;3alt_allele=GATT
chr8	Wallace_2014	SNP	179535697	179535796	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:172988250;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179536017	179536116	.	+	.	Name=Tassel_length;B73v2_pos=8:172987930;1allele=G/A;version=Hapmap2;RS=rs804079509;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	179553726	179553825	.	+	.	Name=Cob_diameter;B73v2_pos=8:173043304;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179555375	179555474	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:173041655;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179562694	179562793	.	+	.	Name=Tassel_length;B73v2_pos=8:173034336;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179564974	179565073	.	+	.	Name=Tassel_length;B73v2_pos=8:173032056;1allele=G/A;version=Hapmap2;RS=rs727386087;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	179586157	179586256	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173010686;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179587063	179587162	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173009780;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179587788	179587887	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173009055;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179589195	179589294	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173007648;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179606593	179606692	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173058887;1allele=C/G;version=Hapmap2;RS=rs821893293;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	179613614	179613713	.	+	.	Name=Tassel_length;B73v2_pos=8:173065908;1allele=C/G;version=Hapmap2;RS=rs1061685396;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	179615714	179615813	.	+	.	Name=Starch;B73v2_pos=8:173068008;1allele=G/T;version=Hapmap2;RS=rs832967444;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	179624997	179625096	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173077291;1allele=C/A;version=Hapmap2;RS=rs828772209;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	179626711	179626810	.	+	.	Name=Tassel_length;B73v2_pos=8:173079005;1allele=G/C;version=Hapmap2;RS=rs830612578;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	179634946	179635045	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173087240;1allele=G/A;version=Hapmap2;RS=rs130938943;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179665550	179665649	.	+	.	Name=Tassel_length;B73v2_pos=8:173117804;1allele=G/A;version=Hapmap2;RS=rs130939200;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179665581	179665680	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173117835;1allele=C/A;version=Hapmap2;RS=rs130939201;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	179666274	179666373	.	+	.	Name=Cob_diameter;B73v2_pos=8:173118528;1allele=C/G;version=Hapmap1;RS=rs823472874;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	179667049	179667148	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173119303;1allele=A/G;version=Hapmap2;RS=rs826262662;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179667115	179667214	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173119369;1allele=G/A;version=Hapmap2;RS=rs838012815;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179667396	179667495	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173119650;1allele=C/T;version=Hapmap2;RS=rs130939222;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179668767	179668866	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:173121021;1allele=T/A;version=Hapmap2;RS=rs833648614;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	179668779	179668878	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173121033;1allele=C/G;version=Hapmap2;RS=rs840151541;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	179669315	179669414	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173121569;1allele=G/C;version=Hapmap2;RS=rs278622737;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	179669352	179669451	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:173121606;1allele=T/G;version=Hapmap2;RS=rs849949146;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	179671579	179671678	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173123833;1allele=C/G;version=Hapmap2;RS=rs1062152196;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	179698900	179698999	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173242895;1allele=T/C;version=Hapmap2;RS=rs130939419;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179706550	179706649	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:173250545;1allele=A/T;version=Hapmap2;RS=rs804775292;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	179793893	179793992	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173218732;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179855945	179856044	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173306264;1allele=C/T;version=Hapmap2;RS=rs130939784;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	179857685	179857784	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173308004;1allele=G/C;version=Hapmap2;RS=rs130939794;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	179866856	179866955	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:173317175;1allele=A/C;version=Hapmap2;RS=rs840087900;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	179871345	179871444	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:173321664;1allele=T/C;version=Hapmap2;RS=rs810291583;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	179874752	179874851	.	+	.	Name=Tassel_length;B73v2_pos=8:173325071;1allele=G/A;version=Hapmap2;RS=rs278623087;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179888303	179888402	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:173338622;1allele=C/T;version=Hapmap2;RS=rs278623160;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179893936	179894035	.	+	.	Name=Tassel_length;B73v2_pos=8:173344255;1allele=C/G;version=Hapmap2;RS=rs278623199;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	179895204	179895303	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:173345523;1allele=A/G;version=Hapmap2;RS=rs807302130;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179895895	179895994	.	+	.	Name=Tassel_length;B73v2_pos=8:173346214;1allele=G/C;version=Hapmap2;RS=rs130940019;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	179899381	179899480	.	+	.	Name=Tassel_length;B73v2_pos=8:173349700;1allele=T/G;version=Hapmap2;RS=rs132520695;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	179900342	179900441	.	+	.	Name=Tassel_length;B73v2_pos=8:173350661;1allele=A/C;version=Hapmap2;RS=rs824109010;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	179916432	179916531	.	+	.	Name=Tassel_length;B73v2_pos=8:173368625;1allele=A/G;version=Hapmap2;RS=rs832242241;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	179917144	179917242	.	+	.	Name=Tassel_length;B73v2_pos=8:173369337;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179917144	179917242	.	+	.	Name=Cob_diameter;B73v2_pos=8:173369337;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	179935152	179935251	.	+	.	Name=Tassel_length;B73v2_pos=8:173387347;1allele=T/C;version=Hapmap2;RS=rs847634459;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179936210	179936309	.	+	.	Name=Tassel_length;B73v2_pos=8:173388405;1allele=A/G;version=Hapmap2;RS=rs825491513;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	179936652	179936751	.	+	.	Name=Tassel_length;B73v2_pos=8:173388847;1allele=A/G;version=Hapmap2;RS=rs130939687;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	179936892	179936991	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:173389087;1allele=T/C;version=Hapmap1;RS=rs132520575;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	179958674	179958773	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:173411833;1allele=T/C;version=Hapmap2;RS=rs278623361;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	179959108	179959207	.	+	.	Name=Tassel_length;B73v2_pos=8:173412267;1allele=C/A;version=Hapmap2;RS=rs816601760;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	179966740	179966839	.	+	.	Name=Cob_diameter;B73v2_pos=8:173419899;1allele=/GCCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	180028043	180028142	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=8:173547633;1allele=G/A;version=Hapmap2;RS=rs827960214;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180028675	180028774	.	+	.	Name=Cob_diameter;B73v2_pos=8:173548265;1allele=A/G;version=Hapmap2;RS=rs130940603;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180045995	180046094	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:173565585;1allele=G/A;version=Hapmap2;RS=rs132520957;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180088257	180088356	.	+	.	Name=Chlorophyll_A;B73v2_pos=8:173607847;1allele=T/A;version=Hapmap2;RS=rs809036141;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	180118994	180119093	.	+	.	Name=Tassel_length;B73v2_pos=8:173638582;1allele=G/A;version=Hapmap2;RS=rs1060766913;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	180119064	180119163	.	+	.	Name=Tassel_length;B73v2_pos=8:173638652;1allele=G/A;version=Hapmap2;RS=rs1063385319;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	180164287	180164386	.	+	.	Name=Tassel_length;B73v2_pos=8:173682689;1allele=G/A;version=Hapmap2;RS=rs1063796631;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	180164287	180164386	.	+	.	Name=Cob_diameter;B73v2_pos=8:173682689;1allele=G/A;version=Hapmap2;RS=rs1063796631;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	180191255	180191354	.	+	.	Name=Cob_diameter;B73v2_pos=8:173705172;1allele=G/A;version=Hapmap2;RS=rs278623866;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	180191255	180191354	.	+	.	Name=Total_amino_acids;B73v2_pos=8:173705172;1allele=G/A;version=Hapmap2;RS=rs278623866;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	180199549	180199648	.	+	.	Name=Total_amino_acids;B73v2_pos=8:173713467;1allele=T/A;version=Hapmap2;RS=rs130940984;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	180199636	180199735	.	+	.	Name=Cob_diameter;B73v2_pos=8:173713554;1allele=T/C;version=Hapmap2;RS=rs130940983;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	180199696	180199795	.	+	.	Name=Cob_diameter;B73v2_pos=8:173713614;1allele=A/T;version=Hapmap2;RS=rs130940981;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	180204733	180204832	.	+	.	Name=Cob_diameter;B73v2_pos=8:173718322;1allele=G/A;version=Hapmap2;RS=rs830125968;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	180205607	180205706	.	+	.	Name=Height_above_ear;B73v2_pos=8:173719190;1allele=C/G;version=Hapmap2;RS=rs132521354;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	180260296	180260395	.	+	.	Name=Cob_diameter;B73v2_pos=8:173764263;1allele=C/G;version=Hapmap2;RS=rs130941111;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	180299413	180299512	.	+	.	Name=Tassel_length;B73v2_pos=8:173800257;1allele=A/G;version=Hapmap2;RS=rs278624047;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180304386	180304485	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173804814;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	180306752	180306851	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:173807180;1allele=A/T;version=Hapmap2;RS=rs816832557;2ref_allele=A;3alt_allele=T
chr8	Wallace_2014	SNP	180316681	180316780	.	+	.	Name=Stalk_strength;B73v2_pos=8:173825230;1allele=-/+;version=Hapmap2;RS=rs812316146;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	180316982	180317081	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173825531;1allele=A/C;version=Hapmap2;RS=rs1061629308;2ref_allele=A;3alt_allele=C
chr8	Wallace_2014	SNP	180338620	180338719	.	+	.	Name=Cob_diameter;B73v2_pos=8:173846524;1allele=C/G;version=Hapmap2;RS=rs130941381;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	180343621	180343720	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173851525;1allele=TG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	180348004	180348103	.	+	.	Name=Cob_diameter;B73v2_pos=8:173855909;1allele=T/C;version=Hapmap2;RS=rs130941426;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	180375951	180376050	.	+	.	Name=Height_above_ear;B73v2_pos=8:173892261;1allele=G/C;version=Hapmap2;RS=rs828118773;2ref_allele=G;3alt_allele=C
chr8	Wallace_2014	SNP	180377100	180377199	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:173893410;1allele=G/T;version=Hapmap2;RS=rs820586192;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	180482074	180482173	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:173989749;1allele=A/G;version=Hapmap2;RS=rs846340862;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180486306	180486405	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:173993982;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	180552996	180553095	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:174060310;1allele=C/A;version=Hapmap2;RS=rs845184002;2ref_allele=C;3alt_allele=A
chr8	Wallace_2014	SNP	180553190	180553289	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:174060504;1allele=T/G;version=Hapmap2;RS=rs826190744;2ref_allele=T;3alt_allele=G
chr8	Wallace_2014	SNP	180558021	180558120	.	+	.	Name=Tassel_length;B73v2_pos=8:174065335;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	180671988	180672087	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:174179158;1allele=G/A;version=Hapmap2;RS=rs840987414;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180672466	180672565	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:174179636;1allele=C/T;version=Hapmap2;RS=rs816918113;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	180710325	180710424	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:174217214;1allele=T/C;version=Hapmap2;RS=rs850262680;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	180716325	180716424	.	+	.	Name=Tassel_length;B73v2_pos=8:174223214;1allele=A/C;version=Hapmap2;RS=rs278625053;2ref_allele=C;3alt_allele=G
chr8	Wallace_2014	SNP	180780498	180780597	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=8:174287407;1allele=A/T;version=Hapmap2;RS=rs130942442;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	180780498	180780597	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:174287407;1allele=A/T;version=Hapmap2;RS=rs130942442;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	180790013	180790112	.	+	.	Name=Tassel_length;B73v2_pos=8:174296922;1allele=T/-;version=Hapmap1;RS=rs132522425;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	180797265	180797364	.	+	.	Name=Nodes_above_ear;B73v2_pos=8:174304177;1allele=A/G;version=Hapmap2;RS=rs1062894072;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180807180	180807279	.	+	.	Name=Tassel_length;B73v2_pos=8:174313598;1allele=A/G;version=Hapmap2;RS=rs1063951383;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	180838265	180838364	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:174344685;1allele=C/T;version=Hapmap2;RS=rs830415054;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	180906408	180906507	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:174407229;1allele=G/T;version=Hapmap2;RS=rs829928435;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	180924702	180924801	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:174425522;1allele=G/T;version=Hapmap2;RS=rs278625480;2ref_allele=G;3alt_allele=T
chr8	Wallace_2014	SNP	180927692	180927791	.	+	.	Name=Tassel_length;B73v2_pos=8:174428512;1allele=T/C;version=Hapmap2;RS=rs278625493;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	180927825	180927924	.	+	.	Name=Tassel_length;B73v2_pos=8:174428645;1allele=T/C;version=Hapmap2;RS=rs130942926;2ref_allele=C;3alt_allele=T
chr8	Wallace_2014	SNP	181069618	181069717	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:174564527;1allele=T/C;version=Hapmap2;RS=rs809697408;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	181108370	181108469	.	+	.	Name=Tassel_length;B73v2_pos=8:174603678;1allele=C/T;version=Hapmap2;RS=rs827912361;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	181280963	181281062	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=8:174772395;1allele=T/A;version=Hapmap2;RS=rs834687798;2ref_allele=T;3alt_allele=A
chr8	Wallace_2014	SNP	181585008	181585107	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=8:175070061;1allele=G/A;version=Hapmap2;RS=rs130944479;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	181586599	181586698	.	+	.	Name=Plant_height;B73v2_pos=8:175071652;1allele=A/G;version=Hapmap2;RS=rs132523044;2ref_allele=A;3alt_allele=G
chr8	Wallace_2014	SNP	181728852	181728951	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:175219414;1allele=T/C;version=Hapmap2;RS=rs850181851;2ref_allele=T;3alt_allele=C
chr8	Wallace_2014	SNP	181754930	181755029	.	+	.	Name=Stalk_strength;B73v2_pos=8:175245572;1allele=G/A;version=Hapmap2;RS=rs843718795;2ref_allele=G;3alt_allele=A
chr8	Wallace_2014	SNP	181825127	181825226	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:175303803;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	181863857	181863956	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:175317276;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr8	Wallace_2014	SNP	181873915	181874014	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=8:175358916;1allele=A/G;version=Hapmap2;RS=rs824122736;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	1568765	1568864	.	+	.	Name=Ear_row_number;B73v2_pos=9:66131;1allele=G/A;version=Hapmap2;RS=rs811595028;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	1608603	1608702	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:127418;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	1615206	1615305	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:134023;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	1622587	1622686	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:141409;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	1673694	1673793	.	+	.	Name=Nitrate;B73v2_pos=9:52065;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	1685779	1685878	.	+	.	Name=Stalk_strength;B73v2_pos=9:177369;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	1748641	1748740	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:279218;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	1756474	1756573	.	+	.	Name=Ear_row_number;B73v2_pos=9:212547;1allele=T/C;version=Hapmap2;RS=rs278627681;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	1759856	1759955	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:215929;1allele=T/G;version=Hapmap2;RS=rs840361994;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	1787269	1787368	.	+	.	Name=Leaf_width;B73v2_pos=5:28610677;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	1951172	1951271	.	+	.	Name=Stalk_strength;B73v2_pos=9:468975;1allele=A/G;version=Hapmap2;RS=rs827187781;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	2025240	2025339	.	+	.	Name=Stalk_strength;B73v2_pos=9:532993;1allele=C/T;version=Hapmap2;RS=rs811686153;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	2025241	2025340	.	+	.	Name=Stalk_strength;B73v2_pos=9:532994;1allele=T/A;version=Hapmap2;RS=rs815742784;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	2207505	2207604	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:708456;1allele=A/G;version=Hapmap2;RS=rs820209365;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	2245199	2245298	.	+	.	Name=Nitrate;B73v2_pos=9:762617;1allele=A/G;version=Hapmap2;RS=rs848082835;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	2315587	2315686	.	+	.	Name=Nitrate;B73v2_pos=9:888440;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	2469621	2469720	.	+	.	Name=Nitrate;B73v2_pos=9:1069863;1allele=G/A;version=Hapmap2;RS=rs839048042;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	2475176	2475274	.	+	.	Name=Nitrate;B73v2_pos=9:1075244;1allele=+/-;version=Hapmap2;RS=rs824332527;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	2497680	2497779	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:1094514;1allele=G/A;version=Hapmap2;RS=rs821626181;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	2558661	2558760	.	+	.	Name=Nitrate;B73v2_pos=9:1155501;1allele=G/A;version=Hapmap2;RS=rs841223156;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	2612266	2612365	.	+	.	Name=Nitrate;B73v2_pos=9:1209791;1allele=C/T;version=Hapmap2;RS=rs801471052;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	2618082	2618181	.	+	.	Name=Nitrate;B73v2_pos=9:1215607;1allele=C/T;version=Hapmap2;RS=rs812932898;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	2619580	2619679	.	+	.	Name=Nitrate;B73v2_pos=9:1217105;1allele=A/G;version=Hapmap2;RS=rs807234313;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	2623400	2623499	.	+	.	Name=Nitrate;B73v2_pos=9:1220925;1allele=G/A;version=Hapmap2;RS=rs727318514;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	2632570	2632669	.	+	.	Name=Nitrate;B73v2_pos=9:1230099;1allele=G/A;version=Hapmap2;RS=rs804380828;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	2662462	2662561	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:1260389;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	2691041	2691140	.	+	.	Name=Nitrate;B73v2_pos=9:1288095;1allele=T/G;version=Hapmap2;RS=rs806192754;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	3330215	3330314	.	+	.	Name=Fructose;B73v2_pos=9:1916366;1allele=C/T;version=Hapmap2;RS=rs838409998;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	3536099	3536198	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:2115010;1allele=T/C;version=Hapmap2;RS=rs804314512;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	3575288	3575387	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:2154140;1allele=G/A;version=Hapmap2;RS=rs845927294;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	3576028	3576127	.	+	.	Name=Fructose;B73v2_pos=9:2154880;1allele=G/A;version=Hapmap2;RS=rs832694646;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	3636330	3636429	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:2215185;1allele=G/A;version=Hapmap2;RS=rs843241137;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	3636831	3636930	.	+	.	Name=Days_to_silk;B73v2_pos=9:2215686;1allele=C/T;version=Hapmap2;RS=rs805807784;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	3638104	3638203	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:2216960;1allele=G/A;version=Hapmap2;RS=rs836895369;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	3821328	3821427	.	+	.	Name=Leaf_length;B73v2_pos=9:2457514;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	3821624	3821723	.	+	.	Name=Fructose;B73v2_pos=9:2457218;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	3864142	3864241	.	+	.	Name=Leaf_length;B73v2_pos=9:2401350;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	3865437	3865536	.	+	.	Name=Leaf_length;B73v2_pos=9:2400055;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	3870852	3870951	.	+	.	Name=Fructose;B73v2_pos=9:2420533;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	3888177	3888276	.	+	.	Name=Fructose;B73v2_pos=9:2470762;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	3905129	3905228	.	+	.	Name=Fructose;B73v2_pos=9:2475552;1allele=C/T;version=Hapmap2;RS=rs850496263;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	4110451	4110550	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:2713065;1allele=G/A;version=Hapmap1;RS=rs131690929;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	4111347	4111446	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:2713961;1allele=C/T;version=Hapmap1;RS=rs131690953;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	4111347	4111446	.	+	.	Name=Fructose;B73v2_pos=9:2713961;1allele=C/T;version=Hapmap1;RS=rs131690953;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	4111766	4111865	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:2714380;1allele=C/G;version=Hapmap2;RS=rs816891310;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	4144730	4144829	.	+	.	Name=Fructose;B73v2_pos=9:2729290;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4150479	4150578	.	+	.	Name=Leaf_length;B73v2_pos=9:2723542;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4151000	4151099	.	+	.	Name=Fructose;B73v2_pos=9:2723021;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4227857	4227956	.	+	.	Name=Fructose;B73v2_pos=9:2801994;1allele=G/A;version=Hapmap2;RS=rs831971286;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	4244496	4244595	.	+	.	Name=Fructose;B73v2_pos=9:2818633;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4245154	4245253	.	+	.	Name=Fructose;B73v2_pos=9:2819291;1allele=G/A;version=Hapmap2;RS=rs805222566;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	4297458	4297557	.	+	.	Name=Leaf_length;B73v2_pos=9:2880001;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4321900	4321998	.	+	.	Name=Fructose;B73v2_pos=9:2931664;1allele=G/T;version=Hapmap2;RS=rs849583872;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	4323605	4323704	.	+	.	Name=Fructose;B73v2_pos=9:2929958;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4348937	4349036	.	+	.	Name=Fructose;B73v2_pos=9:2904624;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4378955	4379054	.	+	.	Name=Fructose;B73v2_pos=9:2956522;1allele=G/A;version=Hapmap2;RS=rs806702762;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	4390194	4390293	.	+	.	Name=Fructose;B73v2_pos=9:2969595;1allele=C/T;version=Hapmap2;RS=rs801816917;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	4419506	4419605	.	+	.	Name=Fructose;B73v2_pos=9:3021736;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4445531	4445630	.	+	.	Name=Fructose;B73v2_pos=9:3049788;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4457634	4457733	.	+	.	Name=Fructose;B73v2_pos=9:3037691;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	4512841	4512940	.	+	.	Name=Fructose;B73v2_pos=9:3103046;1allele=G/A;version=Hapmap2;RS=rs831814490;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	4536540	4536639	.	+	.	Name=Fructose;B73v2_pos=9:3126745;1allele=C/A;version=Hapmap2;RS=rs823135895;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	4655992	4656091	.	+	.	Name=Fructose;B73v2_pos=9:3326729;1allele=A/G;version=Hapmap2;RS=rs828595175;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	4657521	4657620	.	+	.	Name=Fructose;B73v2_pos=9:3328258;1allele=T/C;version=Hapmap2;RS=rs830220540;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	4779035	4779134	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:3463037;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	5030174	5030273	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:3743828;1allele=A/C;version=Hapmap2;RS=rs131691734;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	5030174	5030273	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:3743828;1allele=A/C;version=Hapmap2;RS=rs131691734;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	5030219	5030318	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:3743873;1allele=/ACGGGT;version=Hapmap1;RS=rs1062546471;2ref_allele=GC;3alt_allele=G
chr9	Wallace_2014	SNP	5145144	5145243	.	+	.	Name=Cob_diameter;B73v2_pos=9:3857374;1allele=A/T;version=Hapmap2;RS=rs130952117;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	5278627	5278726	.	+	.	Name=Leaf_width;B73v2_pos=9:3989594;1allele=A/G;version=Hapmap2;RS=rs804132868;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	5370386	5370485	.	+	.	Name=Leaf_length;B73v2_pos=9:4081617;1allele=C/G;version=Hapmap2;RS=rs130952665;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	5409232	5409331	.	+	.	Name=Ear_row_number;B73v2_pos=9:4117933;1allele=A/T;version=Hapmap2;RS=rs130952725;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	5498465	5498564	.	+	.	Name=Ear_row_number;B73v2_pos=9:4207265;1allele=C/T;version=Hapmap2;RS=rs1064143900;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5498465	5498564	.	+	.	Name=Cob_diameter;B73v2_pos=9:4207265;1allele=C/T;version=Hapmap2;RS=rs1064143900;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5506319	5506418	.	+	.	Name=Ear_row_number;B73v2_pos=9:4215119;1allele=C/T;version=Hapmap2;RS=rs130953019;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5510039	5510138	.	+	.	Name=Ear_row_number;B73v2_pos=9:4218839;1allele=C/T;version=Hapmap2;RS=rs130953044;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5521939	5522038	.	+	.	Name=Cob_diameter;B73v2_pos=9:4230741;1allele=C/T;version=Hapmap2;RS=rs1062650771;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5567877	5567976	.	+	.	Name=Ear_row_number;B73v2_pos=9:4276679;1allele=G/A;version=Hapmap2;RS=rs278634507;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	5602328	5602427	.	+	.	Name=Ear_row_number;B73v2_pos=9:4311130;1allele=G/A;version=Hapmap2;RS=rs831846686;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	5602358	5602457	.	+	.	Name=Ear_row_number;B73v2_pos=9:4311160;1allele=A/G;version=Hapmap2;RS=rs840192505;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	5602633	5602732	.	+	.	Name=Cob_diameter;B73v2_pos=9:4311435;1allele=T/C;version=Hapmap2;RS=rs846688625;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	5602633	5602732	.	+	.	Name=Ear_row_number;B73v2_pos=9:4311435;1allele=T/C;version=Hapmap2;RS=rs846688625;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	5604029	5604128	.	+	.	Name=Cob_diameter;B73v2_pos=9:4312831;1allele=G/A;version=Hapmap2;RS=rs724177819;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	5604840	5604939	.	+	.	Name=Cob_diameter;B73v2_pos=9:4313642;1allele=C/T;version=Hapmap2;RS=rs828718470;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5605751	5605850	.	+	.	Name=Cob_diameter;B73v2_pos=9:4314553;1allele=C/T;version=Hapmap2;RS=rs827013294;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5606316	5606415	.	+	.	Name=Cob_diameter;B73v2_pos=9:4315118;1allele=C/G;version=Hapmap2;RS=rs822592455;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	5607743	5607842	.	+	.	Name=Cob_diameter;B73v2_pos=9:4316545;1allele=C/T;version=Hapmap2;RS=rs810071390;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5614462	5614561	.	+	.	Name=Cob_diameter;B73v2_pos=9:4323264;1allele=C/T;version=Hapmap2;RS=rs803686413;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5616485	5616584	.	+	.	Name=Cob_diameter;B73v2_pos=9:4325287;1allele=G/C;version=Hapmap2;RS=rs810679885;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	5629775	5629874	.	+	.	Name=Cob_diameter;B73v2_pos=9:4338577;1allele=C/T;version=Hapmap2;RS=rs130953614;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5631694	5631793	.	+	.	Name=Cob_diameter;B73v2_pos=9:4340496;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	5665010	5665109	.	+	.	Name=Cob_diameter;B73v2_pos=9:4373852;1allele=G/A;version=Hapmap2;RS=rs726050671;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	5675729	5675828	.	+	.	Name=Cob_diameter;B73v2_pos=9:4382989;1allele=G/T;version=Hapmap2;RS=rs726556274;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	5676801	5676900	.	+	.	Name=Cob_diameter;B73v2_pos=9:4384061;1allele=A/C;version=Hapmap2;RS=rs850495166;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	5677404	5677503	.	+	.	Name=Cob_diameter;B73v2_pos=9:4384664;1allele=T/C;version=Hapmap2;RS=rs130953716;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	5680074	5680173	.	+	.	Name=Cob_diameter;B73v2_pos=9:4387334;1allele=T/C;version=Hapmap2;RS=rs130953741;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	5684292	5684391	.	+	.	Name=Cob_diameter;B73v2_pos=9:4391552;1allele=C/T;version=Hapmap2;RS=rs130953817;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5684444	5684543	.	+	.	Name=Cob_diameter;B73v2_pos=9:4391704;1allele=G/T;version=Hapmap2;RS=rs278634953;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	5684584	5684683	.	+	.	Name=Cob_diameter;B73v2_pos=9:4391844;1allele=T/C;version=Hapmap2;RS=rs130953824;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	5685987	5686086	.	+	.	Name=Cob_diameter;B73v2_pos=9:4393247;1allele=C/T;version=Hapmap2;RS=rs130953844;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	5843968	5844067	.	+	.	Name=Ear_row_number;B73v2_pos=9:4548288;1allele=A/G;version=Hapmap2;RS=rs278635203;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	5878531	5878630	.	+	.	Name=Ear_row_number;B73v2_pos=9:4582851;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	5952215	5952314	.	+	.	Name=Glucose;B73v2_pos=9:4650728;1allele=A/G;version=Hapmap2;RS=rs1061527561;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	5952527	5952626	.	+	.	Name=Glucose;B73v2_pos=9:4651040;1allele=A/G;version=Hapmap2;RS=rs1063606833;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	6032139	6032238	.	+	.	Name=Ear_row_number;B73v2_pos=9:4774825;1allele=T/C;version=Hapmap2;RS=rs278635661;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	6042866	6042965	.	+	.	Name=Starch;B73v2_pos=9:4685000;1allele=C/T;version=Hapmap2;RS=rs820351490;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	6042866	6042965	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:4685000;1allele=C/T;version=Hapmap2;RS=rs820351490;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	6051607	6051706	.	+	.	Name=Ear_row_number;B73v2_pos=9:4743083;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	6052166	6052265	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:4742524;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	6146739	6146838	.	+	.	Name=Cob_diameter;B73v2_pos=9:4843332;1allele=A/G;version=Hapmap1;RS=rs130954666;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	6362003	6362102	.	+	.	Name=Ear_row_number;B73v2_pos=9:5046098;1allele=C/A;version=Hapmap2;RS=rs841418190;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	6546826	6546907	.	+	.	Name=Starch;B73v2_pos=9:5235584;1allele=A/C;version=Hapmap2;RS=rs842232584;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	6546826	6546907	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:5235584;1allele=A/C;version=Hapmap2;RS=rs842232584;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	6605868	6605967	.	+	.	Name=Starch;B73v2_pos=9:5286671;1allele=A/T;version=Hapmap2;RS=rs808880615;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	6609829	6609928	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:5290634;1allele=A/G;version=Hapmap2;RS=rs841918708;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	6776078	6776177	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:5455755;1allele=G/T;version=Hapmap2;RS=rs278636820;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	6791320	6791419	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:5515677;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	6791421	6791520	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:5515576;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	6855578	6855677	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:5527218;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	6917052	6917151	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:5587869;1allele=T/C;version=Hapmap2;RS=rs1064361467;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	6922371	6922470	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:5593188;1allele=C/T;version=Hapmap2;RS=rs130956406;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	6990595	6990694	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:5663880;1allele=T/C;version=Hapmap2;RS=rs1063632953;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	7020550	7020649	.	+	.	Name=Ear_height;B73v2_pos=9:5692339;1allele=C/T;version=Hapmap2;RS=rs278637246;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	7045339	7045438	.	+	.	Name=Ear_height;B73v2_pos=9:5717128;1allele=G/T;version=Hapmap2;RS=rs278637292;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	7046747	7046846	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:5718536;1allele=G/A;version=Hapmap2;RS=rs1061577742;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	7133730	7133829	.	+	.	Name=Ear_height;B73v2_pos=9:5788907;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	7237807	7237906	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:5920084;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	7300774	7300873	.	+	.	Name=Ear_height;B73v2_pos=9:5997452;1allele=A/G;version=Hapmap2;RS=rs131693690;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	7310399	7310498	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6006898;1allele=C/A;version=Hapmap1;RS=rs131693703;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	7310399	7310498	.	+	.	Name=Ear_height;B73v2_pos=9:6006898;1allele=C/A;version=Hapmap1;RS=rs131693703;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	7330781	7330880	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:6027650;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	7365454	7365553	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6061858;1allele=T/A;version=Hapmap2;RS=rs278637924;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	7365454	7365553	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:6061858;1allele=T/A;version=Hapmap2;RS=rs278637924;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	7366501	7366600	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6062905;1allele=A/G;version=Hapmap2;RS=rs278637954;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	7440043	7440142	.	+	.	Name=Southern_leaf_blight;B73v2_pos=1:78072871;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	7525572	7525671	.	+	.	Name=Cob_diameter;B73v2_pos=9:6219756;1allele=T/C;version=Hapmap2;RS=rs130957186;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	7529958	7530057	.	+	.	Name=Ear_height;B73v2_pos=9:6224142;1allele=T/C;version=Hapmap2;RS=rs1061530691;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	7566320	7566419	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6255547;1allele=G/A;version=Hapmap2;RS=rs1061025741;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	7579834	7579933	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:6269068;1allele=G/A;version=Hapmap2;RS=rs810855388;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	7672767	7672866	.	+	.	Name=Total_amino_acids;B73v2_pos=9:6354778;1allele=T/C;version=Hapmap2;RS=rs834533643;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	7800025	7800124	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6491643;1allele=G/A;version=Hapmap2;RS=rs131694109;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	7810177	7810276	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6501795;1allele=A/G;version=Hapmap2;RS=rs130957669;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	7810177	7810276	.	+	.	Name=Ear_height;B73v2_pos=9:6501795;1allele=A/G;version=Hapmap2;RS=rs130957669;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	7814055	7814154	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6505676;1allele=C/G;version=Hapmap2;RS=rs1061223588;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	7814055	7814154	.	+	.	Name=Ear_height;B73v2_pos=9:6505676;1allele=C/G;version=Hapmap2;RS=rs1061223588;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	7874441	7874540	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6563140;1allele=T/C;version=Hapmap2;RS=rs801496429;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	7879964	7880063	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6567967;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	7883038	7883137	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6571044;1allele=T/A;version=Hapmap2;RS=rs1064325779;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	7990339	7990438	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:6676069;1allele=A/C;version=Hapmap2;RS=rs130957845;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	8138125	8138224	.	+	.	Name=Total_amino_acids;B73v2_pos=9:6772430;1allele=T/A;version=Hapmap2;RS=rs844338461;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	8138175	8138274	.	+	.	Name=Total_amino_acids;B73v2_pos=9:6772380;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	8387969	8388068	.	+	.	Name=Ear_row_number;B73v2_pos=9:7138650;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	8408903	8409002	.	+	.	Name=Starch;B73v2_pos=9:7159588;1allele=T/C;version=Hapmap2;RS=rs803089587;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	8424093	8424192	.	+	.	Name=Glucose;B73v2_pos=9:7174778;1allele=T/C;version=Hapmap2;RS=rs130958582;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	8525563	8525662	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:7276167;1allele=+/-;version=Hapmap2;RS=rs1063426996;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	8525563	8525662	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:7276167;1allele=+/-;version=Hapmap2;RS=rs1063426996;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	8559705	8559804	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:7311164;1allele=C/T;version=Hapmap2;RS=rs130958876;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	8561971	8562070	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:7313430;1allele=A/G;version=Hapmap2;RS=rs130958894;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	8590270	8590369	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:7395827;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	8770029	8770128	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:7509754;1allele=A/G;version=Hapmap2;RS=rs1061954211;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	8915187	8915286	.	+	.	Name=Glucose;B73v2_pos=9:7617450;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	8971842	8971934	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:7724229;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	8971842	8971934	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:7724229;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	9034386	9034485	.	+	.	Name=Starch;B73v2_pos=9:7787187;1allele=A/G;version=Hapmap2;RS=rs805374243;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	9043982	9044081	.	+	.	Name=Starch;B73v2_pos=9:7796786;1allele=T/C;version=Hapmap2;RS=rs821429246;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	9049293	9049392	.	+	.	Name=Glucose;B73v2_pos=9:7802098;1allele=G/T;version=Hapmap2;RS=rs278641228;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	9092514	9092613	.	+	.	Name=Ear_row_number;B73v2_pos=9:7844567;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	9116559	9116658	.	+	.	Name=Glucose;B73v2_pos=9:7869105;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	9147433	9147531	.	+	.	Name=Glucose;B73v2_pos=9:7895623;1allele=A/G;version=Hapmap2;RS=rs803519282;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	9208436	9208535	.	+	.	Name=Tassel_length;B73v2_pos=9:7956001;1allele=C/T;version=Hapmap2;RS=rs131695257;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	9277499	9277598	.	+	.	Name=Total_amino_acids;B73v2_pos=9:8013604;1allele=A/G;version=Hapmap2;RS=rs278641871;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	9283918	9284017	.	+	.	Name=Glucose;B73v2_pos=9:8020023;1allele=A/T;version=Hapmap2;RS=rs812801604;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	9284466	9284565	.	+	.	Name=Starch;B73v2_pos=9:8020571;1allele=T/A;version=Hapmap2;RS=rs828273460;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	9285099	9285198	.	+	.	Name=Glucose;B73v2_pos=9:8021204;1allele=G/T;version=Hapmap2;RS=rs842255773;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	9285162	9285261	.	+	.	Name=Glucose;B73v2_pos=9:8021267;1allele=T/C;version=Hapmap2;RS=rs130960368;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	9417244	9417343	.	+	.	Name=Cob_diameter;B73v2_pos=9:8187198;1allele=A/T;version=Hapmap2;RS=rs847289351;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	9521081	9521180	.	+	.	Name=Cob_diameter;B73v2_pos=9:8281851;1allele=A/G;version=Hapmap2;RS=rs850270195;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	9856973	9857072	.	+	.	Name=Tassel_length;B73v2_pos=9:8519681;1allele=G/A;version=Hapmap2;RS=rs807433410;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	9941130	9941229	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:14893818;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	9961380	9961479	.	+	.	Name=Ear_height;B73v2_pos=9:8613838;1allele=G/A;version=Hapmap2;RS=rs130961698;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	10030427	10030526	.	+	.	Name=Ear_height;B73v2_pos=9:8683058;1allele=G/A;version=Hapmap2;RS=rs1061516728;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	10043948	10044047	.	+	.	Name=Starch;B73v2_pos=9:8696591;1allele=G/A;version=Hapmap2;RS=rs817559480;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	10153742	10153841	.	+	.	Name=Tassel_length;B73v2_pos=9:8802690;1allele=G/T;version=Hapmap2;RS=rs724300691;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	10157036	10157135	.	+	.	Name=Cob_diameter;B73v2_pos=9:8805984;1allele=C/T;version=Hapmap2;RS=rs836582791;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	10241239	10241338	.	+	.	Name=Starch;B73v2_pos=9:8893091;1allele=G/T;version=Hapmap2;RS=rs833996538;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	10298695	10298794	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:8950548;1allele=G/A;version=Hapmap2;RS=rs278643700;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	10316547	10316646	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:8968399;1allele=A/G;version=Hapmap2;RS=rs814777132;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	10350822	10350921	.	+	.	Name=Starch;B73v2_pos=9:9001423;1allele=T/A;version=Hapmap2;RS=rs813482039;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	10689514	10689613	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9313426;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10689523	10689622	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9313435;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10713874	10713973	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9337788;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10760774	10760873	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9383470;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10772946	10773045	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:9395642;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10775415	10775514	.	+	.	Name=Ear_height;B73v2_pos=9:9398111;1allele=C/T;version=Hapmap2;RS=rs1064392585;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	10789797	10789896	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:9415920;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10829809	10829908	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9448220;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10846626	10846725	.	+	.	Name=Ear_height;B73v2_pos=9:9465039;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10886643	10886742	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9511243;1allele=G/A;version=Hapmap2;RS=rs130962385;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	10900423	10900522	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9497461;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10925252	10925350	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9547440;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	10926910	10927009	.	+	.	Name=Ear_height;B73v2_pos=9:9545781;1allele=G/T;version=Hapmap2;RS=rs278645211;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	10929674	10929773	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9543016;1allele=G/A;version=Hapmap2;RS=rs842110343;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	10929908	10930007	.	+	.	Name=Ear_height;B73v2_pos=9:9542782;1allele=A/T;version=Hapmap2;RS=rs1062106007;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	10933902	10934001	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9538788;1allele=C/T;version=Hapmap2;RS=rs808984412;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	10933991	10934090	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:9538699;1allele=C/T;version=Hapmap2;RS=rs278645068;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	11054377	11054476	.	+	.	Name=Ear_height;B73v2_pos=9:9683431;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	11081152	11081251	.	+	.	Name=Glucose;B73v2_pos=9:9704058;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	11114985	11115084	.	+	.	Name=Glucose;B73v2_pos=9:9738562;1allele=G/A;version=Hapmap2;RS=rs816406967;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	11119450	11119549	.	+	.	Name=Total_amino_acids;B73v2_pos=9:9743027;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	11168676	11168775	.	+	.	Name=Tassel_length;B73v2_pos=9:9792166;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	11518922	11519021	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:10172821;1allele=A/G;version=Hapmap2;RS=rs831963811;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	11565824	11565923	.	+	.	Name=Glucose;B73v2_pos=9:10225904;1allele=A/G;version=Hapmap2;RS=rs805290983;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	11565824	11565923	.	+	.	Name=Fructose;B73v2_pos=9:10225904;1allele=A/G;version=Hapmap2;RS=rs805290983;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	11604078	11604177	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:10263495;1allele=A/G;version=Hapmap2;RS=rs807234356;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	11618806	11618905	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:10277923;1allele=A/G;version=Hapmap2;RS=rs817478234;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	11658745	11658844	.	+	.	Name=Fructose;B73v2_pos=9:10317770;1allele=A/G;version=Hapmap2;RS=rs1062860216;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	11660286	11660385	.	+	.	Name=Ear_height;B73v2_pos=9:10319273;1allele=G/C;version=Hapmap2;RS=rs833088295;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	11821520	11821619	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:10479672;1allele=G/A;version=Hapmap2;RS=rs844777464;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12010189	12010288	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:10658137;1allele=T/C;version=Hapmap2;RS=rs849844274;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	12113661	12113760	.	+	.	Name=Ear_height;B73v2_pos=9:10780750;1allele=G/A;version=Hapmap2;RS=rs130964207;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	12116314	12116413	.	+	.	Name=Ear_height;B73v2_pos=9:10783403;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12272105	12272204	.	+	.	Name=Height_above_ear;B73v2_pos=9:10942809;1allele=G/A;version=Hapmap1;RS=rs131697687;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	12272513	12272612	.	+	.	Name=Height_above_ear;B73v2_pos=9:10943217;1allele=C/T;version=Hapmap1;RS=rs131697679;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12320390	12320489	.	+	.	Name=Ear_height;B73v2_pos=9:10987781;1allele=A/G;version=Hapmap2;RS=rs804124670;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12349367	12349466	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11016759;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12362689	12362788	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11035279;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12362689	12362788	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11035279;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12375422	12375521	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:11044772;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12402274	12402373	.	+	.	Name=Ear_height;B73v2_pos=9:11073208;1allele=T/C;version=Hapmap1;RS=rs131697751;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	12499727	12499826	.	+	.	Name=Ear_height;B73v2_pos=9:11165937;1allele=A/T;version=Hapmap1;RS=rs130965020;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	12667037	12667136	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11396208;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12800201	12800300	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11456694;1allele=T/A;version=Hapmap2;RS=rs130965739;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	12809772	12809871	.	+	.	Name=Ear_height;B73v2_pos=9:11467658;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12849806	12849905	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11507898;1allele=A/G;version=Hapmap2;RS=rs818742234;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12851223	12851322	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11509315;1allele=T/C;version=Hapmap2;RS=rs278647871;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	12851505	12851604	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11509597;1allele=A/T;version=Hapmap2;RS=rs130965661;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	12851505	12851604	.	+	.	Name=Ear_height;B73v2_pos=9:11509597;1allele=A/T;version=Hapmap2;RS=rs130965661;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	12872273	12872372	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11529425;1allele=C/T;version=Hapmap2;RS=rs278647898;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	12872877	12872976	.	+	.	Name=Ear_height;B73v2_pos=9:11530029;1allele=C/G;version=Hapmap2;RS=rs827169197;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	12874019	12874118	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11531171;1allele=G/A;version=Hapmap2;RS=rs278647916;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	12896817	12896916	.	+	.	Name=Ear_height;B73v2_pos=9:11553785;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12900934	12901033	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11557902;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12901048	12901147	.	+	.	Name=Ear_height;B73v2_pos=9:11558016;1allele=G/C;version=Hapmap2;RS=rs843384155;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	12901060	12901159	.	+	.	Name=Ear_height;B73v2_pos=9:11558028;1allele=C/T;version=Hapmap2;RS=rs278647993;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	12903666	12903765	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11560634;1allele=C/A;version=Hapmap2;RS=rs130965859;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	12907446	12907545	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11564414;1allele=C/G;version=Hapmap2;RS=rs130965898;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	12908989	12909088	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11565957;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12926538	12926637	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11582577;1allele=C/G;version=Hapmap2;RS=rs819270681;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	12926538	12926637	.	+	.	Name=Ear_height;B73v2_pos=9:11582577;1allele=C/G;version=Hapmap2;RS=rs819270681;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	12926683	12926782	.	+	.	Name=Ear_height;B73v2_pos=9:11582722;1allele=G/A;version=Hapmap2;RS=rs278648224;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	12926692	12926791	.	+	.	Name=Ear_height;B73v2_pos=9:11582731;1allele=A/G;version=Hapmap2;RS=rs278648225;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12926692	12926791	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11582731;1allele=A/G;version=Hapmap2;RS=rs278648225;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12926708	12926807	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11582747;1allele=A/G;version=Hapmap2;RS=rs1062659553;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12926790	12926889	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11582829;1allele=C/T;version=Hapmap2;RS=rs278648227;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	12927073	12927172	.	+	.	Name=Ear_height;B73v2_pos=9:11583112;1allele=G/C;version=Hapmap2;RS=rs807558110;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	12927810	12927895	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11583935;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12930124	12930223	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11586192;1allele=G/A;version=Hapmap2;RS=rs818699854;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	12948316	12948415	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11606359;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12949933	12950032	.	+	.	Name=Ear_height;B73v2_pos=9:11607976;1allele=A/G;version=Hapmap2;RS=rs837213546;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12950902	12951001	.	+	.	Name=Ear_height;B73v2_pos=9:11608948;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12950973	12951072	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11609019;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12951152	12951251	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11609198;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	12951894	12951993	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11609940;1allele=A/G;version=Hapmap2;RS=rs278648268;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	12951962	12952061	.	+	.	Name=Ear_height;B73v2_pos=9:11610008;1allele=T/C;version=Hapmap2;RS=rs815082108;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	12969396	12969495	.	+	.	Name=Ear_height;B73v2_pos=9:11627285;1allele=G/A;version=Hapmap2;RS=rs1063965777;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	12971613	12971712	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11629498;1allele=A/C;version=Hapmap1;RS=rs131698716;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	12971613	12971712	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11629498;1allele=A/C;version=Hapmap1;RS=rs131698716;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	12995156	12995255	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11668167;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13042083	13042182	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:11698257;1allele=G/A;version=Hapmap2;RS=rs130966087;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	13048453	13048552	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11704628;1allele=T/C;version=Hapmap2;RS=rs827576746;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	13048578	13048677	.	+	.	Name=Ear_height;B73v2_pos=9:11704753;1allele=G/A;version=Hapmap2;RS=rs278648354;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	13075225	13075324	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11731363;1allele=G/T;version=Hapmap1;RS=rs131698824;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	13075225	13075324	.	+	.	Name=Ear_height;B73v2_pos=9:11731363;1allele=G/T;version=Hapmap2;RS=rs131698824;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	13081041	13081140	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11737178;1allele=A/G;version=Hapmap2;RS=rs835163712;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	13081086	13081185	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11737223;1allele=C/T;version=Hapmap2;RS=rs811326619;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	13085025	13085124	.	+	.	Name=Ear_height;B73v2_pos=9:11741162;1allele=G/A;version=Hapmap1;RS=rs130966209;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	13085798	13085897	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:11741935;1allele=T/C;version=Hapmap2;RS=rs130966216;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	13087827	13087926	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11743962;1allele=C/A;version=Hapmap2;RS=rs1064147742;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	13107910	13108009	.	+	.	Name=Ear_height;B73v2_pos=9:11764045;1allele=C/T;version=Hapmap2;RS=rs278648478;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	13168168	13168267	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11822730;1allele=C/T;version=Hapmap2;RS=rs130966366;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	13171860	13171959	.	+	.	Name=Tassel_length;B73v2_pos=9:11826422;1allele=C/T;version=Hapmap2;RS=rs1063113839;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	13177126	13177225	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11831689;1allele=G/A;version=Hapmap2;RS=rs1060805265;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	13246913	13247012	.	+	.	Name=Days_to_silk;B73v2_pos=8:7461509;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13289167	13289266	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11954501;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13307256	13307355	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11936405;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13307256	13307355	.	+	.	Name=Ear_height;B73v2_pos=9:11936405;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13307339	13307437	.	+	.	Name=Ear_height;B73v2_pos=9:11936322;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13318855	13318954	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:11971059;1allele=T/A;version=Hapmap2;RS=rs278648627;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	13355692	13355791	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:12005079;1allele=C/T;version=Hapmap2;RS=rs832273097;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	13364454	13364553	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12013842;1allele=C/T;version=Hapmap2;RS=rs1061108657;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	13367540	13367639	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12017139;1allele=C/T;version=Hapmap2;RS=rs727047421;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	13370799	13370898	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12020398;1allele=C/T;version=Hapmap2;RS=rs819446364;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	13376628	13376727	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:12026227;1allele=A/T;version=Hapmap2;RS=rs278648660;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	13383820	13383919	.	+	.	Name=Ear_height;B73v2_pos=9:12033419;1allele=G/T;version=Hapmap2;RS=rs802721075;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	13448469	13448564	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:12096239;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13455658	13455757	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12102735;1allele=A/T;version=Hapmap2;RS=rs130966563;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	13629543	13629642	.	+	.	Name=Ear_height;B73v2_pos=9:12245643;1allele=G/A;version=Hapmap2;RS=rs809533546;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	13702180	13702279	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:12343230;1allele=A/G;version=Hapmap2;RS=rs836718226;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	13702576	13702675	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:12343626;1allele=C/T;version=Hapmap2;RS=rs806497676;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	13763936	13764035	.	+	.	Name=Nodes_per_plant;B73v2_pos=5:162495575;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	13806121	13806220	.	+	.	Name=Leaf_length;B73v2_pos=9:12446474;1allele=G/A;version=Hapmap2;RS=rs1060668603;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	13970578	13970677	.	+	.	Name=Ear_height;B73v2_pos=9:12597410;1allele=G/C;version=Hapmap1;RS=rs131699488;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	13971673	13971772	.	+	.	Name=Height_above_ear;B73v2_pos=9:12598505;1allele=A/G;version=Hapmap1;RS=rs131699505;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	13972759	13972858	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:12599591;1allele=C/G;version=Hapmap1;RS=rs131699517;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	13992529	13992628	.	+	.	Name=Height_above_ear;B73v2_pos=9:12619368;1allele=C/A;version=Hapmap1;RS=rs131699573;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	13992751	13992850	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12619590;1allele=T/C;version=Hapmap1;RS=rs130967140;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	14024535	14024634	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12651377;1allele=G/A;version=Hapmap2;RS=rs804123199;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	14091462	14091561	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:12719008;1allele=C/A;version=Hapmap2;RS=rs131699656;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	14185281	14185380	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:12939989;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14213306	14213405	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:12896924;1allele=T/C;version=Hapmap2;RS=rs847938799;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	14215064	14215163	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:12898682;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14274357	14274456	.	+	.	Name=Height_above_ear;B73v2_pos=9:12884945;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14275248	14275347	.	+	.	Name=Height_above_ear;B73v2_pos=9:12884054;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14279510	14279609	.	+	.	Name=Tassel_length;B73v2_pos=9:12879815;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14290441	14290540	.	+	.	Name=Tassel_length;B73v2_pos=9:12868882;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14293138	14293237	.	+	.	Name=Height_above_ear;B73v2_pos=9:12866183;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14296148	14296247	.	+	.	Name=Total_amino_acids;B73v2_pos=9:12863173;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14320620	14320719	.	+	.	Name=Leaf_length;B73v2_pos=9:12811184;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14320706	14320805	.	+	.	Name=Leaf_length;B73v2_pos=9:12811098;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14321370	14321469	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12810434;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14321381	14321480	.	+	.	Name=Height_above_ear;B73v2_pos=9:12810423;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14321381	14321480	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:12810423;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14321648	14321747	.	+	.	Name=Height_above_ear;B73v2_pos=9:12810156;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14321831	14321930	.	+	.	Name=Height_above_ear;B73v2_pos=9:12809973;1allele=C/T;version=Hapmap2;RS=rs804605444;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	14323151	14323250	.	+	.	Name=Height_above_ear;B73v2_pos=9:12808653;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14326882	14326981	.	+	.	Name=Leaf_length;B73v2_pos=9:12804922;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14330721	14330820	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12801083;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14330721	14330820	.	+	.	Name=Height_above_ear;B73v2_pos=9:12801083;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14339289	14339388	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:12792515;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14399246	14399345	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13355995;1allele=G/A;version=Hapmap2;RS=rs726052752;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	14402089	14402188	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13353152;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14465287	14465386	.	+	.	Name=Total_amino_acids;B73v2_pos=9:13302117;1allele=C/T;version=Hapmap2;RS=rs828944632;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	14600884	14600983	.	+	.	Name=Tassel_length;B73v2_pos=9:13150218;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14603077	14603176	.	+	.	Name=Height_above_ear;B73v2_pos=9:13148025;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14631307	14631406	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:250398484;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14727507	14727606	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:13076557;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14744822	14744921	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13065571;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14773254	14773353	.	+	.	Name=Leaf_length;B73v2_pos=9:12992375;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14783395	14783494	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:12982060;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14988037	14988136	.	+	.	Name=Tassel_length;B73v2_pos=9:13446757;1allele=A/C;version=Hapmap1;RS=rs131700503;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	14988690	14988789	.	+	.	Name=Tassel_length;B73v2_pos=9:13447410;1allele=C/T;version=Hapmap2;RS=rs835109840;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	14988758	14988857	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:13447478;1allele=T/C;version=Hapmap2;RS=rs835642677;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	14988997	14989096	.	+	.	Name=Tassel_length;B73v2_pos=9:13447717;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	14993315	14993414	.	+	.	Name=Tassel_length;B73v2_pos=9:13452035;1allele=G/T;version=Hapmap1;RS=rs131700535;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	14993953	14994052	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:13452673;1allele=G/A;version=Hapmap2;RS=rs278650115;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	15002278	15002377	.	+	.	Name=Tassel_length;B73v2_pos=9:13460998;1allele=C/T;version=Hapmap2;RS=rs725990881;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15003544	15003643	.	+	.	Name=Leaf_length;B73v2_pos=9:13462264;1allele=C/T;version=Hapmap2;RS=rs725558101;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15027997	15028096	.	+	.	Name=Height_above_ear;B73v2_pos=9:13486605;1allele=/TAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15028214	15028313	.	+	.	Name=Total_amino_acids;B73v2_pos=9:13486822;1allele=C/G;version=Hapmap2;RS=rs130968003;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	15032359	15032458	.	+	.	Name=Total_amino_acids;B73v2_pos=9:13490968;1allele=C/T;version=Hapmap1;RS=rs131700788;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15032883	15032982	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13491492;1allele=A/T;version=Hapmap2;RS=rs130968018;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	15032978	15033077	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13491587;1allele=A/C;version=Hapmap2;RS=rs828634102;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	15185830	15185929	.	+	.	Name=Leaf_length;B73v2_pos=9:13646253;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15241764	15241863	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13704607;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15296630	15296729	.	+	.	Name=Total_amino_acids;B73v2_pos=9:13663632;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15311623	15311722	.	+	.	Name=Tassel_length;B73v2_pos=9:13753187;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15311820	15311919	.	+	.	Name=Tassel_length;B73v2_pos=9:13753384;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15318136	15318235	.	+	.	Name=Tassel_length;B73v2_pos=9:13759700;1allele=A/G;version=Hapmap2;RS=rs131700998;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	15318289	15318388	.	+	.	Name=Leaf_length;B73v2_pos=9:13759853;1allele=T/A;version=Hapmap2;RS=rs278650332;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	15319070	15319169	.	+	.	Name=Tassel_length;B73v2_pos=9:13760634;1allele=A/C;version=Hapmap2;RS=rs816379891;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	15438730	15438829	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:13873398;1allele=G/A;version=Hapmap2;RS=rs835961680;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	15481705	15481804	.	+	.	Name=Tassel_length;B73v2_pos=9:13913132;1allele=C/T;version=Hapmap2;RS=rs829143566;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15504043	15504142	.	+	.	Name=Fructose;B73v2_pos=9:13935242;1allele=C/G;version=Hapmap2;RS=rs823449053;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	15510686	15510785	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:13941885;1allele=G/A;version=Hapmap2;RS=rs847905029;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	15512608	15512707	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13943812;1allele=A/G;version=Hapmap2;RS=rs812504463;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	15512622	15512721	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13943826;1allele=T/C;version=Hapmap2;RS=rs848473507;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15514268	15514367	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:13945472;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15554650	15554749	.	+	.	Name=Height_above_ear;B73v2_pos=9:13984588;1allele=C/T;version=Hapmap2;RS=rs278650740;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15554854	15554953	.	+	.	Name=Height_above_ear;B73v2_pos=9:13984792;1allele=C/T;version=Hapmap2;RS=rs278650745;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15554871	15554970	.	+	.	Name=Height_above_ear;B73v2_pos=9:13984809;1allele=G/A;version=Hapmap2;RS=rs278650746;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	15554971	15555070	.	+	.	Name=Height_above_ear;B73v2_pos=9:13984909;1allele=G/A;version=Hapmap2;RS=rs805792096;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	15555269	15555368	.	+	.	Name=Height_above_ear;B73v2_pos=9:13985207;1allele=C/T;version=Hapmap2;RS=rs278650754;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15555269	15555368	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:13985207;1allele=C/T;version=Hapmap2;RS=rs278650754;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15556003	15556102	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:13985941;1allele=A/T;version=Hapmap2;RS=rs1061165853;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	15571036	15571135	.	+	.	Name=Leaf_length;B73v2_pos=9:14000376;1allele=G/A;version=Hapmap2;RS=rs130968569;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	15573758	15573857	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:14003098;1allele=A/G;version=Hapmap2;RS=rs278650856;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	15584471	15584570	.	+	.	Name=Ear_height;B73v2_pos=9:14014185;1allele=G/A;version=Hapmap2;RS=rs1062465608;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	15584666	15584765	.	+	.	Name=Ear_height;B73v2_pos=9:14014380;1allele=G/A;version=Hapmap2;RS=rs1061859231;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	15589976	15590075	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:14019691;1allele=T/C;version=Hapmap2;RS=rs131701385;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15591567	15591666	.	+	.	Name=Tassel_length;B73v2_pos=9:14021282;1allele=T/G;version=Hapmap1;RS=rs130968602;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	15594709	15594808	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:14024424;1allele=T/C;version=Hapmap2;RS=rs278651022;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15596315	15596414	.	+	.	Name=Ear_height;B73v2_pos=9:14026030;1allele=A/T;version=Hapmap2;RS=rs130968643;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	15609277	15609376	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:14112757;1allele=C/G;version=Hapmap2;RS=rs278651115;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	15609557	15609656	.	+	.	Name=Height_above_ear;B73v2_pos=9:14113037;1allele=C/T;version=Hapmap1;RS=rs131701429;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15772204	15772303	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:14200194;1allele=T/C;version=Hapmap1;RS=rs131701530;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15774634	15774733	.	+	.	Name=Leaf_length;B73v2_pos=9:14202624;1allele=G/A;version=Hapmap2;RS=rs829044745;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	15780289	15780388	.	+	.	Name=Leaf_length;B73v2_pos=5:203342407;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15880326	15880425	.	+	.	Name=Height_above_ear;B73v2_pos=9:14311575;1allele=G/A;version=Hapmap2;RS=rs278651340;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	15880645	15880744	.	+	.	Name=Tassel_length;B73v2_pos=9:14311894;1allele=T/G;version=Hapmap2;RS=rs1062604298;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	15884447	15884546	.	+	.	Name=Leaf_length;B73v2_pos=9:14315696;1allele=G/C;version=Hapmap2;RS=rs278651368;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	15885044	15885143	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:14316293;1allele=T/G;version=Hapmap1;RS=rs131701629;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	15937022	15937121	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:14367046;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	15992556	15992655	.	+	.	Name=Tassel_length;B73v2_pos=9:14456328;1allele=T/C;version=Hapmap1;RS=rs802627318;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15993526	15993625	.	+	.	Name=Height_above_ear;B73v2_pos=9:14457298;1allele=T/C;version=Hapmap2;RS=rs278651441;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15993578	15993677	.	+	.	Name=Tassel_length;B73v2_pos=9:14457350;1allele=C/T;version=Hapmap1;RS=rs131701860;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	15993594	15993693	.	+	.	Name=Height_above_ear;B73v2_pos=9:14457366;1allele=T/-;version=Hapmap1;RS=rs833580233;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	15993594	15993693	.	+	.	Name=Tassel_length;B73v2_pos=9:14457366;1allele=T/-;version=Hapmap1;RS=rs833580233;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	16082081	16082180	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:14519569;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16107325	16107424	.	+	.	Name=Ear_height;B73v2_pos=9:14537467;1allele=C/T;version=Hapmap2;RS=rs832772837;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	16110511	16110610	.	+	.	Name=Height_above_ear;B73v2_pos=9:14540653;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16430350	16430449	.	+	.	Name=Stalk_strength;B73v2_pos=9:14830563;1allele=T/C;version=Hapmap2;RS=rs130969383;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	16475056	16475155	.	+	.	Name=Height_above_ear;B73v2_pos=9:14878572;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16502783	16502882	.	+	.	Name=Height_above_ear;B73v2_pos=9:14901706;1allele=G/A;version=Hapmap2;RS=rs130969489;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	16506759	16506858	.	+	.	Name=Height_above_ear;B73v2_pos=9:14905683;1allele=A/T;version=Hapmap2;RS=rs815550688;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	16571969	16572067	.	+	.	Name=Ear_height;B73v2_pos=9:14979329;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16660688	16660787	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:15047987;1allele=G/A;version=Hapmap2;RS=rs130969697;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	16711988	16712087	.	+	.	Name=Ear_height;B73v2_pos=9:15100197;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16789773	16789872	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:15178872;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16913626	16913725	.	+	.	Name=Tassel_length;B73v2_pos=9:15300788;1allele=A/G;version=Hapmap2;RS=rs278652419;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	16928728	16928827	.	+	.	Name=Ear_height;B73v2_pos=9:15315890;1allele=T/C;version=Hapmap2;RS=rs278652508;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	16984875	16984974	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:15408758;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16985377	16985476	.	+	.	Name=Leaf_length;B73v2_pos=9:15408256;1allele=G/A;version=Hapmap2;RS=rs842355619;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	16987798	16987897	.	+	.	Name=Leaf_length;B73v2_pos=9:15405835;1allele=C/G;version=Hapmap1;RS=rs811964809;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	16991878	16991977	.	+	.	Name=Leaf_length;B73v2_pos=9:15401755;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16991964	16992063	.	+	.	Name=Leaf_length;B73v2_pos=9:15401669;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16992102	16992201	.	+	.	Name=Leaf_length;B73v2_pos=9:15401531;1allele=/CAG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16992243	16992342	.	+	.	Name=Leaf_length;B73v2_pos=9:15401390;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	16992598	16992697	.	+	.	Name=Leaf_length;B73v2_pos=9:15401035;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	17004435	17004534	.	+	.	Name=Stalk_strength;B73v2_pos=9:15360729;1allele=A/C;version=Hapmap2;RS=rs817210358;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	17004653	17004752	.	+	.	Name=Leaf_length;B73v2_pos=9:15360947;1allele=A/C;version=Hapmap2;RS=rs278652564;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	17005762	17005861	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:15362056;1allele=/CA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	17007443	17007542	.	+	.	Name=Stalk_strength;B73v2_pos=9:15363737;1allele=C/T;version=Hapmap2;RS=rs848343706;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	17115512	17115611	.	+	.	Name=Nitrate;B73v2_pos=4:163661217;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	17212430	17212529	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:15592280;1allele=G/A;version=Hapmap2;RS=rs130970613;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	17240463	17240562	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:15619563;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	17296901	17297000	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:15683347;1allele=C/T;version=Hapmap2;RS=rs130970665;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	17329655	17329754	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:15701694;1allele=C/T;version=Hapmap2;RS=rs130970778;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	17444461	17444560	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:15816477;1allele=C/T;version=Hapmap2;RS=rs1063066811;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	17445611	17445710	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:52965923;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	17618406	17618505	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:15990319;1allele=A/G;version=Hapmap2;RS=rs806877118;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	17619190	17619289	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:15991103;1allele=G/A;version=Hapmap2;RS=rs823779753;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	17632882	17632981	.	+	.	Name=Chlorophyll_B;B73v2_pos=9:16004795;1allele=A/C;version=Hapmap2;RS=rs814032356;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	17639281	17639380	.	+	.	Name=Nitrate;B73v2_pos=4:21704452;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	17667005	17667104	.	+	.	Name=Fructose;B73v2_pos=9:16040403;1allele=C/T;version=Hapmap2;RS=rs130971127;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	17668012	17668111	.	+	.	Name=Glucose;B73v2_pos=9:16041410;1allele=T/A;version=Hapmap2;RS=rs278653484;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	17958239	17958338	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16317865;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	17959569	17959668	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16319195;1allele=C/A;version=Hapmap1;RS=rs825419951;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	17959736	17959835	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16319362;1allele=C/T;version=Hapmap1;RS=rs130971381;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	17959965	17960064	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16319591;1allele=T/C;version=Hapmap2;RS=rs131703401;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	17960959	17961058	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16320585;1allele=G/A;version=Hapmap1;RS=rs131703432;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	17962695	17962794	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16322321;1allele=C/T;version=Hapmap1;RS=rs724689883;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	18033504	18033603	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:16391326;1allele=G/A;version=Hapmap2;RS=rs824181085;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	18078261	18078360	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16437538;1allele=C/T;version=Hapmap2;RS=rs820478315;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	18116650	18116749	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16476158;1allele=G/T;version=Hapmap2;RS=rs130971615;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	18116846	18116945	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16476354;1allele=T/G;version=Hapmap2;RS=rs130971617;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	18130419	18130518	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:16489927;1allele=A/G;version=Hapmap2;RS=rs278654053;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	18130828	18130927	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:16490336;1allele=G/A;version=Hapmap2;RS=rs278654064;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	18133280	18133379	.	+	.	Name=Stalk_strength;B73v2_pos=9:16492789;1allele=A/C;version=Hapmap2;RS=rs829689639;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	18179363	18179462	.	+	.	Name=Stalk_strength;B73v2_pos=9:16538875;1allele=G/A;version=Hapmap2;RS=rs811562966;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	18179411	18179510	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16538923;1allele=C/T;version=Hapmap2;RS=rs1061193489;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	18180016	18180115	.	+	.	Name=Stalk_strength;B73v2_pos=9:16539528;1allele=T/A;version=Hapmap2;RS=rs808812335;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	18310929	18311028	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:16677796;1allele=A/G;version=Hapmap2;RS=rs130971923;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	18316062	18316161	.	+	.	Name=Leaf_length;B73v2_pos=9:16682929;1allele=C/T;version=Hapmap2;RS=rs131703677;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	18366970	18367069	.	+	.	Name=Stalk_strength;B73v2_pos=9:16731546;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	18376583	18376682	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:16740940;1allele=C/T;version=Hapmap2;RS=rs841731454;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	18376595	18376694	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:16740952;1allele=A/T;version=Hapmap2;RS=rs1064698581;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	18376619	18376718	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:16740976;1allele=C/T;version=Hapmap2;RS=rs130972189;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	18393702	18393801	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:16758067;1allele=C/G;version=Hapmap2;RS=rs130972088;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	18644312	18644411	.	+	.	Name=Total_amino_acids;B73v2_pos=9:17012302;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	18742322	18742421	.	+	.	Name=Total_amino_acids;B73v2_pos=9:17031066;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	18745263	18745362	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=5:17325620;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	18920498	18920597	.	+	.	Name=Ear_row_number;B73v2_pos=9:17261459;1allele=A/G;version=Hapmap2;RS=rs1062589072;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	18954756	18954855	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:17308182;1allele=G/A;version=Hapmap2;RS=rs1062803626;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	19140051	19140150	.	+	.	Name=Tassel_length;B73v2_pos=9:17465192;1allele=C/T;version=Hapmap2;RS=rs130973675;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	19308268	19308367	.	+	.	Name=Stalk_strength;B73v2_pos=9:17632267;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	19407708	19407807	.	+	.	Name=Stalk_strength;B73v2_pos=9:17728981;1allele=A/G;version=Hapmap2;RS=rs844706863;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	19407802	19407901	.	+	.	Name=Stalk_strength;B73v2_pos=9:17729075;1allele=T/C;version=Hapmap2;RS=rs849940317;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	19485306	19485405	.	+	.	Name=Stalk_strength;B73v2_pos=9:17807467;1allele=C/T;version=Hapmap2;RS=rs831645626;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	19823773	19823872	.	+	.	Name=Ear_row_number;B73v2_pos=9:18070183;1allele=T/C;version=Hapmap2;RS=rs1061587053;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	19834229	19834328	.	+	.	Name=Ear_row_number;B73v2_pos=9:18096558;1allele=C/G;version=Hapmap2;RS=rs130974706;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	19988800	19988899	.	+	.	Name=Stalk_strength;B73v2_pos=9:18237240;1allele=G/A;version=Hapmap2;RS=rs847894534;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	20169802	20169901	.	+	.	Name=Stalk_strength;B73v2_pos=9:18412254;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	20264446	20264545	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:18495253;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	20293130	20293229	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=3:13113733;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	20438687	20438786	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:18619105;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	20440106	20440205	.	+	.	Name=Days_to_silk;B73v2_pos=9:18617693;1allele=A/G;version=Hapmap2;RS=rs823801353;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	20698267	20698366	.	+	.	Name=Total_amino_acids;B73v2_pos=9:18884885;1allele=G/C;version=Hapmap1;RS=rs131705480;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	20762515	20762614	.	+	.	Name=Total_amino_acids;B73v2_pos=9:18948586;1allele=G/C;version=Hapmap2;RS=rs805371338;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	20764734	20764833	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:18950805;1allele=T/C;version=Hapmap2;RS=rs1064459863;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	20767876	20767975	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:18953947;1allele=C/A;version=Hapmap2;RS=rs834352592;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	20817536	20817635	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:19007138;1allele=G/A;version=Hapmap2;RS=rs818585316;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	20818056	20818155	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:19007658;1allele=G/T;version=Hapmap2;RS=rs808287452;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	20854471	20854570	.	+	.	Name=Leaf_length;B73v2_pos=9:19042812;1allele=C/G;version=Hapmap2;RS=rs826552385;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	21032655	21032754	.	+	.	Name=Total_amino_acids;B73v2_pos=9:19223085;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	21040866	21040965	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:19231685;1allele=T/C;version=Hapmap2;RS=rs809630374;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	21055199	21055298	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:19246014;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	21092353	21092452	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:195295803;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	21425539	21425638	.	+	.	Name=Stalk_strength;B73v2_pos=9:19604148;1allele=-/A;version=Hapmap1;RS=rs817897044;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	21708674	21708773	.	+	.	Name=Total_amino_acids;B73v2_pos=9:19798617;1allele=G/A;version=Hapmap2;RS=rs131706147;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	21979522	21979621	.	+	.	Name=Leaf_length;B73v2_pos=9:20138045;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	21992747	21992846	.	+	.	Name=Leaf_length;B73v2_pos=9:20152577;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	21994994	21995093	.	+	.	Name=Leaf_length;B73v2_pos=9:20154825;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22173421	22173520	.	+	.	Name=Stalk_strength;B73v2_pos=9:20326358;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22178579	22178678	.	+	.	Name=Protein;B73v2_pos=9:20331518;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22185285	22185384	.	+	.	Name=Protein;B73v2_pos=9:20338224;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22185423	22185522	.	+	.	Name=Protein;B73v2_pos=9:20338362;1allele=/AATT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22323128	22323227	.	+	.	Name=Days_to_silk;B73v2_pos=9:20473144;1allele=/AGTA;version=Hapmap1;RS=rs131706882;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	22323134	22323233	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:20473150;1allele=G/A;version=Hapmap1;RS=rs131706883;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	22516052	22516151	.	+	.	Name=Protein;B73v2_pos=9:20663787;1allele=G/A;version=Hapmap2;RS=rs817691782;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	22518354	22518453	.	+	.	Name=Total_amino_acids;B73v2_pos=9:20666164;1allele=T/A;version=Hapmap1;RS=rs131707078;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	22605672	22605771	.	+	.	Name=Total_amino_acids;B73v2_pos=9:20748597;1allele=A/G;version=Hapmap2;RS=rs130978291;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	22609063	22609162	.	+	.	Name=Total_amino_acids;B73v2_pos=9:20751988;1allele=A/T;version=Hapmap1;RS=rs131707296;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	22609346	22609445	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20752271;1allele=G/A;version=Hapmap2;RS=rs131707302;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	22615162	22615261	.	+	.	Name=Stalk_strength;B73v2_pos=9:20758087;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22668915	22669014	.	+	.	Name=Total_amino_acids;B73v2_pos=9:20811378;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22680796	22680895	.	+	.	Name=Total_amino_acids;B73v2_pos=9:20823258;1allele=C/T;version=Hapmap2;RS=rs815138141;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	22684349	22684448	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20826414;1allele=G/A;version=Hapmap2;RS=rs278658454;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	22684680	22684779	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20826745;1allele=C/A;version=Hapmap2;RS=rs130978352;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	22684688	22684787	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20826753;1allele=C/T;version=Hapmap2;RS=rs130978353;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	22685417	22685516	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20827482;1allele=G/T;version=Hapmap2;RS=rs130978364;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	22685417	22685516	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:20827482;1allele=G/T;version=Hapmap2;RS=rs130978364;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	22686586	22686685	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20828651;1allele=G/C;version=Hapmap2;RS=rs820986021;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	22686586	22686685	.	+	.	Name=Total_amino_acids;B73v2_pos=9:20828651;1allele=G/C;version=Hapmap2;RS=rs820986021;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	22689810	22689909	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:20831875;1allele=C/T;version=Hapmap2;RS=rs805953019;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	22697770	22697869	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20838617;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	22764000	22764099	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:20902207;1allele=A/T;version=Hapmap1;RS=rs131707563;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	22770825	22770924	.	+	.	Name=Total_amino_acids;B73v2_pos=9:20909028;1allele=C/G;version=Hapmap2;RS=rs278658603;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	22771951	22772050	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:20910154;1allele=C/A;version=Hapmap2;RS=rs130978506;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	22837670	22837769	.	+	.	Name=Fructose;B73v2_pos=9:20975659;1allele=G/A;version=Hapmap2;RS=rs820245166;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	23165020	23165119	.	+	.	Name=Ear_height;B73v2_pos=3:41235895;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	23428139	23428238	.	+	.	Name=Stalk_strength;B73v2_pos=9:21566534;1allele=-/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	23593117	23593216	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:21724904;1allele=G/A;version=Hapmap2;RS=rs834566619;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	23593259	23593358	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:21724762;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	23593999	23594098	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:21724022;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	23669633	23669732	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:21817148;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	23690836	23690935	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:21846246;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	23690836	23690935	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:21846246;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	23758037	23758136	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:21922456;1allele=T/G;version=Hapmap2;RS=rs835793595;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	23758811	23758910	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:21923230;1allele=C/T;version=Hapmap2;RS=rs841687717;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	23805106	23805205	.	+	.	Name=Stalk_strength;B73v2_pos=9:21954593;1allele=A/G;version=Hapmap2;RS=rs806396893;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	23850238	23850337	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:21998602;1allele=A/T;version=Hapmap2;RS=rs130979298;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	23913097	23913196	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:22059436;1allele=C/T;version=Hapmap2;RS=rs130979361;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	24071514	24071613	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:22216224;1allele=C/T;version=Hapmap2;RS=rs815221568;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	24379116	24379215	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:24957911;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	24538557	24538656	.	+	.	Name=Height_above_ear;B73v2_pos=9:22658370;1allele=C/T;version=Hapmap2;RS=rs847612594;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	24560532	24560631	.	+	.	Name=Total_amino_acids;B73v2_pos=9:22680345;1allele=A/G;version=Hapmap2;RS=rs278660293;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	24566032	24566131	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:22685749;1allele=G/A;version=Hapmap2;RS=rs842602162;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	24667397	24667496	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:22786496;1allele=C/T;version=Hapmap2;RS=rs818382909;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	24668435	24668534	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:22787534;1allele=G/A;version=Hapmap2;RS=rs278660478;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	24723516	24723615	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:22843335;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	24727270	24727369	.	+	.	Name=Total_amino_acids;B73v2_pos=9:22847089;1allele=A/T;version=Hapmap2;RS=rs278660568;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	24736560	24736659	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:22856380;1allele=T/G;version=Hapmap2;RS=rs278660732;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	24770462	24770561	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:22890374;1allele=C/T;version=Hapmap2;RS=rs837934704;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	24873288	24873387	.	+	.	Name=Total_amino_acids;B73v2_pos=9:23014691;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	24995414	24995513	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:23054333;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	24995452	24995551	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:23054295;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25025924	25026023	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:23133859;1allele=A/C;version=Hapmap2;RS=rs806780102;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	25033930	25034029	.	+	.	Name=Total_amino_acids;B73v2_pos=9:23141871;1allele=G/A;version=Hapmap1;RS=rs131709083;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	25109097	25109196	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:23210187;1allele=/GCCGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25109405	25109504	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:23210495;1allele=C/G;version=Hapmap1;RS=rs130980576;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	25128587	25128686	.	+	.	Name=Total_amino_acids;B73v2_pos=9:23258158;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25128704	25128803	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:23258275;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25346922	25347021	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:23460606;1allele=C/T;version=Hapmap2;RS=rs278661459;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	25352208	25352307	.	+	.	Name=Nitrate;B73v2_pos=9:23466069;1allele=C/T;version=Hapmap2;RS=rs1063177771;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	25387566	25387665	.	+	.	Name=Stalk_strength;B73v2_pos=9:23496459;1allele=A/C;version=Hapmap2;RS=rs841206737;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	25408716	25408815	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:23518037;1allele=A/T;version=Hapmap2;RS=rs130980968;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	25416014	25416113	.	+	.	Name=Total_amino_acids;B73v2_pos=9:23525335;1allele=C/T;version=Hapmap2;RS=rs814852045;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	25489607	25489706	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:23590185;1allele=T/A;version=Hapmap2;RS=rs836379523;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	25513469	25513568	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:23615721;1allele=G/T;version=Hapmap2;RS=rs845739485;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	25545090	25545189	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:23646913;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25580233	25580332	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:23682090;1allele=A/G;version=Hapmap2;RS=rs847537650;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	25615703	25615802	.	+	.	Name=Total_amino_acids;B73v2_pos=9:23717565;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25616461	25616560	.	+	.	Name=Total_amino_acids;B73v2_pos=9:23718323;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25620151	25620250	.	+	.	Name=Stalk_strength;B73v2_pos=9:23722015;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25620470	25620569	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:23722334;1allele=T/C;version=Hapmap2;RS=rs1064219294;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	25622179	25622278	.	+	.	Name=Leaf_length;B73v2_pos=9:23724043;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	25704997	25705096	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:23805122;1allele=T/C;version=Hapmap2;RS=rs827644749;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	25704997	25705096	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:23805122;1allele=T/C;version=Hapmap2;RS=rs827644749;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	25869626	25869725	.	+	.	Name=Stalk_strength;B73v2_pos=9:23958631;1allele=A/G;version=Hapmap2;RS=rs807501938;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	25975156	25975255	.	+	.	Name=Stalk_strength;B73v2_pos=9:24062593;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	26047069	26047168	.	+	.	Name=Height_above_ear;B73v2_pos=9:24091431;1allele=C/T;version=Hapmap2;RS=rs807386813;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	26117011	26117110	.	+	.	Name=Stalk_strength;B73v2_pos=9:24196235;1allele=C/T;version=Hapmap1;RS=rs131710328;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	26118346	26118445	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:24197570;1allele=C/T;version=Hapmap2;RS=rs131710353;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	26118346	26118445	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:24197570;1allele=C/T;version=Hapmap2;RS=rs131710353;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	26126065	26126164	.	+	.	Name=Stalk_strength;B73v2_pos=9:24205289;1allele=C/T;version=Hapmap2;RS=rs821203680;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	26275840	26275939	.	+	.	Name=Days_to_silk;B73v2_pos=9:24325916;1allele=C/T;version=Hapmap2;RS=rs846332290;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	26329919	26330018	.	+	.	Name=Days_to_silk;B73v2_pos=9:24400925;1allele=A/G;version=Hapmap2;RS=rs827928808;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	26357344	26357443	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:24424381;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	26405359	26405458	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:24467537;1allele=C/A;version=Hapmap2;RS=rs724337060;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	26414274	26414373	.	+	.	Name=Days_to_silk;B73v2_pos=9:24476452;1allele=G/T;version=Hapmap2;RS=rs830344480;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	26448079	26448178	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:24509274;1allele=A/G;version=Hapmap2;RS=rs278662308;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	26448173	26448272	.	+	.	Name=Plant_height;B73v2_pos=9:24509368;1allele=G/A;version=Hapmap2;RS=rs832745957;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	26449081	26449180	.	+	.	Name=Nitrate;B73v2_pos=9:24510276;1allele=A/G;version=Hapmap2;RS=rs801882580;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	26449601	26449700	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:24510796;1allele=A/G;version=Hapmap2;RS=rs807517617;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	26449601	26449700	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:24510796;1allele=A/G;version=Hapmap2;RS=rs807517617;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	26485115	26485214	.	+	.	Name=Nitrate;B73v2_pos=9:24547584;1allele=G/A;version=Hapmap2;RS=rs131710740;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	26649301	26649400	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:24707676;1allele=C/G;version=Hapmap2;RS=rs824969726;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	26734939	26735038	.	+	.	Name=Days_to_silk;B73v2_pos=9:24791160;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	26859465	26859564	.	+	.	Name=Tassel_length;B73v2_pos=1:249618705;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	26913221	26913320	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:24942207;1allele=T/G;version=Hapmap2;RS=rs805650454;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	26913221	26913320	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:24942207;1allele=T/G;version=Hapmap2;RS=rs805650454;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	27059148	27059247	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:25073186;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	27059162	27059261	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:25073200;1allele=T/A;version=Hapmap2;RS=rs829856604;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	27093013	27093112	.	+	.	Name=Chlorophyll_A;B73v2_pos=9:25112750;1allele=G/A;version=Hapmap1;RS=rs130982711;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	27205649	27205748	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:25225398;1allele=C/A;version=Hapmap2;RS=rs836366136;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	27245859	27245958	.	+	.	Name=Days_to_silk;B73v2_pos=9:25265607;1allele=C/G;version=Hapmap2;RS=rs131711352;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	27261677	27261776	.	+	.	Name=Stalk_strength;B73v2_pos=9:25281422;1allele=T/G;version=Hapmap2;RS=rs808431291;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	27324106	27324205	.	+	.	Name=Stalk_strength;B73v2_pos=9:25329902;1allele=G/A;version=Hapmap2;RS=rs837253274;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	27334959	27335058	.	+	.	Name=Days_to_silk;B73v2_pos=9:25340767;1allele=A/G;version=Hapmap2;RS=rs130983049;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	27355529	27355628	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:25362093;1allele=G/A;version=Hapmap2;RS=rs828323530;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	27405602	27405701	.	+	.	Name=Days_to_silk;B73v2_pos=9:25412644;1allele=T/C;version=Hapmap2;RS=rs848615104;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	27537664	27537763	.	+	.	Name=Stalk_strength;B73v2_pos=9:25524986;1allele=C/T;version=Hapmap2;RS=rs845013975;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	27838730	27838829	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:25820014;1allele=A/G;version=Hapmap2;RS=rs834463674;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	27870876	27870975	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:25853886;1allele=A/C;version=Hapmap2;RS=rs810290192;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	27871158	27871257	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:25854168;1allele=T/A;version=Hapmap2;RS=rs130983849;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	27991431	27991530	.	+	.	Name=Nitrate;B73v2_pos=4:163838632;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	28022266	28022365	.	+	.	Name=Total_amino_acids;B73v2_pos=9:26018167;1allele=C/T;version=Hapmap2;RS=rs278663903;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	28024187	28024286	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:26020090;1allele=C/T;version=Hapmap2;RS=rs804816975;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	28284691	28284790	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:26280837;1allele=G/A;version=Hapmap2;RS=rs849692890;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	28294683	28294782	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:26290831;1allele=T/G;version=Hapmap2;RS=rs808128131;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	28334172	28334271	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:26330351;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	28428980	28429079	.	+	.	Name=Stalk_strength;B73v2_pos=9:26427083;1allele=C/T;version=Hapmap2;RS=rs840992634;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	28473196	28473297	.	+	.	Name=Ear_height;B73v2_pos=5:94788368;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	28482633	28482732	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:26471169;1allele=T/C;version=Hapmap2;RS=rs804413235;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	28485365	28485464	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:26473901;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	28558388	28558487	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:26548686;1allele=C/A;version=Hapmap2;RS=rs822982718;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	28620616	28620715	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:26609767;1allele=C/A;version=Hapmap2;RS=rs811117796;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	28623002	28623101	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:26612153;1allele=A/G;version=Hapmap2;RS=rs826186632;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	28623010	28623109	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:26612161;1allele=G/A;version=Hapmap2;RS=rs130985257;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	28630903	28631002	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:26620054;1allele=T/G;version=Hapmap2;RS=rs835792419;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	28635159	28635258	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:26624310;1allele=G/C;version=Hapmap1;RS=rs130985231;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	28670552	28670651	.	+	.	Name=Stalk_strength;B73v2_pos=9:26652178;1allele=C/T;version=Hapmap2;RS=rs814111350;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	28673926	28674025	.	+	.	Name=Stalk_strength;B73v2_pos=9:26655552;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	28682978	28683077	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:26664604;1allele=A/G;version=Hapmap2;RS=rs813629252;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	28682989	28683088	.	+	.	Name=Stalk_strength;B73v2_pos=9:26664615;1allele=C/T;version=Hapmap2;RS=rs825269276;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	28740477	28740576	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:26754575;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	28846974	28847073	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:26817404;1allele=G/T;version=Hapmap2;RS=rs278664966;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	28857295	28857394	.	+	.	Name=Tassel_length;B73v2_pos=9:26827723;1allele=G/A;version=Hapmap2;RS=rs278665022;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	28972364	28972463	.	+	.	Name=Stalk_strength;B73v2_pos=9:26942663;1allele=G/A;version=Hapmap2;RS=rs841946024;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	28972550	28972649	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:26942849;1allele=T/C;version=Hapmap2;RS=rs278665112;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	28974611	28974710	.	+	.	Name=Total_amino_acids;B73v2_pos=9:26944910;1allele=T/G;version=Hapmap2;RS=rs131712850;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	29016817	29016916	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:26989348;1allele=G/A;version=Hapmap2;RS=rs812682412;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	29046896	29046995	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:27020255;1allele=A/C;version=Hapmap1;RS=rs131712959;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	29124946	29125045	.	+	.	Name=Total_amino_acids;B73v2_pos=9:27081532;1allele=C/T;version=Hapmap2;RS=rs830816462;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	29133928	29134027	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:27090514;1allele=T/G;version=Hapmap2;RS=rs828610197;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	29192966	29193065	.	+	.	Name=Stalk_strength;B73v2_pos=9:27149554;1allele=G/A;version=Hapmap2;RS=rs832374782;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	29209783	29209882	.	+	.	Name=Stalk_strength;B73v2_pos=9:27166255;1allele=A/C;version=Hapmap2;RS=rs815905955;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	29222357	29222456	.	+	.	Name=Total_amino_acids;B73v2_pos=9:27178828;1allele=T/G;version=Hapmap2;RS=rs130985932;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	29292101	29292200	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:27223797;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	29292857	29292956	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:27223041;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	29292943	29293042	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:27222955;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	29317303	29317402	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:27271352;1allele=C/G;version=Hapmap2;RS=rs841422892;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	29395110	29395209	.	+	.	Name=Stalk_strength;B73v2_pos=9:27347939;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	29836031	29836130	.	+	.	Name=Ear_height;B73v2_pos=9:27798756;1allele=G/T;version=Hapmap2;RS=rs820730352;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	29866589	29866688	.	+	.	Name=Glucose;B73v2_pos=9:27829317;1allele=T/C;version=Hapmap2;RS=rs845939697;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	30053377	30053476	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:28017631;1allele=A/C;version=Hapmap2;RS=rs1063700270;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	30088112	30088211	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28047125;1allele=A/C;version=Hapmap2;RS=rs807752593;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	30108951	30109050	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28067915;1allele=A/G;version=Hapmap2;RS=rs130986857;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	30175016	30175115	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28166032;1allele=A/G;version=Hapmap2;RS=rs808729977;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	30175301	30175400	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:28166317;1allele=C/T;version=Hapmap1;RS=rs817846165;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	30176582	30176681	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:28167598;1allele=G/A;version=Hapmap2;RS=rs278666345;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	30235168	30235267	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:28250081;1allele=A/G;version=Hapmap2;RS=rs809771991;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	30261112	30261211	.	+	.	Name=Plant_height;B73v2_pos=5:71654521;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	30271503	30271602	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28278389;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	30398708	30398807	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28401443;1allele=A/C;version=Hapmap2;RS=rs130987146;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	30424771	30424870	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28427508;1allele=T/G;version=Hapmap2;RS=rs842137944;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	30426603	30426702	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:28429340;1allele=C/T;version=Hapmap2;RS=rs278666873;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	30427267	30427366	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28430004;1allele=C/T;version=Hapmap2;RS=rs830243328;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	30431774	30431873	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28434511;1allele=T/G;version=Hapmap2;RS=rs278666914;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	30431774	30431873	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:28434511;1allele=T/G;version=Hapmap2;RS=rs278666914;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	30438226	30438325	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28440963;1allele=C/G;version=Hapmap2;RS=rs803461251;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	30488100	30488199	.	+	.	Name=Stalk_strength;B73v2_pos=9:28488260;1allele=G/A;version=Hapmap2;RS=rs829261571;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	30505860	30505959	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:28506020;1allele=A/G;version=Hapmap2;RS=rs278667002;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	30506747	30506846	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:28506907;1allele=T/C;version=Hapmap2;RS=rs130987232;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	30534727	30534826	.	+	.	Name=Ear_height;B73v2_pos=9:28535734;1allele=T/A;version=Hapmap2;RS=rs829747661;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	30543936	30544035	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28544943;1allele=G/T;version=Hapmap2;RS=rs841279704;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	30590003	30590102	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:28591072;1allele=T/C;version=Hapmap2;RS=rs822177959;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	30590521	30590620	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:28591590;1allele=C/A;version=Hapmap2;RS=rs850158399;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	30590534	30590633	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:28591603;1allele=T/G;version=Hapmap2;RS=rs805920925;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	30609299	30609398	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:28610271;1allele=G/A;version=Hapmap2;RS=rs55623797;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	30667039	30667138	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:234738492;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	30797292	30797391	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28791205;1allele=G/A;version=Hapmap2;RS=rs828448925;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	30811515	30811614	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:28805429;1allele=A/G;version=Hapmap2;RS=rs278667307;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	30812294	30812393	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:28806208;1allele=G/T;version=Hapmap2;RS=rs278667320;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	30813428	30813527	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:28807342;1allele=G/A;version=Hapmap2;RS=rs806287309;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	30915064	30915163	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:28912756;1allele=C/T;version=Hapmap2;RS=rs847392831;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	30938540	30938639	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:28936231;1allele=T/G;version=Hapmap2;RS=rs819871047;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	31012130	31012229	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:28973636;1allele=G/A;version=Hapmap2;RS=rs831269573;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	31092787	31092886	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:29046291;1allele=G/A;version=Hapmap2;RS=rs806956821;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	31093656	31093755	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:29047167;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	31093695	31093794	.	+	.	Name=Days_to_silk;B73v2_pos=9:29047206;1allele=C/T;version=Hapmap2;RS=rs815026093;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	31137515	31137614	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:113189374;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	31184904	31185003	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:29109153;1allele=T/C;version=Hapmap2;RS=rs130987740;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	31296343	31296442	.	+	.	Name=Stalk_strength;B73v2_pos=9:29232867;1allele=C/T;version=Hapmap2;RS=rs130987975;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	31346855	31346954	.	+	.	Name=Days_to_anthesis;B73v2_pos=2:146132141;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	31998485	31998584	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:29915884;1allele=C/T;version=Hapmap2;RS=rs848380481;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	32027675	32027774	.	+	.	Name=Ear_height;B73v2_pos=9:29945098;1allele=G/C;version=Hapmap2;RS=rs839180340;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	32296061	32296160	.	+	.	Name=Tassel_length;B73v2_pos=9:30201325;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	32623964	32624063	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:30512470;1allele=G/A;version=Hapmap2;RS=rs808775546;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	32627742	32627841	.	+	.	Name=Tassel_branch_number;B73v2_pos=8:120394304;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	32643720	32643819	.	+	.	Name=Ear_row_number;B73v2_pos=9:30532229;1allele=T/C;version=Hapmap2;RS=rs1064645985;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	32735394	32735493	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30647142;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	32855287	32855386	.	+	.	Name=Tassel_length;B73v2_pos=9:30750417;1allele=C/T;version=Hapmap2;RS=rs812199208;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	32855814	32855913	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:30750944;1allele=/GTAC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	32858361	32858460	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30753491;1allele=G/A;version=Hapmap2;RS=rs827955544;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	32859518	32859617	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30754648;1allele=C/T;version=Hapmap2;RS=rs817010415;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	32869189	32869288	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30765140;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	32900721	32900820	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:30796417;1allele=C/A;version=Hapmap2;RS=rs130991598;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	32932168	32932267	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30827879;1allele=A/C;version=Hapmap2;RS=rs802493684;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	32933124	32933223	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30828835;1allele=T/C;version=Hapmap2;RS=rs131714313;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	32946492	32946591	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30842205;1allele=A/G;version=Hapmap2;RS=rs844187763;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	32980424	32980523	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:30878446;1allele=G/A;version=Hapmap2;RS=rs278669458;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	33033970	33034069	.	+	.	Name=Height_above_ear;B73v2_pos=9:30929355;1allele=C/G;version=Hapmap2;RS=rs809473359;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	33034223	33034322	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:30929608;1allele=C/T;version=Hapmap2;RS=rs849266261;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	33045795	33045894	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:30941180;1allele=A/G;version=Hapmap2;RS=rs810703259;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33049256	33049355	.	+	.	Name=Height_above_ear;B73v2_pos=9:30944641;1allele=C/T;version=Hapmap2;RS=rs828775258;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	33107292	33107391	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:31002308;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33197639	33197738	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31093078;1allele=C/T;version=Hapmap1;RS=rs131714487;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	33273171	33273270	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31169745;1allele=T/C;version=Hapmap2;RS=rs829417574;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	33273853	33273952	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31170427;1allele=C/T;version=Hapmap2;RS=rs813763670;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	33303529	33303628	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31201445;1allele=T/A;version=Hapmap2;RS=rs278669879;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	33380262	33380361	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:31278504;1allele=A/C;version=Hapmap2;RS=rs806708174;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	33386993	33387092	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31285235;1allele=G/A;version=Hapmap2;RS=rs818250955;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33389470	33389569	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:31287712;1allele=G/A;version=Hapmap2;RS=rs819797489;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33389470	33389569	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:31287712;1allele=G/A;version=Hapmap2;RS=rs819797489;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33391746	33391845	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31289988;1allele=A/G;version=Hapmap2;RS=rs831094132;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	33394052	33394151	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31292294;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33395686	33395785	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:31293928;1allele=G/T;version=Hapmap2;RS=rs803560501;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	33395686	33395785	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:31293928;1allele=G/T;version=Hapmap2;RS=rs803560501;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	33461720	33461819	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31331557;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33487401	33487500	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31385406;1allele=A/G;version=Hapmap2;RS=rs278670317;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	33487614	33487713	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31385619;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33510605	33510704	.	+	.	Name=Ear_height;B73v2_pos=9:31406999;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33516828	33516927	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31413222;1allele=A/G;version=Hapmap2;RS=rs278670373;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33518280	33518379	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31414674;1allele=G/T;version=Hapmap2;RS=rs1064124809;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	33519701	33519800	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31416095;1allele=G/A;version=Hapmap2;RS=rs1061972956;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	33534201	33534300	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31430595;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33563298	33563397	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31457959;1allele=C/A;version=Hapmap2;RS=rs1062455573;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	33568444	33568543	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31463108;1allele=A/G;version=Hapmap2;RS=rs278670532;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33570361	33570460	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31465025;1allele=A/G;version=Hapmap2;RS=rs130993515;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33582826	33582925	.	+	.	Name=Ear_height;B73v2_pos=9:31477215;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33589112	33589211	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31483501;1allele=G/A;version=Hapmap2;RS=rs130993550;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33659791	33659881	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=6:133884692;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33668485	33668584	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:105883227;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33796323	33796422	.	+	.	Name=Leaf_length;B73v2_pos=9:105990360;1allele=A/G;version=Hapmap2;RS=rs847886181;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	33800939	33801038	.	+	.	Name=Leaf_length;B73v2_pos=9:105994992;1allele=C/A;version=Hapmap2;RS=rs829605295;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	33806427	33806526	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:106000487;1allele=T/C;version=Hapmap2;RS=rs278787374;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	33808039	33808138	.	+	.	Name=Leaf_width;B73v2_pos=9:106002099;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33854566	33854665	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:106046972;1allele=C/T;version=Hapmap2;RS=rs810367715;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	33857649	33857748	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:106050055;1allele=G/A;version=Hapmap2;RS=rs814761726;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	33862910	33863009	.	+	.	Name=Leaf_length;B73v2_pos=9:106055316;1allele=A/C;version=Hapmap2;RS=rs838498541;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	33897786	33897885	.	+	.	Name=Ear_height;B73v2_pos=9:106071821;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33898143	33898242	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:106071464;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33898906	33899005	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:106070701;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33898906	33899005	.	+	.	Name=Height_above_ear;B73v2_pos=9:106070701;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33912761	33912860	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:106105305;1allele=G/T;version=Hapmap2;RS=rs814091722;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	33916434	33916532	.	+	.	Name=Days_to_silk;B73v2_pos=9:106108980;1allele=T/A;version=Hapmap2;RS=rs808050857;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	33928104	33928203	.	+	.	Name=Leaf_length;B73v2_pos=9:106129509;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33929325	33929424	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:106128288;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33929342	33929441	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:106128271;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	33995692	33995791	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:106172926;1allele=G/C;version=Hapmap2;RS=rs278787520;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	33997292	33997391	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:106197601;1allele=A/G;version=Hapmap2;RS=rs807181582;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	34176306	34176405	.	+	.	Name=Ear_height;B73v2_pos=9:106346237;1allele=A/G;version=Hapmap2;RS=rs278788296;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	34229096	34229195	.	+	.	Name=Ear_row_number;B73v2_pos=9:106399033;1allele=T/C;version=Hapmap2;RS=rs131108970;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	34230878	34230977	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:106400815;1allele=A/T;version=Hapmap2;RS=rs809266882;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	34418311	34418410	.	+	.	Name=Ear_height;B73v2_pos=9:106656711;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	34490512	34490611	.	+	.	Name=Leaf_length;B73v2_pos=9:106631525;1allele=A/T;version=Hapmap2;RS=rs832281808;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	34581817	34581916	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:106724723;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	34628783	34628882	.	+	.	Name=Leaf_length;B73v2_pos=9:106790971;1allele=A/G;version=Hapmap2;RS=rs131109711;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	34629358	34629457	.	+	.	Name=Ear_height;B73v2_pos=9:106791546;1allele=A/G;version=Hapmap2;RS=rs815851915;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	34629705	34629804	.	+	.	Name=Leaf_length;B73v2_pos=9:106791893;1allele=G/A;version=Hapmap2;RS=rs278789505;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	34630259	34630358	.	+	.	Name=Leaf_length;B73v2_pos=9:106792447;1allele=G/A;version=Hapmap2;RS=rs827586117;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	34630418	34630517	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:106792606;1allele=T/G;version=Hapmap2;RS=rs827037417;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	34633647	34633746	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:106795835;1allele=C/A;version=Hapmap2;RS=rs131109765;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	34633647	34633746	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:106795835;1allele=C/A;version=Hapmap2;RS=rs131109765;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	34670512	34670611	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:106832700;1allele=G/A;version=Hapmap2;RS=rs819463119;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	34691766	34691865	.	+	.	Name=Leaf_length;B73v2_pos=9:106857944;1allele=A/G;version=Hapmap2;RS=rs845278729;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	34691980	34692079	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:106858158;1allele=G/A;version=Hapmap2;RS=rs131109914;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	34691980	34692079	.	+	.	Name=Leaf_length;B73v2_pos=9:106858158;1allele=G/A;version=Hapmap2;RS=rs131109914;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	34695408	34695507	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:106861586;1allele=G/A;version=Hapmap2;RS=rs808867349;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	34695549	34695648	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:106861727;1allele=C/A;version=Hapmap2;RS=rs131109943;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	34811835	34811934	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31575288;1allele=C/T;version=Hapmap2;RS=rs833358811;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	34833093	34833192	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:31611816;1allele=A/C;version=Hapmap2;RS=rs818018821;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	34844736	34844835	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:31593291;1allele=A/T;version=Hapmap2;RS=rs825391314;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	34902383	34902482	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:31672983;1allele=T/C;version=Hapmap2;RS=rs843799641;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	34994088	34994187	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31753142;1allele=G/T;version=Hapmap2;RS=rs130993864;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	35020596	35020695	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:31783598;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	35021832	35021931	.	+	.	Name=PCA_of_metabolites:_PC1;B73v2_pos=9:31782362;1allele=A/G;version=Hapmap2;RS=rs821215725;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	35036363	35036462	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:31767746;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	35039140	35039239	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31797634;1allele=T/C;version=Hapmap2;RS=rs822010616;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	35040807	35040906	.	+	.	Name=Ear_height;B73v2_pos=9:31799518;1allele=C/G;version=Hapmap2;RS=rs849090924;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	35042172	35042271	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:31800884;1allele=G/T;version=Hapmap2;RS=rs819789528;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	35110666	35110766	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:31870004;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	35121635	35121734	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:31880973;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	35322857	35322956	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:32078223;1allele=C/T;version=Hapmap2;RS=rs837363074;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	35698803	35698902	.	+	.	Name=Tassel_length;B73v2_pos=9:32343142;1allele=A/G;version=Hapmap2;RS=rs832566981;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	35710617	35710716	.	+	.	Name=Ear_row_number;B73v2_pos=1:278205759;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	35734015	35734114	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:32377789;1allele=G/A;version=Hapmap1;RS=rs130995658;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	35739902	35740001	.	+	.	Name=Protein;B73v2_pos=9:32383676;1allele=G/A;version=Hapmap2;RS=rs826102742;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	35846357	35846456	.	+	.	Name=Chlorophyll_B;B73v2_pos=9:32488547;1allele=A/C;version=Hapmap2;RS=rs808841187;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	35849419	35849513	.	+	.	Name=Tassel_length;B73v2_pos=9:32491609;1allele=G/A;version=Hapmap2;RS=rs808082534;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	36081460	36081559	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:32756163;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	36333957	36334056	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:33021912;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	36900060	36900159	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:33580057;1allele=A/G;version=Hapmap2;RS=rs278673395;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	36900061	36900160	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:33580058;1allele=G/A;version=Hapmap2;RS=rs844786260;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	36939351	36939450	.	+	.	Name=Ear_height;B73v2_pos=9:33619086;1allele=C/A;version=Hapmap2;RS=rs847282157;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	37013947	37014046	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:33695207;1allele=C/A;version=Hapmap2;RS=rs818369545;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	37031248	37031347	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:33712508;1allele=G/T;version=Hapmap2;RS=rs812279962;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	37125373	37125472	.	+	.	Name=Days_to_silk;B73v2_pos=9:33805033;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	37141295	37141394	.	+	.	Name=Glucose;B73v2_pos=9:33789110;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	37141298	37141397	.	+	.	Name=Glucose;B73v2_pos=9:33789107;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	37145737	37145836	.	+	.	Name=Days_to_silk;B73v2_pos=9:33784117;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	37194716	37194815	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:33873933;1allele=A/G;version=Hapmap2;RS=rs826951639;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	37200672	37200771	.	+	.	Name=Days_to_silk;B73v2_pos=9:33879890;1allele=A/C;version=Hapmap2;RS=rs810377274;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	37276372	37276471	.	+	.	Name=Days_to_silk;B73v2_pos=9:33956891;1allele=G/A;version=Hapmap2;RS=rs725448565;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	37310342	37310441	.	+	.	Name=Days_to_silk;B73v2_pos=9:33985605;1allele=G/T;version=Hapmap2;RS=rs818789955;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	37368941	37369040	.	+	.	Name=Ear_height;B73v2_pos=9:34050292;1allele=T/A;version=Hapmap2;RS=rs805694956;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	37461069	37461168	.	+	.	Name=Days_to_silk;B73v2_pos=9:34143890;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	37468038	37468137	.	+	.	Name=Days_to_silk;B73v2_pos=9:34138908;1allele=G/A;version=Hapmap2;RS=rs833267674;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	37523816	37523915	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:34196743;1allele=C/T;version=Hapmap2;RS=rs832050769;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	37562210	37562309	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:34235095;1allele=G/T;version=Hapmap2;RS=rs817067024;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	37562448	37562547	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:34235333;1allele=T/C;version=Hapmap2;RS=rs130998680;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	37563047	37563146	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:34235932;1allele=T/C;version=Hapmap2;RS=rs1062732399;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	37563047	37563146	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:34235932;1allele=T/C;version=Hapmap2;RS=rs1062732399;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	37673434	37673533	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:34346302;1allele=C/T;version=Hapmap2;RS=rs1063914787;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	37717424	37717523	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:34390290;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	37747148	37747247	.	+	.	Name=Chlorophyll_B;B73v2_pos=9:34432945;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	37990880	37990979	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:34665845;1allele=T/C;version=Hapmap2;RS=rs1061261094;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	38087841	38087940	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:34709200;1allele=C/T;version=Hapmap2;RS=rs278674398;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	38200608	38200707	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:34841348;1allele=A/G;version=Hapmap2;RS=rs130999981;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	39072693	39072792	.	+	.	Name=Tassel_length;B73v2_pos=9:35648262;1allele=T/A;version=Hapmap2;RS=rs829176865;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	39490851	39490950	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:36095592;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	39490851	39490950	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:36095592;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	39490851	39490950	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:36095592;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	39596827	39596926	.	+	.	Name=Days_to_silk;B73v2_pos=9:36182232;1allele=T/C;version=Hapmap2;RS=rs810395043;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	39636627	39636726	.	+	.	Name=Leaf_length;B73v2_pos=9:36269095;1allele=T/C;version=Hapmap2;RS=rs833669253;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	39707594	39707693	.	+	.	Name=Days_to_silk;B73v2_pos=9:36292836;1allele=C/T;version=Hapmap2;RS=rs131001768;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	39818472	39818571	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:36405173;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	39939264	39939363	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:36520853;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	39966959	39967058	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:36548550;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	39969843	39969942	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:36551434;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	40165295	40165394	.	+	.	Name=Days_to_silk;B73v2_pos=9:36730180;1allele=G/T;version=Hapmap2;RS=rs801919179;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	40656668	40656767	.	+	.	Name=Days_to_silk;B73v2_pos=9:37233667;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	40672004	40672103	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:37248763;1allele=C/A;version=Hapmap2;RS=rs844799498;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	40705806	40705905	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:37282565;1allele=C/T;version=Hapmap2;RS=rs131003549;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	40733722	40733821	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:37310464;1allele=T/C;version=Hapmap2;RS=rs809228317;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	40786809	40786908	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:37363423;1allele=G/T;version=Hapmap2;RS=rs806649395;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	40834544	40834643	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:37411156;1allele=C/A;version=Hapmap2;RS=rs278676538;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	40837599	40837698	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:37414212;1allele=G/A;version=Hapmap2;RS=rs803721712;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	40924551	40924650	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:37500753;1allele=A/G;version=Hapmap2;RS=rs833490676;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	40926273	40926372	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:37502475;1allele=G/A;version=Hapmap1;RS=rs131717204;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	40936065	40936164	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:37512271;1allele=A/G;version=Hapmap2;RS=rs131004118;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	40941746	40941845	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:37517952;1allele=A/G;version=Hapmap2;RS=rs825153838;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	41021750	41021849	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:37570583;1allele=A/G;version=Hapmap2;RS=rs278677219;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	41122400	41122499	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:37595061;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	41152563	41152662	.	+	.	Name=Ear_row_number;B73v2_pos=9:37700512;1allele=C/T;version=Hapmap2;RS=rs131004587;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	41375298	41375397	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:37914884;1allele=G/C;version=Hapmap2;RS=rs815957661;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	41419293	41419392	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:37958884;1allele=C/T;version=Hapmap2;RS=rs813814116;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	41829650	41829749	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:38370019;1allele=G/A;version=Hapmap2;RS=rs278679870;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	42156141	42156240	.	+	.	Name=Glucose;B73v2_pos=9:38693920;1allele=G/A;version=Hapmap2;RS=rs829761827;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	42424909	42425008	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:38959708;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	42538628	42538727	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:39066987;1allele=C/T;version=Hapmap2;RS=rs849181328;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	42754422	42754521	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:39281289;1allele=A/G;version=Hapmap2;RS=rs842347486;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	42821534	42821633	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:39348402;1allele=C/T;version=Hapmap2;RS=rs840146301;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	42868987	42869086	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:39401975;1allele=T/G;version=Hapmap1;RS=rs131008636;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	42869161	42869260	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:39402149;1allele=T/C;version=Hapmap1;RS=rs131008643;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	42907600	42907699	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:39440589;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	42932857	42932956	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:39467065;1allele=A/G;version=Hapmap2;RS=rs848980782;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	43428450	43428548	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:39956396;1allele=G/A;version=Hapmap2;RS=rs814094838;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	43478593	43478692	.	+	.	Name=Ear_row_number;B73v2_pos=9:40006485;1allele=G/A;version=Hapmap2;RS=rs278684161;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	43633346	43633445	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:40157726;1allele=C/A;version=Hapmap2;RS=rs817101551;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	43979657	43979756	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:40494022;1allele=G/A;version=Hapmap2;RS=rs811717808;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	44013156	44013255	.	+	.	Name=Ear_height;B73v2_pos=9:40504941;1allele=G/A;version=Hapmap2;RS=rs801739343;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	44087416	44087515	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:40581187;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	44155678	44155777	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:40667004;1allele=A/G;version=Hapmap2;RS=rs278685311;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	44159071	44159170	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:40670397;1allele=A/C;version=Hapmap2;RS=rs278685378;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	44190762	44190861	.	+	.	Name=Glucose;B73v2_pos=9:40702091;1allele=A/C;version=Hapmap2;RS=rs847354066;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	44194335	44194434	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:40705666;1allele=A/C;version=Hapmap2;RS=rs849370382;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	44234792	44234891	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:40745764;1allele=T/C;version=Hapmap2;RS=rs131009643;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	44292977	44293076	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:40805196;1allele=T/G;version=Hapmap2;RS=rs816727370;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	44436479	44436578	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:155253490;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	44680000	44680099	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:41189402;1allele=T/C;version=Hapmap2;RS=rs817564109;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	44703107	44703206	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:41208639;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	44968942	44969041	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:41473437;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	45037902	45038001	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:41520144;1allele=T/C;version=Hapmap1;RS=rs131718475;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	45039531	45039630	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:41521773;1allele=C/A;version=Hapmap2;RS=rs278687943;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	45063584	45063683	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:41545705;1allele=T/C;version=Hapmap2;RS=rs1062045949;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	45075534	45075633	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:41557655;1allele=A/C;version=Hapmap2;RS=rs278688059;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	45099066	45099165	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:41581188;1allele=A/G;version=Hapmap2;RS=rs278688207;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	45127607	45127706	.	+	.	Name=Starch;B73v2_pos=5:192996427;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	45192538	45192637	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:41672161;1allele=A/T;version=Hapmap2;RS=rs278688395;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	45285445	45285544	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:41765245;1allele=A/G;version=Hapmap2;RS=rs816359183;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	45456269	45456368	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:41931159;1allele=A/T;version=Hapmap2;RS=rs1061385072;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	45469964	45470060	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:41943536;1allele=G/A;version=Hapmap2;RS=rs841869159;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	45791338	45791437	.	+	.	Name=Glucose;B73v2_pos=9:42278771;1allele=A/G;version=Hapmap2;RS=rs278689587;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	46204400	46204499	.	+	.	Name=Glucose;B73v2_pos=9:42647786;1allele=A/C;version=Hapmap2;RS=rs131013520;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	46216379	46216478	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:42659765;1allele=G/A;version=Hapmap2;RS=rs278690741;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	46258654	46258753	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:42702043;1allele=A/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	46315467	46315566	.	+	.	Name=Plant_height;B73v2_pos=9:42758861;1allele=T/A;version=Hapmap2;RS=rs827842190;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	46319161	46319260	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:42762555;1allele=C/T;version=Hapmap2;RS=rs820256391;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	46675456	46675555	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:43090172;1allele=G/C;version=Hapmap2;RS=rs1061422428;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	46837489	46837588	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:43244528;1allele=A/G;version=Hapmap2;RS=rs826859283;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	46839031	46839130	.	+	.	Name=Leaf_length;B73v2_pos=9:43246070;1allele=A/G;version=Hapmap2;RS=rs849192140;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	47205897	47205996	.	+	.	Name=Cob_diameter;B73v2_pos=9:43557254;1allele=A/T;version=Hapmap2;RS=rs278693166;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	47286394	47286493	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=5:264354;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	47393500	47393599	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:43742299;1allele=G/A;version=Hapmap2;RS=rs814004875;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	47526231	47526330	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:43885943;1allele=A/G;version=Hapmap2;RS=rs807959032;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	47661741	47661840	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:44025016;1allele=G/C;version=Hapmap2;RS=rs846875526;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	47661754	47661853	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:44025029;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	47718553	47718652	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:44082224;1allele=T/C;version=Hapmap2;RS=rs278694034;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	47718575	47718674	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:44082246;1allele=C/T;version=Hapmap2;RS=rs848815162;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	48065770	48065869	.	+	.	Name=Plant_height;B73v2_pos=6:29790035;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	48070698	48070797	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:44435800;1allele=-/+;version=Hapmap2;RS=rs832237381;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	48207085	48207184	.	+	.	Name=Tassel_length;B73v2_pos=9:44465460;1allele=C/G;version=Hapmap2;RS=rs278694595;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	48207694	48207793	.	+	.	Name=Cob_diameter;B73v2_pos=9:44466069;1allele=A/G;version=Hapmap2;RS=rs823050737;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	48209884	48209983	.	+	.	Name=Tassel_length;B73v2_pos=9:44468259;1allele=A/G;version=Hapmap2;RS=rs849296152;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	48211542	48211641	.	+	.	Name=Tassel_length;B73v2_pos=9:44469917;1allele=G/A;version=Hapmap2;RS=rs131016851;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	48217815	48217914	.	+	.	Name=Tassel_length;B73v2_pos=9:44476191;1allele=A/G;version=Hapmap2;RS=rs278694652;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	48219378	48219477	.	+	.	Name=Tassel_length;B73v2_pos=9:44477754;1allele=A/G;version=Hapmap2;RS=rs842840488;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	48219434	48219533	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:44477810;1allele=C/T;version=Hapmap2;RS=rs815850332;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	48221089	48221188	.	+	.	Name=Tassel_length;B73v2_pos=9:44479465;1allele=C/T;version=Hapmap2;RS=rs828214353;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	48228916	48229015	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:44487292;1allele=T/A;version=Hapmap2;RS=rs813772271;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	48228926	48229025	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:44487302;1allele=A/C;version=Hapmap2;RS=rs802062366;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	48228945	48229044	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:44487321;1allele=C/T;version=Hapmap2;RS=rs278694726;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	48447188	48447287	.	+	.	Name=Ear_row_number;B73v2_pos=9:44699980;1allele=G/A;version=Hapmap1;RS=rs131719706;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	48685192	48685291	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:44932332;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	48685193	48685292	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:44932333;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	48701585	48701684	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:44949948;1allele=G/A;version=Hapmap2;RS=rs814364975;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	48704408	48704507	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:44952771;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	48723500	48723599	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:44971867;1allele=A/G;version=Hapmap2;RS=rs1064237346;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	48741291	48741390	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:44989607;1allele=C/T;version=Hapmap2;RS=rs1061134146;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	48776088	48776187	.	+	.	Name=Ear_height;B73v2_pos=9:45033161;1allele=A/G;version=Hapmap2;RS=rs278695690;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	48793022	48793121	.	+	.	Name=Days_to_silk;B73v2_pos=9:45040416;1allele=C/A;version=Hapmap2;RS=rs131017355;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	48811476	48811575	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:45058870;1allele=G/C;version=Hapmap2;RS=rs278695797;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	48819412	48819511	.	+	.	Name=Ear_height;B73v2_pos=9:45068243;1allele=C/T;version=Hapmap2;RS=rs1061371653;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	48840684	48840783	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:45092870;1allele=C/T;version=Hapmap2;RS=rs804362732;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	48869385	48869484	.	+	.	Name=Ear_height;B73v2_pos=9:45121572;1allele=C/T;version=Hapmap2;RS=rs278695994;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	48997974	48998073	.	+	.	Name=Tassel_length;B73v2_pos=4:24200771;1allele=A/C;version=Hapmap2;RS=rs845986834;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	49023053	49023152	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:45294091;1allele=A/G;version=Hapmap2;RS=rs131719903;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	49024568	49024667	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:45295606;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	49060413	49060512	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:45328142;1allele=G/A;version=Hapmap2;RS=rs278696350;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	49061240	49061339	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:45328969;1allele=A/G;version=Hapmap2;RS=rs278696359;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	49069948	49070047	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:45337678;1allele=C/A;version=Hapmap2;RS=rs131017850;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	49085576	49085675	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:45353309;1allele=C/A;version=Hapmap2;RS=rs131017793;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	49087191	49087290	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:45354924;1allele=C/G;version=Hapmap2;RS=rs131017776;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	49087698	49087797	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:45355431;1allele=G/A;version=Hapmap2;RS=rs1061246079;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	49345885	49345984	.	+	.	Name=Protein;B73v2_pos=9:45580963;1allele=T/A;version=Hapmap2;RS=rs1062746544;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	49466846	49466945	.	+	.	Name=Tassel_length;B73v2_pos=9:45706483;1allele=T/G;version=Hapmap2;RS=rs832464717;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	49466894	49466993	.	+	.	Name=Tassel_length;B73v2_pos=9:45706531;1allele=A/T;version=Hapmap2;RS=rs804728303;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	49660893	49660992	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:205316860;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50078427	50078526	.	+	.	Name=Tassel_branch_number;B73v2_pos=7:169070954;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50115143	50115242	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:46376233;1allele=G/T;version=Hapmap1;RS=rs131720336;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50846935	50847034	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47066234;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50846935	50847034	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47066234;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50846983	50847082	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47066282;1allele=G/A;version=Hapmap1;RS=rs131720558;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50893496	50893595	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47112528;1allele=G/A;version=Hapmap2;RS=rs850233377;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50894585	50894684	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47113619;1allele=G/A;version=Hapmap2;RS=rs825818154;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50895833	50895932	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47114867;1allele=G/T;version=Hapmap2;RS=rs848807268;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	50896726	50896825	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47115760;1allele=T/C;version=Hapmap2;RS=rs278699940;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	50898190	50898289	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47117224;1allele=G/A;version=Hapmap2;RS=rs803197275;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50898956	50899055	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47117990;1allele=G/A;version=Hapmap2;RS=rs824727827;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50898956	50899055	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47117990;1allele=G/A;version=Hapmap2;RS=rs824727827;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50898956	50899055	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47117990;1allele=G/A;version=Hapmap2;RS=rs824727827;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50902631	50902730	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47121666;1allele=G/A;version=Hapmap2;RS=rs803154940;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	50904411	50904510	.	+	.	Name=Tassel_length;B73v2_pos=9:47124661;1allele=G/T;version=Hapmap2;RS=rs131018797;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	50928212	50928311	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47204868;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50928232	50928331	.	+	.	Name=Days_to_silk;B73v2_pos=9:47204848;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50928666	50928765	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47204414;1allele=G/A;version=Hapmap2;RS=rs817684455;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	50929322	50929421	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47203758;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50929372	50929471	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47203708;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50934869	50934968	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47198211;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50940747	50940846	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:47192853;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50940747	50940846	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47192853;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50963625	50963724	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47136634;1allele=C/A;version=Hapmap2;RS=rs819626660;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	50989310	50989397	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47221040;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50990581	50990680	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:47219757;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50991202	50991301	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47219136;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50992000	50992099	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47218338;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	50997328	50997427	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47213010;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	51116139	51116238	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47321848;1allele=A/G;version=Hapmap2;RS=rs828528032;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	51216450	51216549	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47425122;1allele=T/A;version=Hapmap2;RS=rs841185787;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	51272450	51272549	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47480125;1allele=C/T;version=Hapmap2;RS=rs849638130;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51277066	51277165	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:47484742;1allele=T/C;version=Hapmap2;RS=rs821411217;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	51298013	51298112	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47503697;1allele=C/T;version=Hapmap2;RS=rs846002351;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51313186	51313285	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:47510552;1allele=G/A;version=Hapmap2;RS=rs131019357;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	51348358	51348457	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47546876;1allele=C/T;version=Hapmap2;RS=rs840590600;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51350497	51350596	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47549015;1allele=C/T;version=Hapmap2;RS=rs278700721;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51350497	51350596	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:47549015;1allele=C/T;version=Hapmap2;RS=rs278700721;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51350497	51350596	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47549015;1allele=C/T;version=Hapmap2;RS=rs278700721;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51358905	51359004	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47557423;1allele=G/A;version=Hapmap2;RS=rs278700831;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	51390887	51390986	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47589408;1allele=T/G;version=Hapmap2;RS=rs845057885;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	51394553	51394652	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:47593074;1allele=G/A;version=Hapmap2;RS=rs278700927;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	51394553	51394652	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47593074;1allele=G/A;version=Hapmap2;RS=rs278700927;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	51394553	51394652	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47593074;1allele=G/A;version=Hapmap2;RS=rs278700927;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	51410021	51410120	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47608544;1allele=G/A;version=Hapmap2;RS=rs278700947;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	51417351	51417450	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47615875;1allele=C/T;version=Hapmap2;RS=rs817147597;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51417408	51417507	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:47615932;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	51417408	51417507	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:47615932;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	51417408	51417507	.	+	.	Name=Plant_height;B73v2_pos=9:47615932;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	51419376	51419475	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47617900;1allele=G/T;version=Hapmap2;RS=rs278701049;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	51420684	51420783	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47619210;1allele=G/A;version=Hapmap2;RS=rs131019866;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	51425492	51425591	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:47624018;1allele=C/A;version=Hapmap2;RS=rs841888094;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	51435270	51435369	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:47633799;1allele=A/G;version=Hapmap2;RS=rs131019968;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	51491967	51492066	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:47703789;1allele=A/G;version=Hapmap2;RS=rs131020061;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	51615983	51616082	.	+	.	Name=Tassel_branch_number;B73v2_pos=4:167193964;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	51645979	51646078	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:47862441;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	51756991	51757090	.	+	.	Name=Cob_diameter;B73v2_pos=9:47946466;1allele=T/C;version=Hapmap2;RS=rs813892435;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	51901682	51901781	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:48088076;1allele=C/T;version=Hapmap2;RS=rs806065635;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	51966535	51966634	.	+	.	Name=Cob_diameter;B73v2_pos=9:48152242;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	51976173	51976272	.	+	.	Name=Glucose;B73v2_pos=9:48161883;1allele=C/G;version=Hapmap2;RS=rs278701786;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	52088590	52088689	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:48286890;1allele=G/T;version=Hapmap2;RS=rs821203314;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	52618267	52618366	.	+	.	Name=Glucose;B73v2_pos=9:48823622;1allele=A/G;version=Hapmap2;RS=rs1060960427;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	52744670	52744769	.	+	.	Name=Ear_height;B73v2_pos=9:48943413;1allele=A/G;version=Hapmap2;RS=rs801413525;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	52778310	52778409	.	+	.	Name=Glucose;B73v2_pos=9:48977004;1allele=G/T;version=Hapmap2;RS=rs847841215;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	52802409	52802508	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:143929156;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	52866273	52866372	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:49064993;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	52981127	52981226	.	+	.	Name=Ear_height;B73v2_pos=9:49177017;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	52985606	52985705	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:49181496;1allele=A/G;version=Hapmap2;RS=rs278705178;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	53500816	53500915	.	+	.	Name=Cob_diameter;B73v2_pos=9:49696093;1allele=T/C;version=Hapmap1;RS=rs131721414;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	53732987	53733086	.	+	.	Name=Cob_diameter;B73v2_pos=9:49895554;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	54186113	54186212	.	+	.	Name=Cob_diameter;B73v2_pos=9:50355402;1allele=A/C;version=Hapmap2;RS=rs278707695;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	54208163	54208262	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:50377457;1allele=C/T;version=Hapmap2;RS=rs818900256;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	54869885	54869984	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:51043623;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	55004360	55004459	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:51143721;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	55200280	55200379	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:9709570;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	58194655	58194754	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:17045136;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	59117532	59117631	.	+	.	Name=NA;B73v2_pos=NA;1allele=NA;version=NA;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	63177455	63177554	.	+	.	Name=Leaf_width;B73v2_pos=3:216657610;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	63342762	63342861	.	+	.	Name=Cob_diameter;B73v2_pos=9:68694216;1allele=A/C;version=Hapmap1;RS=rs131726173;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	63439947	63440046	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:68597056;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	64529818	64529917	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:67716044;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	65056430	65056529	.	+	.	Name=Plant_height;B73v2_pos=9:67198100;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	65667469	65667568	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:203136879;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	65922955	65923054	.	+	.	Name=Plant_height;B73v2_pos=4:128375524;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	65922955	65923054	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=4:128375524;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	66871692	66871791	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:65200806;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	67066268	67066371	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:199387592;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	67238187	67238263	.	+	.	Name=Days_to_silk;B73v2_pos=1:259488011;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	68099589	68099688	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:63999897;1allele=C/T;version=Hapmap2;RS=rs825308178;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	68200923	68201022	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:63943339;1allele=C/T;version=Hapmap2;RS=rs131035332;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	68221508	68221607	.	+	.	Name=Plant_height;B73v2_pos=9:63886967;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	69887330	69887429	.	+	.	Name=Plant_height;B73v2_pos=9:62197451;1allele=A/C;version=Hapmap2;RS=rs836158875;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	69970250	69970349	.	+	.	Name=Cob_diameter;B73v2_pos=9:62282100;1allele=A/G;version=Hapmap2;RS=rs810731537;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	70081004	70081103	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:62393501;1allele=T/C;version=Hapmap1;RS=rs131730566;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	70081004	70081103	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:62393501;1allele=T/C;version=Hapmap1;RS=rs131730566;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	70215126	70215225	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:62515237;1allele=G/T;version=Hapmap1;RS=rs131730597;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	70277838	70277937	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:62581821;1allele=T/C;version=Hapmap2;RS=rs829725583;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	70383818	70383917	.	+	.	Name=Cob_diameter;B73v2_pos=9:61857209;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	70410542	70410641	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:61830485;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	70595513	70595612	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:61645230;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	70753153	70753252	.	+	.	Name=Height_above_ear;B73v2_pos=9:61481258;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	70783157	70783256	.	+	.	Name=Ear_row_number;B73v2_pos=9:61451254;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	70814468	70814567	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:61419944;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	70923148	70923247	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:61305551;1allele=T/C;version=Hapmap2;RS=rs840607023;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	70923173	70923272	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:61305526;1allele=G/T;version=Hapmap2;RS=rs278721425;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	70923491	70923590	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:61305208;1allele=+/-;version=Hapmap2;RS=rs813232333;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	70926143	70926242	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:61302555;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71181641	71181740	.	+	.	Name=Leaf_length;B73v2_pos=9:61047942;1allele=A/T;version=Hapmap2;RS=rs824652368;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	71378414	71378513	.	+	.	Name=Ear_height;B73v2_pos=9:60858530;1allele=T/C;version=Hapmap2;RS=rs820240751;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	71480590	71480689	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:60742863;1allele=C/T;version=Hapmap2;RS=rs832468165;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	71796674	71796773	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:60451440;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71797322	71797421	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:60450792;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71851380	71851479	.	+	.	Name=Ear_height;B73v2_pos=9:60405562;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71853861	71853960	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:60403081;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71864842	71864941	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:60391822;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71869121	71869220	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:60387468;1allele=/TAGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71973120	71973219	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:60273525;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	71992297	71992396	.	+	.	Name=Ear_height;B73v2_pos=9:60254348;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	72067586	72067685	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:60179435;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	72296974	72297073	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:59945126;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	72437270	72437369	.	+	.	Name=Total_amino_acids;B73v2_pos=9:59800394;1allele=C/T;version=Hapmap2;RS=rs131723883;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	72466868	72466967	.	+	.	Name=Leaf_length;B73v2_pos=9:59769945;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	72493626	72493725	.	+	.	Name=Ear_height;B73v2_pos=9:59742444;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	72623197	72623296	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:59615691;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	72909042	72909141	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:59329025;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	72956483	72956582	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:59283433;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73020171	73020270	.	+	.	Name=Glucose;B73v2_pos=9:59204162;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73095283	73095382	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:59160073;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73113592	73113691	.	+	.	Name=Plant_height;B73v2_pos=9:59141695;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73299089	73299188	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:58950495;1allele=G/A;version=Hapmap2;RS=rs833096177;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	73308986	73309085	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:58961367;1allele=T/G;version=Hapmap2;RS=rs726428572;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	73362396	73362495	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:58902136;1allele=C/T;version=Hapmap2;RS=rs846462016;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	73466343	73466442	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:58795939;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73484965	73485064	.	+	.	Name=Plant_height;B73v2_pos=9:58777316;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73486217	73486316	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:58776064;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73550358	73550457	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:58711729;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73801087	73801186	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:58470179;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73821834	73821933	.	+	.	Name=Plant_height;B73v2_pos=9:58449544;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73821866	73821965	.	+	.	Name=Plant_height;B73v2_pos=9:58449512;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73822536	73822635	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:58448842;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73891817	73891916	.	+	.	Name=Glucose;B73v2_pos=9:58379014;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73892324	73892423	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:58378507;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73895659	73895758	.	+	.	Name=Chlorophyll_B;B73v2_pos=9:58375172;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73961865	73961964	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:58309242;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73965718	73965817	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:58305389;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	73969116	73969215	.	+	.	Name=Plant_height;B73v2_pos=9:58301991;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	74026194	74026293	.	+	.	Name=Plant_height;B73v2_pos=9:58244911;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	74134033	74134132	.	+	.	Name=Stalk_strength;B73v2_pos=9:58134622;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	74204709	74204808	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:58063716;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75103799	75103898	.	+	.	Name=Glucose;B73v2_pos=9:57191508;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75181243	75181339	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:57118725;1allele=+/-;version=Hapmap2;RS=rs1061288594;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	75271262	75271361	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:57032233;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75290822	75290921	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:57012908;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75317578	75317677	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:56986142;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75317675	75317774	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:56986045;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75344271	75344370	.	+	.	Name=Ear_row_number;B73v2_pos=9:56959449;1allele=A/G;version=Hapmap2;RS=rs278712595;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	75396202	75396301	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:56861942;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75563806	75563905	.	+	.	Name=Ear_row_number;B73v2_pos=9:56697119;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	75659455	75659553	.	+	.	Name=Ear_height;B73v2_pos=9:56608008;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	76008697	76008796	.	+	.	Name=Ear_height;B73v2_pos=9:56255160;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	76063613	76063712	.	+	.	Name=Plant_height;B73v2_pos=9:56203513;1allele=C/T;version=Hapmap2;RS=rs849714913;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	76142229	76142328	.	+	.	Name=Plant_height;B73v2_pos=9:56126180;1allele=G/A;version=Hapmap2;RS=rs821252383;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	76250513	76250612	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:56019198;1allele=T/C;version=Hapmap2;RS=rs809715647;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	76276423	76276522	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:55993114;1allele=G/T;version=Hapmap2;RS=rs838680546;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	76276423	76276522	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:55993114;1allele=G/T;version=Hapmap2;RS=rs838680546;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	76338254	76338353	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:55931183;1allele=C/T;version=Hapmap2;RS=rs819987971;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	76352653	76352752	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:55916783;1allele=T/C;version=Hapmap2;RS=rs824451391;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	76375644	76375743	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:55893792;1allele=G/A;version=Hapmap2;RS=rs835789517;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	76384348	76384446	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:55885061;1allele=T/A;version=Hapmap2;RS=rs841850935;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	76388056	76388155	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:55881352;1allele=G/T;version=Hapmap2;RS=rs131025741;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	76399534	76399633	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:55869873;1allele=G/A;version=Hapmap2;RS=rs131722461;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	76418919	76419018	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:55850369;1allele=C/T;version=Hapmap2;RS=rs834333060;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	76434133	76434232	.	+	.	Name=Glucose;B73v2_pos=9:55835271;1allele=G/A;version=Hapmap2;RS=rs805902931;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	76575665	76575764	.	+	.	Name=Ear_height;B73v2_pos=9:55676021;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	76578379	76578478	.	+	.	Name=Plant_height;B73v2_pos=9:55678735;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	76726722	76726821	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:55545805;1allele=T/C;version=Hapmap2;RS=rs806184395;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	76821029	76821128	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:55475860;1allele=T/A;version=Hapmap2;RS=rs832956380;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	76823327	76823426	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:55473562;1allele=C/T;version=Hapmap2;RS=rs1064406443;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	77038983	77039082	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:55199802;1allele=T/C;version=Hapmap2;RS=rs131024469;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	78295226	78295325	.	+	.	Name=Plant_height;B73v2_pos=9:73081005;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	78381558	78381657	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:73193660;1allele=T/G;version=Hapmap2;RS=rs804257769;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	78607502	78607601	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:73393511;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	78609346	78609445	.	+	.	Name=Cob_diameter;B73v2_pos=9:73395355;1allele=C/T;version=Hapmap2;RS=rs1061332698;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	78611389	78611488	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:73397398;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	78911743	78911842	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:73700167;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	79487300	79487399	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:74284972;1allele=G/T;version=Hapmap2;RS=rs278735251;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	79719258	79719357	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:74531810;1allele=C/T;version=Hapmap2;RS=rs843386714;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	79822923	79823022	.	+	.	Name=Tassel_length;B73v2_pos=9:74632032;1allele=C/T;version=Hapmap2;RS=rs726957682;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	79823181	79823280	.	+	.	Name=Tassel_length;B73v2_pos=9:74632290;1allele=G/A;version=Hapmap2;RS=rs131048573;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	79855165	79855264	.	+	.	Name=Tassel_length;B73v2_pos=9:74664274;1allele=C/T;version=Hapmap2;RS=rs833100308;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	81491185	81491284	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76339317;1allele=T/C;version=Hapmap2;RS=rs841949188;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	81534780	81534879	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76288954;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	81589593	81589692	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76401554;1allele=G/T;version=Hapmap2;RS=rs278736549;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	81597215	81597314	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76409178;1allele=C/T;version=Hapmap2;RS=rs724356994;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	81629478	81629577	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76435357;1allele=G/A;version=Hapmap2;RS=rs727099401;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	81651829	81651928	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76457708;1allele=C/T;version=Hapmap2;RS=rs838595361;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	81665443	81665542	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76471323;1allele=A/T;version=Hapmap1;RS=rs131728437;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	81670669	81670768	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:76476549;1allele=C/A;version=Hapmap2;RS=rs278736652;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	81741777	81741876	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76534738;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	81878835	81878934	.	+	.	Name=Leaf_length;B73v2_pos=9:76671647;1allele=C/T;version=Hapmap2;RS=rs131050614;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	81984839	81984938	.	+	.	Name=Cob_diameter;B73v2_pos=9:76777330;1allele=T/C;version=Hapmap2;RS=rs1063946261;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	82025224	82025323	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:76818080;1allele=G/A;version=Hapmap2;RS=rs811615707;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	82243548	82243647	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:77053366;1allele=T/A;version=Hapmap2;RS=rs725434979;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	82301598	82301697	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:77146448;1allele=A/G;version=Hapmap2;RS=rs808023922;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	82305767	82305866	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:77150612;1allele=A/C;version=Hapmap2;RS=rs841618460;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	82350849	82350948	.	+	.	Name=Protein;B73v2_pos=9:77195696;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	82441634	82441733	.	+	.	Name=Protein;B73v2_pos=9:77289230;1allele=G/A;version=Hapmap2;RS=rs849942621;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	82446373	82446472	.	+	.	Name=Protein;B73v2_pos=9:77293969;1allele=T/C;version=Hapmap2;RS=rs278737839;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	82457749	82457848	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:77305352;1allele=G/A;version=Hapmap2;RS=rs1060549475;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	82458136	82458235	.	+	.	Name=Protein;B73v2_pos=9:77305739;1allele=C/T;version=Hapmap2;RS=rs1063379046;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	82487241	82487340	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:9129023;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	82502599	82502698	.	+	.	Name=Tassel_length;B73v2_pos=9:77339491;1allele=T/G;version=Hapmap2;RS=rs843122370;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	82754063	82754162	.	+	.	Name=Leaf_length;B73v2_pos=9:77597548;1allele=C/T;version=Hapmap2;RS=rs810431312;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	82830884	82830983	.	+	.	Name=Tassel_length;B73v2_pos=9:77587689;1allele=G/A;version=Hapmap2;RS=rs131051926;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	82850946	82851045	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:77663030;1allele=A/G;version=Hapmap2;RS=rs819270179;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	82890017	82890116	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:77693957;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	82918119	82918218	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:77727729;1allele=C/A;version=Hapmap2;RS=rs841211897;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	82928881	82928980	.	+	.	Name=Cob_diameter;B73v2_pos=9:77738491;1allele=A/G;version=Hapmap2;RS=rs1061960685;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	83050742	83050841	.	+	.	Name=Protein;B73v2_pos=9:77860758;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	83106091	83106190	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:77910096;1allele=G/A;version=Hapmap2;RS=rs838565612;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	83250659	83250758	.	+	.	Name=Plant_height;B73v2_pos=9:78058945;1allele=C/G;version=Hapmap2;RS=rs804303036;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	83253802	83253901	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:78062088;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	83343497	83343596	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:78151794;1allele=C/T;version=Hapmap2;RS=rs816777019;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	84818551	84818650	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:79611889;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	84908077	84908176	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=1:159578990;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	85383373	85383472	.	+	.	Name=Days_to_silk;B73v2_pos=9:80192907;1allele=T/A;version=Hapmap2;RS=rs806561827;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	85803849	85803948	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:80594988;1allele=C/G;version=Hapmap2;RS=rs828396047;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	85992151	85992250	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:80773470;1allele=C/T;version=Hapmap2;RS=rs843015125;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	86128470	86128569	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:80907462;1allele=G/A;version=Hapmap2;RS=rs278745467;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	86247266	86247365	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:81018327;1allele=T/C;version=Hapmap2;RS=rs131059361;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	86374298	86374397	.	+	.	Name=Ear_height;B73v2_pos=9:81141539;1allele=C/G;version=Hapmap2;RS=rs131059588;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	86696958	86697057	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:81488908;1allele=T/G;version=Hapmap2;RS=rs131059912;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	86865309	86865408	.	+	.	Name=Protein;B73v2_pos=9:81670740;1allele=T/C;version=Hapmap2;RS=rs278746650;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	86922180	86922278	.	+	.	Name=Ear_height;B73v2_pos=9:81727254;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	86922185	86922283	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:81727259;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	86970098	86970197	.	+	.	Name=Days_to_silk;B73v2_pos=9:81774241;1allele=C/G;version=Hapmap2;RS=rs1061130075;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	86994344	86994443	.	+	.	Name=Days_to_silk;B73v2_pos=9:81797683;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	87423497	87423596	.	+	.	Name=Protein;B73v2_pos=9:82152408;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	87527395	87527494	.	+	.	Name=Protein;B73v2_pos=9:82255760;1allele=C/T;version=Hapmap2;RS=rs131062762;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	87768816	87768915	.	+	.	Name=Nitrate;B73v2_pos=5:170140432;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	87830253	87830352	.	+	.	Name=Protein;B73v2_pos=9:82547208;1allele=C/T;version=Hapmap2;RS=rs807822709;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	88124229	88124328	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:82826199;1allele=C/A;version=Hapmap2;RS=rs840668381;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	88346291	88346390	.	+	.	Name=Cob_diameter;B73v2_pos=9:83050731;1allele=G/A;version=Hapmap1;RS=rs131730988;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	88372550	88372649	.	+	.	Name=Cob_diameter;B73v2_pos=9:83076920;1allele=G/A;version=Hapmap2;RS=rs1062800366;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	88389875	88389974	.	+	.	Name=Cob_diameter;B73v2_pos=9:83094247;1allele=C/T;version=Hapmap2;RS=rs131065412;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	88390535	88390634	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:83094907;1allele=C/T;version=Hapmap2;RS=rs827347988;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	88393657	88393756	.	+	.	Name=Cob_diameter;B73v2_pos=9:83098029;1allele=A/G;version=Hapmap2;RS=rs1063190450;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	88507834	88507933	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:83198584;1allele=T/A;version=Hapmap2;RS=rs838616794;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	88745173	88745272	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:83401637;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	88769782	88769881	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:83453499;1allele=C/T;version=Hapmap2;RS=rs278751251;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	88816119	88816218	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:83499841;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	88890713	88890812	.	+	.	Name=Plant_height;B73v2_pos=9:83567447;1allele=C/T;version=Hapmap2;RS=rs131067227;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	88957949	88958048	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:83630491;1allele=C/A;version=Hapmap2;RS=rs815648695;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	88984499	88984598	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:83652980;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	89003114	89003213	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:83634366;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	89003118	89003217	.	+	.	Name=Ear_height;B73v2_pos=9:83634362;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	89017724	89017801	.	+	.	Name=Protein;B73v2_pos=9:83676705;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	89052497	89052596	.	+	.	Name=Ear_height;B73v2_pos=9:83720505;1allele=G/A;version=Hapmap2;RS=rs278752288;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	89138942	89139041	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:83807476;1allele=C/A;version=Hapmap2;RS=rs1060880354;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	89197078	89197177	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:83861126;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	89202544	89202643	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:83887584;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	89288108	89288207	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:83955744;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	89459431	89459530	.	+	.	Name=Plant_height;B73v2_pos=9:84118234;1allele=C/A;version=Hapmap2;RS=rs816980937;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	89667705	89667804	.	+	.	Name=Ear_row_number;B73v2_pos=9:84322012;1allele=A/G;version=Hapmap2;RS=rs829439983;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	89999315	89999414	.	+	.	Name=Protein;B73v2_pos=9:84644158;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	90861233	90861332	.	+	.	Name=Protein;B73v2_pos=9:85508685;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	90865457	90865556	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:85512909;1allele=T/C;version=Hapmap2;RS=rs825771473;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	90865842	90865941	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:85513294;1allele=G/C;version=Hapmap2;RS=rs846958592;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	90867133	90867232	.	+	.	Name=Protein;B73v2_pos=9:85514585;1allele=C/T;version=Hapmap2;RS=rs833662816;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	91129102	91129201	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:85797208;1allele=C/T;version=Hapmap2;RS=rs841227465;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	91150976	91151075	.	+	.	Name=Leaf_length;B73v2_pos=9:85819082;1allele=C/T;version=Hapmap2;RS=rs845560978;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	91199103	91199202	.	+	.	Name=Leaf_length;B73v2_pos=9:85867208;1allele=A/G;version=Hapmap2;RS=rs131071771;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	91304663	91304762	.	+	.	Name=Protein;B73v2_pos=9:85988496;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	91375482	91375581	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:86088561;1allele=G/A;version=Hapmap2;RS=rs821365219;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	91477387	91477486	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:86171709;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	91485052	91485151	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:86164044;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	91565330	91565429	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:86240861;1allele=G/C;version=Hapmap2;RS=rs846542421;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	91611330	91611429	.	+	.	Name=Ear_height;B73v2_pos=9:86287143;1allele=G/A;version=Hapmap2;RS=rs1063913833;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	91723086	91723185	.	+	.	Name=Ear_height;B73v2_pos=9:86398647;1allele=A/G;version=Hapmap2;RS=rs824117158;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	91821534	91821633	.	+	.	Name=Plant_height;B73v2_pos=9:86496927;1allele=A/G;version=Hapmap2;RS=rs278758077;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	91853601	91853700	.	+	.	Name=Ear_height;B73v2_pos=9:86529008;1allele=A/G;version=Hapmap2;RS=rs838535540;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	91859203	91859302	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:86534610;1allele=C/T;version=Hapmap2;RS=rs278758182;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	91984272	91984371	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:86660724;1allele=G/C;version=Hapmap2;RS=rs810259982;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	91995267	91995366	.	+	.	Name=Ear_height;B73v2_pos=9:86671720;1allele=A/G;version=Hapmap2;RS=rs131074049;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	92088796	92088895	.	+	.	Name=Days_to_silk;B73v2_pos=9:86764978;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	92254181	92254280	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:86971847;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	92602813	92602912	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=2:214490565;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	92618074	92618173	.	+	.	Name=Ear_height;B73v2_pos=9:87285938;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	92620718	92620817	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:87288582;1allele=T/G;version=Hapmap2;RS=rs131732748;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	92692486	92692585	.	+	.	Name=Days_to_silk;B73v2_pos=9:87359449;1allele=G/A;version=Hapmap2;RS=rs838458573;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	92695821	92695920	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:87362784;1allele=G/A;version=Hapmap2;RS=rs725820237;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	92715507	92715606	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:87382478;1allele=C/T;version=Hapmap2;RS=rs824089673;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	92748773	92748872	.	+	.	Name=Days_to_silk;B73v2_pos=9:87415780;1allele=C/T;version=Hapmap2;RS=rs847558692;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	92804877	92804976	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:87471890;1allele=C/A;version=Hapmap2;RS=rs818030666;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	92996241	92996340	.	+	.	Name=Days_to_silk;B73v2_pos=9:87615464;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	93162430	93162529	.	+	.	Name=Ear_height;B73v2_pos=9:87816299;1allele=C/T;version=Hapmap2;RS=rs131075418;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	93176924	93177023	.	+	.	Name=Ear_height;B73v2_pos=9:87830791;1allele=T/G;version=Hapmap2;RS=rs278761051;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	93176924	93177023	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:87830791;1allele=T/G;version=Hapmap2;RS=rs278761051;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	93213776	93213875	.	+	.	Name=Ear_height;B73v2_pos=9:87908733;1allele=T/C;version=Hapmap2;RS=rs278761212;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	93233595	93233694	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:87930323;1allele=T/C;version=Hapmap2;RS=rs832444108;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	93245936	93246035	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:87942669;1allele=T/C;version=Hapmap1;RS=rs131733051;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	93452840	93452939	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:88125817;1allele=C/T;version=Hapmap2;RS=rs131076085;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	93453382	93453481	.	+	.	Name=Ear_height;B73v2_pos=9:88126359;1allele=C/T;version=Hapmap2;RS=rs831262938;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	93458072	93458171	.	+	.	Name=Ear_height;B73v2_pos=9:88131049;1allele=G/T;version=Hapmap2;RS=rs828898128;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	93520020	93520119	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:88189291;1allele=A/G;version=Hapmap2;RS=rs1063071827;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	93520022	93520121	.	+	.	Name=Ear_height;B73v2_pos=9:88189293;1allele=T/G;version=Hapmap2;RS=rs831533817;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	93531482	93531581	.	+	.	Name=Ear_height;B73v2_pos=9:88200751;1allele=C/T;version=Hapmap2;RS=rs823334317;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	93535108	93535207	.	+	.	Name=Ear_height;B73v2_pos=9:88204378;1allele=G/T;version=Hapmap2;RS=rs829951874;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	93569639	93569738	.	+	.	Name=Ear_row_number;B73v2_pos=9:88239383;1allele=A/G;version=Hapmap2;RS=rs820215360;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	93615379	93615478	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:88285131;1allele=A/G;version=Hapmap2;RS=rs849580930;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	93618844	93618943	.	+	.	Name=Plant_height;B73v2_pos=9:88288596;1allele=C/T;version=Hapmap2;RS=rs131076332;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	93619016	93619115	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:88288768;1allele=A/G;version=Hapmap2;RS=rs131733240;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	93622112	93622211	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:88291864;1allele=A/G;version=Hapmap2;RS=rs724458660;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	93623628	93623727	.	+	.	Name=Ear_height;B73v2_pos=9:88293380;1allele=A/T;version=Hapmap2;RS=rs810327872;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	93778385	93778484	.	+	.	Name=Plant_height;B73v2_pos=9:88447417;1allele=T/A;version=Hapmap2;RS=rs813433430;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	93819280	93819379	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:88489418;1allele=A/C;version=Hapmap2;RS=rs825316599;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	93840257	93840356	.	+	.	Name=Plant_height;B73v2_pos=9:88510398;1allele=C/G;version=Hapmap2;RS=rs1064621583;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	93886337	93886436	.	+	.	Name=Ear_row_number;B73v2_pos=9:88555802;1allele=C/T;version=Hapmap2;RS=rs841478671;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	93896002	93896101	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:88565467;1allele=G/A;version=Hapmap2;RS=rs803704324;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	93898341	93898440	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:88567806;1allele=C/T;version=Hapmap2;RS=rs837274037;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	93899534	93899633	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:88568911;1allele=C/T;version=Hapmap2;RS=rs816242626;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	93918434	93918533	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:88588215;1allele=A/G;version=Hapmap2;RS=rs724796818;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	93925539	93925638	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:88595320;1allele=T/G;version=Hapmap2;RS=rs840955882;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	93952563	93952662	.	+	.	Name=Plant_height;B73v2_pos=9:88621889;1allele=C/G;version=Hapmap1;RS=rs131733460;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	94218918	94219017	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:88885344;1allele=C/T;version=Hapmap2;RS=rs834034529;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	94355230	94355329	.	+	.	Name=Protein;B73v2_pos=9:89019093;1allele=G/A;version=Hapmap2;RS=rs1064627656;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	94355549	94355648	.	+	.	Name=Protein;B73v2_pos=9:89019412;1allele=T/G;version=Hapmap2;RS=rs278764195;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	94369220	94369319	.	+	.	Name=Protein;B73v2_pos=9:89033723;1allele=G/A;version=Hapmap2;RS=rs131733965;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	94369298	94369397	.	+	.	Name=Protein;B73v2_pos=9:89033801;1allele=/TCTGCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	94712312	94712411	.	+	.	Name=Cob_diameter;B73v2_pos=9:89343037;1allele=A/G;version=Hapmap2;RS=rs724316539;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	94723297	94723396	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:89332052;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	94731008	94731107	.	+	.	Name=Protein;B73v2_pos=9:89394522;1allele=A/G;version=Hapmap2;RS=rs1062327717;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	94803612	94803711	.	+	.	Name=Protein;B73v2_pos=9:89465572;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	94987697	94987795	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:89653553;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95055414	95055513	.	+	.	Name=Ear_height;B73v2_pos=9:89720573;1allele=G/A;version=Hapmap2;RS=rs278765520;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	95057019	95057118	.	+	.	Name=Ear_height;B73v2_pos=9:89722178;1allele=A/G;version=Hapmap2;RS=rs839739675;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	95059041	95059140	.	+	.	Name=Ear_height;B73v2_pos=9:89724200;1allele=A/G;version=Hapmap2;RS=rs835844342;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	95063542	95063641	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:89728701;1allele=A/G;version=Hapmap2;RS=rs278765623;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	95064194	95064293	.	+	.	Name=Leaf_length;B73v2_pos=9:89729353;1allele=G/A;version=Hapmap2;RS=rs828193178;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	95151067	95151166	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:89815945;1allele=C/T;version=Hapmap2;RS=rs812762988;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	95170784	95170883	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:89835669;1allele=A/G;version=Hapmap2;RS=rs131079057;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	95441071	95441170	.	+	.	Name=Ear_height;B73v2_pos=9:90110414;1allele=T/A;version=Hapmap2;RS=rs824912107;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	95463636	95463735	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:90132781;1allele=C/T;version=Hapmap2;RS=rs278766502;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	95464960	95465059	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:90134105;1allele=A/G;version=Hapmap2;RS=rs826124433;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	95615673	95615772	.	+	.	Name=Leaf_length;B73v2_pos=9:90264631;1allele=A/C;version=Hapmap2;RS=rs815097683;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	95619512	95619611	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:90268569;1allele=T/A;version=Hapmap2;RS=rs278766875;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	95636956	95637055	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:90286023;1allele=C/A;version=Hapmap1;RS=rs131734598;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	95636956	95637055	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:90286023;1allele=C/A;version=Hapmap1;RS=rs131734598;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	95685543	95685642	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:90334785;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95685646	95685745	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:90334888;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95692528	95692627	.	+	.	Name=Ear_height;B73v2_pos=9:90364254;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95696747	95696846	.	+	.	Name=Ear_height;B73v2_pos=9:90368473;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95700502	95700601	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:90372229;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95700791	95700890	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:90372518;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95700952	95701051	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:90372679;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	95710930	95711029	.	+	.	Name=Ear_height;B73v2_pos=9:90382658;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	96134783	96134882	.	+	.	Name=Ear_height;B73v2_pos=9:90802531;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	96134783	96134882	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:90802531;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	96140913	96141012	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:90870310;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	96289475	96289574	.	+	.	Name=Ear_row_number;B73v2_pos=9:90939585;1allele=A/G;version=Hapmap2;RS=rs838606792;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	96297621	96297720	.	+	.	Name=Ear_row_number;B73v2_pos=9:90947731;1allele=T/G;version=Hapmap2;RS=rs821097455;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	96331167	96331266	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:90980850;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	96362212	96362311	.	+	.	Name=Protein;B73v2_pos=9:91032366;1allele=C/T;version=Hapmap2;RS=rs1062181726;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	96431775	96431874	.	+	.	Name=Ear_height;B73v2_pos=9:91102161;1allele=T/C;version=Hapmap2;RS=rs278768427;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	96745150	96745249	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:91416312;1allele=C/A;version=Hapmap2;RS=rs131081757;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	96968570	96968669	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:91632959;1allele=G/A;version=Hapmap2;RS=rs806055011;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	96976874	96976973	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:91641263;1allele=G/A;version=Hapmap2;RS=rs278769080;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	97028125	97028224	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:91649938;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	97067515	97067614	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:91744601;1allele=G/T;version=Hapmap2;RS=rs821327809;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	97069415	97069514	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:91746501;1allele=G/T;version=Hapmap1;RS=rs131735303;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	97131226	97131325	.	+	.	Name=Leaf_width;B73v2_pos=9:91806578;1allele=G/A;version=Hapmap2;RS=rs822563463;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	97139591	97139690	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:91829999;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	97241010	97241109	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:91901129;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	97280247	97280346	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:91940196;1allele=C/G;version=Hapmap2;RS=rs131083334;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	97287249	97287348	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:91947198;1allele=G/A;version=Hapmap2;RS=rs810949130;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	97349520	97349619	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:92029379;1allele=G/A;version=Hapmap2;RS=rs278769677;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	97354463	97354562	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:92034322;1allele=G/A;version=Hapmap2;RS=rs1062642052;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	97394367	97394466	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:92074229;1allele=T/A;version=Hapmap2;RS=rs131083529;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	97426913	97427012	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:92112602;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	97430503	97430602	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:92114119;1allele=T/C;version=Hapmap2;RS=rs1062384359;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	97461770	97461869	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:92145815;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	97554271	97554370	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:92256664;1allele=T/A;version=Hapmap2;RS=rs804454727;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	97681422	97681521	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:92346522;1allele=G/T;version=Hapmap2;RS=rs837274670;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	97967405	97967504	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:92622828;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	97983563	97983662	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:92638986;1allele=A/G;version=Hapmap2;RS=rs844322092;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	98004884	98004983	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:92659635;1allele=C/T;version=Hapmap2;RS=rs131084337;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	98005473	98005572	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:92660225;1allele=T/G;version=Hapmap1;RS=rs131735699;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	98130097	98130196	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:92804103;1allele=A/G;version=Hapmap2;RS=rs845002065;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	98276323	98276422	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:92951393;1allele=A/G;version=Hapmap2;RS=rs841264335;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	98469963	98470062	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:174432859;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	98480978	98481077	.	+	.	Name=Protein;B73v2_pos=9:93151531;1allele=A/G;version=Hapmap2;RS=rs726796880;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	98803210	98803309	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:93469832;1allele=G/A;version=Hapmap2;RS=rs834573835;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	98972290	98972389	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:93637049;1allele=G/A;version=Hapmap2;RS=rs830313192;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	99012166	99012265	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:93683217;1allele=C/A;version=Hapmap2;RS=rs834284719;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	99370544	99370643	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:94040277;1allele=T/C;version=Hapmap2;RS=rs848045785;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	99378002	99378100	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:94047738;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	99395050	99395149	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:20850208;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	99497390	99497489	.	+	.	Name=Cob_diameter;B73v2_pos=9:94168758;1allele=G/C;version=Hapmap2;RS=rs839247716;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	99959530	99959629	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:94644478;1allele=G/A;version=Hapmap2;RS=rs804123520;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	100173289	100173388	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:94894818;1allele=C/T;version=Hapmap2;RS=rs131088965;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	100179973	100180072	.	+	.	Name=Ear_row_number;B73v2_pos=9:94901502;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	100359675	100359774	.	+	.	Name=Tassel_length;B73v2_pos=9:95072733;1allele=A/G;version=Hapmap2;RS=rs131089084;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	100360357	100360456	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:95073415;1allele=T/A;version=Hapmap2;RS=rs131089090;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	100561403	100561502	.	+	.	Name=Ear_row_number;B73v2_pos=9:95269871;1allele=C/T;version=Hapmap2;RS=rs278773603;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	100752977	100753076	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:95453967;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	100754802	100754901	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:95455792;1allele=T/G;version=Hapmap2;RS=rs725442268;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	100836211	100836310	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:95564542;1allele=C/T;version=Hapmap2;RS=rs131090433;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	100836211	100836310	.	+	.	Name=Ear_height;B73v2_pos=9:95564542;1allele=C/T;version=Hapmap2;RS=rs131090433;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	100930677	100930776	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:95522668;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	100937103	100937202	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:95516241;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	101028238	101028337	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:95723387;1allele=G/A;version=Hapmap2;RS=rs278774929;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	101159842	101159941	.	+	.	Name=Chlorophyll_A;B73v2_pos=2:27360256;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	101328618	101328717	.	+	.	Name=Leaf_length;B73v2_pos=9:96021396;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	101397535	101397634	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:96090243;1allele=T/C;version=Hapmap2;RS=rs812954013;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	101421594	101421693	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:96157842;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	101750013	101750112	.	+	.	Name=Ear_height;B73v2_pos=9:96454660;1allele=C/T;version=Hapmap2;RS=rs1060664161;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	101928717	101928816	.	+	.	Name=Ear_height;B73v2_pos=9:96622775;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102013792	102013891	.	+	.	Name=Plant_height;B73v2_pos=9:96706636;1allele=A/G;version=Hapmap2;RS=rs278776111;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	102013851	102013950	.	+	.	Name=Plant_height;B73v2_pos=9:96706695;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102013860	102013959	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:96706704;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102014807	102014906	.	+	.	Name=Plant_height;B73v2_pos=9:96707569;1allele=T/G;version=Hapmap2;RS=rs278776112;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	102015106	102015205	.	+	.	Name=Days_to_silk;B73v2_pos=9:96707868;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102022105	102022204	.	+	.	Name=Plant_height;B73v2_pos=9:96714867;1allele=G/T;version=Hapmap2;RS=rs841283216;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	102037908	102038007	.	+	.	Name=Days_to_silk;B73v2_pos=9:96730789;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102041557	102041656	.	+	.	Name=Ear_height;B73v2_pos=9:96734438;1allele=C/G;version=Hapmap2;RS=rs131737878;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	102043042	102043141	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:96735923;1allele=T/C;version=Hapmap2;RS=rs801617224;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	102044771	102044870	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:96737652;1allele=T/C;version=Hapmap2;RS=rs278776376;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	102063821	102063920	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:96756703;1allele=T/G;version=Hapmap2;RS=rs278776450;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	102064009	102064108	.	+	.	Name=Days_to_silk;B73v2_pos=9:96756891;1allele=C/G;version=Hapmap2;RS=rs131092030;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	102094977	102095076	.	+	.	Name=Ear_height;B73v2_pos=9:96787386;1allele=A/T;version=Hapmap2;RS=rs131092139;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	102350922	102351021	.	+	.	Name=Total_amino_acids;B73v2_pos=9:97035160;1allele=A/G;version=Hapmap2;RS=rs278777453;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	102371838	102371937	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:97056082;1allele=A/G;version=Hapmap2;RS=rs1062226028;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	102391257	102391356	.	+	.	Name=Tassel_length;B73v2_pos=9:97073694;1allele=A/G;version=Hapmap2;RS=rs838172983;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	102534939	102535038	.	+	.	Name=Nodes_per_plant;B73v2_pos=2:16332408;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102563486	102563585	.	+	.	Name=Total_amino_acids;B73v2_pos=9:97254379;1allele=C/T;version=Hapmap2;RS=rs806735142;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	102584527	102584626	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:97275598;1allele=C/T;version=Hapmap2;RS=rs131092844;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	102622748	102622847	.	+	.	Name=Ear_height;B73v2_pos=9:97314870;1allele=A/G;version=Hapmap2;RS=rs836602313;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	102712466	102712565	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:97394857;1allele=C/A;version=Hapmap2;RS=rs824682581;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	102713251	102713350	.	+	.	Name=Protein;B73v2_pos=9:97395642;1allele=T/C;version=Hapmap2;RS=rs837001300;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	102744598	102744697	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:97424254;1allele=C/T;version=Hapmap2;RS=rs726467393;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	102752460	102752559	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:97432116;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102902441	102902540	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:97587610;1allele=T/A;version=Hapmap2;RS=rs806115820;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	102906431	102906530	.	+	.	Name=Ear_row_number;B73v2_pos=9:97591600;1allele=A/G;version=Hapmap2;RS=rs131093529;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	102941667	102941767	.	+	.	Name=Leaf_length;B73v2_pos=9:97626912;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102942549	102942648	.	+	.	Name=Leaf_length;B73v2_pos=9:97627791;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	102953469	102953568	.	+	.	Name=Plant_height;B73v2_pos=9:97638711;1allele=C/T;version=Hapmap2;RS=rs726926170;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	102982597	102982696	.	+	.	Name=Leaf_length;B73v2_pos=9:97667839;1allele=A/G;version=Hapmap2;RS=rs1063773984;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	103036994	103037093	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:97722230;1allele=G/A;version=Hapmap2;RS=rs278778228;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	103105772	103105871	.	+	.	Name=Protein;B73v2_pos=9:97789527;1allele=C/G;version=Hapmap2;RS=rs131093817;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	103208628	103208727	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:97895673;1allele=A/T;version=Hapmap2;RS=rs840939953;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	103258980	103259079	.	+	.	Name=Ear_height;B73v2_pos=9:97948741;1allele=A/C;version=Hapmap2;RS=rs824971624;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	103292861	103292960	.	+	.	Name=Ear_row_number;B73v2_pos=9:97983620;1allele=A/G;version=Hapmap2;RS=rs131738673;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	103557570	103557669	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:98259031;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	103609598	103609697	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:98310952;1allele=G/C;version=Hapmap2;RS=rs849766981;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	103636272	103636371	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:98337631;1allele=G/A;version=Hapmap2;RS=rs1063575651;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	103677726	103677825	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:98378140;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	103801570	103801669	.	+	.	Name=Days_to_silk;B73v2_pos=9:98501506;1allele=T/C;version=Hapmap2;RS=rs278779086;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	103882421	103882520	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:98582254;1allele=G/T;version=Hapmap2;RS=rs1064189635;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	103895217	103895316	.	+	.	Name=Ear_height;B73v2_pos=9:98595051;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	103896123	103896222	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:98595957;1allele=C/A;version=Hapmap2;RS=rs278779185;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	103896146	103896245	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:98595980;1allele=A/G;version=Hapmap2;RS=rs278779186;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	103896258	103896357	.	+	.	Name=Ear_height;B73v2_pos=9:98596092;1allele=A/G;version=Hapmap2;RS=rs850331049;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	103896975	103897074	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:98596809;1allele=A/G;version=Hapmap2;RS=rs278779204;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	103897348	103897447	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:98597182;1allele=C/A;version=Hapmap2;RS=rs278779208;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	103939527	103939626	.	+	.	Name=Height_above_ear;B73v2_pos=9:98635272;1allele=G/A;version=Hapmap2;RS=rs829438867;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	103939887	103939983	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:98635631;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	103995546	103995645	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:98690109;1allele=A/T;version=Hapmap2;RS=rs810547639;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	103997135	103997234	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:98691698;1allele=A/G;version=Hapmap2;RS=rs849454581;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104199963	104200062	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:98898797;1allele=A/C;version=Hapmap2;RS=rs828435892;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	104200701	104200800	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:98899535;1allele=G/A;version=Hapmap2;RS=rs823827733;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	104207909	104208008	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:98906611;1allele=A/G;version=Hapmap2;RS=rs832927949;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104211851	104211950	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:98917176;1allele=G/A;version=Hapmap2;RS=rs816889764;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	104212028	104212127	.	+	.	Name=Ear_height;B73v2_pos=9:98917353;1allele=G/A;version=Hapmap2;RS=rs278779534;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104219753	104219852	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:98925078;1allele=A/G;version=Hapmap2;RS=rs835115739;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104225546	104225645	.	+	.	Name=Ear_height;B73v2_pos=9:98930871;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104226700	104226799	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:98932025;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104270260	104270359	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:98944625;1allele=G/C;version=Hapmap1;RS=rs131739284;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	104270414	104270513	.	+	.	Name=Ear_height;B73v2_pos=9:98944779;1allele=G/A;version=Hapmap2;RS=rs131739285;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104279069	104279168	.	+	.	Name=Ear_height;B73v2_pos=9:98953440;1allele=G/C;version=Hapmap2;RS=rs131095591;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	104297759	104297858	.	+	.	Name=Ear_height;B73v2_pos=9:98999195;1allele=C/T;version=Hapmap2;RS=rs1061158601;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	104316324	104316423	.	+	.	Name=Ear_height;B73v2_pos=9:99017770;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104316373	104316472	.	+	.	Name=Ear_height;B73v2_pos=9:99017819;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104316768	104316867	.	+	.	Name=Ear_height;B73v2_pos=9:99018214;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104316771	104316870	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:99018217;1allele=A/G;version=Hapmap2;RS=rs811658546;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	104319655	104319754	.	+	.	Name=Ear_height;B73v2_pos=9:99021101;1allele=A/T;version=Hapmap2;RS=rs131739317;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	104320180	104320279	.	+	.	Name=Ear_height;B73v2_pos=9:99021626;1allele=T/C;version=Hapmap2;RS=rs131739327;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	104321424	104321523	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:99022868;1allele=A/G;version=Hapmap2;RS=rs849800308;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104377183	104377282	.	+	.	Name=Stalk_strength;B73v2_pos=9:99077826;1allele=T/A;version=Hapmap2;RS=rs822468783;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	104395553	104395652	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:99096196;1allele=C/G;version=Hapmap2;RS=rs131095857;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	104460775	104460874	.	+	.	Name=Leaf_length;B73v2_pos=9:99149770;1allele=C/T;version=Hapmap2;RS=rs811874380;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	104465404	104465503	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:99154399;1allele=T/C;version=Hapmap2;RS=rs842972819;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	104491041	104491140	.	+	.	Name=Ear_height;B73v2_pos=9:99181380;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104551967	104552066	.	+	.	Name=Ear_height;B73v2_pos=9:99243371;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104559847	104559946	.	+	.	Name=Ear_height;B73v2_pos=9:99251921;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104560719	104560818	.	+	.	Name=Ear_height;B73v2_pos=9:99252793;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104631133	104631232	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:99311688;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104631134	104631233	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:99311689;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104657783	104657882	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:99346043;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104679676	104679775	.	+	.	Name=Stalk_strength;B73v2_pos=9:99359338;1allele=G/A;version=Hapmap2;RS=rs847834378;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	104682520	104682619	.	+	.	Name=Stalk_strength;B73v2_pos=9:99362182;1allele=CCTCCC/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104710224	104710323	.	+	.	Name=Ear_height;B73v2_pos=9:99389886;1allele=G/C;version=Hapmap2;RS=rs131096210;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	104736728	104736827	.	+	.	Name=Ear_height;B73v2_pos=9:99416392;1allele=C/T;version=Hapmap2;RS=rs817508865;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	104736787	104736886	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:99416451;1allele=T/C;version=Hapmap2;RS=rs131739650;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	104737360	104737459	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:99417024;1allele=T/A;version=Hapmap2;RS=rs806689915;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	104738592	104738691	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:99418256;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104739025	104739124	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:99418689;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104752589	104752688	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:99432254;1allele=A/G;version=Hapmap2;RS=rs843927698;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104755452	104755551	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:99435117;1allele=C/A;version=Hapmap2;RS=rs1063725634;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	104759011	104759110	.	+	.	Name=Glucose;B73v2_pos=9:99438676;1allele=G/A;version=Hapmap2;RS=rs1062098776;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	104773003	104773102	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:99452666;1allele=A/G;version=Hapmap2;RS=rs724724095;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104777941	104778040	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:99457604;1allele=C/T;version=Hapmap2;RS=rs808559502;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	104778414	104778513	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:99458077;1allele=C/T;version=Hapmap2;RS=rs846644925;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	104779120	104779219	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:99458783;1allele=C/T;version=Hapmap1;RS=rs131739712;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	104791169	104791268	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:99470835;1allele=A/G;version=Hapmap2;RS=rs726482080;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	104816322	104816421	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:99495990;1allele=G/T;version=Hapmap2;RS=rs833909087;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	104851773	104851872	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:99530970;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104932404	104932503	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:99613436;1allele=T/C;version=Hapmap2;RS=rs804856399;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	104944882	104944981	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:99625914;1allele=/TTGTTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	104962425	104962524	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:99643457;1allele=G/A;version=Hapmap2;RS=rs1063256621;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	105146769	105146868	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:99849701;1allele=G/A;version=Hapmap2;RS=rs278780533;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	105146790	105146889	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:99849722;1allele=G/A;version=Hapmap2;RS=rs131739917;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	105182475	105182574	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:99806829;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	105294899	105294998	.	+	.	Name=Plant_height;B73v2_pos=9:99956175;1allele=T/A;version=Hapmap2;RS=rs829922598;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	105373758	105373857	.	+	.	Name=Ear_height;B73v2_pos=9:100048817;1allele=G/A;version=Hapmap2;RS=rs817806637;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	105412135	105412234	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:100088119;1allele=G/A;version=Hapmap2;RS=rs808899352;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	105436394	105436493	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:100112310;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	105552542	105552641	.	+	.	Name=Stalk_strength;B73v2_pos=9:100227344;1allele=G/A;version=Hapmap2;RS=rs131098172;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	105635706	105635805	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:100305809;1allele=T/A;version=Hapmap2;RS=rs834554577;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	105638444	105638543	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:100308547;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	105763133	105763232	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:100430533;1allele=C/A;version=Hapmap2;RS=rs803042114;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	105910105	105910204	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:100578184;1allele=G/A;version=Hapmap2;RS=rs838390896;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	105928293	105928392	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:100595772;1allele=T/C;version=Hapmap2;RS=rs849396847;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	106047831	106047930	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:100715619;1allele=A/C;version=Hapmap2;RS=rs833544493;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	106212650	106212749	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:100879371;1allele=A/T;version=Hapmap2;RS=rs131100155;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	106213830	106213929	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:100880551;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	106570649	106570748	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:101225491;1allele=G/T;version=Hapmap2;RS=rs844186273;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	106578275	106578374	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:101233118;1allele=A/G;version=Hapmap2;RS=rs843327598;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	106598859	106598958	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:101252493;1allele=C/T;version=Hapmap2;RS=rs831612442;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	106619835	106619934	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:101273468;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	106621198	106621297	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:101274831;1allele=C/T;version=Hapmap2;RS=rs833076246;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	106685793	106685892	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:101338938;1allele=T/C;version=Hapmap2;RS=rs831454596;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	106734492	106734591	.	+	.	Name=Leaf_length;B73v2_pos=9:101386031;1allele=A/G;version=Hapmap2;RS=rs278782693;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	106737354	106737453	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:101388768;1allele=C/G;version=Hapmap2;RS=rs816754230;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	106739748	106739847	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:101391162;1allele=A/G;version=Hapmap1;RS=rs131740915;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	106829590	106829689	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:101473314;1allele=C/T;version=Hapmap2;RS=rs131101276;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	106831792	106831891	.	+	.	Name=Leaf_length;B73v2_pos=9:101475516;1allele=A/G;version=Hapmap2;RS=rs836351743;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	106885873	106885972	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:101529612;1allele=C/A;version=Hapmap2;RS=rs278782853;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	106990742	106990841	.	+	.	Name=Tassel_length;B73v2_pos=6:79022155;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	107048205	107048304	.	+	.	Name=Protein;B73v2_pos=9:101687527;1allele=C/T;version=Hapmap2;RS=rs726981864;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	107048326	107048425	.	+	.	Name=Protein;B73v2_pos=9:101687648;1allele=T/C;version=Hapmap2;RS=rs131741211;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	107050068	107050167	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:101689390;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	107064531	107064630	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:101703853;1allele=A/C;version=Hapmap2;RS=rs1064777575;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	107066160	107066259	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:101705482;1allele=G/A;version=Hapmap2;RS=rs836700830;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	107101245	107101344	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:101740109;1allele=G/A;version=Hapmap2;RS=rs824530462;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	107107730	107107829	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:101746594;1allele=C/A;version=Hapmap2;RS=rs839242147;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	107113142	107113241	.	+	.	Name=Tassel_length;B73v2_pos=9:101752006;1allele=T/C;version=Hapmap2;RS=rs801512901;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	107123883	107123982	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:101762747;1allele=A/G;version=Hapmap2;RS=rs131101777;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	107184332	107184431	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:101824955;1allele=C/T;version=Hapmap2;RS=rs824205648;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	107186026	107186125	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:101826649;1allele=C/G;version=Hapmap2;RS=rs1062024575;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	107476798	107476897	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:102080867;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	107561471	107561570	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:102194034;1allele=C/T;version=Hapmap2;RS=rs726102151;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	107598512	107598611	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:249714238;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	107745919	107746018	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:102369435;1allele=G/A;version=Hapmap2;RS=rs727212083;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	107777932	107778031	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:102400697;1allele=C/T;version=Hapmap2;RS=rs726829304;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	107884997	107885096	.	+	.	Name=Stalk_strength;B73v2_pos=9:102512196;1allele=C/T;version=Hapmap2;RS=rs829364537;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	107950447	107950546	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:102577492;1allele=A/G;version=Hapmap2;RS=rs1063946375;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	108132747	108132846	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:102787801;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108277828	108277927	.	+	.	Name=Ear_height;B73v2_pos=9:102895526;1allele=C/A;version=Hapmap2;RS=rs278784344;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	108281642	108281741	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:102899340;1allele=T/C;version=Hapmap2;RS=rs811718937;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	108291708	108291807	.	+	.	Name=Ear_height;B73v2_pos=9:102908724;1allele=C/T;version=Hapmap2;RS=rs131103733;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108311818	108311917	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:102928996;1allele=G/A;version=Hapmap2;RS=rs131103874;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	108312531	108312630	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:102929709;1allele=A/G;version=Hapmap2;RS=rs1064020755;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	108312531	108312630	.	+	.	Name=Plant_height;B73v2_pos=9:102929709;1allele=A/G;version=Hapmap2;RS=rs1064020755;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	108313103	108313202	.	+	.	Name=Ear_height;B73v2_pos=9:102930281;1allele=C/T;version=Hapmap2;RS=rs1061523720;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	108313230	108313329	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:102930408;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108313230	108313329	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:102930408;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108313669	108313768	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:102930847;1allele=A/G;version=Hapmap2;RS=rs131103883;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	108313669	108313768	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:102930847;1allele=A/G;version=Hapmap2;RS=rs131103883;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	108313669	108313768	.	+	.	Name=Plant_height;B73v2_pos=9:102930847;1allele=A/G;version=Hapmap2;RS=rs131103883;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	108317038	108317137	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:102934217;1allele=C/A;version=Hapmap2;RS=rs810394760;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	108345126	108345225	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:102962244;1allele=G/A;version=Hapmap2;RS=rs812087391;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	108350452	108350551	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:102967570;1allele=G/T;version=Hapmap2;RS=rs802260785;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	108352261	108352360	.	+	.	Name=Total_amino_acids;B73v2_pos=9:102969379;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108408026	108408125	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:103025154;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108412954	108413053	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:103030082;1allele=C/T;version=Hapmap2;RS=rs806230592;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108439845	108439944	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:103078195;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108444800	108444899	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:103073240;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108463103	108463202	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:103054935;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108464175	108464274	.	+	.	Name=Ear_height;B73v2_pos=9:103053863;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108472820	108472919	.	+	.	Name=Ear_height;B73v2_pos=9:103045221;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108502331	108502430	.	+	.	Name=Ear_height;B73v2_pos=9:103123370;1allele=C/T;version=Hapmap2;RS=rs1062422906;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	108652940	108653039	.	+	.	Name=Plant_height;B73v2_pos=9:103247987;1allele=G/T;version=Hapmap2;RS=rs132523775;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	108653746	108653845	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103248793;1allele=T/C;version=Hapmap2;RS=rs131104664;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108674735	108674834	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103303153;1allele=T/C;version=Hapmap2;RS=rs131104699;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108674735	108674834	.	+	.	Name=Plant_height;B73v2_pos=9:103303153;1allele=T/C;version=Hapmap2;RS=rs131104699;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108674735	108674834	.	+	.	Name=Ear_height;B73v2_pos=9:103303153;1allele=T/C;version=Hapmap2;RS=rs131104699;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108675723	108675822	.	+	.	Name=Plant_height;B73v2_pos=9:103304141;1allele=T/C;version=Hapmap2;RS=rs131104713;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108675723	108675822	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:103304141;1allele=T/C;version=Hapmap2;RS=rs131104713;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108675723	108675822	.	+	.	Name=Ear_height;B73v2_pos=9:103304141;1allele=T/C;version=Hapmap2;RS=rs131104713;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108690875	108690974	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103319297;1allele=G/A;version=Hapmap2;RS=rs278784963;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	108691480	108691579	.	+	.	Name=Ear_height;B73v2_pos=9:103319902;1allele=T/C;version=Hapmap2;RS=rs131104743;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	108701283	108701382	.	+	.	Name=Plant_height;B73v2_pos=9:103329705;1allele=T/G;version=Hapmap2;RS=rs829236149;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	108701387	108701486	.	+	.	Name=Ear_height;B73v2_pos=9:103329809;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108701387	108701486	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103329809;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108717743	108717842	.	+	.	Name=Plant_height;B73v2_pos=9:103346163;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108718993	108719092	.	+	.	Name=Ear_height;B73v2_pos=9:103347413;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108719241	108719340	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103347661;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108736523	108736622	.	+	.	Name=Total_amino_acids;B73v2_pos=9:103364943;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108829363	108829462	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:103452029;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	108859471	108859570	.	+	.	Name=Leaf_width;B73v2_pos=9:103422520;1allele=T/C;version=Hapmap2;RS=rs808075301;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	108893605	108893704	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:103514056;1allele=C/T;version=Hapmap2;RS=rs131105188;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	108893605	108893704	.	+	.	Name=Plant_height;B73v2_pos=9:103514056;1allele=C/T;version=Hapmap2;RS=rs131105188;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	109011228	109011327	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:103654881;1allele=G/A;version=Hapmap2;RS=rs1063418424;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109011228	109011327	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103654881;1allele=G/A;version=Hapmap2;RS=rs1063418424;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109036015	109036114	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103676771;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	109036015	109036114	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:103676771;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	109041242	109041341	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103682000;1allele=A/G;version=Hapmap2;RS=rs278785336;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	109041673	109041772	.	+	.	Name=Plant_height;B73v2_pos=9:103682431;1allele=G/A;version=Hapmap2;RS=rs1064100138;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109041673	109041772	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103682431;1allele=G/A;version=Hapmap2;RS=rs1064100138;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109050341	109050440	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:103691099;1allele=T/C;version=Hapmap2;RS=rs839783313;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	109089028	109089127	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=4:179727085;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	109098641	109098740	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:103747908;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	109245013	109245112	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:103896188;1allele=G/A;version=Hapmap2;RS=rs1062016941;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109266532	109266631	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:103917713;1allele=C/T;version=Hapmap2;RS=rs831850026;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	109267208	109267307	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:103918389;1allele=A/G;version=Hapmap2;RS=rs1063982105;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109397549	109397648	.	+	.	Name=Nodes_to_ear;B73v2_pos=8:121756984;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	109466418	109466517	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:104115910;1allele=T/C;version=Hapmap2;RS=rs820647605;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	109467999	109468098	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:104117491;1allele=A/G;version=Hapmap2;RS=rs813070457;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109576074	109576173	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:104212475;1allele=T/C;version=Hapmap2;RS=rs804764638;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	109782808	109782907	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:104455902;1allele=G/A;version=Hapmap2;RS=rs1063075572;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109784130	109784229	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:104457224;1allele=C/G;version=Hapmap2;RS=rs726635977;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	109807645	109807744	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:104480235;1allele=T/C;version=Hapmap2;RS=rs826523278;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	109807680	109807779	.	+	.	Name=Leaf_length;B73v2_pos=9:104480270;1allele=T/A;version=Hapmap2;RS=rs726345251;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	109808986	109809085	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:104481576;1allele=T/G;version=Hapmap2;RS=rs812195902;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	109815699	109815798	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:104488289;1allele=G/A;version=Hapmap2;RS=rs1061606023;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	109928340	109928439	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:104644978;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	109989984	109990083	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:104748294;1allele=G/A;version=Hapmap2;RS=rs809196985;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	110015080	110015179	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:104778693;1allele=G/A;version=Hapmap2;RS=rs815656966;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	110047783	110047882	.	+	.	Name=Ear_row_number;B73v2_pos=9:104813817;1allele=G/A;version=Hapmap2;RS=rs804791647;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	110096330	110096429	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:104864693;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	110107406	110107505	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:104877182;1allele=C/T;version=Hapmap2;RS=rs724491580;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	110269903	110270002	.	+	.	Name=Tassel_length;B73v2_pos=9:105030551;1allele=A/G;version=Hapmap2;RS=rs824910267;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	110313926	110314025	.	+	.	Name=Leaf_width;B73v2_pos=9:105074576;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	110315959	110316058	.	+	.	Name=Leaf_width;B73v2_pos=9:105076609;1allele=-/+;version=Hapmap2;RS=rs834025225;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	110316065	110316164	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:105076715;1allele=G/A;version=Hapmap1;RS=rs834804113;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	110317362	110317461	.	+	.	Name=Leaf_width;B73v2_pos=9:105078012;1allele=G/C;version=Hapmap2;RS=rs835545299;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	110317583	110317682	.	+	.	Name=Leaf_width;B73v2_pos=9:105078233;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	110317865	110317964	.	+	.	Name=Leaf_width;B73v2_pos=9:105078515;1allele=A/C;version=Hapmap1;RS=rs132524677;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	110317907	110318006	.	+	.	Name=Leaf_width;B73v2_pos=9:105078557;1allele=T/C;version=Hapmap1;RS=rs132524678;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	110318284	110318383	.	+	.	Name=Leaf_width;B73v2_pos=9:105078934;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	110320390	110320489	.	+	.	Name=Leaf_width;B73v2_pos=9:105081040;1allele=C/T;version=Hapmap2;RS=rs821695433;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	110372732	110372831	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:105133385;1allele=G/A;version=Hapmap2;RS=rs819520068;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	110372887	110372986	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:105133540;1allele=C/G;version=Hapmap2;RS=rs843862057;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	110456350	110456449	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:105226429;1allele=G/A;version=Hapmap2;RS=rs819553243;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	110475149	110475248	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:105245229;1allele=G/T;version=Hapmap1;RS=rs132524914;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	110650835	110650934	.	+	.	Name=Leaf_width;B73v2_pos=9:105422301;1allele=G/T;version=Hapmap2;RS=rs727321303;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	110651892	110651991	.	+	.	Name=Leaf_width;B73v2_pos=9:105423358;1allele=C/T;version=Hapmap2;RS=rs818667723;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	110654075	110654174	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:105425541;1allele=A/T;version=Hapmap2;RS=rs278786693;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	110671935	110672034	.	+	.	Name=Leaf_width;B73v2_pos=9:105443401;1allele=G/A;version=Hapmap2;RS=rs849488275;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	110672157	110672256	.	+	.	Name=Leaf_width;B73v2_pos=9:105443623;1allele=G/A;version=Hapmap2;RS=rs833069367;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	110712984	110713083	.	+	.	Name=Leaf_width;B73v2_pos=9:105484273;1allele=C/G;version=Hapmap2;RS=rs811235415;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	110718387	110718486	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:105489676;1allele=A/G;version=Hapmap2;RS=rs1062939526;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	110748716	110748815	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:105518813;1allele=T/G;version=Hapmap2;RS=rs725355304;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	110757334	110757433	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:105527431;1allele=A/T;version=Hapmap1;RS=rs833648278;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	110759405	110759504	.	+	.	Name=Leaf_width;B73v2_pos=9:105529502;1allele=A/C;version=Hapmap2;RS=rs841349795;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	110816599	110816698	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:105586373;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	111060470	111060569	.	+	.	Name=Stalk_strength;B73v2_pos=9:105823397;1allele=-/+;version=Hapmap2;RS=rs843486348;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	111440572	111440671	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:107179036;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	111661546	111661645	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:106960367;1allele=C/T;version=Hapmap2;RS=rs811788372;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	111880291	111880390	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:107409674;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	111890682	111890781	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:107418655;1allele=C/T;version=Hapmap2;RS=rs822564779;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	111891035	111891134	.	+	.	Name=Leaf_width;B73v2_pos=9:107419008;1allele=T/C;version=Hapmap2;RS=rs132526143;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	111931971	111932070	.	+	.	Name=Tassel_branch_number;B73v2_pos=5:141848461;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	111940973	111941072	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:107470417;1allele=G/A;version=Hapmap2;RS=rs804635544;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	112090318	112090417	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:107606582;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	112217994	112218093	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:107795972;1allele=A/G;version=Hapmap2;RS=rs831347392;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	112337805	112337904	.	+	.	Name=Cob_diameter;B73v2_pos=9:107907129;1allele=G/A;version=Hapmap2;RS=rs810104188;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	112466072	112466171	.	+	.	Name=Protein;B73v2_pos=9:108018616;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	112487369	112487468	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:107997317;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	112494424	112494523	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:107990262;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	112494424	112494523	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:107990262;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	112552893	112552992	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:108115924;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	112599677	112599776	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:108155790;1allele=C/T;version=Hapmap2;RS=rs825118136;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	112606365	112606464	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:108162480;1allele=C/T;version=Hapmap2;RS=rs819140414;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	112734384	112734483	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:108288614;1allele=C/T;version=Hapmap1;RS=rs132526722;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	112769366	112769465	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:117247335;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	112798085	112798184	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:108352332;1allele=C/T;version=Hapmap1;RS=rs131111918;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	112887924	112888023	.	+	.	Name=Ear_height;B73v2_pos=9:108430978;1allele=T/C;version=Hapmap2;RS=rs278790818;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	112913565	112913664	.	+	.	Name=Ear_height;B73v2_pos=9:108456621;1allele=A/G;version=Hapmap2;RS=rs131112167;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	112958101	112958200	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:108500350;1allele=G/T;version=Hapmap2;RS=rs832414819;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	112963798	112963897	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:108506137;1allele=T/C;version=Hapmap2;RS=rs801417331;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	112967428	112967527	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:108509768;1allele=G/T;version=Hapmap2;RS=rs836672765;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	112972662	112972761	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:108515002;1allele=G/A;version=Hapmap2;RS=rs817948612;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	112976669	112976768	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:108558956;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	113075522	113075621	.	+	.	Name=Ear_height;B73v2_pos=9:108613538;1allele=C/T;version=Hapmap2;RS=rs824157456;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	113250118	113250217	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:108780965;1allele=A/G;version=Hapmap2;RS=rs835897058;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	113260483	113260582	.	+	.	Name=Ear_height;B73v2_pos=9:108791669;1allele=G/A;version=Hapmap2;RS=rs827507248;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	113711054	113711153	.	+	.	Name=Ear_row_number;B73v2_pos=9:109238528;1allele=G/T;version=Hapmap2;RS=rs802295487;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	113725361	113725460	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:109252835;1allele=C/T;version=Hapmap2;RS=rs1062041654;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	114031618	114031717	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:109550160;1allele=A/G;version=Hapmap2;RS=rs821084053;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	114763357	114763456	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110070816;1allele=C/G;version=Hapmap2;RS=rs727471121;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	114884072	114884171	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:110155227;1allele=G/A;version=Hapmap2;RS=rs840271143;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	114906678	114906777	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:110177835;1allele=G/A;version=Hapmap2;RS=rs840405780;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	114908112	114908211	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:110179269;1allele=C/A;version=Hapmap2;RS=rs816508034;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	114982696	114982795	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110241921;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	115080701	115080800	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110338974;1allele=A/G;version=Hapmap2;RS=rs833182564;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	115109229	115109328	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110367505;1allele=C/A;version=Hapmap2;RS=rs834563839;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	115109232	115109331	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110367508;1allele=G/A;version=Hapmap2;RS=rs841563512;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	115203886	115203985	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110490210;1allele=T/G;version=Hapmap2;RS=rs833288848;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	115204179	115204278	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:110490503;1allele=T/C;version=Hapmap2;RS=rs1061675863;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	115207283	115207382	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:110493607;1allele=A/C;version=Hapmap1;RS=rs132528529;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	115207853	115207952	.	+	.	Name=Stalk_strength;B73v2_pos=9:110494177;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	115221027	115221126	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110478850;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	115223201	115223300	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110476676;1allele=G/A;version=Hapmap2;RS=rs842597343;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	115300364	115300463	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:110545684;1allele=G/T;version=Hapmap2;RS=rs833658750;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	115605791	115605890	.	+	.	Name=Cob_diameter;B73v2_pos=8:25947985;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	115673693	115673792	.	+	.	Name=Ear_row_number;B73v2_pos=9:110918586;1allele=C/T;version=Hapmap2;RS=rs1062371991;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	115674342	115674441	.	+	.	Name=Leaf_length;B73v2_pos=9:110919235;1allele=A/G;version=Hapmap2;RS=rs845502977;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	115676788	115676887	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:110921681;1allele=G/A;version=Hapmap2;RS=rs726923865;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	115682211	115682310	.	+	.	Name=Ear_row_number;B73v2_pos=9:110927104;1allele=A/G;version=Hapmap2;RS=rs810061499;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	115683570	115683669	.	+	.	Name=Days_to_silk;B73v2_pos=9:110928463;1allele=G/T;version=Hapmap2;RS=rs802458906;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	115829007	115829106	.	+	.	Name=Days_to_silk;B73v2_pos=8:121818207;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	116691126	116691225	.	+	.	Name=Ear_row_number;B73v2_pos=9:111474082;1allele=T/C;version=Hapmap1;RS=rs132529043;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	116696488	116696587	.	+	.	Name=Ear_row_number;B73v2_pos=9:111479445;1allele=C/T;version=Hapmap2;RS=rs132529050;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	116763771	116763870	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:111550422;1allele=T/C;version=Hapmap2;RS=rs839194482;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	116843498	116843597	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:111610188;1allele=A/G;version=Hapmap2;RS=rs818251416;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	116847820	116847919	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:111614509;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	117272952	117273051	.	+	.	Name=Leaf_width;B73v2_pos=9:112045675;1allele=C/A;version=Hapmap2;RS=rs823039241;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	117331781	117331880	.	+	.	Name=Leaf_width;B73v2_pos=9:112105765;1allele=A/T;version=Hapmap2;RS=rs837903169;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	117410906	117411005	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:112208039;1allele=T/C;version=Hapmap2;RS=rs825391040;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	117411660	117411759	.	+	.	Name=Plant_height;B73v2_pos=9:112208793;1allele=C/G;version=Hapmap2;RS=rs131117088;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	117411929	117412028	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:112209062;1allele=A/G;version=Hapmap2;RS=rs726030711;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	117496942	117497041	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:112308335;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	117519981	117520080	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:112332712;1allele=T/A;version=Hapmap2;RS=rs804355754;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	117522690	117522789	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:112335421;1allele=A/T;version=Hapmap2;RS=rs801412965;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	117523899	117523998	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:112336630;1allele=G/C;version=Hapmap2;RS=rs843560866;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	117524123	117524222	.	+	.	Name=Leaf_width;B73v2_pos=9:112336854;1allele=A/G;version=Hapmap2;RS=rs724201609;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	117524455	117524554	.	+	.	Name=Leaf_width;B73v2_pos=9:112337186;1allele=A/C;version=Hapmap1;RS=rs132529746;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	117582978	117583077	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:112431173;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	117582978	117583077	.	+	.	Name=Leaf_width;B73v2_pos=9:112431173;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	117925728	117925827	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:112774208;1allele=T/C;version=Hapmap2;RS=rs836408038;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	117979381	117979480	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:112829450;1allele=A/T;version=Hapmap2;RS=rs822646234;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	117979392	117979491	.	+	.	Name=Leaf_width;B73v2_pos=9:112829461;1allele=C/T;version=Hapmap2;RS=rs829428058;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	118107232	118107331	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:112944350;1allele=C/T;version=Hapmap2;RS=rs810293826;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	118115401	118115500	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:112952519;1allele=A/T;version=Hapmap2;RS=rs837211135;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	118173028	118173127	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:113010161;1allele=C/A;version=Hapmap2;RS=rs821638138;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	118239902	118240001	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:113057595;1allele=C/T;version=Hapmap2;RS=rs278794647;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	118293618	118293717	.	+	.	Name=Leaf_length;B73v2_pos=9:113122179;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	118329362	118329461	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:209199539;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	118438773	118438871	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:113244111;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	118457021	118457120	.	+	.	Name=Chlorophyll_B;B73v2_pos=1:297968676;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	118501891	118501990	.	+	.	Name=Nodes_per_plant;B73v2_pos=3:232119547;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	118511586	118511685	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:113376873;1allele=C/T;version=Hapmap2;RS=rs813715416;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	118564325	118564424	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:113419227;1allele=G/A;version=Hapmap2;RS=rs278794881;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	118564685	118564784	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:113419587;1allele=G/A;version=Hapmap2;RS=rs834432256;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	118564899	118564998	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:113419801;1allele=A/G;version=Hapmap2;RS=rs829250774;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	118568317	118568416	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:113423219;1allele=A/G;version=Hapmap2;RS=rs813786148;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	118570494	118570593	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:113425398;1allele=A/C;version=Hapmap2;RS=rs278794950;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	118632872	118632971	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:113487632;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	118633473	118633572	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:113488233;1allele=G/A;version=Hapmap2;RS=rs843996082;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	118635270	118635369	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:113490030;1allele=G/A;version=Hapmap2;RS=rs822897718;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	118638456	118638555	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:113493216;1allele=C/T;version=Hapmap2;RS=rs841907309;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	118666616	118666715	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:113521336;1allele=C/A;version=Hapmap2;RS=rs823621294;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	118668421	118668520	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:113523141;1allele=A/G;version=Hapmap2;RS=rs812236158;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	118753169	118753268	.	+	.	Name=Ear_row_number;B73v2_pos=9:113607137;1allele=T/C;version=Hapmap2;RS=rs278795274;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	118753678	118753777	.	+	.	Name=Ear_row_number;B73v2_pos=9:113607646;1allele=C/T;version=Hapmap2;RS=rs834179223;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	118841292	118841391	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:160483688;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	118858787	118858886	.	+	.	Name=Tassel_length;B73v2_pos=9:113715299;1allele=T/C;version=Hapmap2;RS=rs808219667;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	118859370	118859469	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:113715882;1allele=A/C;version=Hapmap2;RS=rs835011463;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	118898534	118898633	.	+	.	Name=Tassel_length;B73v2_pos=9:113755053;1allele=A/G;version=Hapmap2;RS=rs836197007;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	118931938	118932037	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:113788058;1allele=A/C;version=Hapmap1;RS=rs132531014;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	118934081	118934180	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:113790201;1allele=G/T;version=Hapmap2;RS=rs814332062;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	118958076	118958175	.	+	.	Name=Ear_row_number;B73v2_pos=9:113814205;1allele=G/A;version=Hapmap2;RS=rs1060522483;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	119293509	119293608	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:114159033;1allele=G/T;version=Hapmap2;RS=rs278796609;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	119293733	119293832	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:114159257;1allele=C/A;version=Hapmap2;RS=rs278796613;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	119293733	119293832	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:114159257;1allele=C/A;version=Hapmap2;RS=rs278796613;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	119293764	119293863	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:114159288;1allele=C/G;version=Hapmap2;RS=rs278796614;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	119293764	119293863	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:114159288;1allele=C/G;version=Hapmap2;RS=rs278796614;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	119293974	119294073	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:114159498;1allele=G/T;version=Hapmap2;RS=rs132531149;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	119294106	119294205	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:114159630;1allele=C/G;version=Hapmap2;RS=rs278796618;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	119294106	119294205	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:114159630;1allele=C/G;version=Hapmap2;RS=rs278796618;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	119529156	119529255	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:114387430;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120178292	120178391	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:114962210;1allele=C/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120178329	120178428	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:114962247;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120178329	120178428	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:114962247;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120178329	120178428	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:114962247;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120183117	120183216	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:114967035;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120192914	120193013	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:114976832;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120225445	120225544	.	+	.	Name=Ear_row_number;B73v2_pos=9:115009373;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120235301	120235400	.	+	.	Name=Leaf_length;B73v2_pos=9:115019229;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120235301	120235400	.	+	.	Name=Ear_height;B73v2_pos=9:115019229;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120236382	120236481	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:115020310;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120270084	120270183	.	+	.	Name=Ear_row_number;B73v2_pos=9:115053305;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120272329	120272428	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:115055551;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120381074	120381173	.	+	.	Name=Leaf_length;B73v2_pos=9:115156022;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120388568	120388667	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:115163516;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120394559	120394658	.	+	.	Name=Ear_height;B73v2_pos=9:115180252;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120581520	120581619	.	+	.	Name=Ear_row_number;B73v2_pos=9:115378834;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120587682	120587781	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:115384996;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120588029	120588128	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:115385343;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120693954	120694053	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:115491248;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120696385	120696484	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:115493679;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120697580	120697679	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:115494874;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120833438	120833537	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:115626535;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120962367	120962466	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:115765152;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	120966285	120966384	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:115769070;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121141683	121141782	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:115926743;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121161680	121161779	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:115949549;1allele=A/G;version=Hapmap2;RS=rs803783732;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	121164529	121164628	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:115952398;1allele=A/G;version=Hapmap2;RS=rs724461706;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	121202742	121202841	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:115990609;1allele=T/C;version=Hapmap2;RS=rs813911459;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	121308956	121309055	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:116092664;1allele=G/A;version=Hapmap2;RS=rs817264108;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	121446738	121446837	.	+	.	Name=Ear_height;B73v2_pos=9:116231946;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121449335	121449434	.	+	.	Name=Total_amino_acids;B73v2_pos=9:116234543;1allele=T/G;version=Hapmap2;RS=rs827362585;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	121449930	121450029	.	+	.	Name=Ear_row_number;B73v2_pos=9:116235138;1allele=G/C;version=Hapmap1;RS=rs132532394;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	121474325	121474424	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:116259528;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121475705	121475804	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:116260908;1allele=G/C;version=Hapmap1;RS=rs131119339;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	121477229	121477328	.	+	.	Name=Total_amino_acids;B73v2_pos=9:116262432;1allele=G/A;version=Hapmap1;RS=rs131119348;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	121484107	121484206	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:116269310;1allele=/TG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121496286	121496382	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:116281101;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121577431	121577530	.	+	.	Name=Ear_row_number;B73v2_pos=9:116356495;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121577578	121577677	.	+	.	Name=Days_to_silk;B73v2_pos=9:116356348;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121582188	121582287	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:116351738;1allele=C/T;version=Hapmap2;RS=rs278800010;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	121587240	121587339	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116346216;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121681883	121681982	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116467692;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121682232	121682331	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:116467343;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121682301	121682400	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116467274;1allele=G/A;version=Hapmap2;RS=rs817503386;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	121682461	121682560	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116467114;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121682614	121682713	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116466961;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121682728	121682827	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116466847;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121683017	121683116	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116466558;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121684629	121684728	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116464946;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	121730040	121730139	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:116442366;1allele=C/G;version=Hapmap2;RS=rs726819670;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	121809556	121809655	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:116641009;1allele=G/A;version=Hapmap2;RS=rs850172440;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	121809556	121809655	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:116641009;1allele=G/A;version=Hapmap2;RS=rs850172440;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	121817791	121817890	.	+	.	Name=Tassel_length;B73v2_pos=9:116649244;1allele=A/G;version=Hapmap2;RS=rs810640924;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	121911529	121911628	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:116744633;1allele=T/G;version=Hapmap2;RS=rs818762120;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	121916902	121917001	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:116750006;1allele=T/G;version=Hapmap2;RS=rs725391507;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	121985611	121985710	.	+	.	Name=Ear_height;B73v2_pos=9:116818479;1allele=T/G;version=Hapmap2;RS=rs278800303;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	122014711	122014810	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:116847167;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	122056326	122056425	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:116865386;1allele=G/A;version=Hapmap2;RS=rs824496269;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	122063196	122063295	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:116896428;1allele=C/G;version=Hapmap2;RS=rs132533064;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	122063916	122064015	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:116897148;1allele=C/A;version=Hapmap1;RS=rs132533087;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	122065437	122065536	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:116898669;1allele=G/A;version=Hapmap1;RS=rs132533111;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	122076986	122077085	.	+	.	Name=Tassel_length;B73v2_pos=9:116910219;1allele=A/G;version=Hapmap2;RS=rs827759632;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	122105942	122106041	.	+	.	Name=Tassel_length;B73v2_pos=9:116935263;1allele=T/C;version=Hapmap2;RS=rs811958703;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	122127918	122128017	.	+	.	Name=Plant_height;B73v2_pos=9:116957242;1allele=A/T;version=Hapmap2;RS=rs822763539;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	122128324	122128423	.	+	.	Name=Tassel_length;B73v2_pos=9:116957648;1allele=A/T;version=Hapmap2;RS=rs132533179;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	122193000	122193099	.	+	.	Name=Days_to_silk;B73v2_pos=9:117021117;1allele=A/G;version=Hapmap2;RS=rs131120228;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	122195868	122195967	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:117023985;1allele=C/G;version=Hapmap2;RS=rs836457535;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	122198829	122198928	.	+	.	Name=Leaf_width;B73v2_pos=9:117026946;1allele=C/T;version=Hapmap2;RS=rs132533267;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	122198961	122199060	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:117027078;1allele=G/A;version=Hapmap2;RS=rs132533269;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	122198961	122199060	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:117027078;1allele=G/A;version=Hapmap1;RS=rs132533269;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	122216615	122216714	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:117044733;1allele=T/C;version=Hapmap2;RS=rs809409228;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	122216615	122216714	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:117044733;1allele=T/C;version=Hapmap2;RS=rs809409228;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	122217768	122217867	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:117045886;1allele=T/-;version=Hapmap1;RS=rs132533436;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	122219096	122219195	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:117047214;1allele=C/T;version=Hapmap2;RS=rs132533457;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	122219096	122219195	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:117047214;1allele=C/T;version=Hapmap2;RS=rs132533457;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	122683472	122683571	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:117206561;1allele=A/T;version=Hapmap2;RS=rs1064077796;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	122782732	122782831	.	+	.	Name=Ear_height;B73v2_pos=9:117305871;1allele=A/G;version=Hapmap2;RS=rs828032022;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	122787534	122787633	.	+	.	Name=Ear_height;B73v2_pos=9:117310674;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	123207020	123207119	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:117723738;1allele=G/A;version=Hapmap2;RS=rs725990706;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	123694061	123694160	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:118180148;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	123697731	123697830	.	+	.	Name=Tassel_length;B73v2_pos=9:118176478;1allele=A/G;version=Hapmap2;RS=rs726462578;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	123739714	123739813	.	+	.	Name=Protein;B73v2_pos=9:118265632;1allele=T/C;version=Hapmap2;RS=rs278802472;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	123741239	123741338	.	+	.	Name=Protein;B73v2_pos=9:118267160;1allele=G/A;version=Hapmap2;RS=rs132534090;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	123749599	123749698	.	+	.	Name=Leaf_width;B73v2_pos=9:118275520;1allele=T/C;version=Hapmap2;RS=rs834940112;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	123803951	123804050	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:118324340;1allele=G/T;version=Hapmap2;RS=rs846391354;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	123803951	123804050	.	+	.	Name=Height_above_ear;B73v2_pos=9:118324340;1allele=G/T;version=Hapmap2;RS=rs846391354;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	123861766	123861865	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:118396204;1allele=C/G;version=Hapmap2;RS=rs131122598;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	123865019	123865118	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:118399457;1allele=G/A;version=Hapmap2;RS=rs278802802;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	123928548	123928647	.	+	.	Name=Tassel_length;B73v2_pos=9:118463262;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	123998072	123998171	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:118534078;1allele=G/C;version=Hapmap2;RS=rs849712066;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	124002727	124002826	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:118538733;1allele=C/T;version=Hapmap1;RS=rs132534260;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	124213161	124213260	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:118755440;1allele=C/G;version=Hapmap1;RS=rs132534383;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	124218002	124218101	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:118760278;1allele=C/T;version=Hapmap2;RS=rs845033078;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	124305438	124305537	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:118856712;1allele=G/C;version=Hapmap2;RS=rs825868044;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	124366831	124366930	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:118917906;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124366891	124366990	.	+	.	Name=Ear_row_number;B73v2_pos=9:118917966;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124367317	124367416	.	+	.	Name=Ear_row_number;B73v2_pos=9:118918392;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124368882	124368981	.	+	.	Name=Protein;B73v2_pos=9:118919957;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124372769	124372868	.	+	.	Name=Ear_row_number;B73v2_pos=9:118923844;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124372825	124372924	.	+	.	Name=Ear_row_number;B73v2_pos=9:118923900;1allele=A/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124375804	124375903	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:118926861;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124463856	124463955	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:119055984;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124598095	124598194	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:119163126;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124598095	124598194	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:119163126;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124601587	124601686	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:119159633;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124747727	124747826	.	+	.	Name=Tassel_length;B73v2_pos=9:119285421;1allele=G/A;version=Hapmap2;RS=rs278804102;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	124814356	124814455	.	+	.	Name=Tassel_length;B73v2_pos=9:119323871;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	124898989	124899088	.	+	.	Name=Tassel_length;B73v2_pos=9:119443132;1allele=T/A;version=Hapmap2;RS=rs820540760;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	125154823	125154922	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:119733604;1allele=T/C;version=Hapmap2;RS=rs812590575;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	125192201	125192300	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:119769735;1allele=C/T;version=Hapmap2;RS=rs725196879;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	125203528	125203627	.	+	.	Name=Plant_height;B73v2_pos=9:119781062;1allele=T/C;version=Hapmap2;RS=rs848663177;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	125238624	125238723	.	+	.	Name=Height_above_ear;B73v2_pos=9:119816455;1allele=A/C;version=Hapmap2;RS=rs847291640;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	125251823	125251922	.	+	.	Name=Height_above_ear;B73v2_pos=9:119838886;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125293839	125293938	.	+	.	Name=Ear_row_number;B73v2_pos=9:119871458;1allele=G/A;version=Hapmap2;RS=rs278804677;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	125313003	125313102	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:119890846;1allele=A/T;version=Hapmap2;RS=rs805785237;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	125373003	125373102	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:119949938;1allele=A/T;version=Hapmap2;RS=rs131124584;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	125391943	125392042	.	+	.	Name=Height_above_ear;B73v2_pos=9:119968877;1allele=A/G;version=Hapmap2;RS=rs819205480;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	125392086	125392185	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:119969020;1allele=G/C;version=Hapmap1;RS=rs131180001;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	125395130	125395229	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:119972064;1allele=A/G;version=Hapmap2;RS=rs836199232;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	125491338	125491437	.	+	.	Name=Tassel_length;B73v2_pos=9:120101874;1allele=C/T;version=Hapmap2;RS=rs810162103;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	125515868	125515967	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:120074472;1allele=G/A;version=Hapmap2;RS=rs1064453316;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	125517296	125517395	.	+	.	Name=Plant_height;B73v2_pos=9:120075900;1allele=C/A;version=Hapmap2;RS=rs278804921;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	125517381	125517480	.	+	.	Name=Plant_height;B73v2_pos=9:120075985;1allele=C/T;version=Hapmap2;RS=rs1063127131;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	125518761	125518860	.	+	.	Name=Plant_height;B73v2_pos=9:120077365;1allele=/TACT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125518761	125518860	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:120077365;1allele=/TACT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125520480	125520579	.	+	.	Name=Plant_height;B73v2_pos=9:120079084;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125520480	125520579	.	+	.	Name=Ear_height;B73v2_pos=9:120079084;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125520486	125520585	.	+	.	Name=Plant_height;B73v2_pos=9:120079090;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125520486	125520585	.	+	.	Name=Ear_height;B73v2_pos=9:120079090;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125520596	125520695	.	+	.	Name=Ear_height;B73v2_pos=9:120079200;1allele=C/T;version=Hapmap2;RS=rs131124697;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	125520596	125520695	.	+	.	Name=Plant_height;B73v2_pos=9:120079200;1allele=C/T;version=Hapmap2;RS=rs131124697;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	125520622	125520721	.	+	.	Name=Ear_height;B73v2_pos=9:120079226;1allele=A/T;version=Hapmap2;RS=rs131124698;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	125520622	125520721	.	+	.	Name=Plant_height;B73v2_pos=9:120079226;1allele=A/T;version=Hapmap2;RS=rs131124698;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	125523552	125523651	.	+	.	Name=Cob_diameter;B73v2_pos=9:120082156;1allele=A/C;version=Hapmap2;RS=rs844555750;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	125575568	125575667	.	+	.	Name=Ear_height;B73v2_pos=9:120156251;1allele=C/T;version=Hapmap2;RS=rs1063139957;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	125575582	125575681	.	+	.	Name=Cob_diameter;B73v2_pos=9:120156265;1allele=C/T;version=Hapmap2;RS=rs844545819;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	125575900	125575999	.	+	.	Name=Ear_height;B73v2_pos=9:120156583;1allele=A/C;version=Hapmap1;RS=rs869436931;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	125578779	125578878	.	+	.	Name=Tassel_length;B73v2_pos=9:120159462;1allele=T/A;version=Hapmap2;RS=rs278805025;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	125668598	125668697	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:120229992;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125670956	125671055	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:120227634;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	125783930	125784029	.	+	.	Name=Leaf_width;B73v2_pos=9:120355496;1allele=T/C;version=Hapmap1;RS=rs132535302;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	125809197	125809296	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:120381441;1allele=C/G;version=Hapmap2;RS=rs830992782;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	125849074	125849173	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:120421319;1allele=C/A;version=Hapmap2;RS=rs848366531;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	126124847	126124946	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:120695491;1allele=G/A;version=Hapmap1;RS=rs132535516;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	126124872	126124971	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:120695516;1allele=G/A;version=Hapmap1;RS=rs132535518;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	126162329	126162428	.	+	.	Name=Ear_height;B73v2_pos=9:120732998;1allele=C/T;version=Hapmap2;RS=rs832441213;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	126176606	126176705	.	+	.	Name=Ear_height;B73v2_pos=9:120747812;1allele=G/A;version=Hapmap2;RS=rs132535621;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	126177589	126177688	.	+	.	Name=Plant_height;B73v2_pos=9:120748795;1allele=C/A;version=Hapmap2;RS=rs132535657;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	126177594	126177693	.	+	.	Name=Plant_height;B73v2_pos=9:120748800;1allele=G/C;version=Hapmap1;RS=rs132535659;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	126198460	126198559	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=7:164095035;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	126218208	126218307	.	+	.	Name=Stalk_strength;B73v2_pos=9:120790309;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	127169471	127169570	.	+	.	Name=Plant_height;B73v2_pos=9:121586299;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	127169506	127169605	.	+	.	Name=Plant_height;B73v2_pos=9:121586334;1allele=T/C;version=Hapmap2;RS=rs131125223;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	127307871	127307970	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:121723402;1allele=G/A;version=Hapmap2;RS=rs819847577;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	127429804	127429903	.	+	.	Name=Height_above_ear;B73v2_pos=9:121836826;1allele=T/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	127810403	127810502	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:122221962;1allele=C/T;version=Hapmap2;RS=rs726928132;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	127812306	127812405	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:122223865;1allele=C/T;version=Hapmap2;RS=rs132536165;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	127904721	127904820	.	+	.	Name=Height_above_ear;B73v2_pos=9:122264636;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	127920048	127920147	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:122316515;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	127924312	127924411	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:122312251;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	127976737	127976836	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:122380414;1allele=C/T;version=Hapmap2;RS=rs835176993;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	128090746	128090845	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:122497343;1allele=C/T;version=Hapmap2;RS=rs818136892;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	128110005	128110104	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:122516598;1allele=T/C;version=Hapmap2;RS=rs817540979;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	128191792	128191891	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:122597204;1allele=C/G;version=Hapmap2;RS=rs824239663;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	128191792	128191891	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:122597204;1allele=C/G;version=Hapmap2;RS=rs824239663;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	128228718	128228817	.	+	.	Name=Height_above_ear;B73v2_pos=6:146965638;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128423707	128423806	.	+	.	Name=Protein;B73v2_pos=9:122821452;1allele=T/A;version=Hapmap2;RS=rs1061827911;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	128441448	128441547	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:122839192;1allele=G/A;version=Hapmap2;RS=rs828869815;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	128443500	128443599	.	+	.	Name=Height_above_ear;B73v2_pos=9:122841244;1allele=C/T;version=Hapmap2;RS=rs814061438;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	128445524	128445623	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:122843268;1allele=C/T;version=Hapmap2;RS=rs1063594814;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	128464398	128464497	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:122862231;1allele=A/G;version=Hapmap2;RS=rs131126230;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	128523902	128524001	.	+	.	Name=Height_above_ear;B73v2_pos=9:122920584;1allele=G/T;version=Hapmap2;RS=rs835056337;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	128525597	128525696	.	+	.	Name=Cob_diameter;B73v2_pos=9:122922279;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128562398	128562497	.	+	.	Name=Ear_height;B73v2_pos=9:122958940;1allele=G/A;version=Hapmap2;RS=rs724183338;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	128574230	128574329	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:122970781;1allele=A/T;version=Hapmap2;RS=rs836184401;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	128574756	128574855	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:122971307;1allele=G/A;version=Hapmap2;RS=rs824559598;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	128679910	128680009	.	+	.	Name=Tassel_length;B73v2_pos=9:123104378;1allele=C/T;version=Hapmap2;RS=rs842756553;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	128723534	128723633	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:123070410;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128731136	128731235	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:123062807;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128731136	128731235	.	+	.	Name=Days_to_silk;B73v2_pos=9:123062807;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128791144	128791243	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:123001961;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128791298	128791397	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:123001807;1allele=/CCA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128804325	128804424	.	+	.	Name=Cob_diameter;B73v2_pos=9:123121619;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	128896069	128896168	.	+	.	Name=Cob_diameter;B73v2_pos=9:123205729;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	129120153	129120252	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:123434183;1allele=C/G;version=Hapmap1;RS=rs132537113;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	129294550	129294649	.	+	.	Name=Tassel_length;B73v2_pos=9:123592228;1allele=C/T;version=Hapmap2;RS=rs131126904;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	129304025	129304124	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:123601703;1allele=G/C;version=Hapmap2;RS=rs131126913;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	129324558	129324657	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:123621635;1allele=A/G;version=Hapmap2;RS=rs812364623;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	129326746	129326845	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:123623823;1allele=T/C;version=Hapmap2;RS=rs278808021;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	129364629	129364728	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=5:162619155;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	129427832	129427931	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:123734001;1allele=G/A;version=Hapmap2;RS=rs1062925981;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	129437664	129437763	.	+	.	Name=Nodes_per_plant;B73v2_pos=4:41204151;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	129480069	129480168	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:123776287;1allele=T/G;version=Hapmap2;RS=rs725680279;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	129486726	129486825	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:123782944;1allele=A/G;version=Hapmap2;RS=rs849805737;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	129567711	129567810	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:123834564;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	129791888	129791987	.	+	.	Name=Tassel_length;B73v2_pos=9:124092602;1allele=C/T;version=Hapmap2;RS=rs823179949;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	129815929	129816028	.	+	.	Name=Tassel_length;B73v2_pos=9:124110311;1allele=G/A;version=Hapmap2;RS=rs842421467;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	129818043	129818142	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:124112425;1allele=C/T;version=Hapmap2;RS=rs812286999;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	129937232	129937331	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124230973;1allele=C/T;version=Hapmap2;RS=rs131127694;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	129943759	129943858	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:124237500;1allele=C/G;version=Hapmap2;RS=rs810025611;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	130060897	130060996	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124344839;1allele=T/C;version=Hapmap2;RS=rs846279187;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	130076176	130076275	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124360117;1allele=C/T;version=Hapmap1;RS=rs131128108;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	130077262	130077361	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:124361203;1allele=C/T;version=Hapmap2;RS=rs131128114;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	130170029	130170128	.	+	.	Name=Days_to_silk;B73v2_pos=9:124455103;1allele=C/T;version=Hapmap2;RS=rs810833118;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	130226409	130226508	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124535510;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130226409	130226508	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:124535510;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130226409	130226508	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:124535510;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130261598	130261697	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124500315;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130274384	130274483	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124584649;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130275088	130275187	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124584264;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130276095	130276194	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:124583257;1allele=C/A;version=Hapmap2;RS=rs843042688;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	130357359	130357458	.	+	.	Name=Tassel_length;B73v2_pos=9:124641355;1allele=G/C;version=Hapmap2;RS=rs809354384;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	130404323	130404422	.	+	.	Name=Total_amino_acids;B73v2_pos=9:124684938;1allele=G/T;version=Hapmap2;RS=rs848263825;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	130490744	130490843	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:124769047;1allele=A/C;version=Hapmap2;RS=rs849049322;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	130509841	130509940	.	+	.	Name=Tassel_length;B73v2_pos=9:124785918;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130640357	130640456	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:124917587;1allele=C/G;version=Hapmap2;RS=rs838439104;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	130669048	130669147	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:124947162;1allele=T/G;version=Hapmap2;RS=rs132538042;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	130669053	130669152	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:124947167;1allele=A/G;version=Hapmap1;RS=rs132538044;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	130682664	130682763	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:124960780;1allele=A/G;version=Hapmap2;RS=rs131129091;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	130683262	130683361	.	+	.	Name=Protein;B73v2_pos=9:124961378;1allele=C/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130683974	130684073	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:124962090;1allele=G/A;version=Hapmap2;RS=rs131129101;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	130754267	130754366	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:125042853;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	130755866	130755965	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:138868721;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131179090	131179189	.	+	.	Name=Tassel_length;B73v2_pos=9:125444307;1allele=C/A;version=Hapmap2;RS=rs837781486;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	131179118	131179217	.	+	.	Name=Tassel_length;B73v2_pos=9:125444335;1allele=C/T;version=Hapmap2;RS=rs823872574;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	131180001	131180100	.	+	.	Name=Cob_diameter;B73v2_pos=9:125445218;1allele=A/G;version=Hapmap2;RS=rs827330258;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	131210151	131210250	.	+	.	Name=Tassel_length;B73v2_pos=9:125510363;1allele=T/C;version=Hapmap2;RS=rs812573183;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	131218354	131218453	.	+	.	Name=Leaf_width;B73v2_pos=9:125518566;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131218567	131218666	.	+	.	Name=Leaf_width;B73v2_pos=9:125518779;1allele=T/C;version=Hapmap2;RS=rs131129785;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	131254629	131254728	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:125537473;1allele=T/G;version=Hapmap2;RS=rs832990265;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	131254690	131254789	.	+	.	Name=Leaf_width;B73v2_pos=9:125537534;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131278596	131278695	.	+	.	Name=Leaf_width;B73v2_pos=9:125561456;1allele=A/G;version=Hapmap2;RS=rs131129903;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	131403770	131403869	.	+	.	Name=Leaf_width;B73v2_pos=9:125690993;1allele=G/A;version=Hapmap2;RS=rs131130009;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	131444775	131444874	.	+	.	Name=Leaf_width;B73v2_pos=9:125724276;1allele=A/C;version=Hapmap2;RS=rs131130095;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	131446594	131446693	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:125726095;1allele=A/G;version=Hapmap2;RS=rs847776387;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	131446604	131446703	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:125726105;1allele=T/C;version=Hapmap2;RS=rs833685808;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	131446860	131446959	.	+	.	Name=Leaf_width;B73v2_pos=9:125726361;1allele=T/C;version=Hapmap2;RS=rs821667396;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	131447048	131447147	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:125726549;1allele=T/C;version=Hapmap2;RS=rs847451394;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	131447398	131447497	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:125726899;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131447446	131447545	.	+	.	Name=Leaf_width;B73v2_pos=9:125726947;1allele=C/T;version=Hapmap1;RS=rs132538549;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	131449585	131449684	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:125729086;1allele=G/T;version=Hapmap2;RS=rs131130114;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	131450805	131450904	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:125730306;1allele=A/G;version=Hapmap2;RS=rs810420280;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	131450989	131451088	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:125730490;1allele=G/T;version=Hapmap2;RS=rs824488813;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	131450989	131451088	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:125730490;1allele=G/T;version=Hapmap2;RS=rs824488813;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	131488532	131488631	.	+	.	Name=Leaf_width;B73v2_pos=9:125783425;1allele=C/A;version=Hapmap2;RS=rs806849588;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	131489746	131489845	.	+	.	Name=Leaf_width;B73v2_pos=9:125784639;1allele=C/T;version=Hapmap2;RS=rs819151083;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	131489816	131489915	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:125784709;1allele=T/C;version=Hapmap2;RS=rs842069261;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	131490671	131490770	.	+	.	Name=Leaf_width;B73v2_pos=9:125785564;1allele=C/T;version=Hapmap2;RS=rs823458280;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	131510551	131510650	.	+	.	Name=Leaf_width;B73v2_pos=9:125805642;1allele=C/T;version=Hapmap2;RS=rs131130241;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	131511622	131511721	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:125806713;1allele=A/G;version=Hapmap2;RS=rs131130252;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	131511810	131511909	.	+	.	Name=Leaf_width;B73v2_pos=9:125806901;1allele=A/G;version=Hapmap2;RS=rs131130256;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	131569924	131570023	.	+	.	Name=Leaf_width;B73v2_pos=9:125864723;1allele=G/C;version=Hapmap2;RS=rs808805409;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	131570784	131570883	.	+	.	Name=Leaf_width;B73v2_pos=9:125865583;1allele=A/G;version=Hapmap2;RS=rs824974513;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	131605294	131605393	.	+	.	Name=Cob_diameter;B73v2_pos=9:125903085;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131616899	131616998	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:125914693;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131741303	131741402	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=8:167541348;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131848300	131848398	.	+	.	Name=Tassel_length;B73v2_pos=9:126150161;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	131879643	131879742	.	+	.	Name=Leaf_width;B73v2_pos=9:126244883;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	132023919	132024018	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:126334987;1allele=G/A;version=Hapmap1;RS=rs131130765;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	132137243	132137342	.	+	.	Name=Tassel_length;B73v2_pos=9:126449045;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	132455928	132456027	.	+	.	Name=Days_to_silk;B73v2_pos=9:126725441;1allele=A/T;version=Hapmap2;RS=rs847374139;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	132497598	132497697	.	+	.	Name=Tassel_length;B73v2_pos=9:126760573;1allele=T/A;version=Hapmap2;RS=rs811260594;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	132641157	132641256	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:126886170;1allele=G/A;version=Hapmap2;RS=rs811300785;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	132787819	132787918	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=1:97555936;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	133063827	133063926	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:127284948;1allele=A/G;version=Hapmap2;RS=rs831422707;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133068737	133068836	.	+	.	Name=Days_to_silk;B73v2_pos=9:127289858;1allele=A/G;version=Hapmap2;RS=rs834169887;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	133118621	133118720	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:127339625;1allele=G/A;version=Hapmap2;RS=rs803276145;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	133134600	133134699	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127355605;1allele=C/T;version=Hapmap2;RS=rs849894867;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133135259	133135358	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:127356264;1allele=G/A;version=Hapmap2;RS=rs1061215441;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133135301	133135400	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:127356306;1allele=G/A;version=Hapmap2;RS=rs1061649973;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133138200	133138299	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:127359206;1allele=C/T;version=Hapmap2;RS=rs725371138;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133138740	133138839	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:127359746;1allele=G/A;version=Hapmap2;RS=rs1063431364;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133156643	133156742	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:127377653;1allele=C/T;version=Hapmap2;RS=rs808002960;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133337274	133337373	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:127524188;1allele=C/T;version=Hapmap2;RS=rs131132154;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133345645	133345744	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:127532560;1allele=T/G;version=Hapmap2;RS=rs841571110;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	133348720	133348819	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:127535635;1allele=G/A;version=Hapmap2;RS=rs845408871;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	133351137	133351236	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:127538052;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	133352559	133352658	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:127539473;1allele=T/C;version=Hapmap2;RS=rs1063479217;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133374633	133374732	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:127561551;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	133378535	133378634	.	+	.	Name=Tassel_length;B73v2_pos=9:127565459;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	133498987	133499086	.	+	.	Name=Leaf_width;B73v2_pos=9:127681872;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	133502374	133502473	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127685259;1allele=T/C;version=Hapmap2;RS=rs131132386;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133502734	133502833	.	+	.	Name=Ear_height;B73v2_pos=9:127685619;1allele=C/T;version=Hapmap2;RS=rs131132387;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133502734	133502833	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:127685619;1allele=C/T;version=Hapmap2;RS=rs131132387;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133502734	133502833	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127685619;1allele=C/T;version=Hapmap2;RS=rs131132387;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133503553	133503652	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:127686438;1allele=-/T;version=Hapmap1;RS=rs813476512;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	133503553	133503652	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:127686438;1allele=-/T;version=Hapmap1;RS=rs813476512;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	133503553	133503652	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127686438;1allele=-/T;version=Hapmap1;RS=rs813476512;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	133505097	133505196	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127687982;1allele=G/A;version=Hapmap2;RS=rs131132421;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133505165	133505264	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127688050;1allele=A/G;version=Hapmap2;RS=rs278811528;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	133507029	133507128	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127689914;1allele=G/T;version=Hapmap2;RS=rs132540067;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	133507322	133507421	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:127690207;1allele=A/G;version=Hapmap1;RS=rs132540068;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133507322	133507421	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127690207;1allele=A/G;version=Hapmap1;RS=rs132540068;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133507414	133507513	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127690299;1allele=C/T;version=Hapmap2;RS=rs849952892;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133507414	133507513	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:127690299;1allele=C/T;version=Hapmap2;RS=rs849952892;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133507414	133507513	.	+	.	Name=Days_to_silk;B73v2_pos=9:127690299;1allele=C/T;version=Hapmap2;RS=rs849952892;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133507495	133507594	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:127690380;1allele=C/T;version=Hapmap1;RS=rs132540072;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133507495	133507594	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127690380;1allele=C/T;version=Hapmap1;RS=rs132540072;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133507826	133507925	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127690711;1allele=G/A;version=Hapmap2;RS=rs132540078;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	133508205	133508304	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127691090;1allele=T/C;version=Hapmap2;RS=rs837398313;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133508263	133508362	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127691148;1allele=C/T;version=Hapmap2;RS=rs822163377;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133508263	133508362	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:127691148;1allele=C/T;version=Hapmap2;RS=rs822163377;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133508954	133509053	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:127691839;1allele=C/T;version=Hapmap2;RS=rs278811539;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133509296	133509395	.	+	.	Name=Ear_height;B73v2_pos=9:127692181;1allele=T/A;version=Hapmap2;RS=rs131132437;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	133509391	133509490	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:127692276;1allele=T/C;version=Hapmap2;RS=rs278811543;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133509391	133509490	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:127692276;1allele=T/C;version=Hapmap2;RS=rs278811543;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133509391	133509490	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:127692276;1allele=T/C;version=Hapmap2;RS=rs278811543;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133509785	133509884	.	+	.	Name=Ear_height;B73v2_pos=9:127692670;1allele=C/T;version=Hapmap2;RS=rs824804910;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	133511146	133511245	.	+	.	Name=Leaf_length;B73v2_pos=9:127694031;1allele=T/C;version=Hapmap2;RS=rs278811551;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133514187	133514286	.	+	.	Name=Leaf_length;B73v2_pos=9:127697072;1allele=G/A;version=Hapmap1;RS=rs132540118;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	133631326	133631425	.	+	.	Name=Ear_height;B73v2_pos=9:127814218;1allele=G/A;version=Hapmap2;RS=rs803027853;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	133631714	133631813	.	+	.	Name=Ear_height;B73v2_pos=9:127814606;1allele=C/T;version=Hapmap2;RS=rs805449027;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	133631990	133632089	.	+	.	Name=Ear_height;B73v2_pos=9:127814882;1allele=G/A;version=Hapmap2;RS=rs806134847;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	133639113	133639212	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:127822004;1allele=T/G;version=Hapmap2;RS=rs131132733;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	133668527	133668626	.	+	.	Name=Cob_diameter;B73v2_pos=9:127851932;1allele=A/C;version=Hapmap2;RS=rs132540158;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	133684480	133684579	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:127867885;1allele=A/T;version=Hapmap2;RS=rs131132853;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	133909674	133909773	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:128089084;1allele=G/A;version=Hapmap2;RS=rs131133117;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	133919886	133919985	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:128099295;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	133919886	133919985	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:128099295;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	133959394	133959493	.	+	.	Name=Leaf_width;B73v2_pos=9:128138812;1allele=C/T;version=Hapmap2;RS=rs842693572;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134129866	134129965	.	+	.	Name=Tassel_length;B73v2_pos=9:128317246;1allele=+/-;version=Hapmap2;RS=rs829574705;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134180540	134180639	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:128367533;1allele=C/A;version=Hapmap2;RS=rs839647528;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	134229501	134229600	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128417867;1allele=T/C;version=Hapmap2;RS=rs820170935;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	134232094	134232193	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128420460;1allele=C/A;version=Hapmap2;RS=rs811352254;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	134232753	134232852	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128421119;1allele=A/G;version=Hapmap2;RS=rs847751902;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	134242828	134242927	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:128431194;1allele=G/A;version=Hapmap2;RS=rs825434798;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	134268939	134269038	.	+	.	Name=Nitrate;B73v2_pos=9:128456135;1allele=A/G;version=Hapmap2;RS=rs818253974;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	134275829	134275928	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:128463025;1allele=G/C;version=Hapmap2;RS=rs835857169;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	134277183	134277282	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:128464379;1allele=G/A;version=Hapmap2;RS=rs724288424;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	134281572	134281671	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128468768;1allele=C/A;version=Hapmap2;RS=rs847054677;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	134285187	134285286	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:128472383;1allele=G/A;version=Hapmap2;RS=rs836635241;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	134435784	134435883	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:128617501;1allele=G/A;version=Hapmap2;RS=rs819848786;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	134465600	134465699	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:128647319;1allele=A/C;version=Hapmap2;RS=rs826531887;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	134466395	134466494	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:128648114;1allele=T/C;version=Hapmap2;RS=rs278812690;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134467386	134467485	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:128649106;1allele=A/G;version=Hapmap2;RS=rs831171358;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	134478949	134479048	.	+	.	Name=Tassel_length;B73v2_pos=9:128660669;1allele=T/C;version=Hapmap1;RS=rs813837789;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	134485684	134485783	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:128667404;1allele=A/G;version=Hapmap2;RS=rs809793158;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	134485684	134485783	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:128667404;1allele=A/G;version=Hapmap2;RS=rs809793158;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	134485757	134485856	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:128667477;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	134486542	134486641	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:128668262;1allele=C/T;version=Hapmap2;RS=rs278812802;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134532353	134532452	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:128714109;1allele=C/T;version=Hapmap2;RS=rs835744558;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134533086	134533185	.	+	.	Name=Tassel_length;B73v2_pos=9:128714842;1allele=A/C;version=Hapmap1;RS=rs131134453;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	134538201	134538300	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:128719957;1allele=G/A;version=Hapmap1;RS=rs131134442;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134544830	134544929	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:128726586;1allele=C/T;version=Hapmap2;RS=rs826783973;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134546392	134546491	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:128728148;1allele=T/G;version=Hapmap2;RS=rs826884283;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	134555520	134555619	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128737276;1allele=C/T;version=Hapmap2;RS=rs821735901;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	134559874	134559973	.	+	.	Name=Days_to_silk;B73v2_pos=9:128741633;1allele=A/C;version=Hapmap2;RS=rs278812853;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	134559874	134559973	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:128741633;1allele=A/C;version=Hapmap2;RS=rs278812853;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	134578355	134578454	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128760819;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	134598763	134598862	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128781227;1allele=C/T;version=Hapmap2;RS=rs1064407149;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	134605301	134605400	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128787765;1allele=G/C;version=Hapmap2;RS=rs839487298;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	134661803	134661902	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:128847160;1allele=A/G;version=Hapmap2;RS=rs726358887;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	134781464	134781563	.	+	.	Name=Tassel_length;B73v2_pos=9:128967122;1allele=G/C;version=Hapmap2;RS=rs726439886;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	135003787	135003886	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:129187006;1allele=T/C;version=Hapmap2;RS=rs726972702;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	135071022	135071121	.	+	.	Name=Days_to_silk;B73v2_pos=9:129273144;1allele=A/G;version=Hapmap2;RS=rs1062160394;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	135071144	135071243	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:129273266;1allele=C/T;version=Hapmap2;RS=rs808996850;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	135071290	135071389	.	+	.	Name=Days_to_silk;B73v2_pos=9:129273412;1allele=A/T;version=Hapmap2;RS=rs827711174;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	135257801	135257900	.	+	.	Name=Leaf_width;B73v2_pos=9:129455635;1allele=T/C;version=Hapmap2;RS=rs725598851;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	135257801	135257900	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:129455635;1allele=T/C;version=Hapmap2;RS=rs725598851;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	135274343	135274439	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:129472179;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	135315586	135315685	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:129513420;1allele=C/T;version=Hapmap2;RS=rs845288101;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	135562707	135562806	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:129766060;1allele=T/G;version=Hapmap2;RS=rs278813534;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	135566871	135566970	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:129770156;1allele=T/C;version=Hapmap2;RS=rs834901509;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	135690333	135690432	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:129895917;1allele=G/A;version=Hapmap2;RS=rs131135757;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	135999374	135999473	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:130196730;1allele=A/G;version=Hapmap2;RS=rs131136013;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	136025846	136025945	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130261262;1allele=T/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136027871	136027970	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130259236;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136027914	136028013	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130259193;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136033642	136033741	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130253459;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136047576	136047675	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130239523;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136047616	136047715	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:130239483;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136047616	136047715	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130239483;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136065620	136065719	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:130221058;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136317501	136317600	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130511349;1allele=T/G;version=Hapmap2;RS=rs823858007;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	136319639	136319738	.	+	.	Name=Ear_height;B73v2_pos=9:130513487;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136582242	136582341	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:130780390;1allele=A/G;version=Hapmap2;RS=rs831007635;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	136624554	136624653	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:130822582;1allele=C/T;version=Hapmap2;RS=rs278814402;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	136671345	136671444	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:130856670;1allele=A/G;version=Hapmap2;RS=rs1063878254;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	136685474	136685573	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:130873521;1allele=G/C;version=Hapmap2;RS=rs844482481;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	136692016	136692115	.	+	.	Name=Days_to_silk;B73v2_pos=9:130880063;1allele=A/T;version=Hapmap2;RS=rs814647563;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	136699930	136700029	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:130887977;1allele=A/G;version=Hapmap2;RS=rs837810726;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	136748815	136748914	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:130927173;1allele=G/A;version=Hapmap2;RS=rs725643760;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	136762589	136762688	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=5:93116529;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136762589	136762688	.	+	.	Name=Starch;B73v2_pos=5:93116529;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	136848751	136848850	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:131027356;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	137007074	137007173	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:131172155;1allele=C/T;version=Hapmap2;RS=rs832617200;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	137041627	137041726	.	+	.	Name=Tassel_length;B73v2_pos=9:131218685;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	137160844	137160943	.	+	.	Name=Ear_row_number;B73v2_pos=8:20985977;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	137313976	137314075	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:131296444;1allele=C/T;version=Hapmap2;RS=rs849596728;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	137503224	137503323	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:131520433;1allele=C/G;version=Hapmap2;RS=rs837187080;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	137506545	137506644	.	+	.	Name=Tassel_length;B73v2_pos=9:131523754;1allele=G/A;version=Hapmap2;RS=rs132542723;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	137510858	137510957	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:131528067;1allele=T/G;version=Hapmap2;RS=rs806285753;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	137556711	137556810	.	+	.	Name=Tassel_length;B73v2_pos=9:131572903;1allele=G/C;version=Hapmap2;RS=rs843178462;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	137559428	137559527	.	+	.	Name=Tassel_length;B73v2_pos=9:131575620;1allele=G/C;version=Hapmap2;RS=rs810478203;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	137559748	137559847	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:131575940;1allele=C/G;version=Hapmap2;RS=rs824367232;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	137562472	137562571	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:131578664;1allele=T/C;version=Hapmap2;RS=rs131138581;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	137563015	137563114	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:131579207;1allele=A/G;version=Hapmap2;RS=rs132542835;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	137824966	137825065	.	+	.	Name=Days_to_silk;B73v2_pos=9:131877429;1allele=A/G;version=Hapmap2;RS=rs811673494;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	137825023	137825122	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:131877486;1allele=T/A;version=Hapmap2;RS=rs848239217;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	137907814	137907913	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:131917282;1allele=A/T;version=Hapmap2;RS=rs131139126;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	137977901	137978000	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:132007876;1allele=-/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	138006677	138006776	.	+	.	Name=Leaf_width;B73v2_pos=9:132036654;1allele=C/A;version=Hapmap1;RS=rs131139236;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	138013145	138013244	.	+	.	Name=Leaf_width;B73v2_pos=9:132043122;1allele=T/G;version=Hapmap2;RS=rs132543121;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	138014750	138014849	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:132044727;1allele=C/G;version=Hapmap2;RS=rs836461030;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	138015472	138015571	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:132045449;1allele=G/A;version=Hapmap2;RS=rs278815521;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	138082026	138082125	.	+	.	Name=Leaf_width;B73v2_pos=9:132133887;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	138307380	138307479	.	+	.	Name=Days_to_silk;B73v2_pos=9:132342492;1allele=T/C;version=Hapmap2;RS=rs278815663;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	138367376	138367475	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:132401822;1allele=A/G;version=Hapmap2;RS=rs821848539;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	138369773	138369872	.	+	.	Name=Leaf_width;B73v2_pos=9:132404219;1allele=G/A;version=Hapmap2;RS=rs809638583;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	138694143	138694242	.	+	.	Name=Tassel_length;B73v2_pos=9:132757162;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	138694170	138694269	.	+	.	Name=Leaf_width;B73v2_pos=9:132757135;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	138901929	138902028	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:132962244;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	139050113	139050212	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:133105536;1allele=A/T;version=Hapmap2;RS=rs814120030;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	139213855	139213954	.	+	.	Name=Total_amino_acids;B73v2_pos=3:214848736;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	139353680	139353779	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:133410641;1allele=A/G;version=Hapmap2;RS=rs837149873;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	139524291	139524390	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:133581825;1allele=T/C;version=Hapmap2;RS=rs848506451;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	139530189	139530288	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:133587723;1allele=C/T;version=Hapmap2;RS=rs847371881;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	139632654	139632753	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:133689938;1allele=A/T;version=Hapmap1;RS=rs849190372;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	139634922	139635021	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:133692206;1allele=/AT;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	139701601	139701700	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:133759784;1allele=C/G;version=Hapmap1;RS=rs132544474;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	139728072	139728171	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:133786257;1allele=/CGGC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	139732593	139732692	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:133790776;1allele=C/T;version=Hapmap1;RS=rs132544523;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	139735683	139735782	.	+	.	Name=Leaf_width;B73v2_pos=9:133793866;1allele=G/C;version=Hapmap2;RS=rs132544607;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	139765691	139765790	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:133847008;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	139898088	139898187	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:133898375;1allele=G/C;version=Hapmap2;RS=rs131141577;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	139905427	139905526	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:133905714;1allele=A/C;version=Hapmap2;RS=rs810918994;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	139913793	139913892	.	+	.	Name=Days_to_silk;B73v2_pos=9:133914082;1allele=G/A;version=Hapmap2;RS=rs131141644;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	139914460	139914559	.	+	.	Name=Leaf_width;B73v2_pos=9:133914749;1allele=T/C;version=Hapmap2;RS=rs278816691;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	139937186	139937285	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:133937475;1allele=A/T;version=Hapmap2;RS=rs806651055;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	139937737	139937836	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:133938026;1allele=A/G;version=Hapmap2;RS=rs131141702;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	139938502	139938601	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:133938791;1allele=A/T;version=Hapmap2;RS=rs810566327;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	139939994	139940093	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:133940283;1allele=C/A;version=Hapmap2;RS=rs807884277;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	139943570	139943669	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:133943856;1allele=C/T;version=Hapmap2;RS=rs806145467;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	140024192	140024291	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:134037244;1allele=A/G;version=Hapmap2;RS=rs132544925;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	140030957	140031056	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:134044009;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	140070890	140070989	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:134081849;1allele=C/A;version=Hapmap2;RS=rs131141821;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	140070890	140070989	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:134081849;1allele=C/A;version=Hapmap2;RS=rs131141821;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	140079018	140079117	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:134089976;1allele=T/A;version=Hapmap2;RS=rs810381606;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	140101522	140101621	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:134112488;1allele=G/A;version=Hapmap2;RS=rs828447656;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	140272054	140272153	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:134288186;1allele=C/G;version=Hapmap2;RS=rs840574534;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	140276346	140276445	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:134292478;1allele=+/-;version=Hapmap2;RS=rs811760966;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	140279536	140279635	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:134295666;1allele=C/T;version=Hapmap2;RS=rs834894042;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	140281990	140282089	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:134298120;1allele=G/T;version=Hapmap2;RS=rs131142043;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	140345469	140345568	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:134362346;1allele=A/G;version=Hapmap1;RS=rs132545274;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	140345469	140345568	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:134362346;1allele=A/G;version=Hapmap1;RS=rs132545274;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	140361018	140361117	.	+	.	Name=Days_to_silk;B73v2_pos=9:134377528;1allele=A/G;version=Hapmap2;RS=rs278817065;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	140546266	140546365	.	+	.	Name=Days_to_silk;B73v2_pos=9:134558284;1allele=C/T;version=Hapmap1;RS=rs132545348;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	140546919	140547018	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:134558937;1allele=G/A;version=Hapmap2;RS=rs131142564;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	140548450	140548549	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:134560467;1allele=C/G;version=Hapmap1;RS=rs131142570;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	140548653	140548752	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:134560670;1allele=C/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	140560040	140560139	.	+	.	Name=Ear_height;B73v2_pos=9:134572158;1allele=A/C;version=Hapmap2;RS=rs131142637;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	140560040	140560139	.	+	.	Name=Plant_height;B73v2_pos=9:134572158;1allele=A/C;version=Hapmap2;RS=rs131142637;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	140586163	140586262	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:134593469;1allele=A/G;version=Hapmap2;RS=rs842116750;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	140600922	140601021	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:134608439;1allele=-/+;version=Hapmap2;RS=rs845802487;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	140605074	140605173	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:134612591;1allele=G/T;version=Hapmap1;RS=rs132545533;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	140607799	140607898	.	+	.	Name=Cob_diameter;B73v2_pos=9:134615316;1allele=T/C;version=Hapmap2;RS=rs131142731;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	140608114	140608213	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:134615631;1allele=G/C;version=Hapmap1;RS=rs131142735;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	140608732	140608831	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:134616249;1allele=T/C;version=Hapmap1;RS=rs132545559;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	140609481	140609580	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:134616998;1allele=A/G;version=Hapmap2;RS=rs131142743;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	140611303	140611402	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:134618820;1allele=G/C;version=Hapmap2;RS=rs724905203;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	140716511	140716610	.	+	.	Name=Ear_height;B73v2_pos=9:134721586;1allele=G/A;version=Hapmap2;RS=rs132545652;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	140923855	140923954	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:134896340;1allele=C/T;version=Hapmap2;RS=rs1064601628;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	140946813	140946912	.	+	.	Name=Tassel_length;B73v2_pos=9:134915116;1allele=G/A;version=Hapmap2;RS=rs131143323;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	140947987	140948086	.	+	.	Name=Tassel_length;B73v2_pos=9:134916290;1allele=A/T;version=Hapmap2;RS=rs278817518;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	141028341	141028440	.	+	.	Name=Tassel_length;B73v2_pos=9:134998317;1allele=G/A;version=Hapmap1;RS=rs132545816;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	141031462	141031561	.	+	.	Name=Tassel_length;B73v2_pos=9:135001438;1allele=C/T;version=Hapmap2;RS=rs131143435;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	141082599	141082698	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:135049711;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141147572	141147671	.	+	.	Name=Starch;B73v2_pos=9:135100463;1allele=G/A;version=Hapmap2;RS=rs848598849;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	141156874	141156973	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:135109765;1allele=C/T;version=Hapmap2;RS=rs1061910227;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141196442	141196541	.	+	.	Name=Ear_height;B73v2_pos=9:135148631;1allele=A/G;version=Hapmap2;RS=rs840214964;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	141203806	141203905	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:135155995;1allele=A/T;version=Hapmap2;RS=rs824890520;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	141252828	141252927	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:135164899;1allele=T/C;version=Hapmap2;RS=rs819652416;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141252979	141253078	.	+	.	Name=Ear_height;B73v2_pos=9:135165050;1allele=C/T;version=Hapmap2;RS=rs850090008;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	141357328	141357427	.	+	.	Name=Cob_diameter;B73v2_pos=9:135301285;1allele=C/T;version=Hapmap2;RS=rs131144085;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	141361390	141361489	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:135305348;1allele=G/T;version=Hapmap2;RS=rs131144145;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	141361580	141361679	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:135305538;1allele=T/C;version=Hapmap2;RS=rs1062299072;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141366015	141366114	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:135309972;1allele=G/A;version=Hapmap2;RS=rs131144197;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	141366015	141366114	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:135309972;1allele=G/A;version=Hapmap2;RS=rs131144197;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	141366968	141367067	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:135310925;1allele=G/T;version=Hapmap2;RS=rs278817997;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	141367165	141367264	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:135311122;1allele=A/T;version=Hapmap2;RS=rs804933354;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	141367479	141367578	.	+	.	Name=Ear_height;B73v2_pos=9:135311436;1allele=G/A;version=Hapmap2;RS=rs825410594;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	141403527	141403626	.	+	.	Name=Starch;B73v2_pos=9:135347452;1allele=C/T;version=Hapmap2;RS=rs816160437;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	141408000	141408099	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:135351925;1allele=T/A;version=Hapmap2;RS=rs830340203;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	141434202	141434301	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:135378133;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141450800	141450899	.	+	.	Name=Leaf_length;B73v2_pos=9:135394800;1allele=G/A;version=Hapmap2;RS=rs834795996;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	141464711	141464810	.	+	.	Name=Ear_height;B73v2_pos=9:135408711;1allele=C/T;version=Hapmap1;RS=rs132546053;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	141464806	141464905	.	+	.	Name=Leaf_length;B73v2_pos=9:135408806;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141465643	141465742	.	+	.	Name=Leaf_length;B73v2_pos=9:135409643;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141466162	141466261	.	+	.	Name=Leaf_length;B73v2_pos=9:135410162;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141490379	141490478	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:135434714;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141516294	141516393	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:135459666;1allele=T/C;version=Hapmap2;RS=rs801644647;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141525031	141525130	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:135468402;1allele=C/T;version=Hapmap1;RS=rs132546098;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	141530874	141530973	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:135474245;1allele=T/G;version=Hapmap2;RS=rs815493191;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	141696915	141697014	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:135628074;1allele=A/G;version=Hapmap2;RS=rs846567197;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	141798417	141798516	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:135730183;1allele=T/C;version=Hapmap2;RS=rs839357420;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141878218	141878317	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:135810009;1allele=A/G;version=Hapmap2;RS=rs812794890;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	141880212	141880311	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:135812003;1allele=C/A;version=Hapmap2;RS=rs825566317;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	141881288	141881387	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:135813079;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141881333	141881432	.	+	.	Name=Cob_diameter;B73v2_pos=9:135813124;1allele=C/A;version=Hapmap2;RS=rs844583552;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	141881380	141881479	.	+	.	Name=Cob_diameter;B73v2_pos=9:135813171;1allele=T/C;version=Hapmap2;RS=rs821351785;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141881863	141881962	.	+	.	Name=Leaf_length;B73v2_pos=9:135813654;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141883216	141883315	.	+	.	Name=Leaf_length;B73v2_pos=9:135815007;1allele=T/C;version=Hapmap2;RS=rs278818555;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	141883242	141883341	.	+	.	Name=Leaf_length;B73v2_pos=9:135815033;1allele=A/G;version=Hapmap2;RS=rs132546247;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	141886321	141886420	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:135818112;1allele=/AG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141886424	141886523	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:135818215;1allele=C/G;version=Hapmap2;RS=rs808764324;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	141902359	141902458	.	+	.	Name=Leaf_length;B73v2_pos=9:135834841;1allele=C/G;version=Hapmap1;RS=rs132546286;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	141902359	141902458	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:135834841;1allele=C/G;version=Hapmap1;RS=rs132546286;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	141902681	141902780	.	+	.	Name=Leaf_length;B73v2_pos=9:135835163;1allele=A/G;version=Hapmap1;RS=rs132546292;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	141903191	141903290	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:135835673;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	141903584	141903683	.	+	.	Name=Leaf_length;B73v2_pos=9:135836066;1allele=G/C;version=Hapmap2;RS=rs132546316;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	141904025	141904124	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:135836507;1allele=A/G;version=Hapmap2;RS=rs842947828;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	141905215	141905314	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:135837697;1allele=C/T;version=Hapmap2;RS=rs1061995709;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141922655	141922754	.	+	.	Name=Leaf_length;B73v2_pos=9:135854561;1allele=C/T;version=Hapmap2;RS=rs808785311;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	141923101	141923200	.	+	.	Name=Ear_height;B73v2_pos=9:135855007;1allele=A/T;version=Hapmap1;RS=rs132546352;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	141923101	141923200	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:135855007;1allele=A/T;version=Hapmap1;RS=rs132546352;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	141923539	141923638	.	+	.	Name=Ear_height;B73v2_pos=9:135855445;1allele=G/A;version=Hapmap1;RS=rs131145285;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	141924793	141924892	.	+	.	Name=Leaf_length;B73v2_pos=9:135856699;1allele=C/T;version=Hapmap1;RS=rs132546370;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	141926374	141926473	.	+	.	Name=Leaf_length;B73v2_pos=9:135858280;1allele=A/G;version=Hapmap2;RS=rs278818603;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	141932923	141933022	.	+	.	Name=Days_to_silk;B73v2_pos=9:135864829;1allele=G/C;version=Hapmap1;RS=rs131145350;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	141933921	141934020	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:135865828;1allele=A/G;version=Hapmap2;RS=rs830012387;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	141934080	141934179	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:135865987;1allele=G/C;version=Hapmap1;RS=rs132546452;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	141934080	141934179	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:135865987;1allele=G/C;version=Hapmap2;RS=rs132546452;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	141953417	141953516	.	+	.	Name=Days_to_silk;B73v2_pos=9:135885327;1allele=G/T;version=Hapmap2;RS=rs278818642;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	141954366	141954465	.	+	.	Name=Days_to_silk;B73v2_pos=9:135886276;1allele=C/G;version=Hapmap2;RS=rs840310114;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	141954900	141954999	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:135886810;1allele=T/G;version=Hapmap2;RS=rs830097270;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	142020219	142020318	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:135970736;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142021687	142021786	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:135969268;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142021968	142022067	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:135968987;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142054330	142054429	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:136024737;1allele=G/C;version=Hapmap2;RS=rs131145533;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	142068519	142068618	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:136038931;1allele=C/T;version=Hapmap2;RS=rs840207868;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	142073716	142073815	.	+	.	Name=Ear_height;B73v2_pos=9:136042078;1allele=A/G;version=Hapmap2;RS=rs801702077;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	142162574	142162673	.	+	.	Name=Leaf_length;B73v2_pos=9:136078582;1allele=G/A;version=Hapmap2;RS=rs131145683;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	142164096	142164195	.	+	.	Name=Leaf_length;B73v2_pos=9:136080104;1allele=C/T;version=Hapmap2;RS=rs1062075299;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142164139	142164238	.	+	.	Name=Leaf_length;B73v2_pos=9:136080147;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142166419	142166518	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:136082427;1allele=C/T;version=Hapmap2;RS=rs816250672;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	142171843	142171942	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:136087851;1allele=G/A;version=Hapmap2;RS=rs830739329;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	142228210	142228309	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136144410;1allele=T/C;version=Hapmap2;RS=rs833774230;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142228210	142228309	.	+	.	Name=Plant_height;B73v2_pos=9:136144410;1allele=T/C;version=Hapmap2;RS=rs833774230;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142228264	142228363	.	+	.	Name=Plant_height;B73v2_pos=9:136144464;1allele=A/G;version=Hapmap2;RS=rs830455621;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	142228901	142229000	.	+	.	Name=Cob_diameter;B73v2_pos=9:136145101;1allele=G/A;version=Hapmap2;RS=rs131145842;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	142229018	142229117	.	+	.	Name=Plant_height;B73v2_pos=9:136145218;1allele=G/A;version=Hapmap2;RS=rs847918272;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	142269738	142269837	.	+	.	Name=Plant_height;B73v2_pos=9:136178247;1allele=T/C;version=Hapmap2;RS=rs131145878;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142269738	142269837	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136178247;1allele=T/C;version=Hapmap2;RS=rs131145878;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142324725	142324824	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:136233240;1allele=T/C;version=Hapmap2;RS=rs832927278;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142342479	142342578	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136250370;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142382990	142383089	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:136300167;1allele=G/A;version=Hapmap2;RS=rs847036567;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	142383247	142383346	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:136300424;1allele=T/A;version=Hapmap2;RS=rs131146000;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	142384316	142384415	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:136301493;1allele=G/C;version=Hapmap1;RS=rs131146008;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	142384723	142384822	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:136301900;1allele=T/C;version=Hapmap1;RS=rs131146011;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142405018	142405117	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:122629995;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142472638	142472737	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:136390670;1allele=A/C;version=Hapmap2;RS=rs836377486;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	142473092	142473191	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:136391124;1allele=C/T;version=Hapmap2;RS=rs278819070;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142473298	142473397	.	+	.	Name=Plant_height;B73v2_pos=9:136391330;1allele=G/C;version=Hapmap2;RS=rs131146044;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	142473373	142473472	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:136391405;1allele=A/G;version=Hapmap2;RS=rs131146046;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	142592970	142593069	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:136508114;1allele=G/A;version=Hapmap2;RS=rs724220094;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	142594347	142594446	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:136509491;1allele=T/C;version=Hapmap2;RS=rs802333411;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142633662	142633761	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:136548808;1allele=A/C;version=Hapmap2;RS=rs820178849;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	142638184	142638283	.	+	.	Name=Cob_diameter;B73v2_pos=9:136553330;1allele=A/T;version=Hapmap2;RS=rs809226405;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	142642779	142642878	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:136557925;1allele=G/C;version=Hapmap2;RS=rs131146265;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	142643774	142643873	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:136558920;1allele=T/C;version=Hapmap1;RS=rs132547267;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142644705	142644804	.	+	.	Name=Cob_diameter;B73v2_pos=9:136559851;1allele=T/C;version=Hapmap2;RS=rs131146276;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142674521	142674620	.	+	.	Name=Days_to_silk;B73v2_pos=9:136589671;1allele=G/C;version=Hapmap2;RS=rs132547361;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	142808303	142808402	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:136699220;1allele=C/A;version=Hapmap2;RS=rs845903637;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	142818920	142819019	.	+	.	Name=Total_amino_acids;B73v2_pos=9:136710675;1allele=T/C;version=Hapmap2;RS=rs844978192;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142873907	142874006	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:136783217;1allele=T/C;version=Hapmap2;RS=rs828170721;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142875079	142875178	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136784389;1allele=C/T;version=Hapmap2;RS=rs278819469;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	142898665	142898764	.	+	.	Name=Plant_height;B73v2_pos=9:136806205;1allele=C/T;version=Hapmap2;RS=rs815829012;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	142898737	142898836	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136806277;1allele=C/T;version=Hapmap2;RS=rs829233547;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	142899892	142899991	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136807432;1allele=A/G;version=Hapmap2;RS=rs1064476199;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	142917495	142917594	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136829967;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142940009	142940108	.	+	.	Name=Leaf_length;B73v2_pos=9:136845785;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	142949945	142950044	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:136856154;1allele=T/A;version=Hapmap2;RS=rs837693194;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	142962963	142963062	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:136869174;1allele=C/T;version=Hapmap2;RS=rs131147026;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	142998679	142998778	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:136904886;1allele=C/A;version=Hapmap1;RS=rs132547782;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	143152426	143152525	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:137065269;1allele=T/G;version=Hapmap2;RS=rs845076410;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	143154538	143154637	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:137067381;1allele=T/A;version=Hapmap1;RS=rs278819792;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	143154930	143155029	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:137067773;1allele=G/A;version=Hapmap2;RS=rs826494734;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	143155082	143155181	.	+	.	Name=Plant_height;B73v2_pos=9:137067925;1allele=C/T;version=Hapmap2;RS=rs840624115;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	143155908	143156007	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:137068751;1allele=A/T;version=Hapmap2;RS=rs818289800;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	143155908	143156007	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:137068751;1allele=A/T;version=Hapmap2;RS=rs818289800;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	143155908	143156007	.	+	.	Name=Plant_height;B73v2_pos=9:137068751;1allele=A/T;version=Hapmap2;RS=rs818289800;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	143176860	143176959	.	+	.	Name=Ear_height;B73v2_pos=9:137089656;1allele=T/A;version=Hapmap2;RS=rs131147510;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	143176860	143176959	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:137089656;1allele=T/A;version=Hapmap2;RS=rs131147510;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	143235814	143235913	.	+	.	Name=Ear_row_number;B73v2_pos=9:137154929;1allele=G/T;version=Hapmap2;RS=rs847749928;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	143243977	143244076	.	+	.	Name=Ear_height;B73v2_pos=9:137163092;1allele=A/G;version=Hapmap2;RS=rs131147613;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	143812374	143812473	.	+	.	Name=Protein;B73v2_pos=9:137783887;1allele=TGC/;version=Hapmap1;RS=rs849473567;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	143819598	143819697	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:137766219;1allele=A/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	143819679	143819778	.	+	.	Name=Protein;B73v2_pos=9:137766138;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	143820591	143820690	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:137765226;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	143847918	143848017	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:137737108;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	143937106	143937205	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:137849023;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	144127990	144128089	.	+	.	Name=Ear_height;B73v2_pos=9:138041899;1allele=C/T;version=Hapmap2;RS=rs278820520;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144211336	144211435	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138133078;1allele=T/C;version=Hapmap2;RS=rs835394074;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	144302385	144302484	.	+	.	Name=Plant_height;B73v2_pos=9:138223221;1allele=A/G;version=Hapmap2;RS=rs131149200;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	144302894	144302993	.	+	.	Name=Plant_height;B73v2_pos=9:138223730;1allele=T/C;version=Hapmap2;RS=rs131149189;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144315980	144316079	.	+	.	Name=Cob_diameter;B73v2_pos=9:138236816;1allele=C/A;version=Hapmap2;RS=rs837825998;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	144319332	144319431	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:138240168;1allele=T/-;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	144319435	144319534	.	+	.	Name=Plant_height;B73v2_pos=9:138240271;1allele=G/A;version=Hapmap2;RS=rs849152990;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	144323398	144323497	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:138244231;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	144325283	144325382	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:138246116;1allele=C/T;version=Hapmap2;RS=rs278820692;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144325283	144325382	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=9:138246116;1allele=C/T;version=Hapmap2;RS=rs278820692;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144400875	144400974	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:138316657;1allele=G/A;version=Hapmap2;RS=rs811560604;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	144404144	144404243	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138319926;1allele=T/C;version=Hapmap2;RS=rs132549637;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	144422179	144422278	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138337965;1allele=C/T;version=Hapmap2;RS=rs1062130167;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144447584	144447683	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138363175;1allele=A/C;version=Hapmap2;RS=rs832276746;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	144517272	144517371	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138434209;1allele=A/C;version=Hapmap1;RS=rs132549827;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	144570768	144570867	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138488765;1allele=C/A;version=Hapmap2;RS=rs832342232;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	144585151	144585250	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138503151;1allele=T/C;version=Hapmap2;RS=rs726536666;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	144586043	144586142	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:138504043;1allele=C/T;version=Hapmap2;RS=rs726097753;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144633257	144633356	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138558417;1allele=C/A;version=Hapmap2;RS=rs836544094;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	144635193	144635292	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:138560353;1allele=C/T;version=Hapmap2;RS=rs813328466;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144661995	144662094	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:138587897;1allele=/AG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	144680730	144680829	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138607795;1allele=A/T;version=Hapmap2;RS=rs804995807;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	144762458	144762557	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:138689413;1allele=G/A;version=Hapmap2;RS=rs132550077;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	144839370	144839469	.	+	.	Name=Cob_diameter;B73v2_pos=9:138760813;1allele=A/G;version=Hapmap2;RS=rs131149809;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	144839388	144839487	.	+	.	Name=Cob_diameter;B73v2_pos=9:138760831;1allele=A/G;version=Hapmap2;RS=rs131149810;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	144839408	144839507	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138760851;1allele=G/T;version=Hapmap2;RS=rs843641328;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	144841625	144841724	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138763068;1allele=T/C;version=Hapmap2;RS=rs835582056;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	144841875	144841974	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:138763318;1allele=A/G;version=Hapmap2;RS=rs278821013;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	144847737	144847836	.	+	.	Name=Leaf_length;B73v2_pos=9:138769186;1allele=C/G;version=Hapmap2;RS=rs819838053;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	144848916	144849015	.	+	.	Name=Plant_height;B73v2_pos=9:138770365;1allele=T/C;version=Hapmap2;RS=rs278821038;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	144849389	144849488	.	+	.	Name=Plant_height;B73v2_pos=9:138770838;1allele=T/A;version=Hapmap2;RS=rs131149865;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	144856367	144856466	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:138777816;1allele=G/A;version=Hapmap2;RS=rs815321038;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	144887300	144887399	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:138801272;1allele=A/G;version=Hapmap1;RS=rs132550427;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	144888902	144889001	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:138802874;1allele=C/G;version=Hapmap2;RS=rs835798451;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	144963938	144964037	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138881971;1allele=G/C;version=Hapmap2;RS=rs803344475;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	144978509	144978608	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138896541;1allele=A/G;version=Hapmap1;RS=rs132550533;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	144990360	144990459	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:138908395;1allele=T/G;version=Hapmap2;RS=rs818595175;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	145020465	145020564	.	+	.	Name=Height_above_ear;B73v2_pos=9:138938506;1allele=C/T;version=Hapmap2;RS=rs811893334;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	145256764	145256863	.	+	.	Name=Cob_diameter;B73v2_pos=9:139171243;1allele=A/G;version=Hapmap2;RS=rs815532950;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	145277912	145278011	.	+	.	Name=Cob_diameter;B73v2_pos=9:139192986;1allele=G/A;version=Hapmap2;RS=rs132550742;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	145298767	145298866	.	+	.	Name=Cob_diameter;B73v2_pos=9:139213300;1allele=A/T;version=Hapmap2;RS=rs131150356;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	145300129	145300228	.	+	.	Name=Height_above_ear;B73v2_pos=9:139214662;1allele=C/A;version=Hapmap2;RS=rs839100960;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	145468089	145468188	.	+	.	Name=Cob_diameter;B73v2_pos=9:139383093;1allele=T/G;version=Hapmap2;RS=rs131150792;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	145469471	145469570	.	+	.	Name=Height_above_ear;B73v2_pos=9:139384475;1allele=T/G;version=Hapmap2;RS=rs805949098;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	145490233	145490332	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:139405505;1allele=G/T;version=Hapmap2;RS=rs803682200;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	145591447	145591546	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:139511531;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	145592117	145592216	.	+	.	Name=Plant_height;B73v2_pos=9:139512201;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	145598839	145598938	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:139518923;1allele=G/A;version=Hapmap2;RS=rs131151023;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	145599222	145599321	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:139519306;1allele=G/A;version=Hapmap2;RS=rs131151020;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	145622891	145622990	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:139549738;1allele=C/T;version=Hapmap2;RS=rs724878924;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	145622891	145622990	.	+	.	Name=Starch;B73v2_pos=9:139549738;1allele=C/T;version=Hapmap2;RS=rs724878924;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	145624901	145625000	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:139547728;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	145664243	145664342	.	+	.	Name=Cob_diameter;B73v2_pos=9:139589107;1allele=G/A;version=Hapmap2;RS=rs131151185;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	145770475	145770574	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:139695350;1allele=C/A;version=Hapmap2;RS=rs132551242;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	145850826	145850925	.	+	.	Name=Total_amino_acids;B73v2_pos=9:139761358;1allele=C/G;version=Hapmap2;RS=rs849252863;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	145857370	145857469	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:139821007;1allele=T/A;version=Hapmap2;RS=rs810485795;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	145959645	145959744	.	+	.	Name=Ear_row_number;B73v2_pos=9:139844297;1allele=G/A;version=Hapmap2;RS=rs836298509;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	145959811	145959910	.	+	.	Name=Ear_row_number;B73v2_pos=9:139844463;1allele=T/C;version=Hapmap2;RS=rs132551650;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	145974322	145974421	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:139853917;1allele=G/T;version=Hapmap2;RS=rs808841773;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	146050424	146050523	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:139930502;1allele=T/C;version=Hapmap2;RS=rs131152029;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	146052987	146053086	.	+	.	Name=Cob_diameter;B73v2_pos=9:139933065;1allele=G/A;version=Hapmap2;RS=rs844489100;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	146093064	146093163	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:139985177;1allele=G/C;version=Hapmap2;RS=rs847028185;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	146123362	146123461	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:140015479;1allele=G/C;version=Hapmap2;RS=rs132552231;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	146133510	146133609	.	+	.	Name=Cob_diameter;B73v2_pos=9:140025629;1allele=G/A;version=Hapmap2;RS=rs813578657;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	146338459	146338558	.	+	.	Name=Cob_diameter;B73v2_pos=9:140219324;1allele=T/C;version=Hapmap2;RS=rs725704964;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	146341530	146341629	.	+	.	Name=Cob_diameter;B73v2_pos=9:140222395;1allele=C/T;version=Hapmap2;RS=rs727216807;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	146461493	146461592	.	+	.	Name=Plant_height;B73v2_pos=9:140342027;1allele=T/C;version=Hapmap1;RS=rs724260880;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	146461761	146461860	.	+	.	Name=Plant_height;B73v2_pos=9:140342295;1allele=A/C;version=Hapmap2;RS=rs131152468;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	146464669	146464768	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:140345203;1allele=T/C;version=Hapmap2;RS=rs131152496;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	146466979	146467078	.	+	.	Name=Cob_diameter;B73v2_pos=9:140347513;1allele=G/C;version=Hapmap1;RS=rs132552503;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	146469547	146469646	.	+	.	Name=Cob_diameter;B73v2_pos=9:140350081;1allele=/TTCCC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	146473587	146473686	.	+	.	Name=Cob_diameter;B73v2_pos=9:140354121;1allele=G/T;version=Hapmap1;RS=rs132552662;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	146479988	146480087	.	+	.	Name=Cob_diameter;B73v2_pos=9:140360578;1allele=C/T;version=Hapmap2;RS=rs726877490;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	146545055	146545154	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=1:23128195;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	146647105	146647204	.	+	.	Name=Cob_diameter;B73v2_pos=9:140522331;1allele=T/A;version=Hapmap2;RS=rs278823108;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	146720528	146720627	.	+	.	Name=Cob_diameter;B73v2_pos=9:140591170;1allele=A/G;version=Hapmap2;RS=rs816817167;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	146957191	146957290	.	+	.	Name=Leaf_length;B73v2_pos=9:140821028;1allele=A/G;version=Hapmap2;RS=rs836268804;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	146976558	146976657	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:140841511;1allele=C/T;version=Hapmap2;RS=rs132552981;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	147313376	147313475	.	+	.	Name=Ear_height;B73v2_pos=9:141173945;1allele=G/A;version=Hapmap2;RS=rs131153639;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	147314101	147314200	.	+	.	Name=Plant_height;B73v2_pos=9:141174670;1allele=A/G;version=Hapmap2;RS=rs131153647;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	147314101	147314200	.	+	.	Name=Ear_height;B73v2_pos=9:141174670;1allele=A/G;version=Hapmap2;RS=rs131153647;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	147314235	147314334	.	+	.	Name=Ear_height;B73v2_pos=9:141174804;1allele=G/A;version=Hapmap1;RS=rs132553169;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	147314684	147314783	.	+	.	Name=Ear_height;B73v2_pos=9:141175253;1allele=G/C;version=Hapmap1;RS=rs132553174;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	147317450	147317549	.	+	.	Name=Ear_height;B73v2_pos=9:141178019;1allele=G/T;version=Hapmap2;RS=rs1062397853;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	147317738	147317837	.	+	.	Name=Ear_height;B73v2_pos=9:141178307;1allele=A/T;version=Hapmap2;RS=rs1063697365;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	147425509	147425608	.	+	.	Name=Ear_height;B73v2_pos=9:141327803;1allele=C/A;version=Hapmap2;RS=rs131153744;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	147430869	147430968	.	+	.	Name=Ear_height;B73v2_pos=9:141333163;1allele=C/T;version=Hapmap2;RS=rs278824293;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	147973050	147973149	.	+	.	Name=Cob_diameter;B73v2_pos=9:141833642;1allele=G/C;version=Hapmap2;RS=rs278825241;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	147973053	147973152	.	+	.	Name=Cob_diameter;B73v2_pos=9:141833645;1allele=C/T;version=Hapmap2;RS=rs278825242;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	147973194	147973293	.	+	.	Name=Cob_diameter;B73v2_pos=9:141833786;1allele=T/C;version=Hapmap2;RS=rs828919210;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	148051644	148051743	.	+	.	Name=Starch;B73v2_pos=1:51388966;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	148071007	148071106	.	+	.	Name=Cob_diameter;B73v2_pos=9:141930211;1allele=cnv;version=CNV_genic;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	148150749	148150848	.	+	.	Name=Cob_diameter;B73v2_pos=9:142088594;1allele=A/G;version=Hapmap2;RS=rs831012605;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	148343032	148343131	.	+	.	Name=Cob_diameter;B73v2_pos=9:142211376;1allele=T/A;version=Hapmap2;RS=rs131155290;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	148354197	148354296	.	+	.	Name=Leaf_length;B73v2_pos=9:142222541;1allele=A/G;version=Hapmap2;RS=rs846818758;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	148470138	148470237	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:142351279;1allele=C/T;version=Hapmap2;RS=rs726212506;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	148539845	148539944	.	+	.	Name=Leaf_length;B73v2_pos=9:142471009;1allele=C/T;version=Hapmap1;RS=rs132554916;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	148653245	148653344	.	+	.	Name=Photoperiod_Growing-degree_days_to_silk;B73v2_pos=1:92410171;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	148771221	148771320	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:142644451;1allele=A/C;version=Hapmap2;RS=rs837980705;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	148957882	148957981	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:142824647;1allele=A/G;version=Hapmap1;RS=rs132555485;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	149081833	149081932	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:142936348;1allele=A/G;version=Hapmap2;RS=rs131156205;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	149084522	149084621	.	+	.	Name=Leaf_width;B73v2_pos=9:142939038;1allele=C/T;version=Hapmap2;RS=rs824932483;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149084599	149084698	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:142939115;1allele=G/C;version=Hapmap2;RS=rs808520185;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	149093372	149093471	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:142947892;1allele=A/G;version=Hapmap2;RS=rs849046960;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	149093395	149093494	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:142947915;1allele=A/G;version=Hapmap2;RS=rs801965168;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	149093586	149093685	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:142948106;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	149093771	149093870	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:142948291;1allele=C/T;version=Hapmap2;RS=rs831224943;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149093772	149093871	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:142948292;1allele=A/T;version=Hapmap2;RS=rs813422910;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	149094640	149094739	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:142949160;1allele=G/A;version=Hapmap1;RS=rs132555750;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	149095367	149095466	.	+	.	Name=Leaf_width;B73v2_pos=9:142949887;1allele=C/T;version=Hapmap2;RS=rs132555767;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149147494	149147593	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:143001569;1allele=T/C;version=Hapmap2;RS=rs846878944;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	149308980	149309079	.	+	.	Name=Tassel_length;B73v2_pos=9:143161895;1allele=C/T;version=Hapmap2;RS=rs131156489;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149309122	149309221	.	+	.	Name=Tassel_length;B73v2_pos=9:143162037;1allele=G/A;version=Hapmap1;RS=rs132556085;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	149319557	149319656	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143172472;1allele=G/A;version=Hapmap2;RS=rs132556115;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	149334975	149335074	.	+	.	Name=Tassel_length;B73v2_pos=9:143187890;1allele=C/G;version=Hapmap2;RS=rs132556266;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	149335193	149335292	.	+	.	Name=Tassel_length;B73v2_pos=9:143188108;1allele=A/G;version=Hapmap2;RS=rs132556273;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	149335220	149335319	.	+	.	Name=Tassel_length;B73v2_pos=9:143188135;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	149336991	149337090	.	+	.	Name=Tassel_length;B73v2_pos=9:143189906;1allele=C/G;version=Hapmap2;RS=rs131156599;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	149337140	149337239	.	+	.	Name=Tassel_length;B73v2_pos=9:143190055;1allele=T/C;version=Hapmap2;RS=rs132556276;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149338638	149338737	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143191553;1allele=T/A;version=Hapmap2;RS=rs278828039;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	149350712	149350811	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143202917;1allele=G/C;version=Hapmap2;RS=rs841119159;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	149352280	149352379	.	+	.	Name=Tassel_length;B73v2_pos=9:143204485;1allele=A/T;version=Hapmap2;RS=rs278828048;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	149353738	149353837	.	+	.	Name=Tassel_length;B73v2_pos=9:143205941;1allele=C/T;version=Hapmap2;RS=rs278828057;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149353738	149353837	.	+	.	Name=Leaf_length;B73v2_pos=9:143205941;1allele=C/T;version=Hapmap2;RS=rs278828057;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149355097	149355196	.	+	.	Name=Tassel_length;B73v2_pos=9:143207298;1allele=G/C;version=Hapmap2;RS=rs131156635;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	149629297	149629396	.	+	.	Name=Height_above_ear;B73v2_pos=5:203366871;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	149715661	149715760	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143538077;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	149723248	149723347	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143580042;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	149728588	149728687	.	+	.	Name=Nodes_above_ear;B73v2_pos=7:18812345;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	149852707	149852806	.	+	.	Name=Days_to_silk;B73v2_pos=9:143688303;1allele=C/T;version=Hapmap2;RS=rs278828617;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	149853712	149853811	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143689309;1allele=C/T;version=Hapmap2;RS=rs131156974;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	150045466	150045565	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143860397;1allele=A/C;version=Hapmap2;RS=rs834203638;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	150045545	150045644	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143860476;1allele=C/G;version=Hapmap2;RS=rs132556597;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150045614	150045713	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143860545;1allele=C/T;version=Hapmap2;RS=rs132556599;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150046521	150046620	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143861448;1allele=C/T;version=Hapmap2;RS=rs132556613;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150047052	150047151	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:143861979;1allele=T/A;version=Hapmap1;RS=rs131157119;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	150048981	150049080	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:143863908;1allele=G/T;version=Hapmap2;RS=rs193631306;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	150067600	150067699	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:143883945;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	150067857	150067956	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:143884202;1allele=A/G;version=Hapmap2;RS=rs278828967;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	150067860	150067959	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:143884205;1allele=A/G;version=Hapmap2;RS=rs849213238;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	150089658	150089757	.	+	.	Name=Tassel_length;B73v2_pos=9:143889461;1allele=C/G;version=Hapmap2;RS=rs132556719;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	150106159	150106258	.	+	.	Name=Tassel_length;B73v2_pos=9:143905963;1allele=T/C;version=Hapmap2;RS=rs1062759462;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150159191	150159290	.	+	.	Name=Days_to_silk;B73v2_pos=9:143953130;1allele=A/G;version=Hapmap1;RS=rs132556891;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	150241113	150241212	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:144034938;1allele=C/A;version=Hapmap2;RS=rs278829253;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	150369292	150369391	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:144157129;1allele=G/T;version=Hapmap2;RS=rs131157512;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	150671430	150671529	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144447788;1allele=G/A;version=Hapmap2;RS=rs840039983;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	150674309	150674408	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144450667;1allele=G/A;version=Hapmap2;RS=rs816130969;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	150715492	150715591	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144495935;1allele=T/C;version=Hapmap2;RS=rs724284382;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	150716053	150716152	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144496496;1allele=A/G;version=Hapmap2;RS=rs807711702;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	150716138	150716237	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144496581;1allele=G/A;version=Hapmap2;RS=rs132557543;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	150741685	150741784	.	+	.	Name=Tassel_length;B73v2_pos=9:144522100;1allele=T/C;version=Hapmap2;RS=rs814521294;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	150749050	150749149	.	+	.	Name=Tassel_length;B73v2_pos=9:144529465;1allele=C/T;version=Hapmap2;RS=rs278829550;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	150749546	150749645	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144529961;1allele=T/C;version=Hapmap2;RS=rs131157812;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150761460	150761559	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:144541788;1allele=T/C;version=Hapmap2;RS=rs841904933;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	150822516	150822615	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:144602843;1allele=C/T;version=Hapmap2;RS=rs832428801;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150822516	150822615	.	+	.	Name=Days_to_silk;B73v2_pos=9:144602843;1allele=C/T;version=Hapmap2;RS=rs832428801;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150851101	150851200	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144638278;1allele=G/A;version=Hapmap1;RS=rs805234176;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	150939062	150939161	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144716501;1allele=A/G;version=Hapmap2;RS=rs803019095;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	150954539	150954638	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:144731978;1allele=G/T;version=Hapmap2;RS=rs1064097472;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	150988963	150989062	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:144766415;1allele=A/T;version=Hapmap2;RS=rs278829834;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	150988977	150989076	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:144766429;1allele=C/T;version=Hapmap2;RS=rs278829835;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	150989024	150989123	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:144766476;1allele=A/G;version=Hapmap2;RS=rs131158129;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	150989038	150989137	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:144766490;1allele=G/T;version=Hapmap2;RS=rs278829836;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	151009734	151009833	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:144787196;1allele=G/A;version=Hapmap2;RS=rs132557995;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	151034424	151034523	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:144811788;1allele=G/C;version=Hapmap2;RS=rs820901558;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	151047989	151048088	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:144825358;1allele=T/C;version=Hapmap2;RS=rs832919436;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	151208334	151208433	.	+	.	Name=Total_amino_acids;B73v2_pos=9:144992150;1allele=T/C;version=Hapmap2;RS=rs847070093;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	151253072	151253171	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145036807;1allele=A/G;version=Hapmap2;RS=rs278830156;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	151257419	151257518	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145041154;1allele=G/T;version=Hapmap2;RS=rs131158401;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	151282709	151282808	.	+	.	Name=Tassel_length;B73v2_pos=9:145066548;1allele=C/G;version=Hapmap2;RS=rs835737217;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	151285288	151285387	.	+	.	Name=Tassel_length;B73v2_pos=9:145069127;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	151411109	151411208	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:145195694;1allele=C/T;version=Hapmap1;RS=rs132558979;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	151483369	151483468	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145268226;1allele=T/A;version=Hapmap2;RS=rs838222176;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	151491264	151491363	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145276122;1allele=C/T;version=Hapmap2;RS=rs819519901;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	151506095	151506194	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145291173;1allele=C/A;version=Hapmap2;RS=rs821426592;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	151550858	151550957	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145335532;1allele=C/T;version=Hapmap2;RS=rs278830419;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	151555430	151555529	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:145340104;1allele=/TCG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	151565792	151565891	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145350466;1allele=C/T;version=Hapmap2;RS=rs821604992;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	151608578	151608677	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:145392505;1allele=T/G;version=Hapmap2;RS=rs818616048;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	151608582	151608681	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:145392509;1allele=A/G;version=Hapmap2;RS=rs1063748115;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	151613342	151613441	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145397271;1allele=T/C;version=Hapmap2;RS=rs802824847;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	151688286	151688384	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145471997;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	151728400	151728499	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:145511325;1allele=A/T;version=Hapmap2;RS=rs131158915;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	151729038	151729137	.	+	.	Name=Starch;B73v2_pos=9:145511963;1allele=C/A;version=Hapmap2;RS=rs837524020;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	151741518	151741617	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145524444;1allele=T/A;version=Hapmap2;RS=rs826328035;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	151802509	151802608	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:145583356;1allele=C/A;version=Hapmap2;RS=rs817475228;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	151863345	151863444	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:145641281;1allele=G/C;version=Hapmap2;RS=rs845953915;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	152063346	152063445	.	+	.	Name=Tassel_length;B73v2_pos=9:145846943;1allele=T/G;version=Hapmap2;RS=rs278831739;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	152104560	152104659	.	+	.	Name=Tassel_length;B73v2_pos=9:145889821;1allele=A/G;version=Hapmap2;RS=rs278831859;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	152104591	152104690	.	+	.	Name=Tassel_length;B73v2_pos=9:145889852;1allele=C/G;version=Hapmap2;RS=rs132559519;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	152104634	152104733	.	+	.	Name=Tassel_length;B73v2_pos=9:145889895;1allele=C/G;version=Hapmap1;RS=rs132559520;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	152288056	152288155	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:146070531;1allele=A/G;version=Hapmap1;RS=rs132559653;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	152290572	152290671	.	+	.	Name=Tassel_length;B73v2_pos=9:146073047;1allele=G/A;version=Hapmap2;RS=rs278832240;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	152297095	152297194	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:146079571;1allele=A/C;version=Hapmap1;RS=rs132559687;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	152298408	152298507	.	+	.	Name=Tassel_length;B73v2_pos=9:146080884;1allele=G/T;version=Hapmap2;RS=rs809144827;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	152300728	152300827	.	+	.	Name=Tassel_length;B73v2_pos=9:146083205;1allele=T/C;version=Hapmap1;RS=rs132559719;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	152306248	152306347	.	+	.	Name=Tassel_length;B73v2_pos=9:146088725;1allele=A/G;version=Hapmap2;RS=rs827618830;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	152306987	152307086	.	+	.	Name=Tassel_length;B73v2_pos=9:146089464;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	152307697	152307796	.	+	.	Name=Tassel_length;B73v2_pos=9:146090174;1allele=G/A;version=Hapmap2;RS=rs1064058947;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	152330791	152330890	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:146113132;1allele=T/A;version=Hapmap2;RS=rs846730007;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	152331037	152331136	.	+	.	Name=Tassel_length;B73v2_pos=9:146113378;1allele=C/G;version=Hapmap2;RS=rs278832383;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	152331315	152331414	.	+	.	Name=Tassel_length;B73v2_pos=9:146113656;1allele=T/A;version=Hapmap2;RS=rs131159443;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	152438398	152438497	.	+	.	Name=Tassel_length;B73v2_pos=9:146206537;1allele=C/T;version=Hapmap1;RS=rs132560035;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	152448972	152449071	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:285118176;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	152626133	152626232	.	+	.	Name=Leaf_width;B73v2_pos=9:146299349;1allele=T/C;version=Hapmap2;RS=rs278832574;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	152649200	152649299	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:146322409;1allele=C/T;version=Hapmap2;RS=rs278832601;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	152721406	152721505	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:146425901;1allele=T/A;version=Hapmap2;RS=rs803233345;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	152729586	152729685	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:146434081;1allele=G/A;version=Hapmap2;RS=rs131159677;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	152918547	152918646	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=1:28719970;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	152964100	152964199	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:146653361;1allele=C/T;version=Hapmap1;RS=rs132560619;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	152999358	152999457	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:146687232;1allele=G/C;version=Hapmap2;RS=rs724491591;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	153006038	153006137	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:146693912;1allele=T/C;version=Hapmap2;RS=rs836962297;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	153006078	153006177	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:146693952;1allele=T/C;version=Hapmap2;RS=rs278833188;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	153061205	153061304	.	+	.	Name=Tassel_length;B73v2_pos=9:146708985;1allele=CG/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	153297648	153297747	.	+	.	Name=Glutamate;B73v2_pos=9:146920043;1allele=C/T;version=Hapmap2;RS=rs131160447;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153345398	153345497	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:146968465;1allele=T/A;version=Hapmap2;RS=rs837920909;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	153345417	153345516	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:146968484;1allele=T/G;version=Hapmap2;RS=rs845027144;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	153347325	153347424	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:146970392;1allele=A/G;version=Hapmap2;RS=rs837402130;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	153348567	153348666	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:146971634;1allele=G/A;version=Hapmap2;RS=rs815488872;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	153380912	153381011	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147002867;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	153382220	153382319	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147004175;1allele=A/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	153477935	153478034	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:147099483;1allele=T/C;version=Hapmap2;RS=rs726299503;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	153639517	153639616	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:147263143;1allele=C/T;version=Hapmap2;RS=rs835898905;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153667250	153667349	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147290877;1allele=G/A;version=Hapmap2;RS=rs837497229;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	153668113	153668212	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147291740;1allele=C/T;version=Hapmap2;RS=rs815686250;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153668113	153668212	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147291740;1allele=C/T;version=Hapmap2;RS=rs815686250;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153674241	153674340	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:147297868;1allele=G/A;version=Hapmap2;RS=rs833301859;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	153710222	153710321	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147332161;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	153713544	153713643	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147335483;1allele=C/T;version=Hapmap2;RS=rs842287228;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153713544	153713643	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:147335483;1allele=C/T;version=Hapmap2;RS=rs842287228;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153713641	153713740	.	+	.	Name=Leaf_width;B73v2_pos=9:147335580;1allele=C/T;version=Hapmap1;RS=rs132561518;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153716092	153716191	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:147338031;1allele=T/C;version=Hapmap2;RS=rs818417791;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	153716349	153716448	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147338288;1allele=G/T;version=Hapmap2;RS=rs131160863;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	153716597	153716696	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:147338536;1allele=A/G;version=Hapmap2;RS=rs131160871;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	153717034	153717133	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:147338973;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	153719029	153719128	.	+	.	Name=Height_above_ear;B73v2_pos=9:147340968;1allele=G/A;version=Hapmap2;RS=rs132561568;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	153727475	153727574	.	+	.	Name=Leaf_width;B73v2_pos=9:147349411;1allele=C/T;version=Hapmap2;RS=rs131160910;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153739958	153740057	.	+	.	Name=Leaf_width;B73v2_pos=9:147361895;1allele=A/G;version=Hapmap2;RS=rs278834475;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	153760725	153760824	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147382659;1allele=G/A;version=Hapmap1;RS=rs132561739;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	153761600	153761699	.	+	.	Name=Glutamate;B73v2_pos=9:147383534;1allele=C/T;version=Hapmap2;RS=rs278834563;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153833986	153834085	.	+	.	Name=Height_above_ear;B73v2_pos=9:147455059;1allele=T/C;version=Hapmap2;RS=rs278834669;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153834840	153834939	.	+	.	Name=Height_above_ear;B73v2_pos=9:147455913;1allele=C/T;version=Hapmap2;RS=rs131161251;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	153841624	153841723	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147462698;1allele=A/T;version=Hapmap2;RS=rs278834739;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	153844479	153844578	.	+	.	Name=Height_above_ear;B73v2_pos=9:147465553;1allele=A/C;version=Hapmap2;RS=rs278834768;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	153844510	153844609	.	+	.	Name=Height_above_ear;B73v2_pos=9:147465584;1allele=G/T;version=Hapmap2;RS=rs278834769;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	153859183	153859282	.	+	.	Name=Height_above_ear;B73v2_pos=9:147480257;1allele=A/G;version=Hapmap2;RS=rs278834903;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	153863197	153863296	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:147484271;1allele=A/T;version=Hapmap2;RS=rs807468832;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	153865372	153865471	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147486446;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	153865764	153865863	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147486838;1allele=T/A;version=Hapmap2;RS=rs132561987;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	153876462	153876561	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147497535;1allele=C/G;version=Hapmap2;RS=rs278835018;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	153882323	153882422	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147503398;1allele=T/C;version=Hapmap2;RS=rs278835067;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153886511	153886610	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147507586;1allele=C/T;version=Hapmap2;RS=rs838656325;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153900210	153900309	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147521287;1allele=A/G;version=Hapmap2;RS=rs725073613;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	153901359	153901458	.	+	.	Name=Leaf_width;B73v2_pos=9:147522436;1allele=C/T;version=Hapmap2;RS=rs278835168;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	153902054	153902153	.	+	.	Name=Leaf_width;B73v2_pos=9:147523131;1allele=A/G;version=Hapmap2;RS=rs278835185;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	153996168	153996267	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147617518;1allele=A/G;version=Hapmap2;RS=rs131161708;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	153996941	153997040	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147618291;1allele=C/T;version=Hapmap2;RS=rs839832261;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153997515	153997614	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147618865;1allele=C/T;version=Hapmap2;RS=rs845956615;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	153998576	153998675	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147619926;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154000549	154000648	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147621899;1allele=C/T;version=Hapmap2;RS=rs817044995;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154001299	154001398	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147622649;1allele=G/A;version=Hapmap1;RS=rs846092744;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154009041	154009140	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147630393;1allele=A/T;version=Hapmap2;RS=rs849742012;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	154018112	154018211	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147639463;1allele=C/G;version=Hapmap2;RS=rs132562434;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	154018114	154018213	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147639465;1allele=G/A;version=Hapmap2;RS=rs845841035;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154029978	154030077	.	+	.	Name=Leaf_width;B73v2_pos=9:147651329;1allele=C/T;version=Hapmap2;RS=rs132562502;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154032210	154032309	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147653561;1allele=A/G;version=Hapmap2;RS=rs821695498;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154040906	154041005	.	+	.	Name=Height_above_ear;B73v2_pos=9:147662257;1allele=A/C;version=Hapmap2;RS=rs132562616;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	154046726	154046825	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147668077;1allele=A/G;version=Hapmap2;RS=rs803857621;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154078820	154078919	.	+	.	Name=Plant_height;B73v2_pos=9:147700220;1allele=A/G;version=Hapmap2;RS=rs726814812;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154086520	154086619	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:147708034;1allele=C/T;version=Hapmap1;RS=rs132562864;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154122507	154122606	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:147744276;1allele=T/C;version=Hapmap2;RS=rs803009159;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154151330	154151429	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:147774398;1allele=C/T;version=Hapmap2;RS=rs805065348;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154167118	154167217	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:147790478;1allele=C/A;version=Hapmap2;RS=rs846629109;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	154169589	154169688	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147797501;1allele=A/C;version=Hapmap1;RS=rs847677581;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	154174638	154174737	.	+	.	Name=Height_above_ear;B73v2_pos=9:147802550;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154176147	154176246	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147804060;1allele=C/G;version=Hapmap2;RS=rs811480557;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	154176658	154176757	.	+	.	Name=Height_above_ear;B73v2_pos=9:147804571;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154177006	154177105	.	+	.	Name=Height_above_ear;B73v2_pos=9:147804919;1allele=A/G;version=Hapmap2;RS=rs820475029;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154178443	154178542	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147806356;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154189624	154189723	.	+	.	Name=Height_above_ear;B73v2_pos=9:147817545;1allele=A/G;version=Hapmap1;RS=rs132563117;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154189626	154189725	.	+	.	Name=Height_above_ear;B73v2_pos=9:147817547;1allele=A/G;version=Hapmap1;RS=rs132563118;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154189626	154189725	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147817547;1allele=A/G;version=Hapmap1;RS=rs132563118;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154190005	154190104	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147817926;1allele=T/C;version=Hapmap2;RS=rs848984006;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154192131	154192230	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:147820052;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154270851	154270950	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147896470;1allele=TT/;version=Hapmap1;RS=rs132563181;2ref_allele=T;3alt_allele=TA
chr9	Wallace_2014	SNP	154280449	154280548	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:147905878;1allele=G/C;version=Hapmap2;RS=rs827688391;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	154281704	154281803	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147907133;1allele=A/G;version=Hapmap2;RS=rs1062985193;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154283455	154283554	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:147908181;1allele=G/A;version=Hapmap2;RS=rs1061147330;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154287386	154287485	.	+	.	Name=Height_above_ear;B73v2_pos=9:147912119;1allele=C/T;version=Hapmap2;RS=rs278836054;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154287495	154287594	.	+	.	Name=Height_above_ear;B73v2_pos=9:147912228;1allele=T/C;version=Hapmap2;RS=rs278836057;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154289499	154289599	.	+	.	Name=Leaf_width;B73v2_pos=9:147914883;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154334148	154334247	.	+	.	Name=Plant_height;B73v2_pos=9:147959734;1allele=T/C;version=Hapmap2;RS=rs801510553;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154335636	154335735	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147961222;1allele=G/T;version=Hapmap2;RS=rs839506085;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	154341249	154341348	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147966834;1allele=G/A;version=Hapmap2;RS=rs817203220;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154363151	154363250	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147988654;1allele=C/T;version=Hapmap2;RS=rs828625067;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154363151	154363250	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147988654;1allele=C/T;version=Hapmap2;RS=rs828625067;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154363155	154363254	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147988658;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154364229	154364328	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147989732;1allele=G/A;version=Hapmap2;RS=rs841819672;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154364235	154364334	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147989738;1allele=T/C;version=Hapmap2;RS=rs822184511;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154364240	154364339	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:147989743;1allele=T/C;version=Hapmap2;RS=rs824881449;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154364240	154364339	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:147989743;1allele=T/C;version=Hapmap2;RS=rs824881449;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154364240	154364339	.	+	.	Name=Plant_height;B73v2_pos=9:147989743;1allele=T/C;version=Hapmap2;RS=rs824881449;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154484732	154484831	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:148129996;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154571989	154572088	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:148196616;1allele=G/A;version=Hapmap2;RS=rs131162484;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	154575329	154575428	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:148199956;1allele=G/C;version=Hapmap1;RS=rs132563611;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	154575842	154575941	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:148200469;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154575842	154575941	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:148200469;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154577773	154577872	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:148202400;1allele=G/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154578265	154578364	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:148202892;1allele=T/G;version=Hapmap1;RS=rs132563662;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154578747	154578846	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:148203374;1allele=C/T;version=Hapmap2;RS=rs831711396;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154578747	154578846	.	+	.	Name=Plant_height;B73v2_pos=9:148203374;1allele=C/T;version=Hapmap2;RS=rs831711396;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154594517	154594616	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:148219143;1allele=G/C;version=Hapmap2;RS=rs810982416;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	154602873	154602972	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:148227499;1allele=G/A;version=Hapmap2;RS=rs815325576;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154856267	154856366	.	+	.	Name=Leaf_width;B73v2_pos=9:148368577;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	154857255	154857354	.	+	.	Name=Leaf_width;B73v2_pos=9:148369565;1allele=C/T;version=Hapmap1;RS=rs132563858;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	154860915	154861014	.	+	.	Name=Leaf_width;B73v2_pos=9:148373232;1allele=C/T;version=Hapmap2;RS=rs814675565;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	154891566	154891665	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=9:148444721;1allele=T/C;version=Hapmap1;RS=rs132563898;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	154894599	154894698	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:148447754;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	155251094	155251193	.	+	.	Name=Nodes_to_ear;B73v2_pos=9:148790990;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	155251984	155252083	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:148790100;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	155278675	155278774	.	+	.	Name=Height_above_ear;B73v2_pos=9:148827859;1allele=C/T;version=Hapmap2;RS=rs1063604686;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	155330149	155330248	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:148879205;1allele=C/T;version=Hapmap1;RS=rs848098115;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155330327	155330426	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:148879383;1allele=C/T;version=Hapmap1;RS=rs132564317;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155355011	155355110	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:148904073;1allele=C/T;version=Hapmap1;RS=rs132564358;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155366151	155366250	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:148915216;1allele=T/A;version=Hapmap2;RS=rs278837360;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	155367965	155368064	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:148917030;1allele=A/G;version=Hapmap2;RS=rs131163425;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	155455918	155456017	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:149003391;1allele=A/G;version=Hapmap2;RS=rs819086465;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	155456785	155456884	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=9:149004258;1allele=C/T;version=Hapmap2;RS=rs838707754;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155463608	155463707	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:149011084;1allele=G/A;version=Hapmap2;RS=rs278837467;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	155463608	155463707	.	+	.	Name=Height_above_ear;B73v2_pos=9:149011084;1allele=G/A;version=Hapmap2;RS=rs278837467;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	155463665	155463764	.	+	.	Name=Height_above_ear;B73v2_pos=9:149011141;1allele=G/A;version=Hapmap2;RS=rs278837468;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	155467581	155467680	.	+	.	Name=Height_above_ear;B73v2_pos=9:149015051;1allele=G/A;version=Hapmap1;RS=rs132564456;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	155487584	155487683	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:149038101;1allele=C/T;version=Hapmap2;RS=rs816761583;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155491492	155491591	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:149042009;1allele=G/A;version=Hapmap2;RS=rs131163615;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	155494346	155494445	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:149044221;1allele=A/G;version=Hapmap2;RS=rs824244552;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	155494514	155494613	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:149044389;1allele=C/T;version=Hapmap2;RS=rs845660464;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155512007	155512106	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:149061882;1allele=G/A;version=Hapmap2;RS=rs278837627;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	155512091	155512190	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:149061966;1allele=A/T;version=Hapmap2;RS=rs847738524;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	155697970	155698069	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:149244787;1allele=/TGTGA;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	155706343	155706442	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:149253160;1allele=C/T;version=Hapmap2;RS=rs803229139;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155722820	155722919	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:149269637;1allele=G/A;version=Hapmap2;RS=rs809203684;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	155819383	155819482	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:149359625;1allele=T/C;version=Hapmap2;RS=rs809914498;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	155842913	155843012	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=9:149383639;1allele=T/A;version=Hapmap2;RS=rs804508425;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	155843320	155843419	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:149384046;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	155844677	155844776	.	+	.	Name=Leaf_width;B73v2_pos=9:149385403;1allele=/CTG;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	155845469	155845568	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:149386195;1allele=T/C;version=Hapmap2;RS=rs829187337;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	155889922	155890021	.	+	.	Name=Height_above_ear;B73v2_pos=9:149429671;1allele=G/T;version=Hapmap2;RS=rs832053529;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	155903933	155904032	.	+	.	Name=Cob_diameter;B73v2_pos=9:149443360;1allele=C/T;version=Hapmap2;RS=rs831173048;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	155907684	155907783	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:154324680;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	156006134	156006233	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:149545672;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	156012851	156012950	.	+	.	Name=Height_above_ear;B73v2_pos=9:149552389;1allele=G/C;version=Hapmap1;RS=rs132565543;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	156013253	156013352	.	+	.	Name=Height_above_ear;B73v2_pos=9:149552791;1allele=C/G;version=Hapmap1;RS=rs132565549;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	156040557	156040656	.	+	.	Name=Height_above_ear;B73v2_pos=9:149580825;1allele=C/T;version=Hapmap2;RS=rs825629983;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	156214301	156214400	.	+	.	Name=Chlorophyll_B;B73v2_pos=9:149759953;1allele=C/T;version=Hapmap2;RS=rs132566178;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	156649222	156649321	.	+	.	Name=Tassel_length;B73v2_pos=9:150186564;1allele=G/A;version=Hapmap2;RS=rs833068178;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	156700510	156700609	.	+	.	Name=Cob_diameter;B73v2_pos=9:150237654;1allele=A/G;version=Hapmap2;RS=rs1063197565;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	156771474	156771573	.	+	.	Name=Cob_diameter;B73v2_pos=9:150308545;1allele=T/C;version=Hapmap1;RS=rs132566618;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	156834237	156834336	.	+	.	Name=Stalk_strength;B73v2_pos=9:150373411;1allele=G/A;version=Hapmap2;RS=rs821860462;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	157062174	157062273	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=8:6674028;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	157072235	157072334	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:150610433;1allele=A/T;version=Hapmap2;RS=rs829786186;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	157072550	157072649	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:150610748;1allele=G/A;version=Hapmap2;RS=rs833554286;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	157133545	157133644	.	+	.	Name=Nitrate;B73v2_pos=9:150669463;1allele=C/A;version=Hapmap2;RS=rs840960979;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	157276966	157277065	.	+	.	Name=Cob_diameter;B73v2_pos=9:150819848;1allele=A/C;version=Hapmap2;RS=rs131165541;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157285336	157285435	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:150828218;1allele=+/-;version=Hapmap2;RS=rs820093021;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157290454	157290553	.	+	.	Name=Cob_diameter;B73v2_pos=9:150833337;1allele=C/T;version=Hapmap2;RS=rs825814504;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	157329585	157329684	.	+	.	Name=Nitrate;B73v2_pos=9:150870225;1allele=A/G;version=Hapmap2;RS=rs834192283;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157568337	157568436	.	+	.	Name=Cob_diameter;B73v2_pos=9:151122198;1allele=C/A;version=Hapmap2;RS=rs726683521;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	157568375	157568474	.	+	.	Name=Cob_diameter;B73v2_pos=9:151122236;1allele=A/G;version=Hapmap2;RS=rs132567538;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157568647	157568746	.	+	.	Name=Cob_diameter;B73v2_pos=9:151122508;1allele=C/A;version=Hapmap1;RS=rs132567541;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	157587908	157588007	.	+	.	Name=Tassel_length;B73v2_pos=9:151141769;1allele=A/G;version=Hapmap2;RS=rs132567697;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157593860	157593959	.	+	.	Name=Ear_height;B73v2_pos=9:151147721;1allele=T/A;version=Hapmap2;RS=rs820920728;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	157753200	157753299	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:151307758;1allele=C/G;version=Hapmap2;RS=rs804471531;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	157753200	157753299	.	+	.	Name=Plant_height;B73v2_pos=9:151307758;1allele=C/G;version=Hapmap2;RS=rs804471531;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	157759852	157759951	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:151314410;1allele=A/G;version=Hapmap2;RS=rs812589652;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157844808	157844907	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151398533;1allele=A/G;version=Hapmap2;RS=rs818845756;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157846505	157846604	.	+	.	Name=Plant_height;B73v2_pos=9:151400230;1allele=G/A;version=Hapmap2;RS=rs278840695;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	157870434	157870533	.	+	.	Name=Leaf_width;B73v2_pos=9:151424161;1allele=A/G;version=Hapmap2;RS=rs823885584;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157871247	157871346	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151424974;1allele=C/T;version=Hapmap2;RS=rs844630420;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	157902635	157902734	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151461011;1allele=C/A;version=Hapmap2;RS=rs842405509;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	157976358	157976457	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:151543519;1allele=C/A;version=Hapmap2;RS=rs816810841;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	158051134	158051233	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151645569;1allele=C/G;version=Hapmap2;RS=rs278841007;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	158052416	158052515	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151646851;1allele=C/G;version=Hapmap2;RS=rs1061036720;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	158052757	158052856	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151647192;1allele=C/T;version=Hapmap2;RS=rs1063002039;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	158054945	158055044	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151649380;1allele=C/T;version=Hapmap2;RS=rs1063153794;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	158067872	158067971	.	+	.	Name=Tassel_length;B73v2_pos=9:151662307;1allele=G/C;version=Hapmap1;RS=rs132569640;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	158071502	158071601	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151665937;1allele=C/T;version=Hapmap2;RS=rs278841021;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	158071515	158071614	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151665950;1allele=G/A;version=Hapmap2;RS=rs132569691;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	158071528	158071627	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151665963;1allele=G/A;version=Hapmap2;RS=rs802247934;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	158071903	158072002	.	+	.	Name=Plant_height;B73v2_pos=9:151666338;1allele=G/A;version=Hapmap2;RS=rs131167166;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	158072007	158072106	.	+	.	Name=Plant_height;B73v2_pos=9:151666442;1allele=G/-;version=Hapmap1;RS=rs132569698;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	158091599	158091698	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151686031;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	158126692	158126791	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151721121;1allele=C/A;version=Hapmap2;RS=rs132569951;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	158126722	158126821	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:151721151;1allele=G/A;version=Hapmap1;RS=rs132569952;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	158169953	158170052	.	+	.	Name=Plant_height;B73v2_pos=9:151764201;1allele=T/A;version=Hapmap2;RS=rs278841170;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	158225447	158225546	.	+	.	Name=Plant_height;B73v2_pos=9:151811535;1allele=G/A;version=Hapmap2;RS=rs825653725;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	158448184	158448283	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:152047069;1allele=C/T;version=Hapmap2;RS=rs837617882;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	158538427	158538526	.	+	.	Name=Nitrate;B73v2_pos=9:152134296;1allele=-/+;version=Hapmap2;RS=rs132570806;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	158616848	158616947	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=9:152220512;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	158656005	158656104	.	+	.	Name=Plant_height;B73v2_pos=9:152258600;1allele=G/T;version=Hapmap2;RS=rs132571147;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	158666935	158667034	.	+	.	Name=Nodes_above_ear;B73v2_pos=9:152272431;1allele=A/G;version=Hapmap2;RS=rs810697924;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	158678443	158678542	.	+	.	Name=Nitrate;B73v2_pos=9:152283939;1allele=A/G;version=Hapmap2;RS=rs819307472;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	158697356	158697455	.	+	.	Name=Ear_height;B73v2_pos=9:152302896;1allele=C/G;version=Hapmap2;RS=rs827837403;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	158718472	158718571	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:152373949;1allele=T/G;version=Hapmap2;RS=rs841743297;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	158831777	158831876	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:152435755;1allele=A/T;version=Hapmap1;RS=rs132571305;2ref_allele=A;3alt_allele=T
chr9	Wallace_2014	SNP	158839154	158839253	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:152443132;1allele=G/A;version=Hapmap2;RS=rs278841963;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	158843900	158843999	.	+	.	Name=Plant_height;B73v2_pos=9:152447878;1allele=+/-;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	158886537	158886636	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:152490208;1allele=G/C;version=Hapmap2;RS=rs132571629;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	158908522	158908621	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:152512021;1allele=T/C;version=Hapmap2;RS=rs818827566;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	158928071	158928170	.	+	.	Name=Ear_height;B73v2_pos=9:152531554;1allele=T/C;version=Hapmap2;RS=rs829336371;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	159017142	159017241	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:152621430;1allele=C/T;version=Hapmap2;RS=rs823060750;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	159029383	159029482	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:152633673;1allele=A/G;version=Hapmap2;RS=rs1063007186;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	159030228	159030327	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=9:152634518;1allele=G/A;version=Hapmap2;RS=rs726171110;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	159072229	159072328	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:152676538;1allele=C/T;version=Hapmap2;RS=rs814567108;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	159152616	159152715	.	+	.	Name=Ear_height;B73v2_pos=9:152757802;1allele=C/G;version=Hapmap2;RS=rs132572116;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	159155044	159155143	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:152760230;1allele=C/T;version=Hapmap1;RS=rs132572168;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	159188260	159188359	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:152794058;1allele=ACGGGT/;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	159189436	159189535	.	+	.	Name=Tassel_length;B73v2_pos=9:152795234;1allele=G/C;version=Hapmap2;RS=rs837803314;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	159246005	159246104	.	+	.	Name=Plant_height;B73v2_pos=9:152862411;1allele=C/G;version=Hapmap2;RS=rs132572399;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	159420864	159420963	.	+	.	Name=Ear_height;B73v2_pos=9:153035564;1allele=/GC;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	159488751	159488850	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153141454;1allele=G/A;version=Hapmap2;RS=rs809217172;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	159556796	159556895	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153166636;1allele=T/C;version=Hapmap2;RS=rs278843088;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	159559045	159559144	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153168885;1allele=T/G;version=Hapmap2;RS=rs1060677433;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	159582033	159582132	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153191564;1allele=G/C;version=Hapmap2;RS=rs830427837;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	159582181	159582280	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153191712;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	159582192	159582291	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153191723;1allele=G/T;version=Hapmap2;RS=rs278843172;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	159607672	159607771	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153215423;1allele=G/A;version=Hapmap2;RS=rs833155954;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	159658771	159658870	.	+	.	Name=Plant_height;B73v2_pos=9:153265218;1allele=C/G;version=Hapmap2;RS=rs842010478;2ref_allele=C;3alt_allele=G
chr9	Wallace_2014	SNP	159706779	159706878	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:153310753;1allele=A/G;version=Hapmap2;RS=rs826524393;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	159708147	159708246	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:153312125;1allele=A/C;version=Hapmap2;RS=rs801444060;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	159708575	159708674	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:153312553;1allele=C/T;version=Hapmap2;RS=rs821884824;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	159768465	159768564	.	+	.	Name=Plant_height;B73v2_pos=9:153341729;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	159857653	159857752	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:153457608;1allele=T/C;version=Hapmap1;RS=rs132573337;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	159887250	159887349	.	+	.	Name=Tassel_length;B73v2_pos=9:153486126;1allele=G/A;version=Hapmap2;RS=rs847906267;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160070789	160070888	.	+	.	Name=Tassel_length;B73v2_pos=9:153669122;1allele=G/A;version=Hapmap2;RS=rs132574263;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160071017	160071116	.	+	.	Name=Tassel_length;B73v2_pos=9:153669350;1allele=C/A;version=Hapmap2;RS=rs823198181;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	160077296	160077395	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:153675629;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	160088579	160088678	.	+	.	Name=Plant_height;B73v2_pos=9:153690412;1allele=A/G;version=Hapmap2;RS=rs131170712;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	160163100	160163199	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:153776818;1allele=A/G;version=Hapmap1;RS=rs132574484;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	160163100	160163199	.	+	.	Name=Plant_height;B73v2_pos=9:153776818;1allele=A/G;version=Hapmap1;RS=rs132574484;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	160164098	160164197	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=9:153777816;1allele=T/C;version=Hapmap2;RS=rs810694411;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	160164395	160164494	.	+	.	Name=Nitrate;B73v2_pos=9:153778113;1allele=G/C;version=Hapmap2;RS=rs829428750;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	160166234	160166333	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:153779952;1allele=A/G;version=Hapmap2;RS=rs278844564;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	160173221	160173320	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:153786940;1allele=C/A;version=Hapmap2;RS=rs132574450;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	160175345	160175444	.	+	.	Name=Plant_height;B73v2_pos=9:153789064;1allele=A/G;version=Hapmap2;RS=rs825300013;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	160175345	160175444	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:153789064;1allele=A/G;version=Hapmap2;RS=rs825300013;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	160176918	160177017	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:153790637;1allele=C/T;version=Hapmap2;RS=rs848047862;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160207196	160207295	.	+	.	Name=Plant_height;B73v2_pos=9:153819413;1allele=+/-;version=Hapmap2;RS=rs831854577;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160207196	160207295	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:153819413;1allele=+/-;version=Hapmap2;RS=rs831854577;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160207881	160207980	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:153820098;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	160220527	160220626	.	+	.	Name=Plant_height;B73v2_pos=9:153832744;1allele=C/T;version=Hapmap2;RS=rs841471049;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160220546	160220645	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:153832763;1allele=C/A;version=Hapmap2;RS=rs819788142;2ref_allele=C;3alt_allele=A
chr9	Wallace_2014	SNP	160220948	160221047	.	+	.	Name=Plant_height;B73v2_pos=9:153833165;1allele=T/G;version=Hapmap2;RS=rs826966687;2ref_allele=T;3alt_allele=G
chr9	Wallace_2014	SNP	160221338	160221437	.	+	.	Name=Plant_height;B73v2_pos=9:153833555;1allele=A/C;version=Hapmap2;RS=rs131170921;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	160221338	160221437	.	+	.	Name=Nodes_per_plant;B73v2_pos=9:153833555;1allele=A/C;version=Hapmap2;RS=rs131170921;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	160236609	160236708	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:153848825;1allele=T/A;version=Hapmap1;RS=rs132575047;2ref_allele=T;3alt_allele=A
chr9	Wallace_2014	SNP	160242433	160242532	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:153854649;1allele=G/A;version=Hapmap2;RS=rs278844940;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160269112	160269211	.	+	.	Name=Nitrate;B73v2_pos=9:153881309;1allele=G/A;version=Hapmap2;RS=rs820507018;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160273129	160273228	.	+	.	Name=Days_to_silk;B73v2_pos=9:153885302;1allele=T/C;version=Hapmap2;RS=rs132575167;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	160273177	160273276	.	+	.	Name=Days_to_silk;B73v2_pos=9:153885350;1allele=T/C;version=Hapmap1;RS=rs132575169;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	160305562	160305661	.	+	.	Name=Plant_height;B73v2_pos=9:153917137;1allele=G/T;version=Hapmap2;RS=rs278845042;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	160331776	160331875	.	+	.	Name=Plant_height;B73v2_pos=9:153943220;1allele=A/G;version=Hapmap2;RS=rs823089898;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160334688	160334787	.	+	.	Name=Plant_height;B73v2_pos=9:153946132;1allele=T/C;version=Hapmap2;RS=rs131171251;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160345083	160345182	.	+	.	Name=Plant_height;B73v2_pos=9:153956528;1allele=C/T;version=Hapmap2;RS=rs814557334;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160407753	160407852	.	+	.	Name=Plant_height;B73v2_pos=9:154019199;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	160471329	160471428	.	+	.	Name=Days_to_anthesis;B73v2_pos=9:154083680;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	160471610	160471709	.	+	.	Name=Plant_height;B73v2_pos=9:154083961;1allele=C/T;version=Hapmap2;RS=rs847947617;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160472321	160472420	.	+	.	Name=Plant_height;B73v2_pos=9:154084672;1allele=A/C;version=Hapmap2;RS=rs840943946;2ref_allele=A;3alt_allele=C
chr9	Wallace_2014	SNP	160672206	160672305	.	+	.	Name=Plant_height;B73v2_pos=9:154239634;1allele=G/C;version=Hapmap2;RS=rs804798852;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160672206	160672305	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:154239634;1allele=G/C;version=Hapmap2;RS=rs804798852;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160672206	160672305	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:154239634;1allele=G/C;version=Hapmap2;RS=rs804798852;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	160687318	160687417	.	+	.	Name=Plant_height;B73v2_pos=5:9213798;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	160733596	160733695	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:154337922;1allele=T/G;version=Hapmap2;RS=rs278846050;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	160791119	160791218	.	+	.	Name=Tassel_length;B73v2_pos=9:154394681;1allele=-/+;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	160836208	160836307	.	+	.	Name=Tassel_length;B73v2_pos=9:154439769;1allele=G/A;version=Hapmap2;RS=rs836474517;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160911715	160911814	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:154515286;1allele=T/C;version=Hapmap2;RS=rs821743400;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	160915064	160915163	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:154518635;1allele=G/A;version=Hapmap2;RS=rs835027214;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	160946776	160946875	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=9:154550441;1allele=G/C;version=Hapmap2;RS=rs727270276;2ref_allele=G;3alt_allele=C
chr9	Wallace_2014	SNP	160946809	160946908	.	+	.	Name=Plant_height;B73v2_pos=9:154550474;1allele=A/G;version=Hapmap2;RS=rs808504536;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	160975721	160975820	.	+	.	Name=Tassel_length;B73v2_pos=9:154575421;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	161012559	161012658	.	+	.	Name=Tassel_length;B73v2_pos=9:154613015;1allele=G/A;version=Hapmap2;RS=rs278847253;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	161022576	161022675	.	+	.	Name=Plant_height;B73v2_pos=9:154623040;1allele=C/T;version=Hapmap2;RS=rs847294333;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	161040683	161040782	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=9:154641156;1allele=C/T;version=Hapmap2;RS=rs822003923;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	161136341	161136440	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:154727040;1allele=T/C;version=Hapmap2;RS=rs826356919;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	161194916	161195015	.	+	.	Name=Plant_height;B73v2_pos=9:154757525;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	161322227	161322326	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:154948787;1allele=C/T;version=Hapmap2;RS=rs278847996;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	161488875	161488974	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:155174927;1allele=G/A;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	161500720	161500819	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155186772;1allele=A/G;version=Hapmap2;RS=rs726389965;2ref_allele=A;3alt_allele=G
chr9	Wallace_2014	SNP	161507203	161507302	.	+	.	Name=Tassel_length;B73v2_pos=9:155193255;1allele=G/T;version=Hapmap2;RS=rs846193324;2ref_allele=G;3alt_allele=T
chr9	Wallace_2014	SNP	161520677	161520776	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155206742;1allele=T/C;version=Hapmap2;RS=rs813335136;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	161524395	161524494	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155210461;1allele=C/T;version=Hapmap2;RS=rs808529784;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	161529828	161529927	.	+	.	Name=Plant_height;B73v2_pos=9:155215922;1allele=C/T;version=Hapmap2;RS=rs724187040;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	161563119	161563218	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155249308;1allele=T/C;version=Hapmap2;RS=rs726367941;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	161574510	161574609	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155260198;1allele=T/C;version=Hapmap2;RS=rs803145044;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	161576475	161576574	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155262163;1allele=C/T;version=Hapmap2;RS=rs278848318;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	161576800	161576899	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155262488;1allele=C/T;version=Hapmap2;RS=rs278848326;2ref_allele=T;3alt_allele=C
chr9	Wallace_2014	SNP	161576990	161577089	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155262678;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
chr9	Wallace_2014	SNP	161588338	161588437	.	+	.	Name=Plant_height;B73v2_pos=9:155274021;1allele=G/A;version=Hapmap2;RS=rs840737945;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	161781784	161781883	.	+	.	Name=100_Kernel_weight;B73v2_pos=9:155474612;1allele=G/A;version=Hapmap2;RS=rs278848804;2ref_allele=G;3alt_allele=A
chr9	Wallace_2014	SNP	161860910	161861009	.	+	.	Name=Plant_height;B73v2_pos=9:155566695;1allele=C/T;version=Hapmap2;RS=rs132577382;2ref_allele=C;3alt_allele=T
chr9	Wallace_2014	SNP	161893717	161893815	.	+	.	Name=Tassel_branch_number;B73v2_pos=9:155596847;1allele=G/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_145	Wallace_2014	SNP	43502	43601	.	+	.	Name=Ear_height;B73v2_pos=4:185318900;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_145	Wallace_2014	SNP	50355	50454	.	+	.	Name=Nitrate;B73v2_pos=4:21722694;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_179	Wallace_2014	SNP	12341	12440	.	+	.	Name=Starch;B73v2_pos=7:167486975;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_187	Wallace_2014	SNP	4178	4277	.	+	.	Name=Protein;B73v2_pos=6:69851611;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_192	Wallace_2014	SNP	1211	1310	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=9:28975045;1allele=T/C;version=Hapmap2;RS=rs1063455655;2ref_allele=C;3alt_allele=T
scaf_192	Wallace_2014	SNP	72519	72618	.	+	.	Name=Plant_height;B73v2_pos=4:79567770;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_192	Wallace_2014	SNP	72519	72618	.	+	.	Name=Height_above_ear;B73v2_pos=4:79567770;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_196	Wallace_2014	SNP	1418	1517	.	+	.	Name=Ear_row_number;B73v2_pos=6:152349576;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_196	Wallace_2014	SNP	60799	60898	.	+	.	Name=Days_to_anthesis;B73v2_pos=5:203908816;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_218	Wallace_2014	SNP	30909	31008	.	+	.	Name=Nodes_per_plant;B73v2_pos=8:121019718;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_22	Wallace_2014	SNP	177320	177419	.	+	.	Name=Southern_leaf_blight;B73v2_pos=7:88262742;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_221	Wallace_2014	SNP	73404	73503	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=10:137995442;1allele=C/G;version=Hapmap2;RS=rs808659013;2ref_allele=C;3alt_allele=G
scaf_228	Wallace_2014	SNP	39363	39462	.	+	.	Name=Malate;B73v2_pos=7:172634500;1allele=7;version=CNV_CNVnator;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_231	Wallace_2014	SNP	77798	77897	.	+	.	Name=Cob_diameter;B73v2_pos=3:207540949;1allele=T/C;version=Hapmap2;RS=rs846149000;2ref_allele=T;3alt_allele=C
scaf_234	Wallace_2014	SNP	59608	59707	.	+	.	Name=Ear_height;B73v2_pos=5:153198886;1allele=T/G;version=Hapmap2;RS=rs830143137;2ref_allele=T;3alt_allele=G
scaf_24	Wallace_2014	SNP	239383	239482	.	+	.	Name=Nitrate;B73v2_pos=4:237822992;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_243	Wallace_2014	SNP	25810	25909	.	+	.	Name=Leaf_width;B73v2_pos=8:117899741;1allele=T/A;version=Hapmap2;RS=rs834273137;2ref_allele=T;3alt_allele=A
scaf_243	Wallace_2014	SNP	68484	68583	.	+	.	Name=Plant_height;B73v2_pos=8:117877372;1allele=T/C;version=Hapmap2;RS=rs826033596;2ref_allele=T;3alt_allele=C
scaf_243	Wallace_2014	SNP	71107	71206	.	+	.	Name=Leaf_length;B73v2_pos=8:117874747;1allele=G/A;version=Hapmap2;RS=rs132461730;2ref_allele=G;3alt_allele=A
scaf_249	Wallace_2014	SNP	2101	2200	.	+	.	Name=Days_to_anthesis;B73v2_pos=4:3398680;1allele=T/A;version=Hapmap2;RS=rs833788901;2ref_allele=T;3alt_allele=A
scaf_249	Wallace_2014	SNP	4136	4235	.	+	.	Name=Southern_leaf_blight;B73v2_pos=4:3396647;1allele=C/T;version=Hapmap2;RS=rs277313385;2ref_allele=T;3alt_allele=C
scaf_270	Wallace_2014	SNP	37154	37253	.	+	.	Name=Tassel_length;B73v2_pos=9:120569195;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_270	Wallace_2014	SNP	37527	37626	.	+	.	Name=Nodes_above_ear;B73v2_pos=5:100048181;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_288	Wallace_2014	SNP	14919	15018	.	+	.	Name=Starch;B73v2_pos=1:5670647;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_288	Wallace_2014	SNP	48958	49057	.	+	.	Name=Protein;B73v2_pos=3:207558285;1allele=G/A;version=Hapmap1;RS=rs129381264;2ref_allele=G;3alt_allele=T
scaf_288	Wallace_2014	SNP	57119	57218	.	+	.	Name=Tassel_length;B73v2_pos=3:207550125;1allele=G/A;version=Hapmap2;RS=rs830672133;2ref_allele=G;3alt_allele=A
scaf_288	Wallace_2014	SNP	57799	57898	.	+	.	Name=Leaf_width;B73v2_pos=3:207549443;1allele=G/A;version=Hapmap2;RS=rs849808071;2ref_allele=G;3alt_allele=A
scaf_307	Wallace_2014	SNP	22665	22764	.	+	.	Name=Ear_row_number;B73v2_pos=1:292115609;1allele=G/A;version=Hapmap2;RS=rs1062205504;2ref_allele=A;3alt_allele=G
scaf_307	Wallace_2014	SNP	33869	33968	.	+	.	Name=Stalk_strength;B73v2_pos=6:161964410;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_307	Wallace_2014	SNP	50543	50642	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:292090231;1allele=A/G;version=Hapmap2;RS=rs843402673;2ref_allele=A;3alt_allele=G
scaf_307	Wallace_2014	SNP	51073	51172	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:292089700;1allele=T/A;version=Hapmap2;RS=rs276583393;2ref_allele=T;3alt_allele=A
scaf_307	Wallace_2014	SNP	51124	51223	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=1:292089649;1allele=T/A;version=Hapmap2;RS=rs803974129;2ref_allele=T;3alt_allele=A
scaf_316	Wallace_2014	SNP	1804	1903	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:219397160;1allele=G/A;version=Hapmap2;RS=rs812490066;2ref_allele=G;3alt_allele=A
scaf_316	Wallace_2014	SNP	22987	23086	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=3:219376044;1allele=C/T;version=Hapmap2;RS=rs277287659;2ref_allele=C;3alt_allele=T
scaf_32	Wallace_2014	SNP	113820	113919	.	+	.	Name=Chlorophyll_B;B73v2_pos=4:159713073;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_32	Wallace_2014	SNP	134499	134598	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=2:116194776;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_327	Wallace_2014	SNP	39048	39147	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:72770250;1allele=9;version=CNV_CNVnator;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_355	Wallace_2014	SNP	46498	46597	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=7:91503975;1allele=C/A;version=Hapmap2;RS=rs278299612;2ref_allele=C;3alt_allele=A
scaf_355	Wallace_2014	SNP	51508	51607	.	+	.	Name=Leaf_width;B73v2_pos=7:91498970;1allele=G/A;version=Hapmap2;RS=rs278299553;2ref_allele=G;3alt_allele=A
scaf_360	Wallace_2014	SNP	14589	14688	.	+	.	Name=Stalk_strength;B73v2_pos=3:170392275;1allele=G/A;version=Hapmap2;RS=rs828251986;2ref_allele=G;3alt_allele=A
scaf_360	Wallace_2014	SNP	54700	54799	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:170422759;1allele=A/G;version=Hapmap1;RS=rs132056629;2ref_allele=A;3alt_allele=G
scaf_360	Wallace_2014	SNP	57049	57148	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:170425109;1allele=C/G;version=Hapmap1;RS=rs132056698;2ref_allele=C;3alt_allele=G
scaf_37	Wallace_2014	SNP	85091	85190	.	+	.	Name=Starch;B73v2_pos=1:52171105;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_386	Wallace_2014	SNP	6685	6784	.	+	.	Name=Tassel_length;B73v2_pos=3:226774263;1allele=C/G;version=Hapmap2;RS=rs129271093;2ref_allele=C;3alt_allele=T
scaf_386	Wallace_2014	SNP	6948	7047	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:226774526;1allele=A/C;version=Hapmap2;RS=rs831399228;2ref_allele=A;3alt_allele=C
scaf_386	Wallace_2014	SNP	6948	7047	.	+	.	Name=Ear_height;B73v2_pos=3:226774526;1allele=A/C;version=Hapmap2;RS=rs831399228;2ref_allele=A;3alt_allele=C
scaf_386	Wallace_2014	SNP	6948	7047	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:226774526;1allele=A/C;version=Hapmap2;RS=rs831399228;2ref_allele=A;3alt_allele=C
scaf_386	Wallace_2014	SNP	34927	35026	.	+	.	Name=Ear_height;B73v2_pos=3:226802505;1allele=C/T;version=Hapmap2;RS=rs828424638;2ref_allele=C;3alt_allele=T
scaf_386	Wallace_2014	SNP	47767	47866	.	+	.	Name=Northern_Leaf_Blight;B73v2_pos=3:226815345;1allele=T/C;version=Hapmap2;RS=rs129306779;2ref_allele=T;3alt_allele=C
scaf_386	Wallace_2014	SNP	56059	56158	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:226823616;1allele=-/+;version=Hapmap2;RS=rs132120600;2ref_allele=G;3alt_allele=A
scaf_397	Wallace_2014	SNP	39965	40064	.	+	.	Name=Photoperiod_growing-degree_days_to_anthesis;B73v2_pos=9:22969253;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_420	Wallace_2014	SNP	2719	2818	.	+	.	Name=Height_above_ear;B73v2_pos=3:183897043;1allele=T/G;version=Hapmap2;RS=rs277227047;2ref_allele=T;3alt_allele=G
scaf_420	Wallace_2014	SNP	4199	4298	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:183895564;1allele=G/A;version=Hapmap2;RS=rs129503147;2ref_allele=A;3alt_allele=G
scaf_420	Wallace_2014	SNP	10156	10255	.	+	.	Name=Nodes_above_ear;B73v2_pos=3:183889605;1allele=G/C;version=Hapmap2;RS=rs277227000;2ref_allele=C;3alt_allele=G
scaf_420	Wallace_2014	SNP	11268	11367	.	+	.	Name=Leaf_width;B73v2_pos=3:183888493;1allele=C/T;version=Hapmap2;RS=rs129322702;2ref_allele=C;3alt_allele=T
scaf_420	Wallace_2014	SNP	15125	15224	.	+	.	Name=Ear_height;B73v2_pos=3:183884401;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_420	Wallace_2014	SNP	16425	16524	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:183883101;1allele=G/A;version=Hapmap1;RS=rs132071558;2ref_allele=G;3alt_allele=C
scaf_420	Wallace_2014	SNP	17080	17179	.	+	.	Name=Ear_height;B73v2_pos=3:183882446;1allele=A/T;version=Hapmap2;RS=rs1063449607;2ref_allele=T;3alt_allele=A
scaf_420	Wallace_2014	SNP	17104	17203	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:183882422;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_420	Wallace_2014	SNP	17250	17349	.	+	.	Name=Leaf_width;B73v2_pos=3:183882276;1allele=T/G;version=Hapmap2;RS=rs277226947;2ref_allele=T;3alt_allele=G
scaf_420	Wallace_2014	SNP	17773	17872	.	+	.	Name=Height_above_ear;B73v2_pos=3:183881753;1allele=C/T;version=Hapmap2;RS=rs132071536;2ref_allele=C;3alt_allele=T
scaf_420	Wallace_2014	SNP	18879	18978	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=3:183880647;1allele=C/A;version=Hapmap2;RS=rs815381250;2ref_allele=C;3alt_allele=A
scaf_420	Wallace_2014	SNP	19727	19826	.	+	.	Name=Height_above_ear;B73v2_pos=3:183879803;1allele=C/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_420	Wallace_2014	SNP	19838	19937	.	+	.	Name=Height_above_ear;B73v2_pos=3:183879692;1allele=C/G;version=Hapmap2;RS=rs827491109;2ref_allele=G;3alt_allele=T
scaf_420	Wallace_2014	SNP	21188	21287	.	+	.	Name=Height_above_ear;B73v2_pos=3:183878342;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_420	Wallace_2014	SNP	23974	24073	.	+	.	Name=Height_above_ear;B73v2_pos=3:183875555;1allele=T/G;version=Hapmap2;RS=rs277226927;2ref_allele=T;3alt_allele=G
scaf_420	Wallace_2014	SNP	36454	36553	.	+	.	Name=Height_above_ear;B73v2_pos=3:183863097;1allele=T/G;version=Hapmap2;RS=rs129369156;2ref_allele=T;3alt_allele=G
scaf_420	Wallace_2014	SNP	39039	39138	.	+	.	Name=Height_above_ear;B73v2_pos=3:183860512;1allele=G/A;version=Hapmap2;RS=rs277226873;2ref_allele=G;3alt_allele=A
scaf_420	Wallace_2014	SNP	50913	51012	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:183848628;1allele=C/T;version=Hapmap2;RS=rs129445396;2ref_allele=C;3alt_allele=T
scaf_420	Wallace_2014	SNP	51551	51650	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:183847990;1allele=T/C;version=Hapmap2;RS=rs806023007;2ref_allele=T;3alt_allele=C
scaf_420	Wallace_2014	SNP	51592	51691	.	+	.	Name=Tassel_branch_number;B73v2_pos=3:183847949;1allele=C/T;version=Hapmap2;RS=rs277226844;2ref_allele=C;3alt_allele=T
scaf_420	Wallace_2014	SNP	52330	52429	.	+	.	Name=Nodes_to_ear;B73v2_pos=3:183847211;1allele=C/G;version=Hapmap2;RS=rs726765668;2ref_allele=C;3alt_allele=G
scaf_420	Wallace_2014	SNP	52609	52708	.	+	.	Name=Height_above_ear;B73v2_pos=3:183846932;1allele=C/T;version=Hapmap2;RS=rs847267416;2ref_allele=C;3alt_allele=T
scaf_425	Wallace_2014	SNP	5291	5390	.	+	.	Name=Leaf_length;B73v2_pos=10:148340841;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_43	Wallace_2014	SNP	134650	134749	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:4851104;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_43	Wallace_2014	SNP	134655	134754	.	+	.	Name=100_Kernel_weight;B73v2_pos=3:4851099;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_43	Wallace_2014	SNP	135291	135390	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=8:171663937;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_434	Wallace_2014	SNP	29931	30030	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=6:108648234;1allele=T/G;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_488	Wallace_2014	SNP	21575	21674	.	+	.	Name=Average_internode_length_(above_ear);B73v2_pos=10:144707534;1allele=C/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_489	Wallace_2014	SNP	3072	3171	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:118900673;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_494	Wallace_2014	SNP	27693	27792	.	+	.	Name=Leaf_length;B73v2_pos=1:7605391;1allele=C/A;version=Hapmap2;RS=rs818805730;2ref_allele=C;3alt_allele=A
scaf_494	Wallace_2014	SNP	32419	32518	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:7600664;1allele=A/C;version=Hapmap2;RS=rs1064199921;2ref_allele=A;3alt_allele=C
scaf_494	Wallace_2014	SNP	32834	32933	.	+	.	Name=Nodes_above_ear;B73v2_pos=1:7600249;1allele=C/T;version=Hapmap2;RS=rs818698554;2ref_allele=C;3alt_allele=T
scaf_503	Wallace_2014	SNP	23915	24014	.	+	.	Name=Southern_leaf_blight;B73v2_pos=8:172051942;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_512	Wallace_2014	SNP	29840	29939	.	+	.	Name=Southern_leaf_blight;B73v2_pos=3:127485402;1allele=C/T;version=Hapmap2;RS=rs277150192;2ref_allele=C;3alt_allele=T
scaf_512	Wallace_2014	SNP	30686	30785	.	+	.	Name=PCA_of_metabolites:_PC2;B73v2_pos=3:127486248;1allele=G/A;version=Hapmap2;RS=rs277150200;2ref_allele=G;3alt_allele=A
scaf_512	Wallace_2014	SNP	46081	46180	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=3:127501644;1allele=-/+;version=Hapmap2;RS=rs837123359;2ref_allele=C;3alt_allele=A
scaf_513	Wallace_2014	SNP	13803	13902	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:276962098;1allele=C/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_513	Wallace_2014	SNP	35625	35724	.	+	.	Name=Tassel_length;B73v2_pos=1:276940309;1allele=T/G;version=Hapmap2;RS=rs128957736;2ref_allele=T;3alt_allele=G
scaf_513	Wallace_2014	SNP	35658	35757	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=1:276940276;1allele=C/T;version=Hapmap2;RS=rs128957735;2ref_allele=C;3alt_allele=T
scaf_519	Wallace_2014	SNP	47109	47208	.	+	.	Name=Nitrate;B73v2_pos=1:225016380;1allele=G/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_522	Wallace_2014	SNP	37980	38079	.	+	.	Name=Total_amino_acids;B73v2_pos=5:64897487;1allele=G/T;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_524	Wallace_2014	SNP	43172	43271	.	+	.	Name=Southern_leaf_blight;B73v2_pos=9:139919617;1allele=T/C;version=Hapmap1;RS=rs132552041;2ref_allele=T;3alt_allele=C
scaf_530	Wallace_2014	SNP	24231	24330	.	+	.	Name=Boxcox-transformed_leaf_angle;B73v2_pos=3:159084400;1allele=A/G;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_539	Wallace_2014	SNP	44837	44936	.	+	.	Name=Cob_diameter;B73v2_pos=10:141959357;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_554	Wallace_2014	SNP	14473	14572	.	+	.	Name=Ratio_of_ear_height_to_total_height;B73v2_pos=3:45260196;1allele=T/C;version=Hapmap2;RS=rs843776256;2ref_allele=T;3alt_allele=C
scaf_554	Wallace_2014	SNP	14900	14999	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:45260624;1allele=T/C;version=Hapmap2;RS=rs1061862608;2ref_allele=T;3alt_allele=C
scaf_554	Wallace_2014	SNP	20001	20100	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:45265724;1allele=+/-;version=Hapmap2;RS=rs277021959;2ref_allele=C;3alt_allele=T
scaf_554	Wallace_2014	SNP	20268	20367	.	+	.	Name=Average_internode_length_(whole_plant);B73v2_pos=3:45265991;1allele=T/C;version=Hapmap2;RS=rs814023269;2ref_allele=T;3alt_allele=C
scaf_554	Wallace_2014	SNP	21117	21216	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:45266840;1allele=C/T;version=Hapmap2;RS=rs836216447;2ref_allele=C;3alt_allele=T
scaf_573	Wallace_2014	SNP	37948	38047	.	+	.	Name=Starch;B73v2_pos=2:24213339;1allele=T/C;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_582	Wallace_2014	SNP	13456	13555	.	+	.	Name=Starch;B73v2_pos=9:139903267;1allele=C/A;version=Hapmap2;RS=rs826236636;2ref_allele=C;3alt_allele=A
scaf_582	Wallace_2014	SNP	24355	24454	.	+	.	Name=Tassel_length;B73v2_pos=5:173184382;1allele=A/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_605	Wallace_2014	SNP	34850	34949	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:99615693;1allele=T/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_608	Wallace_2014	SNP	6438	6537	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219364320;1allele=C/G;version=Hapmap2;RS=rs842749364;2ref_allele=C;3alt_allele=G
scaf_608	Wallace_2014	SNP	6448	6547	.	+	.	Name=Days_to_anthesis;B73v2_pos=3:219364310;1allele=A/G;version=Hapmap2;RS=rs840250803;2ref_allele=A;3alt_allele=G
scaf_621	Wallace_2014	SNP	36221	36320	.	+	.	Name=100_Kernel_weight;B73v2_pos=6:160772980;1allele=T/C;version=Hapmap1;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_640	Wallace_2014	SNP	24490	24589	.	+	.	Name=Tassel_branch_number;B73v2_pos=1:10816617;1allele=T/C;version=Hapmap2;RS=rs809608761;2ref_allele=T;3alt_allele=C
scaf_644	Wallace_2014	SNP	16796	16895	.	+	.	Name=Starch;B73v2_pos=1:286978118;1allele=G/T;version=Hapmap2;RS=rs811409771;2ref_allele=G;3alt_allele=T
scaf_644	Wallace_2014	SNP	33397	33496	.	+	.	Name=Days_to_anthesis;B73v2_pos=1:286993738;1allele=G/A;version=Hapmap1;RS=rs131910173;2ref_allele=G;3alt_allele=A
scaf_674	Wallace_2014	SNP	4513	4612	.	+	.	Name=Height_per_day_(until_flowering);B73v2_pos=1:10845408;1allele=G/T;version=Hapmap2;RS=rs131207206;2ref_allele=G;3alt_allele=T
scaf_674	Wallace_2014	SNP	4513	4612	.	+	.	Name=Plant_height;B73v2_pos=1:10845408;1allele=G/T;version=Hapmap2;RS=rs131207206;2ref_allele=G;3alt_allele=T
scaf_674	Wallace_2014	SNP	4557	4656	.	+	.	Name=Height_above_ear;B73v2_pos=1:10845364;1allele=G/A;version=Hapmap1;RS=rs128373092;2ref_allele=G;3alt_allele=C
scaf_674	Wallace_2014	SNP	5753	5852	.	+	.	Name=Cob_diameter;B73v2_pos=1:10844168;1allele=C/G;version=Hapmap2;RS=rs839116151;2ref_allele=C;3alt_allele=G
scaf_674	Wallace_2014	SNP	8554	8653	.	+	.	Name=Average_internode_length_(below_ear);B73v2_pos=1:10841365;1allele=G/C;version=Hapmap2;RS=rs726188567;2ref_allele=G;3alt_allele=C
scaf_674	Wallace_2014	SNP	26500	26599	.	+	.	Name=Plant_height;B73v2_pos=1:10824733;1allele=G/A;version=Hapmap2;RS=rs831725410;2ref_allele=G;3alt_allele=A
scaf_68	Wallace_2014	SNP	35950	36049	.	+	.	Name=Stalk_strength;B73v2_pos=1:282056026;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_692	Wallace_2014	SNP	3627	3726	.	+	.	Name=Ear_height;B73v2_pos=7:142125500;1allele=7;version=CNV_CNVnator;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_692	Wallace_2014	SNP	4624	4723	.	+	.	Name=Malate;B73v2_pos=7:172629750;1allele=7;version=CNV_CNVnator;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_692	Wallace_2014	SNP	16607	16706	.	+	.	Name=Nodes_above_ear;B73v2_pos=6:165904250;1allele=6;version=CNV_CNVnator;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_692	Wallace_2014	SNP	16865	16964	.	+	.	Name=Anthesis-silking_interval;B73v2_pos=7:3951250;1allele=7;version=CNV_CNVnator;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_75	Wallace_2014	SNP	96811	96910	.	+	.	Name=Chlorophyll_B;B73v2_pos=7:4044061;1allele=G/A;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA
scaf_90	Wallace_2014	SNP	95708	95806	.	+	.	Name=Tassel_branch_number;B73v2_pos=2:25903264;1allele=C/T;version=Hapmap2;RS=NA;2ref_allele=NA;3alt_allele=NA